Psyllid ID: psy16830

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710--
Protein Sequence
MAPTNTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKISGKLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHEEEEEEcccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccEcccccccEcccccccHHHEEEEccccccccccccccccEEccccccccccccccccccEcccccHHEHEEEccccccccccccccEEcccccHHEHEEEcccccccccccccEEccccHHHHHHHHccccccccccccccEEcccccHHEEEEEEccccccccccccccccccccEccccHHHHHHHHcccccccccccccccEcccccHHHHHHHcccccccccccccccHHEHccccccccccccccccEccccHHHEHEHEcccccccccccccccEccccHHHHHHHHHcccccccccccccccEcccccHHEHEHHcccccccccccccccEcccccHHHHHHHccccccccccccccccccEccccHHHHHHHHccccccccccccccEEcccccHHHEEEEEcccccccccccccccEEEcccccccccccccccEcccccHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHEccccccccccccEccccccEEcccccHHEHEHEcccccccccccccccEcccccHHHEEEEEEccccccEcccccccEEEcccccccEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
MAPTNTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKISGKLSHETEARTHklnekeesttkkkvnthgaskenvalnkpfkcddcdqcflTKILLNKHKllhteghltcnlcgQTFRQKFRLLNHMishstekpfscpickkqfkrkhevskhdrivhqgkkynvyksykcslcpkaFTHLAALedhqyvhtgqkshmcnlcsarfTCKGALLGHIKVLhegykrpqescqsshesktcsvdeinkeneegatirkvkphedskeymalnkpfkcddcfqcFLSKILLNQHKKqmhfnkggftcnscglifsEKKYLRNhmishstqkpfscslcgkrfkrengvinhqrLHQTKKVYKsykcslcprvFTHLAAledhqfvhtgqktrlctMCPAIFASIGGLRSHMKIVHhglktqqscqsshesktcsvdeinkeneegatirkvkphedskeymalnkpfkcddcdqRFLTKILLNKHkllhfdkdyfscnycgktflhkYKLRRHIVIhstarpfscpvckkqfkrkqdvaghdrvvhqGKKLIVYKsykcslcpkaftylgaledhqfvhtgqkthlctmcpasyatigglRSHIKIVHHglktqqscqsshesktcsvdeinkeneegatirkvkphedskeymalnkpfkcddcdqRFLTKILLNKHkllhfdkdyfscnycgktf
Flexible Loop (DISEMBL)
MAPTNTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQllettneklnerkilvwkkisgklshetearthklnekeesttkkkvnthgaskenvalnkpfkCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMIShstekpfscpiCKKQFKrkhevskhdrivhqgkkynVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKrpqescqsshesktcsvdeinkeneegatirkvkphedSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMIShstqkpfscsLCGKRFKRengvinhqrlhqtkkvYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLktqqscqsshesktcsvdeinkeneegatirkvkphedsKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHstarpfscpvcKKQFKrkqdvaghdrvvhqgkkliVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLktqqscqsshesktcsvdeinkeneegatirkvkphedsKEYMALNKPFKCDDCDQRFLTKILLNkhkllhfdkdyfscnycgKTF
Low Complexity Region (SEG)
MAPTNTllvvfflfvlkhvlvevvlqvfvgvvDAQLLETTNEKLNERKILVWKKISGKLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Disordered region (IsUnstruct)
*****TLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKIS***********************************VALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGY******************************************YMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGL*****************************************YMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL*****************************************YMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCG***
Disordered Region (DISOPRED)
*A*TN*LLVVFFLFVLKHVLVEVVLQVFVGVV*************************************LNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Disordered Region (DISEMBL)
MAPTNTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKISGKL****************************SKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQ***********RIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGY******************DEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHG*****************VDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKK***********DRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG*****************VDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Disordered Region (DISPRO)
****NTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKISGKLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPTNTLLVVFFLFVLKHVLVEVVLQVFVGVVDAQLLETTNEKLNERKILVWKKISGKLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	712	2.2.26 [Sep-21-2011]
A6NN14	1173	Zinc finger protein 729 O	yes	N/A	0.771	0.468	0.307	6e-72
A8MXY4	1036	Zinc finger protein 99 OS	no	N/A	0.792	0.544	0.305	9e-69
O43345	1167	Zinc finger protein 208 O	no	N/A	0.856	0.522	0.299	1e-67
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.748	0.569	0.285	1e-66
Q8N4W9	903	Zinc finger protein 808 O	no	N/A	0.785	0.619	0.311	2e-66
Q96IR2	970	Zinc finger protein 845 O	no	N/A	0.793	0.582	0.303	2e-66
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.793	0.474	0.295	4e-66
Q08AN1	781	Zinc finger protein 616 O	no	N/A	0.752	0.686	0.292	2e-65
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.764	0.809	0.297	3e-65
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.689	0.463	0.313	8e-65

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  272 bits (696), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 197/640 (30%), Positives = 293/640 (45%), Gaps = 91/640 (14%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KP+KC++C + F +   L KHK++HT E    C  CG+ FRQ   L  H   H+ EKP+ 
Sbjct: 430  KPYKCEECGKAFNSSSTLMKHKIIHTGEKPYKCEECGKAFRQSSHLTRHKAIHTGEKPYK 489

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C K F    ++ +H +I+H GKK      YKC  C KAF+  + L +HQ +HTG+K 
Sbjct: 490  CEECGKAFNHFSDLRRH-KIIHTGKK-----PYKCEECGKAFSQSSTLRNHQIIHTGEKP 543

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
            + C  C   F     L  H KV+H G              K C  +E  K  +  + +RK
Sbjct: 544  YKCEECGKAFKWSSKLTVH-KVIHTG-------------EKPCKCEECGKAFKHFSALRK 589

Query: 275  VKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKY 334
                   K      K +KC++C + F +  +L +HK  +H  K  + C  CG  F +  +
Sbjct: 590  ------HKVIHTREKLYKCEECGKAFNNSSILAKHK-IIHTGKKPYKCEECGKAFRQSSH 642

Query: 335  LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
            L  H   H+ +KP+ C  CGK F   + +  H+ +H  KK    YKC  C + F+H +AL
Sbjct: 643  LTRHKAIHTGEKPYKCEECGKAFSHFSALRRHKIIHTGKK---PYKCEECGKAFSHFSAL 699

Query: 395  EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEIN 454
              H+ +HTG+K   C  C   F     L  H K++H               K C  +E  
Sbjct: 700  RRHKIIHTGEKPYKCEECGKAFKWSSKLTVH-KVIHTA------------EKPCKCEECG 746

Query: 455  KENEEGATIRKVKP-HEDSKEYM------ALN---------------KPFKCDDCDQRFL 492
            K  +  + +RK K  H   K Y       A N               KP+KC++C + F 
Sbjct: 747  KSFKHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKHKVIHTGEKPYKCEECGKAFK 806

Query: 493  TKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQD 552
                L  HK++H  +    C  CGK F H   LR+H +IH+  +P+ C  C K F +   
Sbjct: 807  WSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKAFHQSSK 866

Query: 553  VAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATI 612
            +A H ++ H G+K      YKC  C KAF  L  L  H+ +HTG+K + C  C  ++   
Sbjct: 867  LAKHKKI-HTGEK-----PYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFNQS 920

Query: 613  GGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALN 672
              L +H K +H G K  +             +E  +   + +T+         K   A  
Sbjct: 921  ANLTTH-KRIHTGEKPYK------------CEECGRAFSQSSTL------TAHKIIHAGE 961

Query: 673  KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            KP+KC++C + F     L  HK++H  + ++ C  CGK F
Sbjct: 962  KPYKCEECGKAFSQSSTLTTHKIIHTGEKFYKCEECGKAF 1001

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|A8MXY4|ZNF99_HUMAN Zinc finger protein 99 OS=Homo sapiens GN=ZNF99 PE=2 SV=2

 Score =  262 bits (669), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 197/645 (30%), Positives = 296/645 (45%), Gaps = 81/645 (12%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC++C + F     L +HK +HT E    C  CG+ F     L  H I H+ +KP+ 
Sbjct: 192 KPYKCEECGKAFKQSSHLTRHKAIHTGEKPYKCEECGKAFNHFSALRKHQIIHTGKKPYK 251

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C  C K F +   + KH+ I+H  +K      YK   C KAF++L+AL  H+ +HTGQK 
Sbjct: 252 CEECGKAFSQSSTLRKHE-IIHTEEK-----PYKYEECGKAFSNLSALRKHEIIHTGQKP 305

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
           + C  C   F     L  H KV+H                K C  +E  K  +  + +RK
Sbjct: 306 YKCEECGKAFKWSSKLTVH-KVIHTA-------------EKPCKCEECGKAFKRFSALRK 351

Query: 275 ----------VKPHEDSKEYMALN------------KPFKCDDCFQCFLSKILLNQHKKQ 312
                      K  E SK +   +            KP+KC++C + F     L  HK  
Sbjct: 352 HKIIHTGKQPYKCEECSKAFSNFSALRKHEIIHTGEKPYKCEECGKAFKWSSKLTVHK-V 410

Query: 313 MHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQT 372
           +H  +    C  CG  F     LR H I H+ +KP+ C  CGK F   + ++ H+ +H  
Sbjct: 411 IHMEEKPCKCEECGKAFKHFSALRKHKIIHTGKKPYKCEECGKAFNNSSTLMKHKIIHTG 470

Query: 373 KKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHG 432
           KK    YKC  C + F   + L  H+ +HTG+K   C  C   F     LR H +I+H G
Sbjct: 471 KK---PYKCEECGKAFKQSSHLTRHKAIHTGEKPYKCEECGKAFNHFSALRKH-QIIHTG 526

Query: 433 LKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFL 492
            K  +             +E  K   + +T+RK   HE         KP+KC++C + F 
Sbjct: 527 KKPYK------------CEECGKAFSQSSTLRK---HEI---IHTGEKPYKCEECGKAFK 568

Query: 493 TKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQD 552
               L +HK++H ++  + C  CGK F H   LR+H +IH+  +P+ C  C K F +   
Sbjct: 569 WSSHLTRHKVIHTEEKPYKCEECGKAFNHFSALRKHKIIHTGKKPYKCEECGKAFSQSST 628

Query: 553 VAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATI 612
           +  H+ ++H G+     K YKC  C KAF +   L  H+ +HT +K   C  C  ++   
Sbjct: 629 LRKHE-IIHTGE-----KPYKCEECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKAFKHF 682

Query: 613 GGLRSHIKIVHHG---LKTQQSCQSSHESKTCSVDEINKENEEGATIRK--VKPHEDSKE 667
             LR H KI+H G    K ++  ++ + S T    EI    E+     +  ++ HE    
Sbjct: 683 SALRKH-KIIHTGKKPYKCEECGKAFNNSSTLRKHEIIHTGEKSYKCEECALRKHEI--- 738

Query: 668 YMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
                KP+KC++C + F     L KHK+++  K  + C  CGK F
Sbjct: 739 IHTGKKPYKCEECGKAFNNSSTLRKHKIIYTGKKPYKCEECGKAF 783

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O43345|ZN208_HUMAN Zinc finger protein 208 OS=Homo sapiens GN=ZNF208 PE=2 SV=1

 Score =  258 bits (659), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 199/665 (29%), Positives = 305/665 (45%), Gaps = 55/665 (8%)

Query: 81  KVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFR 139
           KV+T    K   A  KP+KC +C + F    +L KHK++HT E    C  CG+ ++    
Sbjct: 324 KVSTLITHKAIHAGEKPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPST 383

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
           L  H   H+ EKP+ C  C K F     ++KH+ ++H G+K      YKC  C KAF   
Sbjct: 384 LSYHKKIHTGEKPYKCEECGKGFSMFSILTKHE-VIHTGEK-----PYKCEECGKAFNWS 437

Query: 200 AALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV--LHEGYKRPQESCQSSHESKTC 257
           + L +H+ +HTG+  + C  C   F+    L  H K+  + + YK   E C  +      
Sbjct: 438 SNLMEHKKIHTGETPYKCEECGKGFSWSSTLSYHKKIHTVEKPYK--CEECGKAFNQSAI 495

Query: 258 SV--------DEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQH 309
            +        ++  K  E G T  KV      K   A  KP+KC +C + F+    L  H
Sbjct: 496 LIKHKRIHTGEKPYKCEECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKTFIKVSTLTTH 555

Query: 310 KKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRL 369
           K  +H  +  + C  CG  FS+   L  H + H+ +KP+ C  CGK F   + ++ H+R+
Sbjct: 556 K-AIHAGEKPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAFNWSSNLMEHKRI 614

Query: 370 HQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIV 429
           H  +K    YKC  C + F+  + L  H+ +HTG+K   C  C   +     L  H KI 
Sbjct: 615 HTGEK---PYKCEECGKSFSTFSVLTKHKVIHTGEKPYKCEECGKAYKWSSTLSYHKKI- 670

Query: 430 HHGLKTQQSCQSSHES----------KTCSVDEINKENEE-GATIRKVKPHEDSKEYMAL 478
            H ++    C+   ++          K    DE   + EE G T  KV      K   A 
Sbjct: 671 -HTVEKPYKCEECGKAFNRSAILIKHKRIHTDEKPYKCEECGKTFSKVSTLTTHKAIHAG 729

Query: 479 NKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPF 538
            KP+KC +C + F    +L KHK++H  +  + C  CGK +     L  H  IH+  +P+
Sbjct: 730 EKPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPSTLSYHKKIHTGEKPY 789

Query: 539 SCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
            C  C K F     +  H+ V+H G+     K YKC  C KAF++L     H+  H G+K
Sbjct: 790 KCEECGKGFSMFSILTKHE-VIHTGE-----KPYKCEECGKAFSWLSVFSKHKKTHAGEK 843

Query: 599 THLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEI-NKENEEGATIR 657
            + C  C  +Y T   L  H K++H G K  + C+   ++   S + + +K+   G T  
Sbjct: 844 FYKCEACGKAYNTFSILTKH-KVIHTGEKPYK-CEECGKAFNWSSNLMEHKKIHTGETPY 901

Query: 658 KVKPHEDS----------KEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY 707
           K +  + +          K   A  KP+KC++C + F     L +HK  H  ++ + C  
Sbjct: 902 KCEECDKAFSWPSSLTEHKATHAGEKPYKCEECGKAFSWPSRLTEHKATHAGEEPYKCEE 961

Query: 708 CGKTF 712
           CGK F
Sbjct: 962 CGKAF 966

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  254 bits (650), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/628 (28%), Positives = 289/628 (46%), Gaps = 95/628 (15%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGH-LTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC++C + F    LL  H+++HT G    C +CG+ FRQ   L+NH  SH+ EKP+ 
Sbjct: 244 KPYKCNECGKAFHRGSLLTIHQIVHTRGKPYQCGVCGKIFRQNSDLVNHRRSHTGEKPYK 303

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C  C K F + + ++ H RI H G+     K YKC+ C K F   + L  HQ +HTG+K 
Sbjct: 304 CNECGKSFSQSYNLAIHQRI-HTGE-----KPYKCNECGKTFKQGSCLTTHQIIHTGEKP 357

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
           + C++C   F     L+ H ++ H G K         ++   C           G +  +
Sbjct: 358 YQCDICGKVFRQNSNLVNHQRI-HTGEK--------PYKCNIC-----------GKSFSQ 397

Query: 275 VKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKY 334
                  +   + NKP+KCD+C + F     L  H+  +H  +  +TC+ C  +FS++  
Sbjct: 398 SSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTHQI-IHTGEKPYTCDVCDKVFSQRSQ 456

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
           L  H  SH+ +KP+ C+ CGK F + + ++ H+R+H  +   K YKC  C + F   + L
Sbjct: 457 LARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRIHTGE---KPYKCDKCGKAFKQGSLL 513

Query: 395 EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEIN 454
             H+ +HT +K   C  C  +F+    L  H++I H G                      
Sbjct: 514 TRHKIIHTREKRYQCGECGKVFSENSCLVRHLRI-HTG---------------------- 550

Query: 455 KENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY 514
                                    +P+KC+ C + F     L+ HK +H  +  F CN 
Sbjct: 551 ------------------------EQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNE 586

Query: 515 CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKC 574
           CG  F +   L RH+ IH+  +P+ C VC K F    +++ H R +H G+     K ++C
Sbjct: 587 CGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKR-IHTGE-----KPFQC 640

Query: 575 SLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ----- 629
           + C K F+Y   L  H+ +HTG+K + C  C  +Y     L  H+ I+H G K       
Sbjct: 641 NECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHL-IIHTGEKPYNCNEF 699

Query: 630 -----QSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRF 684
                QS + +   +  + ++ +K +  G T   +      +       P+KC +C Q F
Sbjct: 700 GGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVF 759

Query: 685 LTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            +   L +H+ +H  +  + CN CGK F
Sbjct: 760 NSTSNLARHRRIHTGEKPYKCNECGKVF 787

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8N4W9|ZN808_HUMAN Zinc finger protein 808 OS=Homo sapiens GN=ZNF808 PE=2 SV=2

 Score =  254 bits (648), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 294/630 (46%), Gaps = 71/630 (11%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC++C + F     L  HK +HT E    CN CG+ F Q+  L  H   H+  KP+ 
Sbjct: 313 KPYKCNECGKVFRQNSALVIHKAIHTGEKPYKCNECGKAFNQQSHLSRHQRLHTGVKPYK 372

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C IC+K F     ++ H RI H G+K     +YKC+ C KAF H ++L  H  +HTG+K 
Sbjct: 373 CKICEKAFACHSYLANHTRI-HSGEK-----TYKCNECGKAFNHQSSLARHHILHTGEKP 426

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSV-----------DEIN 263
           + C  C   F+ K  L  H K +H G K P + C+    + TC+            ++  
Sbjct: 427 YKCEECDKVFSQKSTLERH-KRIHTGEK-PYK-CKVCDTAFTCNSQLARHRRIHTGEKTY 483

Query: 264 KENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCN 323
           K NE   T  +       +   +  KP+KC+ C   F  +  L  H++ +H  +  + C 
Sbjct: 484 KCNECRKTFSRRSSLLCHRRLHSGEKPYKCNQCGNTFRHRASLVYHRR-LHTLEKSYKCT 542

Query: 324 SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL 383
            C  +F     L  H   H+ +KP+ C+ CGK F +++ +  H+RLH  +K    YKC  
Sbjct: 543 VCNKVFMRNSVLAVHTRIHTAKKPYKCNECGKAFNQQSHLSRHRRLHTGEK---PYKCEA 599

Query: 384 CPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSH 443
           C +VF   +ALE H+ +HTG+K   C +C   F     L  H +I H G KT        
Sbjct: 600 CDKVFGQKSALESHKRIHTGEKPYRCQVCDTAFTWNSQLARHTRI-HTGEKTY------- 651

Query: 444 ESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLL 503
                      K NE G T          +      K +KC  CD+ F+ +  + KH  +
Sbjct: 652 -----------KCNECGKTFSYKSSLVWHRRLHGGEKSYKCKVCDKAFVCRSYVAKHTRI 700

Query: 504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQG 563
           H     + CN C KTF ++  L  H  IHS  +P+ C  C K F +K  +  H R+ H G
Sbjct: 701 HSGMKPYKCNECSKTFSNRSSLVCHRRIHSGEKPYKCSECSKTFSQKATLLCHRRL-HSG 759

Query: 564 KKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH 623
           +K      YKC+ C   F +  +L  H+ +HTG+K++ CT+C  ++     L  HI+I  
Sbjct: 760 EK-----PYKCNDCGNTFRHWSSLVYHRRLHTGEKSYKCTVCDKAFVRNSYLARHIRI-- 812

Query: 624 HGLKTQQSCQSSHESKTCSVDEINKE-NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQ 682
           H  +    C           +E  K  NE+    R  + H   K       P+KC+ CD+
Sbjct: 813 HTAEKPYKC-----------NECGKAFNEQSHLSRHHRIHTGEK-------PYKCEACDK 854

Query: 683 RFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            F  K  L +H+++H  +  + CN CGK F
Sbjct: 855 VFSRKSHLKRHRIIHTGEKPYKCNECGKAF 884

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3

 Score =  253 bits (647), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 198/652 (30%), Positives = 292/652 (44%), Gaps = 87/652 (13%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           K +KC +C + F     L  HK +HT E    CN CG+TF Q   L+ H   H+ EKP+ 
Sbjct: 297 KHYKCSECGKTFSRNSALVIHKAIHTGEKSYKCNECGKTFSQTSYLVYHRRLHTGEKPYK 356

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C  C K F  K  + +H R +H G+K      YKC+ C + F+  ++L  H+ +HTG+K 
Sbjct: 357 CEECDKAFSFKSNLERH-RKIHTGEK-----PYKCNECSRTFSRKSSLTRHRRLHTGEKP 410

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQ-ESCQSSHESKTC--------SVDEINKE 265
           + CN C   F+   +L+ H + LH G K  + E C  +   K+         + ++  K 
Sbjct: 411 YKCNDCGKTFSQMSSLVYH-RRLHTGEKPYKCEECDEAFSFKSNLERHRRIHTGEKPYKC 469

Query: 266 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSC 325
           N+ G T  +       +      KP+KC++C + F  K  L +H+  +H  +  + CN C
Sbjct: 470 NDCGKTFSQTSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHR-IIHTGEKLYKCNEC 528

Query: 326 GLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK-------- 377
           G  FS K  L  H   H+ +KP+ C+ CGK F+ ++ +I HQ +H   K+YK        
Sbjct: 529 GKTFSRKSSLTRHCRLHTGEKPYQCNECGKAFRGQSALIYHQAIHGIGKLYKCNDCHQVF 588

Query: 378 -----------------SYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIG 420
                            SYKC+ C + F H + L  H   H+G+K   C  C   F+   
Sbjct: 589 SNATTIANHWRIHNEERSYKCNRCGKFFRHRSYLAVHWRTHSGEKPYKCEECDEAFSFKS 648

Query: 421 GLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNK 480
            L+ H +I H G K  +                   NE G T  +       +      K
Sbjct: 649 NLQRHRRI-HTGEKPYRC------------------NECGKTFSRKSYLTCHRRLHTGEK 689

Query: 481 PFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC 540
           P+KC++C + F     L  HK +H  +  + CN CGK F  K  L  H+ +H+  +P+ C
Sbjct: 690 PYKCNECGKTFGRNSALIIHKAIHTGEKPYKCNECGKAFSQKSSLTCHLRLHTGEKPYKC 749

Query: 541 PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTH 600
             C K F RK  +  H R+ H G+K      YKC +C KAF     L  H  +HTG+K +
Sbjct: 750 EECDKVFSRKSSLEKHRRI-HTGEK-----PYKCKVCDKAFGRDSHLAQHTRIHTGEKPY 803

Query: 601 LCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVK 660
            C  C  ++     L  H K +H G K  +                   NE G T R   
Sbjct: 804 KCNECGKNFRHNSALVIH-KAIHSGEKPYKC------------------NECGKTFRHNS 844

Query: 661 PHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
             E  K      KP+KC +C + F  K  L++H  LH  +  + CN CGK F
Sbjct: 845 ALEIHKAIHTGEKPYKCSECGKVFNRKANLSRHHRLHTGEKPYKCNKCGKVF 896

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  253 bits (646), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 186/630 (29%), Positives = 284/630 (45%), Gaps = 65/630 (10%)

Query: 93  ALNKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEK 151
           A  K +KC++C + FL    L +HK +HT E    C  CG+ F     L  H   H+ EK
Sbjct: 261 AKEKIYKCEECGKAFLWSSTLTRHKRIHTGEKPYKCEECGKAFSHSSTLAKHKRIHTGEK 320

Query: 152 PFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTG 211
           P+ C  C K F R   ++KH RI H G+     K YKC  C KAF++ + L +H+  HT 
Sbjct: 321 PYKCEECGKAFSRSSTLAKHKRI-HTGE-----KPYKCKECGKAFSNSSTLANHKITHTE 374

Query: 212 QKSHMCNLCSARFTCKGALLGHIKVLHEGYK--RPQESCQSSHESKTCSVDEINKENEE- 268
           +K + C  C   F     L  H K++H G K  + +E  ++ + S   ++ +     E+ 
Sbjct: 375 EKPYKCKECDKAFKRLSTLTKH-KIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKP 433

Query: 269 ------GATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTC 322
                 G            K +    KPFKC +C + F+    L +HK+ +H  +  + C
Sbjct: 434 YKCEECGKAFNWSSSLTKHKRFHTREKPFKCKECGKAFIWSSTLTRHKR-IHTGEKPYKC 492

Query: 323 NSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
             CG  F +   L  H I H+ +KP+    CGK F++   +  H+ +H  +   K YKC 
Sbjct: 493 EECGKAFRQSSTLTKHKIIHTGEKPYKFEECGKAFRQSLTLNKHKIIHSRE---KPYKCK 549

Query: 383 LCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSS 442
            C + F   + L  H+ +H G+K   C  C   F     L +H KI+H G K+ +     
Sbjct: 550 ECGKAFKQFSTLTTHKIIHAGKKLYKCEECGKAFNHSSSLSTH-KIIHTGEKSYK----- 603

Query: 443 HESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKL 502
                   +E  K     +T+R+       K      KP+KC++C + F     L KHK 
Sbjct: 604 -------CEECGKAFLWSSTLRR------HKRIHTGEKPYKCEECGKAFSHSSALAKHKR 650

Query: 503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQ 562
           +H  +  + C  CGK F +   L  H + H+  +P+ C  C K FKR   +  H +++H 
Sbjct: 651 IHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKTFKRLSTLTKH-KIIHA 709

Query: 563 GKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIV 622
           G+KL     YKC  C KAF     L  H+F+HTG+K + C  C  ++     L  H +I 
Sbjct: 710 GEKL-----YKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRI- 763

Query: 623 HHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQ 682
            H  +    C+           E  K     +T+ +       K      KP+KC++C +
Sbjct: 764 -HTREKPFKCK-----------ECGKAFIWSSTLTR------HKRIHTGEKPYKCEECGK 805

Query: 683 RFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            F     L KHK +H  +  + C  CGK F
Sbjct: 806 AFSRSSTLTKHKTIHTGEKPYKCKECGKAF 835

Homo sapiens (taxid: 9606)

>sp|Q08AN1|ZN616_HUMAN Zinc finger protein 616 OS=Homo sapiens GN=ZNF616 PE=2 SV=2

 Score =  250 bits (639), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/623 (29%), Positives = 287/623 (46%), Gaps = 87/623 (13%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEG-HLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC++C + F    LL  HK++HT G    C++CG+ FR+    + H  SH+ +KP+ 
Sbjct: 211 KPYKCNECGKAFHRASLLTVHKVVHTRGKSYQCDVCGKIFRKNSYFVRHQRSHTGQKPYI 270

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C  C K F +   ++ H RI H G+K      YKC+LC K+F+    L  HQ VHTG++ 
Sbjct: 271 CNECGKSFSKSSHLAVHQRI-HTGEK-----PYKCNLCGKSFSQRVHLRLHQTVHTGERP 324

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQ--ESCQSS--HES------KTCSVDEINK 264
             CN C   F     L  H +V+H G K+P   + C  +  H S      +  S ++  K
Sbjct: 325 FKCNECGKTFKRSSNLTVH-QVIHAG-KKPYKCDVCGKAFRHRSNLVCHRRIHSGEKQYK 382

Query: 265 ENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNS 324
            NE G    K       +    + KP KC++C + F  +  L  H++ +H  +  + CN 
Sbjct: 383 CNECGKVFSKRSSLAVHRRIHTVEKPCKCNECGKVFSKRSSLAVHQR-IHTGQKTYKCNK 441

Query: 325 CGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLC 384
           CG ++S+  +L  H   H+ +K + C+ CGK F   + +  HQR+H  +K    YKC+ C
Sbjct: 442 CGKVYSKHSHLAVHWRIHTGEKAYKCNECGKVFSIHSRLAAHQRIHTGEK---PYKCNEC 498

Query: 385 PRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHE 444
            +VF+  + L  H+ +HTG+K   C  C  +F+       H +I H G K  +  +    
Sbjct: 499 GKVFSQHSRLAVHRRIHTGEKPYKCKECGKVFSDRSAFARHRRI-HTGEKPYKCKECGKV 557

Query: 445 SKTCSVDEINKE----------NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTK 494
              CS   +++           NE G    +       +      KP+KC +C + F   
Sbjct: 558 FSQCSRLTVHRRIHSGEKPYKCNECGKVYSQYSHLVGHRRVHTGEKPYKCHECGKAFNQG 617

Query: 495 ILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVA 554
             LN+H+ +H  +  + CN CG +F  +  LR H  +H+  RP+ C  C K FKR  ++ 
Sbjct: 618 STLNRHQRIHTGEKPYKCNQCGNSFSQRVHLRLHQTVHTGDRPYKCNECGKTFKRSSNLT 677

Query: 555 GHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGG 614
            H +++H GK     K YKC  C K F +   L  HQ +HTG+K + C  C  ++  +  
Sbjct: 678 AH-QIIHAGK-----KPYKCDECGKVFRHSSHLVSHQRIHTGEKRYKCIECGKAFGRLFS 731

Query: 615 LRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKP 674
           L  H +I              H  K                                 KP
Sbjct: 732 LSKHQRI--------------HSGK---------------------------------KP 744

Query: 675 FKCDDCDQRFLTKILLNKHKLLH 697
           +KC++C + F+ +  L KH++ H
Sbjct: 745 YKCNECGKSFICRSGLTKHRIRH 767

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  250 bits (639), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 187/628 (29%), Positives = 296/628 (47%), Gaps = 84/628 (13%)

Query: 90  ENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHST 149
           +NV   +P  CD+  Q F+    L +H+  H E    C+ CG+ F     L+ H   H+ 
Sbjct: 72  QNVFKRRPHNCDEYGQSFVWNTGLFRHRKTHCEKPYECDKCGKAFSVSSALVLHQRIHTG 131

Query: 150 EKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVH 209
           EKP+SC  C K F R  ++ KH R VH G+     K YKC  C KAF+  + L  HQ +H
Sbjct: 132 EKPYSCNWCIKSFSRSSDLIKHQR-VHTGE-----KPYKCDECGKAFSQSSDLIIHQRIH 185

Query: 210 TGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEG 269
           TG+K + C+ CS  F+ +  L+ H ++ H G K             TC  ++ NK   + 
Sbjct: 186 TGEKPYQCSHCSKSFSQRSDLVKHQRI-HTGEK-----------PYTC--NQCNKHFSQS 231

Query: 270 ATIRKVKPHEDSKEYMALNKPFKCDDCFQCF--LSKILLNQHKKQMHFNKGGFTCNSCGL 327
           + + K       +      KP+KCD C + F   S ++L+Q   ++H  +  + CN C  
Sbjct: 232 SDVIK------HQRIHTGEKPYKCDVCAKAFSQSSDLILHQ---RIHTGEKPYPCNQCSK 282

Query: 328 IFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRV 387
            FS+   L  H   H+ +KP+ C+ CGK F + + +I HQR+H  +   K Y C  C + 
Sbjct: 283 SFSQNSDLIKHRRIHTGEKPYKCNECGKAFNQSSVLILHQRIHTGE---KPYPCDQCSKT 339

Query: 388 FTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKT 447
           F+ L+ L +HQ +HTG+K   C  C  +F+    L  H +I H G K  +          
Sbjct: 340 FSRLSDLINHQRIHTGEKPYPCNQCNKMFSRRSDLVKHHRI-HTGEKPYE---------- 388

Query: 448 CSVDEINKENEEGATI---RKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLH 504
              DE  K   + + +   +++   E         KP+ C DC + F  +  L KH+ +H
Sbjct: 389 --CDECGKTFSQSSNLILHQRIHTGE---------KPYPCSDCTKSFSRRSDLVKHQRIH 437

Query: 505 FDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGK 564
             +  ++CN C K+F     L +H  +HS  +P+ C  C+K F +  D+  H R +H G+
Sbjct: 438 TGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQR-IHTGE 496

Query: 565 KLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHH 624
                K Y C+ C K+F+    L  HQ +HTG+K + C+ C  +++    L  H +I H 
Sbjct: 497 -----KPYLCTQCSKSFSQNSDLIKHQRIHTGEKPYKCSECRKAFSQCSALTLHQRI-HT 550

Query: 625 GLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRF 684
           G K                   N  NE G +  +     + ++     KP+KCD C + F
Sbjct: 551 GEKP------------------NPCNECGKSFSRHSDLINHQKIHTGEKPYKCDACGKAF 592

Query: 685 LTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            T   L +H+ +H  +  + C  C ++F
Sbjct: 593 STCTDLIEHQKIHAGEKPYRCVQCSRSF 620

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score =  248 bits (634), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 172/549 (31%), Positives = 266/549 (48%), Gaps = 58/549 (10%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KP++C +C++ F  K  L+ H+ +HT E    CN CG++F     L  H   H+ EKP+ 
Sbjct: 544  KPYECVECEKTFSHKTHLSVHQRVHTGEKPYECNDCGKSFTYNSALRAHQRIHTGEKPYE 603

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C+K F     +  H RI H G+K      Y+C+ C ++F H++ L+ HQ +HTG+K 
Sbjct: 604  CSDCEKTFAHNSALRAHHRI-HTGEK-----PYECNECGRSFAHISVLKAHQRIHTGEKP 657

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
            + CN C   FT   AL  H ++ H G ++P E           S  +I++    G     
Sbjct: 658  YECNECGRSFTYNSALRAHQRI-HTG-RKPYECSDCEKTFAHNSALKIHQRIHTGE---- 711

Query: 275  VKPHE--DSKEYMALN-------------KPFKCDDCFQCFLSKILLNQHKKQMHFNKGG 319
             KP+E  + ++  A N             K ++C +C + F  K  L+ H++ +H  +  
Sbjct: 712  -KPYECNECEKTFAHNSALRAHQNIHTGEKLYECSECGKTFFQKTRLSTHRR-IHTGEKP 769

Query: 320  FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
            + C+ CG  FS+K YL  H   H+ +KP+ C++CGK F  +  +I HQR+H  +K    Y
Sbjct: 770  YECSKCGKTFSQKSYLSGHERIHTGEKPYECNVCGKTFVYKAALIVHQRIHTGEK---PY 826

Query: 380  KCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSC 439
            +C+ C + F+    L  HQ +HTG+K   C  C   FA    LR+H +I H G K  +  
Sbjct: 827  ECNQCGKTFSQRTHLCAHQRIHTGEKPYECNECGKTFADNSALRAHHRI-HTGEKPYEC- 884

Query: 440  QSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNK 499
                             N+ G T  K           +  KP++C +C + F  K  ++ 
Sbjct: 885  -----------------NDCGKTFSKTSHLRAHLRTRSGEKPYECSECGKTFSEKSYVSA 927

Query: 500  HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV 559
            H+ +H  +  + CN CGK F H   LR H  IH+  + + C  C K F +K  ++ H R 
Sbjct: 928  HQRVHTGEKPYECNVCGKPFAHNSTLRVHQRIHTGEKSYECNDCGKTFSQKSHLSAHQR- 986

Query: 560  VHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHI 619
            +H G+     K Y+C+ C KAF     L  HQ +HTG+K + C  C  ++     LR H 
Sbjct: 987  IHTGE-----KPYECNECGKAFAQNSTLRVHQRIHTGEKPYECDECGKTFVRKAALRVHH 1041

Query: 620  KIVHHGLKT 628
              +H   KT
Sbjct: 1042 TRMHTREKT 1050

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	712
358416962	1156	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.783	0.482	0.313	4e-72
440911185	1148	Zinc finger protein 91, partial [Bos gru	0.785	0.486	0.312	2e-71
348559643	1451	PREDICTED: zinc finger protein 729-like	0.824	0.404	0.310	2e-71
334332901	1041	PREDICTED: zinc finger protein 208-like	0.813	0.556	0.312	5e-71
301624183	4418	PREDICTED: LOW QUALITY PROTEIN: hypothet	0.785	0.126	0.317	5e-71
395750852	1120	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.796	0.506	0.309	8e-71
395529713	1555	PREDICTED: zinc finger protein 850-like	0.814	0.372	0.315	9e-71
187671941	1173	RecName: Full=Zinc finger protein 729	0.771	0.468	0.307	4e-70
358417000	1471	PREDICTED: zinc finger protein 836-like	0.807	0.390	0.323	8e-70
440891309	955	Zinc finger protein 845, partial [Bos gr	0.789	0.588	0.317	2e-69

>gi|358416962|ref|XP_003583526.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 729 [Bos taurus]

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 207/660 (31%), Positives = 299/660 (45%), Gaps = 102/660 (15%)

Query: 95  NKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
            KP+KCD+C + F  K +L  H+++HT E    C+ CG+ FR K  LL+H   H+ EKP+
Sbjct: 211 EKPYKCDECGKAFRVKSILLSHQIVHTGEKPYKCDECGKAFRVKLSLLSHQTVHTGEKPY 270

Query: 154 SCPICKKQFKRKHEVSKHDRIVHQGKK-----------------------YNVYKSYKCS 190
            C  C K F  K  + +H + +H G+K                       +   K YKC 
Sbjct: 271 KCDDCGKAFHAKSSLLRH-QTIHTGQKPYKCDEYAKVFRAKSKLLSHQTIHTGQKPYKCD 329

Query: 191 LCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQ-ESCQ 249
            C KAF   +AL  HQ +HTG+K + C+ C   F  K  LL H + +H G K  + + C 
Sbjct: 330 DCCKAFHAKSALLTHQTIHTGEKPYRCDDCGKAFRVKSMLLSH-QTIHTGQKPYKCDECG 388

Query: 250 SSHESK-------TCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLS 302
            +   K       T  + E   + E G + R+       +      KP+KCDDC + F +
Sbjct: 389 KAFRLKSSLLRHQTIHIREKPYKYECGKSFREKSKLLTHQTIHTGQKPYKCDDCGKAFHA 448

Query: 303 KILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENG 362
           K  L  H + +H  +  + C+ CG  F  K  L  H   H+ +KP+ C  CGK F+ ++ 
Sbjct: 449 KSALLTH-QTIHTGQKPYKCDECGKAFRVKSILLGHQTVHTGEKPYKCDECGKAFRVKSI 507

Query: 363 VINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGL 422
           +++HQ +H  +   K YKC  C + FTH + L  HQ +HTGQK   C +C  +F+    L
Sbjct: 508 LLSHQTVHTGE---KPYKCDECGKTFTHSSNLRRHQKIHTGQKLFKCDICDKVFSRSEQL 564

Query: 423 RSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPF 482
             H   VH G                                               KP+
Sbjct: 565 AGHQS-VHSG----------------------------------------------EKPY 577

Query: 483 KCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV 542
           KCD+C + F  K +L +H+ +H  +  + C+ CGK F H   LRRH  IH+  + F C +
Sbjct: 578 KCDECGKAFRVKSILLRHQTVHTGEKPYKCDECGKAFTHSSNLRRHQKIHTGQKLFKCDI 637

Query: 543 CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           C K F R + +AGH + VH G      K YKC  C KAF     L  HQ VHTG+K + C
Sbjct: 638 CDKVFSRSEHLAGH-QSVHSGA-----KPYKCDECDKAFRVKSILLIHQTVHTGEKPYKC 691

Query: 603 TMCPASYATIGGLRSHIKIVHHGLKT----------QQSCQSSHESKTCSVDEINKENEE 652
             C  ++     LR H KI H G K            +S Q +      S  +  K NE 
Sbjct: 692 EECGKAFTHSSNLRRHQKI-HTGQKLFKCDICDKVFNRSEQLAGHQSVHSGAKPYKCNEC 750

Query: 653 GATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
           G    +       K      KP+KCD+C + F  K +L +H+ +H  +  + C+ CGK F
Sbjct: 751 GKHFGQPSQFISHKRLHTAEKPYKCDECGKAFRVKSILLRHQTVHTGEKPYKCDECGKAF 810

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440911185|gb|ELR60892.1| Zinc finger protein 91, partial [Bos grunniens mutus]

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 197/631 (31%), Positives = 295/631 (46%), Gaps = 72/631 (11%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC DC + F  +    +H+L+HT E    C  CG+ F Q   L  H   H+ EKP+ 
Sbjct: 422 KPYKCKDCGKAFSQRYGFTQHQLIHTGEKAYKCTECGKEFSQYSTLTKHQRIHTGEKPYK 481

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALE--DHQYVHTGQ 212
           C  C K F R    +KH +I+H G+K      YKC  C KAF H   L   +H+ +H+GQ
Sbjct: 482 CKECGKTFNRNSNFTKH-QIIHTGEK-----PYKCKDCGKAFRHRRTLHMGNHKRIHSGQ 535

Query: 213 KSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATI 272
           K + CN+C   F     L  H +V H G K         ++   C           G   
Sbjct: 536 KPYKCNVCGKAFNQGSNLTTHQRV-HTGEK--------PYKCDVC-----------GKVF 575

Query: 273 RKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEK 332
            +    E+ +      KP+KC +C + F+   LL  H+K MH  +  + CN CG  F+E+
Sbjct: 576 SRNSHLENHQRMHTGEKPYKCSECGKAFIQHSLLWSHEK-MHSGEKPYKCNECGKAFAER 634

Query: 333 KYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLA 392
             L  H   H+ +KP+ C++CGK F   + +  H+ +H  +K    Y+CS C R FT  +
Sbjct: 635 SSLNKHKNIHTGEKPYKCTVCGKAFTMRSNLTQHETIHTGEK---PYRCSECGRAFTQFS 691

Query: 393 ALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLK-----------TQQSCQS 441
            L  HQ +HTG+K   C +C   F  +  L  H +I H G K           TQ+S   
Sbjct: 692 RLTRHQKMHTGEKPHKCNVCGKAFIELSQLWGHERI-HTGEKPHKCNVCGKRFTQRSSLM 750

Query: 442 SHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHK 501
           +H+           ++ + A I++ +     + +    KP+KC++C + F  +  L +HK
Sbjct: 751 AHQRIHTGEKSYKCKDCDKAFIQRSQLWGHERTHTG-EKPYKCNECGKAFTMRSYLTQHK 809

Query: 502 LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVH 561
            +H  +  + C+ CGK + H   L RH +IH+  +P++C VC K F R   +A H R+ H
Sbjct: 810 TIHTGEKPYKCHECGKAYTHS-NLSRHQLIHTGEKPYNCDVCGKVFSRNSHLACHQRI-H 867

Query: 562 QGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI 621
            G+K      YKC  C K F     L  HQ  HT +K + C +C   ++    L SH + 
Sbjct: 868 TGEK-----PYKCKECGKTFNQCSNLTRHQLTHTRKKAYECDVCGKVFSRKSVLVSH-QT 921

Query: 622 VHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCD 681
           VH G K+                   K NE G   RK       K      KP++C++C 
Sbjct: 922 VHFGEKSY------------------KCNECGKAFRKRSSLTQHKRIHTGEKPYRCNECG 963

Query: 682 QRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
           + F     L +HK++H  +  + CN CGK F
Sbjct: 964 KAFRKHSNLTQHKVVHTGEKPYRCNECGKAF 994

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348559643|ref|XP_003465625.1| PREDICTED: zinc finger protein 729-like [Cavia porcellus]

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 205/661 (31%), Positives = 311/661 (47%), Gaps = 74/661 (11%)

Query: 83   NTHGASKENV-ALNKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRL 140
            N+H AS   V +  KP+KCD+C + F     L +H  +HT E    CN CG+ F  +  L
Sbjct: 533  NSHLASHRGVHSGEKPYKCDECGKVFSQTSNLARHWRVHTGEKPYKCNECGKAFSVRSSL 592

Query: 141  LNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLA 200
             +H + H+ EKP+ C  C K F +   ++ H RI H G+     K YKC+ C KAF   +
Sbjct: 593  TSHQVIHTGEKPYKCNECGKVFSQTSSLAIHQRI-HTGE-----KPYKCNQCGKAFNSHS 646

Query: 201  ALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQE-----------SCQ 249
             L  HQ +HTG+K + C+ C   FT    L  H ++ H G ++P +           S  
Sbjct: 647  NLNTHQVIHTGEKPYKCSECGKVFTQNSHLANHRRI-HTG-EKPYKCNECGKAFSVYSSL 704

Query: 250  SSHES-----KTCSVDEINK---ENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFL 301
            ++H++     K    DE  K   +N   A+ R+    E         KPFKCD C + F 
Sbjct: 705  TTHQAIHTGEKPYKCDECGKVFTQNSHLASHRRTHTGE---------KPFKCDKCGKAFS 755

Query: 302  SKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKREN 361
             +  L  H + +H  +  +TC  CG  F  + YL  H   H+  KP+ C+ CGK F + +
Sbjct: 756  VRSSLTTH-QAIHTGEKPYTCKDCGKAFFRRSYLLVHERRHTGAKPYKCNECGKVFTQNS 814

Query: 362  GVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGG 421
             + +H+R+H  +   K YKC+ C + F+  + L  HQ +HTG+K   C  C  +F+   G
Sbjct: 815  YLTSHRRIHTGE---KPYKCNDCGKAFSVRSNLTKHQVIHTGEKPYKCNECGKVFSHASG 871

Query: 422  LRSHMKIVHHGLKTQQS-------CQSSHESKTCSVDEINKE---NEEGATIRKVKPHED 471
            L  H + +H G K  +         Q+SH +    V    K    NE G           
Sbjct: 872  LAFHRRTIHTGEKPYKCDECGKVFIQNSHLASHRGVHTGEKPYKCNECGKVFSHTSNLAR 931

Query: 472  SKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVI 531
                    KP+KCD+C + F     L  H+  H  +  F C+ CGK F  +  L  H  I
Sbjct: 932  HWRVHTGEKPYKCDECGKVFTQNSHLASHRRTHTGEKPFKCDKCGKAFSVRSSLITHQAI 991

Query: 532  HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
            H+  +P++C  C K F R  ++A H R +H G+K   YKSY+C+ C K F Y  +L  H+
Sbjct: 992  HTGGKPYTCKDCGKVFSRSSNLASHQR-IHAGQK--PYKSYQCNECGKVFGYTSSLAHHR 1048

Query: 592  FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENE 651
             +HTG+K + C  C  ++      R    +VH    T      +   K     ++  +N 
Sbjct: 1049 RIHTGEKLYKCIECGKAF-----FRRSYLLVHERRHT-----GAKPYKCNECGKVFTQNS 1098

Query: 652  EGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKT 711
               + R++   E         KP+KC+DC + F  +  L KH+++H  +  + CN CGK 
Sbjct: 1099 YLTSHRRIHTGE---------KPYKCNDCGKAFSVRSNLTKHQVIHTGEKPYKCNECGKV 1149

Query: 712  F 712
            F
Sbjct: 1150 F 1150

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334332901|ref|XP_001375703.2| PREDICTED: zinc finger protein 208-like [Monodelphis domestica]

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 200/639 (31%), Positives = 301/639 (47%), Gaps = 60/639 (9%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KP+KCD+C + F  +  L +H+L H  E    CN CG+ F Q+  L  H  +H  EKPF 
Sbjct: 409  KPYKCDECGKAFTQRTHLTQHQLTHIGEKPFKCNECGKAFFQRIHLTQHQHTHIEEKPFK 468

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C K +    ++S H RI H G+     KSYKC+ C KAFT  A L  HQ +H+G+K 
Sbjct: 469  CNECGKAYSYISQLSLHQRI-HSGE-----KSYKCNECGKAFTKWANLTRHQRIHSGEKP 522

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRP----------QESCQSSHESKTCSVDEINK 264
            + CN C   F+ +  L  H+ ++H G ++P           +  Q +   +  + ++  K
Sbjct: 523  YKCNECEKAFSQRAHLTQHL-LIHSG-EKPFKCNECERAFSQVSQLNLHQRIHTGEKPYK 580

Query: 265  ENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNS 324
             NE G    +       ++  +  KPFKC++C + F  +  L QH + +H  +  F CN 
Sbjct: 581  CNECGKAFTQRTILTQHQKIHSGEKPFKCNECGKAFTKRSNLTQH-QHIHIGEKPFKCNE 639

Query: 325  CGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLC 384
            CG  +S    L  H   HS +KP+ C+ CGK F +   +  H ++H  +   K YKC+ C
Sbjct: 640  CGKAYSYILQLNIHQRIHSGEKPYKCNECGKAFTKRVILTQHLKIHSGE---KPYKCNEC 696

Query: 385  PRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQS--- 441
             + FT  A L  HQ +H+G+K   C  C   F     L  H +I H G K    C     
Sbjct: 697  CKAFTKQANLTRHQRIHSGEKPYKCNDCGKTFTQKPNLTQHQRI-HTGDKKSYKCNECGK 755

Query: 442  --------SHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLT 493
                    +   +T S ++  K NE G    +           +  KP+KC++C + F  
Sbjct: 756  VFPMWAELTRHLRTHSGEKPYKCNECGKAFTQRASLTQHHRIHSGEKPYKCNECGKAFTK 815

Query: 494  KILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDV 553
            +  L +H+  H  +  F CN CGK +    +L  H+ IHS  R + C  C K F ++  +
Sbjct: 816  RAHLTQHQFTHSGEKPFKCNECGKAYGQFSQLNIHLRIHSGERSYKCNECGKAFTQRASL 875

Query: 554  AGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIG 613
              H R +H G+     K YKC+ C KAFT    L  HQF H G+K   C  C  +Y+ I 
Sbjct: 876  TQHQR-IHSGE-----KPYKCNECGKAFTQRAHLTQHQFTHNGEKHFKCNECGKAYSQIS 929

Query: 614  GLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNK 673
             L  H +I H G             K+   +E  K   + A + +       +   +  K
Sbjct: 930  QLNIHRRI-HSG------------EKSYKCNECEKIFPKWADLNR------HQRIHSGEK 970

Query: 674  PFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            P+KC++C++ F  +  L++H L H  +  F CN CGK F
Sbjct: 971  PYKCNECEKAFTQRAHLSRHLLTHSGEKPFKCNECGKAF 1009

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301624183|ref|XP_002941407.1| PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC100216012, partial [Xenopus (Silurana) tropicalis]

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 210/662 (31%), Positives = 309/662 (46%), Gaps = 103/662 (15%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KPF C +C + F  K  L +H+ +HT E   TC  CG+ F  K++L NH   H+ EKPF+
Sbjct: 1472 KPFTCTECGKHFSEKGSLQRHERMHTGEKPFTCTECGKAFYGKWKLQNHQKIHTGEKPFT 1531

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C  +F  K  + +H RI H G+K      + C  C K F+ + +L  H+ VHTG+K 
Sbjct: 1532 CTECGSRFTYKGNLQRHQRI-HTGEK-----PFSCKECGKQFSEMGSLHKHKKVHTGEKP 1585

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
            + C  C   FT K +L  H +  H G +RP             S  E  K   +  T+R 
Sbjct: 1586 YACAECGKCFTEKSSLRVHERS-HTG-ERPF------------SCGECGKSFFKMGTLR- 1630

Query: 275  VKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKY 334
                   K+     KPF C +C + F+ + +L  H++ +H  +  FTC  CGL F+++  
Sbjct: 1631 -----THKKIHTGEKPFTCTECGKSFVERSILRVHER-IHTGEKPFTCTECGLSFTKRGV 1684

Query: 335  LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
            L+ H   H+ +KPF+C+ CGKRF     ++ H+R+H  +K    + C+ C + F+    L
Sbjct: 1685 LQVHQRIHTGEKPFACTECGKRFSEMATLLTHKRIHTGEK---PFTCTECGKRFSEKGRL 1741

Query: 395  EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHG---------------------- 432
            + HQ +HTG+K   CT C   F+    L  H ++ H G                      
Sbjct: 1742 QRHQRIHTGEKPYSCTECGKRFSERSNLSKHERL-HAGEKPFSCTEXGTICGKCFSRKDN 1800

Query: 433  LKTQQSCQSSHESKTCSVDEINKE-NEEGATIRKVKPHEDSKEYMALN------------ 479
            LKT +   +  +  TC+  E  K  +   + IR ++ H   K Y   +            
Sbjct: 1801 LKTHERIHTGEKPFTCT--ECGKSFSFITSFIRHMRIHTGEKPYSCADCGKQFSQKSYIQ 1858

Query: 480  ---------KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIV 530
                     KPF C +C +RF     L++H+ LH  +  F+C  CGK F  K++LR H  
Sbjct: 1859 IHQKIHTGEKPFTCSECGKRFSLSSYLHRHQRLHTGEGLFTCTECGKAFYGKWQLRNHQN 1918

Query: 531  IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDH 590
            IH+  +PF+C  C K F RK  +  H + +H G+ L     + C+ C K FT  G L  H
Sbjct: 1919 IHTGEKPFTCTECGKTFTRKGTLRMHQK-IHTGENL-----FTCTECGKQFTEKGKLHTH 1972

Query: 591  QFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKEN 650
            Q +HTG+K   CT C  S+A  G LR H +I H G K            TC+  E  +  
Sbjct: 1973 QRIHTGEKPFTCTECGKSFAEKGTLRIHERI-HTGEK----------PFTCT--ECGRSF 2019

Query: 651  EEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGK 710
             E  ++RK       K      KPF C +C + F     L  HK +H     +SC  CGK
Sbjct: 2020 AEKGSLRK------HKRTHTGEKPFTCRECGKCFSRSSSLCNHKQVHAGDKSYSCTECGK 2073

Query: 711  TF 712
            +F
Sbjct: 2074 SF 2075

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395750852|ref|XP_003780371.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 729-like [Pongo abelii]

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 201/650 (30%), Positives = 306/650 (47%), Gaps = 83/650 (12%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC++C + F     L +HK++H+ +    C  CG+ F Q   L NH + HS EKP+ 
Sbjct: 353 KPYKCEECGKAFNHFSDLRRHKIIHSGKKPYKCEECGKAFSQSSTLRNHQVIHSGEKPYK 412

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           C  C K FK   +++ H +++H  +K       KC  C KAF H +AL  H+ +HT +K 
Sbjct: 413 CEECGKAFKWSSKLTLH-KVIHTAEK-----PCKCEECGKAFKHFSALRKHKVIHTREKL 466

Query: 215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQ--ESC-----QSSHES---------KTCS 258
           + C  C   F     L  H K++H G K+P   E C     QSSH +         K C 
Sbjct: 467 YKCEECGKAFNNSSILTKH-KIIHTG-KKPYKCEECGRAFRQSSHLTRHKAIHTGEKPCK 524

Query: 259 VDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKG 318
            +E  K     + +R+ K     K      KP+KC++C + F     L +H+  +H  + 
Sbjct: 525 CEECGKAFSHFSALRRHKIIHTGK------KPYKCEECDKAFSQSSTLRKHE-IIHTGEK 577

Query: 319 GFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
            + C  CG  FS+   LR H I H+ +KP+ C  C K FK  + +  H+ +H  +K    
Sbjct: 578 PYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEECDKAFKWSSKLTVHKVIHTAEK---P 634

Query: 379 YKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQ-- 436
            KC  C + F+H +AL  H  +HTG+K   C  C   F+    LR H +I+H G K    
Sbjct: 635 CKCEECGKAFSHFSALRRHTIIHTGKKPYKCEECDKAFSQSSTLRKH-EIIHTGEKPYKC 693

Query: 437 QSCQSSHE--------------SKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPF 482
           + C  + +               K C  +E  K     + +R+       K      KP+
Sbjct: 694 EECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKAFSHFSALRRHTIIHTGK------KPY 747

Query: 483 KCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV 542
           KC++CD+ F     L KH+++H  +  + C  CGK F     LR+H +IH+  +P+ C  
Sbjct: 748 KCEECDKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEE 807

Query: 543 CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           C K FK    +  H +V+H GK     K YKC  C KAF+    L  H+ +H+G+K + C
Sbjct: 808 CGKAFKWSSKLTVH-KVIHTGK-----KPYKCEECGKAFSQSSTLRKHEIIHSGEKPYKC 861

Query: 603 TMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPH 662
             C  ++  +  L  H K++H G             K C  +E  K  +  + +RK +  
Sbjct: 862 EECGKAFQWLSKLTVH-KVIHTG------------EKPCKCEECGKAFKHFSALRKHRII 908

Query: 663 EDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
              K      KP+KC++C + F     L KHK++H  K  + C  CGK F
Sbjct: 909 HTGK------KPYKCEECGKAFNDSSTLMKHKIIHTGKKPYKCEECGKAF 952

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395529713|ref|XP_003766953.1| PREDICTED: zinc finger protein 850-like [Sarcophilus harrisii]

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 201/637 (31%), Positives = 296/637 (46%), Gaps = 57/637 (8%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KPFKC+ C++ F     L +H+ +HT E    CN CG+ FR    L+ H   H+ EKPF 
Sbjct: 823  KPFKCNQCEKAFSCNSNLARHQRIHTGEKRFKCNQCGKAFRFSSSLVTHQRKHTGEKPFK 882

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C K F +   +  H RI H G+K+     +KC+ C K+F   + L +HQ +HTG+K 
Sbjct: 883  CNQCGKDFAQSAHLGLHQRI-HTGEKH-----FKCNQCGKSFRFSSILAEHQRIHTGEKP 936

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYK-------RPQESCQSSHES--KTCSVDEINKE 265
              CN C   FT    L  H ++ H G K           SC SS     K  + ++  K 
Sbjct: 937  FKCNQCGKDFTQSSNLALHQRI-HTGEKPFKCNQCGKAFSCNSSLTIHLKIHTGEKPFKC 995

Query: 266  NEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSC 325
            N+ G T R+       +      KPFKC+ C + F     L  H++ +H  +  F CN C
Sbjct: 996  NQCGKTFRRSSHLATHQRIHTGEKPFKCNQCGKAFTQSSNLALHQR-IHTGEKPFKCNQC 1054

Query: 326  GLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCP 385
            G  F++   L  H   H  +K   C+ CGK F R   +  HQR+H  +K    YKC+ C 
Sbjct: 1055 GKAFTQSSNLSTHQRIHVGEKXXXCNQCGKSFIRRKSLPKHQRIHTGEK---PYKCNQCG 1111

Query: 386  RVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHES 445
            + FT  A L  HQ +HTG+K   C  C   F     L  H +I H G K  +  Q     
Sbjct: 1112 KAFTQNAGLTLHQRIHTGEKPYKCNQCGKAFTQNASLVVHQRI-HTGEKPYKCNQCGKAF 1170

Query: 446  KTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHF 505
             T SV  +++    G                   KP+KCD C + F   + L +H+ +H 
Sbjct: 1171 ITRSVLVVHQRIHAG------------------EKPYKCDQCGKAFTQSVSLAEHQRIHT 1212

Query: 506  DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
             +  + CN CGK+F+ +  L +H  IH+   P+ C  C K F R   +A H + +H G+ 
Sbjct: 1213 GEKPYKCNQCGKSFIRRKSLPKHQRIHTGETPYKCNQCGKAFIRSDSLAAHQK-IHTGE- 1270

Query: 566  LIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG 625
                K YKC+ C KAF    +L +HQ +HTG+K + C  C  ++    GL  H +I H G
Sbjct: 1271 ----KPYKCNQCGKAFIRSDSLAEHQKIHTGEKPYKCNQCGKAFTQNAGLALHQRI-HTG 1325

Query: 626  LKTQQSCQS----------SHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPF 675
             K  +  Q           S   +  + ++  K N+ G + +        +      KP+
Sbjct: 1326 EKPYKCNQCGKSFIGRNSLSKHQRIHTGEKPYKCNQCGKSFKGKNSLSKHQRIHTGEKPY 1385

Query: 676  KCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            KC+ C + F+    L+KH+ +H  +  + CN CGK F
Sbjct: 1386 KCNQCGKSFIRSDSLSKHQRIHTGEKPYKCNQCGKAF 1422

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|187671941|sp|A6NN14.3|ZN729_HUMAN RecName: Full=Zinc finger protein 729

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 197/640 (30%), Positives = 293/640 (45%), Gaps = 91/640 (14%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KP+KC++C + F +   L KHK++HT E    C  CG+ FRQ   L  H   H+ EKP+ 
Sbjct: 430  KPYKCEECGKAFNSSSTLMKHKIIHTGEKPYKCEECGKAFRQSSHLTRHKAIHTGEKPYK 489

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C K F    ++ +H +I+H GKK      YKC  C KAF+  + L +HQ +HTG+K 
Sbjct: 490  CEECGKAFNHFSDLRRH-KIIHTGKK-----PYKCEECGKAFSQSSTLRNHQIIHTGEKP 543

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
            + C  C   F     L  H KV+H G              K C  +E  K  +  + +RK
Sbjct: 544  YKCEECGKAFKWSSKLTVH-KVIHTG-------------EKPCKCEECGKAFKHFSALRK 589

Query: 275  VKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKY 334
                   K      K +KC++C + F +  +L +HK  +H  K  + C  CG  F +  +
Sbjct: 590  ------HKVIHTREKLYKCEECGKAFNNSSILAKHK-IIHTGKKPYKCEECGKAFRQSSH 642

Query: 335  LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
            L  H   H+ +KP+ C  CGK F   + +  H+ +H  KK    YKC  C + F+H +AL
Sbjct: 643  LTRHKAIHTGEKPYKCEECGKAFSHFSALRRHKIIHTGKK---PYKCEECGKAFSHFSAL 699

Query: 395  EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEIN 454
              H+ +HTG+K   C  C   F     L  H K++H               K C  +E  
Sbjct: 700  RRHKIIHTGEKPYKCEECGKAFKWSSKLTVH-KVIHTA------------EKPCKCEECG 746

Query: 455  KENEEGATIRKVKP-HEDSKEYM------ALN---------------KPFKCDDCDQRFL 492
            K  +  + +RK K  H   K Y       A N               KP+KC++C + F 
Sbjct: 747  KSFKHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKHKVIHTGEKPYKCEECGKAFK 806

Query: 493  TKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQD 552
                L  HK++H  +    C  CGK F H   LR+H +IH+  +P+ C  C K F +   
Sbjct: 807  WSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKAFHQSSK 866

Query: 553  VAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATI 612
            +A H ++ H G+K      YKC  C KAF  L  L  H+ +HTG+K + C  C  ++   
Sbjct: 867  LAKHKKI-HTGEK-----PYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFNQS 920

Query: 613  GGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALN 672
              L +H K +H G K  +             +E  +   + +T+         K   A  
Sbjct: 921  ANLTTH-KRIHTGEKPYK------------CEECGRAFSQSSTL------TAHKIIHAGE 961

Query: 673  KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
            KP+KC++C + F     L  HK++H  + ++ C  CGK F
Sbjct: 962  KPYKCEECGKAFSQSSTLTTHKIIHTGEKFYKCEECGKAF 1001

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|358417000|ref|XP_003583536.1| PREDICTED: zinc finger protein 836-like [Bos taurus]

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 208/642 (32%), Positives = 309/642 (48%), Gaps = 67/642 (10%)

Query: 96   KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            KP+KCD+C + FL K +L  H+ +HT E    C+ CG+ F  K  LL H   H+ +KP+ 
Sbjct: 706  KPYKCDECGKAFLVKSILLSHQTVHTGEKPYKCDDCGKAFHAKSSLLRHQTIHTGQKPYK 765

Query: 155  CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
            C  C K F+ K ++  H + +H G+K      YKC  C KAF   +AL  HQ +HTG+K 
Sbjct: 766  CDECGKVFRAKSKLLTH-QTIHTGQK-----PYKCDECGKAFHTKSALLTHQTIHTGEKP 819

Query: 215  HMCNLCSARFTCKGALLGHIKVLHEGYKRPQ-ESCQSSHESKTC--------SVDEINKE 265
            + C+ C   F  K  LL H + +H G K  + + C  +   K+         + +   K 
Sbjct: 820  YKCDECGKAFRVKSMLLSH-QTIHTGQKPYKCDECGKAFRVKSSLLRHQTIHTGERPYKC 878

Query: 266  NEEGATIR---KVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTC 322
            +E G   R   K+  H+ S       KP+KCDDC + F +K  L  H+  +H  +  + C
Sbjct: 879  DECGKLFRAKSKLLTHQTSH---TGQKPYKCDDCGKAFHAKSALLTHQ-TIHTREKPYKC 934

Query: 323  NSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
            + CG  F  K  L  H   H+ +KP+ C  CGK F+ ++ +++HQ +H  +K    YKC 
Sbjct: 935  DECGRAFHAKSKLLTHQTIHTGEKPYKCDECGKAFRLKSFLLSHQTVHTGEK---PYKCD 991

Query: 383  LCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQ----- 437
             C + F   +    HQ +HTGQK   C +C  +F+    L  H   VH G K  +     
Sbjct: 992  ECGKAFADSSYFRKHQKIHTGQKLFKCHICDKVFSRKAYLAGHQS-VHSGEKPYKCDECG 1050

Query: 438  ------SCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRF 491
                  S   SH+ +  + ++  K  E G      +     +   +  KP+KCD+C + F
Sbjct: 1051 KAFLVKSILLSHQ-RVHTGEKPYKCGECGKAFTDSEHLAGHQRVHSGEKPYKCDECGKAF 1109

Query: 492  LTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQ 551
              K +L  H+ +H  +  + C+ CGK F  +  LRRH  IH+  + F C +C K F+R +
Sbjct: 1110 RVKSILLIHQTVHTGEKPYKCDECGKAFTDRSHLRRHQKIHTGQKLFKCDICDKVFRRSK 1169

Query: 552  DVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYAT 611
             +AGH + VH G+     K YKC  C KAF     L  HQ VHTG+K + C  C  ++  
Sbjct: 1170 QLAGH-QSVHSGE-----KPYKCDECGKAFRVKSTLLRHQTVHTGEKPYKCDECDKAFRV 1223

Query: 612  IGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYM-A 670
               L SH + VH G K                    K +E G   R VKP     + +  
Sbjct: 1224 KSMLLSH-QTVHTGEKPY------------------KCDECGKAFR-VKPILLRHQTVHT 1263

Query: 671  LNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
              KP+KCD+C + F  K  L  H+ +H  +  + C+ CGK F
Sbjct: 1264 GEKPYKCDECGKVFRVKSFLLSHQTIHTGQKPYKCDECGKAF 1305

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440891309|gb|ELR45080.1| Zinc finger protein 845, partial [Bos grunniens mutus]

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 200/629 (31%), Positives = 294/629 (46%), Gaps = 67/629 (10%)

Query: 95  NKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
            KP+KCD+C + F TK  L  H+ +HT E    CN CG+ FR K  LL H   HS EKP+
Sbjct: 235 QKPYKCDECGKAFHTKSALLTHQTIHTGEKPYKCNECGKAFRVKSSLLRHQTVHSGEKPY 294

Query: 154 SCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
            C  C K F+ K  + +H + +H G+     K YKC  C KAF   +AL  HQ +HTG+K
Sbjct: 295 KCDECGKAFRVKSSLLRH-QTIHTGQ-----KPYKCDECGKAFHTKSALLTHQTIHTGEK 348

Query: 214 SHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIR 273
              CN C   F  K +LL H + +H G              K    DE  K     +++ 
Sbjct: 349 PSKCNECGKAFRVKSSLLRH-QTVHSG-------------EKPYKCDECGKAFRVKSSLL 394

Query: 274 KVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKK 333
           +       +      KP+KCD+C + F ++  L  H + +H  +  + C+ CG  F  K 
Sbjct: 395 R------HQTIHTGQKPYKCDECGKVFRAESKLLTH-QTIHTGQKPYKCDECGKAFHTKS 447

Query: 334 YLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAA 393
            L  H   H+ +KP+ C+ CGK F+ ++ ++ HQ +H  +   K YKC  C + F   +A
Sbjct: 448 ALLTHQTIHTGEKPYKCNECGKAFRVKSSLLRHQTIHTGQ---KPYKCDECGKAFHTKSA 504

Query: 394 LEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQ--SCQSSHESKTC--- 448
           L  HQ +HTG+K   C  C   F     L  H + VH G K  +   C  +  +K+    
Sbjct: 505 LLTHQTIHTGEKPSKCNECGKAFRVKSSLLRH-QTVHSGEKPYKCDDCGKAFHAKSSLLR 563

Query: 449 -----SVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLL 503
                S ++  K ++ G            +   +  KP+KCDDC + F  K  L +H+ +
Sbjct: 564 HQTVHSGEKPYKCDDCGKAFHAKSSLLRHQTVHSGEKPYKCDDCGKAFHAKSSLLRHQTV 623

Query: 504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQG 563
           H  +  + C+ CGK F  K  L RH  +HS  +P+ C  C K F  K  +  H + +H G
Sbjct: 624 HSGEKPYKCDDCGKAFHAKSSLLRHQTVHSGEKPYKCDECGKAFHTKSALLTH-QTIHTG 682

Query: 564 KKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH 623
           +     K YKC+ C KAF    +L  HQ +HTGQK + C  C  ++ T   L +H + +H
Sbjct: 683 E-----KPYKCNECGKAFRVKSSLLRHQTIHTGQKPYKCDECGKAFHTKSALLTH-QTIH 736

Query: 624 HGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQR 683
            G K                    K NE G   R        +   +  KP+KCD+C + 
Sbjct: 737 TGEKPY------------------KCNECGKAFRVKSSLLRHQTVHSGEKPYKCDECGKV 778

Query: 684 FLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
           F  K  L  H+ +H  +  + C+ CGK F
Sbjct: 779 FRVKSFLLSHQTIHTGQKPYKCDECGKAF 807

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	712
UNIPROTKB|F1N5B8	932	F1N5B8 "Uncharacterized protei	0.831	0.635	0.323	3.6e-82
UNIPROTKB|F1MJE7	1173	F1MJE7 "Uncharacterized protei	0.837	0.508	0.315	2.2e-81
UNIPROTKB|F1MQS9	842	LOC100847180 "Uncharacterized	0.837	0.707	0.313	2.5e-81
UNIPROTKB|A8MXY4	1036	ZNF99 "Zinc finger protein 99"	0.800	0.550	0.309	6.6e-81
UNIPROTKB|O43345	1167	ZNF208 "Zinc finger protein 20	0.917	0.559	0.302	1e-80
UNIPROTKB|I3L1B3	1173	ZNF729 "Zinc finger protein 72	0.880	0.534	0.299	6.9e-80
UNIPROTKB|A6NN14	1173	ZNF729 "Zinc finger protein 72	0.889	0.539	0.297	3.3e-79
ZFIN|ZDB-GENE-071004-104	1011	zgc:173517 "zgc:173517" [Danio	0.821	0.578	0.315	1.1e-78
UNIPROTKB|F1MV65	908	Bt.90142 "Uncharacterized prot	0.884	0.693	0.301	6.2e-78
UNIPROTKB|F1MVJ7	903	F1MVJ7 "Uncharacterized protei	0.891	0.703	0.305	6.2e-78

UNIPROTKB|F1N5B8 F1N5B8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 211/653 (32%), Positives = 313/653 (47%)

Query:    96 KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
             KP+KCDDC + F  K  L +H+ +HT +    C+ CG+ FR K +LL H   H+ +KP+ 
Sbjct:   240 KPYKCDDCGKAFHAKSSLLRHQTIHTGQKPYKCDECGKVFRAKSKLLTHQTIHTGQKPYK 299

Query:   155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
             C  C K F  K  +  H  I H G+K      YKC  C KAF   + L  HQ +HTGQK 
Sbjct:   300 CDECGKAFHTKSALLTHQTI-HTGEK-----PYKCDECGKAFRVKSMLLSHQTIHTGQKP 353

Query:   215 HMCNLCSARFTCKGALLGH--IKVLHEGYK--------RPQESC---QSSHES-KTCSVD 260
             + C+ C   F  K +LL H  I      YK        R +      Q+SH   K    D
Sbjct:   354 YKCDECGKAFRVKSSLLRHQTIHTGERPYKCDECGKLFRAKSKLLTHQTSHTGQKPYKCD 413

Query:   261 EINKE-NEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGG 319
             +  K  + + A +     H  ++E     KP+KCD+C + F +K  L  H+  +H  +  
Sbjct:   414 DCGKAFHAKSALLTHQTIH--TRE-----KPYKCDECGRAFHAKSKLLTHQT-IHTGEKP 465

Query:   320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
             + C+ CG  F  K +L +H   H+ +KP+ C  CGK F   +    HQ++H  +K++K  
Sbjct:   466 YKCDECGKAFRLKSFLLSHQTVHTGEKPYKCDECGKAFADSSYFRKHQKIHTGQKLFK-- 523

Query:   380 KCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSC 439
              C +C +VF+  A L  HQ VH+G+K   C  C   F     L SH + VH G K  +  
Sbjct:   524 -CHICDKVFSRKAYLAGHQSVHSGEKPYKCDECGKAFLVKSILLSHQR-VHTGEKPYKCG 581

Query:   440 QSSHESKTCSVDEINKENEEGATIRKVKPHED---SKEYMALN-------KPFKCDDCDQ 489
             +        S    +++   G  + K    +      E++A +       KP+KCD+C +
Sbjct:   582 ECGKAFTDRSQLRRHQKIHTGQKLFKCDICDKVFIRSEHLAGHQRVHSGEKPYKCDECGK 641

Query:   490 RFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKR 549
              F  K +L  H+ +H  +  + C+ CGK F  +  LRRH  IH+  + F C +C K F+R
Sbjct:   642 AFRVKSILLIHQTVHTGEKPYKCDECGKAFTDRSHLRRHQKIHTGQKLFKCDICDKVFRR 701

Query:   550 KQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASY 609
              + +AGH  V H G+K      YKC  C KAF     L  HQ VHTG+K + C  C  ++
Sbjct:   702 SKQLAGHQSV-HSGEK-----PYKCDECGKAFRVKSTLLRHQTVHTGEKPYKCDECDKAF 755

Query:   610 ATIGGLRSHIKIVHHGLKTQQ--SCQSSHESK-------TCSVDEINKENEEGATIRKVK 660
                  L SH + VH G K  +   C  +   K       T    E   + +E   + +VK
Sbjct:   756 RVKSMLLSH-QTVHTGEKPYKCDECGKAFRVKPILLRHQTVHTGEKPYKCDECGKVFRVK 814

Query:   661 PHEDSKEYMALN-KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
                 S + +    KP+KCD+C + F  K  L +H+ +H  +  + C+ CGK F
Sbjct:   815 SFLLSHQTIHTGQKPYKCDECGKAFRVKSSLLRHQTVHTGEKPYKCDECGKAF 867

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MJE7 F1MJE7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 819 (293.4 bits), Expect = 2.2e-81, P = 2.2e-81
 Identities = 206/652 (31%), Positives = 312/652 (47%)

Query:    96 KPFKCDDCDQCFLTKILLNKHKLLHTEGHL-TCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
             KP+KCD+C + F  +  L +H+ +HT   L  C++C + FR+  +L  H   HS EKP+ 
Sbjct:   473 KPYKCDECGKAFTDRSHLRRHQKIHTGQKLFKCDICDKVFRRSKQLAGHQSVHSGEKPYK 532

Query:   155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
             C  C K F+ K  +  H + VH G+K      YKC  C KAFT  + L  HQ +HTG+K 
Sbjct:   533 CDECGKAFRVKSILLIH-QTVHTGEK-----PYKCDECGKAFTDRSHLRRHQKIHTGEKP 586

Query:   215 HMCNLCSARFTCKGALLGH--IKVLHEGYKRPQESCQSSHESKT---C--SVDEINKE-- 265
             + C+ C   F  K  LL H  +    + YK   ++C      K+   C  ++    K   
Sbjct:   587 YKCDECGKAFRVKSTLLRHQTVHTGEKPYKC--DACGKVFRVKSFLLCHQTIHTGQKPYK 644

Query:   266 -NEEGATIRKVKPHE--DSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTC 322
              +E G   R  +P +    K      KP+KCD+C + F   +      + +H  +  + C
Sbjct:   645 CDECGKAFRVNQPSQFLTHKRLHTGEKPYKCDECGKAFRRNLSNVSSHQTVHTGEKPYKC 704

Query:   323 NSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
             + CG  F  K  L +H   H+ +KP+ C  CGK F   + +  HQ++H  +K++K   C 
Sbjct:   705 DECGKAFRVKSILLSHQTVHTGEKPYKCDECGKTFTHSSNLRRHQKIHTGQKLFK---CD 761

Query:   383 LCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSS 442
             +C +VF+    L  HQ VH+G+K   C  C   F     L  H + VH G K  + C   
Sbjct:   762 ICDKVFSRSEQLAGHQSVHSGEKPYKCDECGKAFRVKSILLRH-QTVHTGEKPYK-CDEC 819

Query:   443 HESKTCSVD-EINKENEEGATIRKVKPHE---DSKEYMALN-------KPFKCDDCDQRF 491
              ++ T S +   +++   G  + K    +      E++A +       KP+KCD+CD+ F
Sbjct:   820 GKAFTHSSNLRRHQKIHTGQKLFKCDICDKVFSRSEHLAGHQSVHSGAKPYKCDECDKAF 879

Query:   492 LTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQ 551
               K +L  H+ +H  +  + C  CGK F H   LRRH  IH+  + F C +C K F R +
Sbjct:   880 RVKSILLIHQTVHTGEKPYKCEECGKAFTHSSNLRRHQKIHTGQKLFKCDICDKVFNRSE 939

Query:   552 DVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYAT 611
              +AGH  V H G+K      YKC  C KAF     L  HQ VHTG+K + C  C  ++  
Sbjct:   940 QLAGHQSV-HSGEK-----PYKCDECGKAFRVKSILLRHQTVHTGEKPYKCDECGKAFRV 993

Query:   612 IGGLRSHIKIVHHGLKTQQ--SCQSSHESKTCSV--------DEINKENEEGATIRKVKP 661
                L  H + VH G K  +   C  +   K+  +        ++  K NE G   R VK 
Sbjct:   994 KSTLLRH-QTVHTGEKPYKCDECGKAFRVKSMLLSHQTVHTGEKPYKCNECGKAFR-VKA 1051

Query:   662 HEDSKEYMALN-KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
                  + +    KP+KCD+C + F  K +L  H+ +H  +  + C+ CGK F
Sbjct:  1052 ILFRHQTVHTGEKPYKCDECGKAFRVKSMLLSHQTVHTGEKPYKCDECGKAF 1103

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MQS9 LOC100847180 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 203/648 (31%), Positives = 307/648 (47%)

Query:    96 KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
             KP+KCD+C + F  K +L  H+ +HT E    C+ CG+ F    +L  H   H+ +K F 
Sbjct:   172 KPYKCDECGKAFCGKSILLSHQTVHTGEKPYKCDGCGKAFTHSSQLRRHKKIHTGKKLFK 231

Query:   155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
             C IC K F +   ++ H + VH G+K      YKC  C KAF   + L  HQ VHTG+K 
Sbjct:   232 CDICDKVFSKNSNLAGH-QTVHTGEK-----PYKCDECGKAFRVKSNLLKHQTVHTGEKR 285

Query:   215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQ-ESCQS--SHESKTCSVDEIN------KE 265
             + C+ C    T    L  H K+ H G K  + + C+      +K      ++      K 
Sbjct:   286 YKCDECGKALTHSSHLRRHKKI-HTGKKLFKCDICEKVFKRNAKLAGHQRVHTREKRYKC 344

Query:   266 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSC 325
              E G   R        +      KP+KCD+C + F     L +HKK +H  K  F C+ C
Sbjct:   345 GECGEAFRLKSTLLSHQTVHTGEKPYKCDECGKVFTHSSQLRRHKK-IHTGKKLFKCDIC 403

Query:   326 GLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCP 385
               +FS+   L  H   H+ +KP+ C  CGK F+ ++ ++ HQ +H  +K    YKC  C 
Sbjct:   404 DKVFSKNSNLAGHQTVHTGEKPYKCDECGKAFRVKSNLLQHQTVHTGEK---PYKCDECG 460

Query:   386 RVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQ--SCQSSH 443
             + F+H + L  H+ +HTG+K   C +C  +F+    L  H + VH G K  +   C  + 
Sbjct:   461 KAFSHSSHLRRHKKIHTGKKLFKCDICDKVFSKNSNLAGH-QTVHTGEKPYKCDECGKAF 519

Query:   444 ESKT--CSVDEIN------KENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKI 495
               K+   S   ++      K  E G   R        +      KP+KC+ C + F  K 
Sbjct:   520 RVKSNLLSHQTVHTGEKPYKCGECGEAFRLKSTLLSHQTVHTGEKPYKCE-CGEAFRLKS 578

Query:   496 LLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAG 555
              L  H+ +H  +  + C  CGK F H  +LRRH  IH+  + F C +C K F R  ++AG
Sbjct:   579 TLLSHQTVHTGEKPYKCGECGKAFTHSSQLRRHKKIHTGKKLFKCDICDKVFSRNSNLAG 638

Query:   556 HDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGL 615
             H + VH G+K      YKC  C KAF     L  HQ VHTG+K + C  C  ++     L
Sbjct:   639 H-QTVHTGEK-----PYKCDECGKAFRVKSTLLMHQAVHTGEKPYKCDECGKAFGVKSSL 692

Query:   616 RSHIKIVHHGLKTQQ--SCQSSHESKTCSV--------DEINKENEEGATIRKVKPHEDS 665
               H + VH G K  +   C ++  +K+  +        ++  K +E G   R +K +  +
Sbjct:   693 LQH-QTVHTGEKPYKCDECGTAFSAKSTLLRHQTVHTGEKPYKCDECGKAFR-LKSYVLN 750

Query:   666 KEYMALN-KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
              + +    KP+KCD+C + F  K  L  H+ LH  +  + C+ CG+ F
Sbjct:   751 HQTVHTGEKPYKCDECGKAFCVKSKLLSHQTLHTGEKPYKCDECGEAF 798

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A8MXY4 ZNF99 "Zinc finger protein 99" [Homo sapiens (taxid:9606)]

 Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
 Identities = 201/650 (30%), Positives = 305/650 (46%)

Query:    96 KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
             KP KC++C + F     L KHK++HT +    C  CG+ F     L+ H I H+ +KP+ 
Sbjct:   416 KPCKCEECGKAFKHFSALRKHKIIHTGKKPYKCEECGKAFNNSSTLMKHKIIHTGKKPYK 475

Query:   155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
             C  C K FK+   +++H + +H G+K      YKC  C KAF H +AL  HQ +HTG+K 
Sbjct:   476 CEECGKAFKQSSHLTRH-KAIHTGEK-----PYKCEECGKAFNHFSALRKHQIIHTGKKP 529

Query:   215 HMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRK 274
             + C  C   F+    L  H +++H G K P + C+   ++   S            T  K
Sbjct:   530 YKCEECGKAFSQSSTLRKH-EIIHTGEK-PYK-CEECGKAFKWS---------SHLTRHK 577

Query:   275 VKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKY 334
             V   E+        KP+KC++C + F     L +HK  +H  K  + C  CG  FS+   
Sbjct:   578 VIHTEE--------KPYKCEECGKAFNHFSALRKHKI-IHTGKKPYKCEECGKAFSQSST 628

Query:   335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
             LR H I H+ +KP+ C  CGK FK  + +  H+ +H  +K     KC  C + F H +AL
Sbjct:   629 LRKHEIIHTGEKPYKCEECGKAFKWSSKLTVHKVIHTAEK---PCKCEECGKAFKHFSAL 685

Query:   395 EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQ--QSCQ-SSHE-----SK 446
               H+ +HTG+K   C  C   F +   LR H +I+H G K+   + C    HE      K
Sbjct:   686 RKHKIIHTGKKPYKCEECGKAFNNSSTLRKH-EIIHTGEKSYKCEECALRKHEIIHTGKK 744

Query:   447 TCSVDEINKENEEGATIRK-------VKPH---EDSKEYM---------ALN---KPFKC 484
                 +E  K     +T+RK        KP+   E  K +          A++   KP+KC
Sbjct:   745 PYKCEECGKAFNNSSTLRKHKIIYTGKKPYKCEECGKAFKQSSHLTRHKAVHTGEKPYKC 804

Query:   485 DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCK 544
              +C + F     L KHKL+H  +  + C  CGK F +   LR+H +IH+  +P+ C  C+
Sbjct:   805 GECGKAFNNSSTLKKHKLIHTREKSYKCEECGKAFSNFSALRKHKIIHTGEKPYKCEECE 864

Query:   545 --KQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
               K F     +  H +++H G+K      YKC  C K F     L  H+ +HTG+K + C
Sbjct:   865 CGKAFNNSSTLMKH-KIIHTGEK-----PYKCEECGKGFNNFSTLMKHKIIHTGEKPYKC 918

Query:   603 TMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPH 662
               C  ++     L  H K +H G K  + C+     K  S    ++  +        KP+
Sbjct:   919 EECGKAFKQSSHLTKH-KSIHTGEKPYK-CEE--RGKAFS--HFSRLTKHRIIHTGKKPY 972

Query:   663 EDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
             +  +      KP+KC++C + F     L +HK +H     + C  CGK F
Sbjct:   973 KCEE----CEKPYKCEECGKAFNQSSHLTQHKTIHTGGKTYKCEECGKAF 1018

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|O43345 ZNF208 "Zinc finger protein 208" [Homo sapiens (taxid:9606)]

 Score = 813 (291.2 bits), Expect = 1.0e-80, P = 1.0e-80
 Identities = 214/707 (30%), Positives = 327/707 (46%)

Query:    40 TNEKLN--ERKILVWKKISGKLSHET-EARTHKLNEKEESTTKKKVNTHGASKENVALNK 96
             T EK N  E     + K+S   +H+   A       KE      KV+T    K   A  K
Sbjct:   280 TGEKPNKCEECGKAFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKVSTLITHKAIHAGEK 339

Query:    97 PFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
             P+KC +C + F    +L KHK++HT E    C  CG+ ++    L  H   H+ EKP+ C
Sbjct:   340 PYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPSTLSYHKKIHTGEKPYKC 399

Query:   156 PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSH 215
               C K F     ++KH+ ++H G+K      YKC  C KAF   + L +H+ +HTG+  +
Sbjct:   400 EECGKGFSMFSILTKHE-VIHTGEK-----PYKCEECGKAFNWSSNLMEHKKIHTGETPY 453

Query:   216 MCNLCSARFTCKGALLGHIKV--LHEGYKRPQESC-QSSHES------KTCSVDEINKEN 266
              C  C   F+    L  H K+  + + YK   E C ++ ++S      K     E   + 
Sbjct:   454 KCEECGKGFSWSSTLSYHKKIHTVEKPYKC--EECGKAFNQSAILIKHKRIHTGEKPYKC 511

Query:   267 EE-GATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSC 325
             EE G T  KV      K   A  KP+KC +C + F+    L  HK  +H  +  + C  C
Sbjct:   512 EECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKTFIKVSTLTTHKA-IHAGEKPYKCKEC 570

Query:   326 GLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCP 385
             G  FS+   L  H + H+ +KP+ C  CGK F   + ++ H+R+H  +K    YKC  C 
Sbjct:   571 GKAFSKFSILTKHKVIHTGEKPYKCEECGKAFNWSSNLMEHKRIHTGEK---PYKCEECG 627

Query:   386 RVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKI--VHHGLKTQQSCQSSH 443
             + F+  + L  H+ +HTG+K   C  C   +     L  H KI  V    K ++  ++ +
Sbjct:   628 KSFSTFSVLTKHKVIHTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFN 687

Query:   444 ES------KTCSVDEINKENEE-GATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKIL 496
              S      K    DE   + EE G T  KV      K   A  KP+KC +C + F    +
Sbjct:   688 RSAILIKHKRIHTDEKPYKCEECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKFSI 747

Query:   497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
             L KHK++H  +  + C  CGK +     L  H  IH+  +P+ C  C K F     +  H
Sbjct:   748 LTKHKVIHTGEKPYKCEECGKAYKWPSTLSYHKKIHTGEKPYKCEECGKGFSMFSILTKH 807

Query:   557 DRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLR 616
             + V+H G+K      YKC  C KAF++L     H+  H G+K + C  C  +Y T   L 
Sbjct:   808 E-VIHTGEK-----PYKCEECGKAFSWLSVFSKHKKTHAGEKFYKCEACGKAYNTFSILT 861

Query:   617 SHIKIVHHGLKTQQSCQSSHESKTCSVDEI-NKENEEGATIRKVKPHEDS-------KEY 668
              H K++H G K  + C+   ++   S + + +K+   G T  K +  + +        E+
Sbjct:   862 KH-KVIHTGEKPYK-CEECGKAFNWSSNLMEHKKIHTGETPYKCEECDKAFSWPSSLTEH 919

Query:   669 MALN---KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
              A +   KP+KC++C + F     L +HK  H  ++ + C  CGK F
Sbjct:   920 KATHAGEKPYKCEECGKAFSWPSRLTEHKATHAGEEPYKCEECGKAF 966

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0003677 "DNA binding" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

UNIPROTKB|I3L1B3 ZNF729 "Zinc finger protein 729" [Homo sapiens (taxid:9606)]

 Score = 806 (288.8 bits), Expect = 6.9e-80, P = 6.9e-80
 Identities = 207/691 (29%), Positives = 311/691 (45%)

Query:    58 KLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHK 117
             K+ H TE + +K   K+     K  +T    K       PF+C++C + F     L  HK
Sbjct:   227 KIIH-TEDKPYKY--KKCGNAFKFSSTFTKHKRIHTGETPFRCEECGKAFNQSSNLTDHK 283

Query:   118 LLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVH 176
              +HT E    C  CG+ F+       H + H+ EKP+ C  C K F     + KH +I+H
Sbjct:   284 RIHTGEKTYKCEECGKAFKGSSNFNAHKVIHTAEKPYKCEDCGKTFNHFSALRKH-KIIH 342

Query:   177 QGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
              GKK      YK   C KAF+  + L  H+ +HTG+K + C  C   F     L  H KV
Sbjct:   343 TGKK-----PYKREECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSKLTVH-KV 396

Query:   237 LHEGYKRPQ-ESCQSSHES----KTCSVDEINKEN---EE-GATIRKVKPHEDSKEYMAL 287
             +H G K  + E C  +       K   +    K+    EE G            K     
Sbjct:   397 VHTGEKPYKCEECGKAFSQFSTLKKHKIIHTGKKPYKCEECGKAFNSSSTLMKHKIIHTG 456

Query:   288 NKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKP 347
              KP+KC++C + F     L +HK  +H  +  + C  CG  F+    LR H I H+ +KP
Sbjct:   457 EKPYKCEECGKAFRQSSHLTRHKA-IHTGEKPYKCEECGKAFNHFSDLRRHKIIHTGKKP 515

Query:   348 FSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTR 407
             + C  CGK F + + + NHQ +H  +K    YKC  C + F   + L  H+ +HTG+K  
Sbjct:   516 YKCEECGKAFSQSSTLRNHQIIHTGEK---PYKCEECGKAFKWSSKLTVHKVIHTGEKPC 572

Query:   408 LCTMCPAIFASIGGLRSHMKIVHHGLKTQ--QSC-QSSHESKTCSVDEI---NKEN---E 458
              C  C   F     LR H K++H   K    + C ++ + S   +  +I    K+    E
Sbjct:   573 KCEECGKAFKHFSALRKH-KVIHTREKLYKCEECGKAFNNSSILAKHKIIHTGKKPYKCE 631

Query:   459 E-GATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGK 517
             E G   R+       K      KP+KC++C + F     L +HK++H  K  + C  CGK
Sbjct:   632 ECGKAFRQSSHLTRHKAIHTGEKPYKCEECGKAFSHFSALRRHKIIHTGKKPYKCEECGK 691

Query:   518 TFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLC 577
              F H   LRRH +IH+  +P+ C  C K FK    +  H +V+H  +K       KC  C
Sbjct:   692 AFSHFSALRRHKIIHTGEKPYKCEECGKAFKWSSKLTVH-KVIHTAEK-----PCKCEEC 745

Query:   578 PKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ--QSCQSS 635
              K+F +  AL  H+ +HT +K + C  C  ++ +   L  H K++H G K    + C  +
Sbjct:   746 GKSFKHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKH-KVIHTGEKPYKCEECGKA 804

Query:   636 ---------HE-----SKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCD 681
                      H+      K C  +E  K  +  + +RK K     K      KP+KC++C 
Sbjct:   805 FKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKVIHTGK------KPYKCEECG 858

Query:   682 QRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
             + F     L KH+++H  +  + C  CGK F
Sbjct:   859 KAFSQSSSLRKHEIIHSGEKPYKCEECGKAF 889

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A6NN14 ZNF729 "Zinc finger protein 729" [Homo sapiens (taxid:9606)]

 Score = 800 (286.7 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 204/685 (29%), Positives = 312/685 (45%)

Query:    58 KLSHETEARTHKLNEKEESTTKKKVNTHGASKENVALNKPFKCDDCDQCFLTKILLNKHK 117
             K+ H TE + +K   K+     K  +T    K       PF+C++C + F     L  HK
Sbjct:   227 KIIH-TEDKPYKY--KKCGNAFKFSSTFTKHKRIHTGETPFRCEECGKAFNQSSNLTDHK 283

Query:   118 LLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVH 176
              +HT E    C  CG+ F+       H + H+ EKP+ C  C K F     + KH +I+H
Sbjct:   284 RIHTGEKTYKCEECGKAFKGSSNFNAHKVIHTAEKPYKCEDCGKTFNHFSALRKH-KIIH 342

Query:   177 QGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
              GKK      YK   C KAF+  + L  H+ +HTG+K + C  C   F     L  H KV
Sbjct:   343 TGKK-----PYKREECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSKLTVH-KV 396

Query:   237 LHEGYKRPQ-ESCQSSHES----KTCSVDEINKEN---EE-GATIRKVKPHEDSKEYMAL 287
             +H G K  + E C  +       K   +    K+    EE G            K     
Sbjct:   397 VHTGEKPYKCEECGKAFSQFSTLKKHKIIHTGKKPYKCEECGKAFNSSSTLMKHKIIHTG 456

Query:   288 NKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKP 347
              KP+KC++C + F     L +HK  +H  +  + C  CG  F+    LR H I H+ +KP
Sbjct:   457 EKPYKCEECGKAFRQSSHLTRHKA-IHTGEKPYKCEECGKAFNHFSDLRRHKIIHTGKKP 515

Query:   348 FSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTR 407
             + C  CGK F + + + NHQ +H  +K    YKC  C + F   + L  H+ +HTG+K  
Sbjct:   516 YKCEECGKAFSQSSTLRNHQIIHTGEK---PYKCEECGKAFKWSSKLTVHKVIHTGEKPC 572

Query:   408 LCTMCPAIFASIGGLRSHMKIVHHGLKTQ--QSC-QSSHESKTCSVDEI---NKEN---E 458
              C  C   F     LR H K++H   K    + C ++ + S   +  +I    K+    E
Sbjct:   573 KCEECGKAFKHFSALRKH-KVIHTREKLYKCEECGKAFNNSSILAKHKIIHTGKKPYKCE 631

Query:   459 E-GATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGK 517
             E G   R+       K      KP+KC++C + F     L +HK++H  K  + C  CGK
Sbjct:   632 ECGKAFRQSSHLTRHKAIHTGEKPYKCEECGKAFSHFSALRRHKIIHTGKKPYKCEECGK 691

Query:   518 TFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLC 577
              F H   LRRH +IH+  +P+ C  C K FK    +  H +V+H  +K       KC  C
Sbjct:   692 AFSHFSALRRHKIIHTGEKPYKCEECGKAFKWSSKLTVH-KVIHTAEK-----PCKCEEC 745

Query:   578 PKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ--QSCQSS 635
              K+F +  AL  H+ +HT +K + C  C  ++ +   L  H K++H G K    + C  +
Sbjct:   746 GKSFKHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKH-KVIHTGEKPYKCEECGKA 804

Query:   636 HE-SKTCSVDEINKENEEGATIR---KVKPHEDS-KEYMALN---KPFKCDDCDQRFLTK 687
              + S   +V ++    E+        K   H  + +++  ++   KP+KC++C + F   
Sbjct:   805 FKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKAFHQS 864

Query:   688 ILLNKHKLLHFDKDYFSCNYCGKTF 712
               L KHK +H  +  + C  CGK F
Sbjct:   865 SKLAKHKKIHTGEKPYKCEECGKAF 889

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-071004-104 zgc:173517 "zgc:173517" [Danio rerio (taxid:7955)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 207/657 (31%), Positives = 317/657 (48%)

Query:    98 FKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCP 156
             ++C +C++ F     L  H+ +HT E    C+LC ++F Q   +  H   H+ EKP+ C 
Sbjct:   115 YRCFECNKTFCRAENLKIHERIHTGEKPYICSLCNKSFNQFAHMKTHARVHTGEKPYKCS 174

Query:   157 ICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHM 216
              C+K+F    ++ KH R VH G+K      YKCS C K F+ L  L  H+ +HTG+K ++
Sbjct:   175 YCEKRFTDSGDLRKHVR-VHTGEK-----PYKCSDCDKRFSDLGNLRKHERIHTGEKPYI 228

Query:   217 CNLCSARFTCKGALLGHIKVL--HEGYK--------------RPQESCQSSHESKTCSVD 260
             C+ C  RF+  G L  H+++    + YK              R  E   +  +   CS  
Sbjct:   229 CSHCDKRFSDLGNLKKHVRIYTGEKPYKCSYCDKRFSDSGNLRQHERVHTGEKPYKCS-- 286

Query:   261 EINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCF-QCFLSKILLNQHKKQMHFNKGG 319
               +K   +   +R+   HE  K +    KP+KC  C  +   +K  L  H + +H  +  
Sbjct:   287 HCDKRFSDSGNLRQ---HE--KIHTG-EKPYKCSHCCGKSLTNKQSLKSHMR-IHTGEKP 339

Query:   320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
             FTC  CG  F    +L++H+  H+ +KP+ CS+CGK FK +  + NHQ++H      + Y
Sbjct:   340 FTCTQCGKTFLRASHLKSHLRVHTKEKPYPCSVCGKSFKHQRSLRNHQKIHTG---VREY 396

Query:   380 KCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSC 439
             KC  C + F    +L+ H+ +HTG+K  +C++C   F     +++H + VH G K  + C
Sbjct:   397 KCFECEKTFCTAESLKIHKRIHTGEKPYICSLCNNRFNQFAHMKTHAR-VHTGEKPYK-C 454

Query:   440 QSSHESKTCSVDEIN-KENEEGATIRK-VK-PHEDS--------KEYMALN---KPFKCD 485
               SH  K  S D  N +++E+  T  K  K  H D+        K +  ++   K  KCD
Sbjct:   455 --SHCDKRFS-DSGNLRQHEKIHTGEKPYKCSHCDTRFRQLGGLKTHERIHTGEKTHKCD 511

Query:   486 DCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKK 545
              C + FL    L  H  +H  K  + C+ CGK F  +  LR H  IH+    + C  C K
Sbjct:   512 QCGKTFLRASQLKSHLRVHTKKKLYPCSVCGKNFTRQESLRNHQKIHTGVGEYRCFECNK 571

Query:   546 QFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC 605
              F R +++  H RV H G+K      YKCS C K F+  G L  H+ +HTG+K + C+ C
Sbjct:   572 SFCRAENLKIHARV-HTGEK-----PYKCSHCDKKFSDSGNLRRHEKIHTGEKPYKCSHC 625

Query:   606 PASYATIGGLRSHIKIVHHGLK--TQQSCQSSHESKTCSVDEINKEN-EEGATIRKVKP- 661
                +  +GGL++H +  H G K  T   C  S  SK      +     E+  T  +    
Sbjct:   626 DTRFRQLGGLKTHER-THTGEKPFTCTQCGKSLASKQSLGYHMRVHTGEKPFTCSQCGKS 684

Query:   662 -HEDSK--EYMALN---KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
               E +K  ++M ++   KPF C  C   F     L +H L H  K    C+ CGKTF
Sbjct:   685 FRESAKLIKHMRIHTGEKPFTCSQCGMSFTDSSNLGRHMLTHTRKKKHRCDQCGKTF 741

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MV65 Bt.90142 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 209/694 (30%), Positives = 319/694 (45%)

Query:    46 ERKILVWKKISGKLSHETE-ARTHKLNEKEESTTKKKVNT---HGA--SKENVA-LNKPF 98
             ERKI    ++   +++ +  +   ++    ++ T         H +  +K++ A   KP+
Sbjct:   155 ERKIFECNQVENVINNSSSISALQRIPPSVQTNTSNMYGNNFIHSSILTKDHKAHREKPY 214

Query:    99 KCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPI 157
             +C+DCD+ F     L KH+++HT E    C+ CG+ F Q   L  H   H+ EKP+ C  
Sbjct:   215 RCNDCDKTFTHVSHLTKHQVVHTGERPYKCDTCGKDFSQSSNLATHRRIHTGEKPYKCNE 274

Query:   158 CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
             C K F RK  +  H RI H G+K      YKC++C KAF   ++L  HQ +HTG+K + C
Sbjct:   275 CGKDFNRKSNLETHQRI-HTGEK-----PYKCNVCGKAFRVCSSLRSHQVIHTGEKDYHC 328

Query:   218 NLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSH--ESKTCSVDEIN------KENEEG 269
             + C+  F+    LL H ++   G     ++C  +    S   +   I+      K  E G
Sbjct:   329 SKCNKAFSRNSKLLKHQRIHTRGQPYKCDACDKAFILRSSLINHQRIHTGEKPYKCTECG 388

Query:   270 ATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIF 329
                R+           A  KPFKC  C + F     L +H+  +H  +  + C  C   F
Sbjct:   389 KGFRQWSDIRIHLRIHAGEKPFKCSKCGKSFTRSSHLTRHQI-IHTGEKPYKCEVCDKFF 447

Query:   330 SEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFT 389
             S   +L  H   H+ +KP+ C+ CGK F   + +  HQ +H  +K   SYKC+ C + F 
Sbjct:   448 SRNSHLAGHWRIHTREKPYKCNECGKAFSDRSSLTYHQVIHTGEK---SYKCNECGKAFI 504

Query:   390 HLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQS--CQS--SHES 445
               + L  H+ +HTG++   CT C   F  +  LR H +I H G K  +   C    S  S
Sbjct:   505 KPSYLRHHERIHTGERPYKCTECGKAFIKLSRLRYHERI-HTGEKPYKCDICGKVFSGNS 563

Query:   446 KTCSVDEIN------KENEEGATIRKVKPHEDSKEYMALN-KPFKCDDCDQRFLTKILLN 498
                    ++      K  E G   R VK    S + +    K +KCD+C + F  K  L 
Sbjct:   564 NLAVHQRVHTGEKPYKCYECGKAFR-VKSILLSHQTVHTGEKLYKCDECGKAFRIKSYLL 622

Query:   499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDR 558
              H+ +H  +  + C+ CGK F  K  L  H  +H+  + + C  C K F+ K  +  H +
Sbjct:   623 SHQTVHTGEKPYKCDECGKAFRIKSSLLSHQTVHTGEKLYKCGECGKAFRIKSYLLSH-Q 681

Query:   559 VVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSH 618
              VH G+K      YKC  C KAF    A+  HQ VHTG+K + C  C  ++     L  H
Sbjct:   682 TVHTGEK-----PYKCDECGKAFCAKSAILSHQRVHTGEKPYKCDECGKAFPVKSTLLRH 736

Query:   619 IKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCD 678
              + VH G K  +          C  DE  K     +T+ K   H+         KP+KCD
Sbjct:   737 -QTVHTGEKPYK----------C--DECGKAFPIKSTLSK---HQTIHTG---EKPYKCD 777

Query:   679 DCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
             +C + F  K +L KH+ +H  +  + C+ CGK F
Sbjct:   778 ECGKAFRLKSILLKHQTIHTGEKPYKCDECGKAF 811

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MVJ7 F1MVJ7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 209/684 (30%), Positives = 314/684 (45%)

Query:    59 LSHETEARTHKLNEKEESTTKKKVNTHGASKENVALN-KPFKCDDCDQCFLTKILLNKHK 117
             ++ + +A   K  + +E     +V +   S + V    KP+KCD+C + F  K +L  H+
Sbjct:   220 VTQDLKAHREKSYKCDECGKAFRVKSTLLSHQTVHTGEKPYKCDECGKAFRLKSILLSHQ 279

Query:   118 LLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVH 176
              +HT E    C+ CG+ FR K  LL H   H+ EKP+ C  C K F+ K  +  H  I H
Sbjct:   280 TVHTGEKPYKCDECGKAFRLKSFLLTHQTVHTGEKPYKCDECGKAFRAKSTLLSHQTI-H 338

Query:   177 QGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
              G+K      YKC+ C K FTH + L  HQ +HTGQK   C++C   F+    L GH  V
Sbjct:   339 TGEK-----PYKCNECGKVFTHSSNLRRHQKIHTGQKLFKCHICDKVFSRSEHLAGHQSV 393

Query:   237 L--HEGYKRPQESCQSSHESKTCSVDEIN------KENEEGATIRKVKPHEDSKEYMALN 288
                 + YK  +     +  SK  S   ++      K +E G    +       K      
Sbjct:   394 HSGEKPYKCNECGKHFNQPSKFISHKRLHTGEKPYKCDECGKDFSQPSQFISHKRLHTGE 453

Query:   289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
             KP+KCD+C + F  K +L +H+  +H  +  + C+ CG  F  K  L +H   H+ +KP+
Sbjct:   454 KPYKCDECGKDFHVKSILLRHQT-VHTGEKPYKCDECGKAFRVKSILLSHQTVHTGEKPY 512

Query:   349 SCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRL 408
              C  CGK F   + +  HQ++H  +K++K   C +C +VF+    L  HQ VH+G+K   
Sbjct:   513 KCDECGKAFTDSSNLRRHQKIHTGQKLFK---CDICYKVFSEREQLAGHQSVHSGEKPYK 569

Query:   409 CTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRK--V 466
             C  C   F     L  H + VH G K  +  +S       S    N+    G    K  V
Sbjct:   570 CDECGIAFHVKSILLRH-QTVHTGEKPYKCDESGKAFHVKSTLLRNQRVHTGEKPYKCDV 628

Query:   467 KPHEDSKEYMALN--------KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKT 518
                  S++ + L+        K +KC +C + F  K +L  H+ +H ++  + C+ CG  
Sbjct:   629 CGKAFSEKSVLLSHQTVHTGEKLYKCVECGKAFRVKAILLTHQTVHTEEKPYKCDECGTA 688

Query:   519 FLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCP 578
             F  K  L  H  +H+  +P+ C  C K F  K  +  H + VH G+K      YKC  C 
Sbjct:   689 FRVKSMLLNHQTVHTGEKPYKCDECGKAFHEKSILFRH-QTVHTGEK-----PYKCDECD 742

Query:   579 KAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQ--SCQSSH 636
             KAF     L  HQ VHTGQK + C  C  ++     L SH + VH G K  +   C  + 
Sbjct:   743 KAFCVKSTLFRHQTVHTGQKPYKCDECGKAFCIKSILLSHQR-VHTGEKPYKCDECSKAF 801

Query:   637 ESK-------TCSVDEINKENEEGATIRKVKPHEDSKEYMALN-KPFKCDDCDQRFLTKI 688
               K       T    E   + +E   +   KPH      +    +PF+CD+C + F    
Sbjct:   802 RVKSTLLRHQTVHTGEKPYKCDECGKVFSQKPHLQLHWRIHTGERPFRCDECGKFFSRNS 861

Query:   689 LLNKHKLLHFDKDYFSCNYCGKTF 712
              L  H+ +H ++  F C  CGK+F
Sbjct:   862 HLTSHRRIHIEQP-FKCFKCGKSF 884

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	712
KOG1074|consensus	958		99.97
KOG1074|consensus	958		99.97
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.94
KOG3608|consensus	467		99.93
KOG2462|consensus	279		99.93
KOG3623|consensus	1007		99.9
KOG3623|consensus	1007		99.89
KOG3576|consensus	267		99.69
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.17
PLN03086	567	PRLI-interacting factor K; Provisional	99.11
PHA00733	128	hypothetical protein	99.0
PHA00733	128	hypothetical protein	98.91
PHA02768	55	hypothetical protein; Provisional	98.88
KOG3993|consensus	500		98.88
PHA02768	55	hypothetical protein; Provisional	98.75
KOG3993|consensus	500		98.74
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.66
KOG1146|consensus	1406		98.65
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.58
PHA00616	44	hypothetical protein	98.44
PHA00616	44	hypothetical protein	98.33
KOG1146|consensus	1406		98.22
PHA00732	79	hypothetical protein	98.11
PHA00732	79	hypothetical protein	98.03
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.9
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.79
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.6
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.55
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.31
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.26
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.24
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.19
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.17
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.05
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.96
smart00355	26	ZnF_C2H2 zinc finger.	96.81
KOG2231|consensus	669		96.74
KOG2231|consensus	669		96.56
smart00355	26	ZnF_C2H2 zinc finger.	96.34
PRK04860	160	hypothetical protein; Provisional	96.26
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.23
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.15
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.13
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.08
PRK04860	160	hypothetical protein; Provisional	96.05
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.97
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.96
COG5048	467	FOG: Zn-finger [General function prediction only]	95.91
KOG2785|consensus	390		95.74
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.69
KOG2482|consensus	423		95.53
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.18
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.07
COG5048	467	FOG: Zn-finger [General function prediction only]	95.06
KOG2785|consensus	390		94.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.67
KOG4173|consensus	253		94.4
KOG2482|consensus	423		92.68
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.93
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.54
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.17
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.89
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.11
KOG4173|consensus	253		88.44
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	88.33
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.16
KOG2893|consensus	341		87.92
KOG2893|consensus	341		86.09
COG4049	65	Uncharacterized protein containing archaeal-type C	85.56
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.54
PF15269	54	zf-C2H2_7: Zinc-finger	80.85
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.2

>KOG1074|consensus

Probab=99.97  E-value=1.4e-32  Score=281.72  Aligned_cols=208  Identities=26%  Similarity=0.517  Sum_probs=157.2

Q ss_pred             CceecCCChhhccChHHHHHHHhhhcCCCcccCCCCccccCChHHHHhHHHHhhcCCCCccccCCCCCCCcccccccccc
Q psy16830        377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKE  456 (712)
Q Consensus       377 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  456 (712)
                      .|-+|-+|.++..-.+.|+.|.++|+|++||+|++|+++|+++.+|+.|+ .+|....+.                    
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~--------------------  662 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPA--------------------  662 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccc--------------------
Confidence            45789999999999999999999999999999999999999999999999 556432221                    


Q ss_pred             ccccccccccCCCCCchhhhccCCCCCCc---chhhhhcchhhHhhccccccCCC-------------ccccCCCCcccC
Q psy16830        457 NEEGATIRKVKPHEDSKEYMALNKPFKCD---DCDQRFLTKILLNKHKLLHFDKD-------------YFSCNYCGKTFL  520 (712)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~h~~~~-------------~~~C~~C~k~f~  520 (712)
                                            .-++.|+   +|.+.|.+...|..|+++|.+..             .-+|..|.+.|.
T Consensus       663 ----------------------R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~  720 (958)
T KOG1074|consen  663 ----------------------RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFS  720 (958)
T ss_pred             ----------------------cccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccchhcccchhhhccc
Confidence                                  2457888   88888888888888888887321             146888888887


Q ss_pred             ChHHHhhhhhhcC----------------CCC----cccCcccccccCChhhHHhhhhhc--c-----------------
Q psy16830        521 HKYKLRRHIVIHS----------------TAR----PFSCPVCKKQFKRKQDVAGHDRVV--H-----------------  561 (712)
Q Consensus       521 ~~~~L~~H~~~H~----------------~~~----p~~C~~C~~~f~~~~~l~~H~~~~--h-----------------  561 (712)
                      ....+..++..|.                ++.    +..+..|+..+.....+..+--..  +                 
T Consensus       721 ~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~  800 (958)
T KOG1074|consen  721 DARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGE  800 (958)
T ss_pred             ccccchhhhhccCCcccCCcccccccccccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhh
Confidence            7777777765551                222    455666777666555544442211  0                 


Q ss_pred             ---cCcc------------------------------------------------------------------ccccCCc
Q psy16830        562 ---QGKK------------------------------------------------------------------LIVYKSY  572 (712)
Q Consensus       562 ---~~~~------------------------------------------------------------------~~~~~~~  572 (712)
                         ++++                                                                  ..++...
T Consensus       801 ~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h  880 (958)
T KOG1074|consen  801 EDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAH  880 (958)
T ss_pred             hcccCCCCcccccCCCcCCccccccCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchh
Confidence               0000                                                                  0011226


Q ss_pred             ccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCC
Q psy16830        573 KCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKT  628 (712)
Q Consensus       573 ~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  628 (712)
                      .|.+||+.|...++|+.|+++|+|+|||.|.+|++.|.++.+|+.||.+ |....+
T Consensus       881 ~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgt-H~w~q~  935 (958)
T KOG1074|consen  881 VCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGT-HMWVQP  935 (958)
T ss_pred             hhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhcc-ccccCC
Confidence            7999999999999999999999999999999999999999999999997 555443

>KOG1074|consensus

Probab=99.97  E-value=1.3e-31  Score=274.58  Aligned_cols=110  Identities=24%  Similarity=0.576  Sum_probs=97.9

Q ss_pred             CCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCC-CceecC---CChhhccChHH
Q psy16830        318 GGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVY-KSYKCS---LCPRVFTHLAA  393 (712)
Q Consensus       318 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~~~~C~---~C~~~f~~~~~  393 (712)
                      .+.+|-+|.++.+-++.|+.|+++|+|++||+|.+||+.|.++.+|+.|+-+|...-+. .++.|+   +|.+.|.+...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            46789999999999999999999999999999999999999999999999998765433 368999   99999999999


Q ss_pred             HHHHHhhhcCC-C------------cccCCCCccccCChHHHHhHHH
Q psy16830        394 LEDHQFVHTGQ-K------------TRLCTMCPAIFASIGGLRSHMK  427 (712)
Q Consensus       394 l~~H~~~h~~~-~------------~~~C~~C~~~f~~~~~l~~H~~  427 (712)
                      |..|+++|.+. .            .-+|..|.+.|.....+..++.
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~s  730 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQIS  730 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhh
Confidence            99999999842 1            2469999999999999998884

>KOG2462|consensus

Probab=99.94  E-value=1.4e-27  Score=216.24  Aligned_cols=104  Identities=32%  Similarity=0.634  Sum_probs=53.7

Q ss_pred             cccCCCCcccCChHHHhhhhhhcCC---CCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchh
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIVIHST---ARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGA  586 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~~H~~---~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~  586 (712)
                      |.|+.||+.+.+.++|.+|.++|..   .+.+.|++|++.|.+...|..|+|+ |+-       +.+|.+|||.|...--
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~l-------~c~C~iCGKaFSRPWL  202 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HTL-------PCECGICGKAFSRPWL  202 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cCC-------CcccccccccccchHH
Confidence            4444444444444444444444422   2334455555555555555555554 321       3555555555555555


Q ss_pred             HHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        587 LEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       587 L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      |+-|+|+|||||||.|..|+++|.++++|+.||++
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQT  237 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQT  237 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHh
Confidence            55555555555555555555555555555555555

>KOG3608|consensus

Probab=99.94  E-value=2.1e-26  Score=212.85  Aligned_cols=243  Identities=26%  Similarity=0.518  Sum_probs=189.9

Q ss_pred             CCCccC--CcchhhccCHHHHHHHHHhhccC------------C-CCccc--CcCccccCChhHHHHHHHhcCCCCCccC
Q psy16830        288 NKPFKC--DDCFQCFLSKILLNQHKKQMHFN------------K-GGFTC--NSCGLIFSEKKYLRNHMISHSTQKPFSC  350 (712)
Q Consensus       288 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~------------~-~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C  350 (712)
                      ...|.|  ..|+..|.+...+..|+.. |..            + ..+.|  ..|.+.|.+++.|++|++.|++++...|
T Consensus       132 g~~f~C~WedCe~~F~s~~ef~dHV~~-H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvAC  210 (467)
T KOG3608|consen  132 GQNFRCGWEDCEREFVSIVEFQDHVVK-HALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVAC  210 (467)
T ss_pred             hhhhccChhhcCCcccCHHHHHHHHHH-hhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEec
Confidence            345777  6899999999999999864 421            1 12445  4688999999999999999999999999


Q ss_pred             CcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHHHHHhhhcCCCcccCCCCccccCChHHHHhHHHHhh
Q psy16830        351 SLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVH  430 (712)
Q Consensus       351 ~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  430 (712)
                      +.||.-|+++..|..|++..+.-. ..+|+|..|.+.|.+...|..|+..|..  -|+|+.|+.+....++|..|++..|
T Consensus       211 p~Cg~~F~~~tkl~DH~rRqt~l~-~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rH  287 (467)
T KOG3608|consen  211 PHCGELFRTKTKLFDHLRRQTELN-TNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRH  287 (467)
T ss_pred             chHHHHhccccHHHHHHHhhhhhc-CCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhh
Confidence            999999999999999988765433 2389999999999999999999998864  5889999999999999999998766


Q ss_pred             cCCCCccccCCCCCCCccccccccccccccccccccCCCCCchhhhccCCCCCCcchhhhhcchhhHhhccccccCCCcc
Q psy16830        431 HGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYF  510 (712)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  510 (712)
                      ..                                              .+||+|+.|++.|.+.+.|.+|...|. +..|
T Consensus       288 s~----------------------------------------------dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y  320 (467)
T KOG3608|consen  288 SK----------------------------------------------DKPFKCDECDTRCVRESDLAKHVQVHS-KTVY  320 (467)
T ss_pred             cc----------------------------------------------CCCccccchhhhhccHHHHHHHHHhcc-ccce
Confidence            32                                              577888888888888888888888776 6678


Q ss_pred             ccCC--CCcccCChHHHhhhhhhcC-C--CCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCccc
Q psy16830        511 SCNY--CGKTFLHKYKLRRHIVIHS-T--ARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAF  581 (712)
Q Consensus       511 ~C~~--C~k~f~~~~~L~~H~~~H~-~--~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f  581 (712)
                      +|..  |.++|++...|++|++.++ |  +.+|.|..|++.|++-.+|..|++..|.-.-+.+.+.|.=.+|.-.|
T Consensus       321 ~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~  396 (467)
T KOG3608|consen  321 QCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGF  396 (467)
T ss_pred             ecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCce
Confidence            8877  8888888888888876544 3  34577777777777777777777777766555555555555555444

>KOG3608|consensus

Probab=99.93  E-value=6e-26  Score=209.86  Aligned_cols=253  Identities=25%  Similarity=0.462  Sum_probs=213.1

Q ss_pred             Cccc--CcCccccCC-hhHHHHHHHhcCC----------------------------------CCCccCC--cccccccC
Q psy16830        319 GFTC--NSCGLIFSE-KKYLRNHMISHST----------------------------------QKPFSCS--LCGKRFKR  359 (712)
Q Consensus       319 ~~~C--~~C~~~f~~-~~~l~~H~~~h~~----------------------------------~~~~~C~--~C~~~f~~  359 (712)
                      .++|  ..|++...+ ...|.+|.-.|--                                  ...|.|.  .|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            4666  568877766 5889999877620                                  0125664  59999999


Q ss_pred             hHHHHHHHHHhcCC----------CCCCceecC--CChhhccChHHHHHHHhhhcCCCcccCCCCccccCChHHHHhHHH
Q psy16830        360 ENGVINHQRLHQTK----------KVYKSYKCS--LCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMK  427 (712)
Q Consensus       360 ~~~l~~H~~~h~~~----------~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  427 (712)
                      ...+..|+..|..-          .....+.|.  .|.+.|.+++.|..|++.|++++...|+.|+..|.++..|..|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            99999999876421          111235564  599999999999999999999999999999999999999999997


Q ss_pred             HhhcCCCCccccCCCCCCCccccccccccccccccccccCCCCCchhhhccCCCCCCcchhhhhcchhhHhhccccccCC
Q psy16830        428 IVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDK  507 (712)
Q Consensus       428 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  507 (712)
                      +.-                                             .....+|.|..|.+.|.+...|..|+..|.. 
T Consensus       229 Rqt---------------------------------------------~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-  262 (467)
T KOG3608|consen  229 RQT---------------------------------------------ELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-  262 (467)
T ss_pred             hhh---------------------------------------------hhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-
Confidence            521                                             1113479999999999999999999999864 


Q ss_pred             CccccCCCCcccCChHHHhhhhh-hcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCc--CCcccCCc
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIV-IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYL  584 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~  584 (712)
                       -|+|++|+.+...+++|.+||+ .|+..+||+|+.|++.|.+.++|++|..+ |+..      .|+|..  |..+|.+.
T Consensus       263 -~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-HS~~------~y~C~h~~C~~s~r~~  334 (467)
T KOG3608|consen  263 -CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-HSKT------VYQCEHPDCHYSVRTY  334 (467)
T ss_pred             -cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-cccc------ceecCCCCCcHHHHHH
Confidence             5899999999999999999987 68889999999999999999999999996 6632      699999  99999999


Q ss_pred             hhHHhHHhhhc-C--CCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        585 GALEDHQFVHT-G--QKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       585 ~~L~~H~~~H~-~--~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      .+|..|++.+. |  +-+|.|..|++.|++-.+|.+|++..|.-
T Consensus       335 ~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  335 TQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             HHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            99999998655 5  45699999999999999999999998853

>KOG2462|consensus

Probab=99.93  E-value=1.4e-26  Score=209.82  Aligned_cols=136  Identities=35%  Similarity=0.677  Sum_probs=128.4

Q ss_pred             cCCCCCCcchhhhhcchhhHhhccccccC---CCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHH
Q psy16830        478 LNKPFKCDDCDQRFLTKILLNKHKLLHFD---KDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVA  554 (712)
Q Consensus       478 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~  554 (712)
                      ....|+|+.||+.+.+.++|.+|..+|..   .+.+.|++|||.|.+..+|.+|+++|+  -|+.|.+|||.|.+.=-|.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhh
Confidence            45679999999999999999999999964   567999999999999999999999997  6899999999999999999


Q ss_pred             hhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        555 GHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       555 ~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      .|+|+ |+||+     ||.|+.|+++|.++++|+.||++|.+.|+|+|..|++.|...+.|.+|...
T Consensus       205 GHiRT-HTGEK-----PF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  205 GHIRT-HTGEK-----PFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccc-ccCCC-----CccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999 88885     999999999999999999999999999999999999999999999999864

>KOG3623|consensus

Probab=99.90  E-value=3.6e-24  Score=216.00  Aligned_cols=81  Identities=32%  Similarity=0.652  Sum_probs=68.6

Q ss_pred             cCCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhh
Q psy16830        478 LNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHD  557 (712)
Q Consensus       478 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~  557 (712)
                      .+.+|.|+.|++.|...++|.+|...|+|.+||+|.+|.|.|..+..|..|+|.|+|++||+|+.|+|.|........||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            35678888888888888888888888888888888888888888888888888888888888888888888888888887


Q ss_pred             h
Q psy16830        558 R  558 (712)
Q Consensus       558 ~  558 (712)
                      .
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            5

>KOG3623|consensus

Probab=99.89  E-value=2.4e-23  Score=210.10  Aligned_cols=78  Identities=29%  Similarity=0.739  Sum_probs=73.5

Q ss_pred             cccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhh
Q psy16830        537 PFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLR  616 (712)
Q Consensus       537 p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~  616 (712)
                      +|.|+.|+|.|...+.|.+|... |+|.+     ||+|.+|.|+|..+..|..|+|.|.|||||+|..|++.|...+.+.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYE-HsGqR-----PyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYS  967 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYE-HSGQR-----PYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYS  967 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhh-hcCCC-----CcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchH
Confidence            59999999999999999999886 88875     9999999999999999999999999999999999999999999999


Q ss_pred             hHHh
Q psy16830        617 SHIK  620 (712)
Q Consensus       617 ~H~~  620 (712)
                      .||.
T Consensus       968 QHMN  971 (1007)
T KOG3623|consen  968 QHMN  971 (1007)
T ss_pred             hhhc
Confidence            9986

>KOG3576|consensus

Probab=99.69  E-value=4.5e-18  Score=145.53  Aligned_cols=123  Identities=27%  Similarity=0.565  Sum_probs=98.7

Q ss_pred             CCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhh
Q psy16830        479 NKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDR  558 (712)
Q Consensus       479 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~  558 (712)
                      ...|.|.+|++.|.-...|.+|++.|...+.|.|..||+.|.....|++|+++|+|.+||+|..|++.|+.+-.|..|.+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhcc
Q psy16830        559 VVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       559 ~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      .+|+......                  ..     -..++.|.|..||+.-.....+..|++.+|.
T Consensus       195 kvhgv~~~ya------------------yk-----err~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  195 KVHGVQHQYA------------------YK-----ERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHcCchHHHH------------------HH-----HhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            9887532110                  00     0123556666666666666666666665553

>KOG3576|consensus

Probab=99.66  E-value=1.8e-17  Score=141.79  Aligned_cols=119  Identities=25%  Similarity=0.497  Sum_probs=100.9

Q ss_pred             CCCCccCccChhccCCHHHHHHhHhhcC-CCCCcCcchhHhhcCHHHHHHHHhhcCCCCCccccccccccCChhhhhccc
Q psy16830         94 LNKPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHD  172 (712)
Q Consensus        94 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  172 (712)
                      ....|.|.+|++.|.....|.+|++-|. .+.|-|..||+.|....+|++|+++|+|.+||+|..|++.|...-.|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            3567999999999999999999999995 467889999999999999999999999999999999999999999999999


Q ss_pred             cccccCcc-----cccccceecCCcccccCChHHHHHHHHHhcCC
Q psy16830        173 RIVHQGKK-----YNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQ  212 (712)
Q Consensus       173 ~~~h~~~~-----~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  212 (712)
                      +.+|+...     ....+.|.|..||.+-.....+..|++.|+..
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            98887432     22335678888888887777788888777643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.17  E-value=3.5e-11  Score=124.97  Aligned_cols=143  Identities=18%  Similarity=0.467  Sum_probs=103.6

Q ss_pred             CCCcchhhhhcchhhHhhccccccCCCccccCC--CCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        482 FKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       482 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ..|+.|...... ..|..|.... ....-.|+.  ||..|. +..|..|         +.|+.|++.|. ...|..|+..
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYC-SRHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhC-CCcceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHHh
Confidence            468888876654 4455776433 334456874  998883 3444444         58999999985 6789999988


Q ss_pred             cccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCC----------chhhhhHHhhhccCCCCC
Q psy16830        560 VHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYAT----------IGGLRSHIKIVHHGLKTQ  629 (712)
Q Consensus       560 ~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~----------~~~L~~H~~~~H~~~~~~  629 (712)
                      +|        ++|.|+ ||+.+ ....|..|+.+|.+++|+.|.+|++.|..          ...|..|...        
T Consensus       475 ~H--------kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~--------  536 (567)
T PLN03086        475 FH--------EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI--------  536 (567)
T ss_pred             cC--------CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh--------
Confidence            65        278999 99755 66899999999999999999999998842          2367777543        


Q ss_pred             ccccCCCCCCccchhhccccccccccccccCCCccccchhccCCCccCChhhhhhhChHHHHhHHhh
Q psy16830        630 QSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       630 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                                                              .|.+++.|..||+.+.. .+|..|+-.
T Consensus       537 ----------------------------------------CG~rt~~C~~Cgk~Vrl-rdm~~H~~~  562 (567)
T PLN03086        537 ----------------------------------------CGSRTAPCDSCGRSVML-KEMDIHQIA  562 (567)
T ss_pred             ----------------------------------------cCCcceEccccCCeeee-hhHHHHHHH
Confidence                                                    35788999999987754 467777643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.11  E-value=8.1e-11  Score=122.33  Aligned_cols=120  Identities=22%  Similarity=0.517  Sum_probs=97.7

Q ss_pred             CCCcc--hhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        482 FKCDD--CDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       482 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ..|+.  ||..|. +..+..|         +.|+.|++.|. ...|..|+.+|+  +|+.|+ |++.+ .+..|..|+..
T Consensus       434 V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~t  498 (567)
T PLN03086        434 VVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAS  498 (567)
T ss_pred             eeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhc
Confidence            35874  999884 4444555         47999999996 688999999985  899999 99765 67899999876


Q ss_pred             cccCccccccCCcccCcCCcccC----------CchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhcc
Q psy16830        560 VHQGKKLIVYKSYKCSLCPKAFT----------YLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       560 ~h~~~~~~~~~~~~C~~C~~~f~----------~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                       |.++     +++.|++|++.|.          ..+.|..|..++ |.+++.|..||+.+.. .+|..|+..+|.
T Consensus       499 -hCp~-----Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        499 -TCPL-----RLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             -cCCC-----CceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence             5555     3899999999995          245899999986 8999999999998876 679999988884

>PHA00733 hypothetical protein

Probab=99.00  E-value=3.6e-10  Score=95.28  Aligned_cols=83  Identities=17%  Similarity=0.301  Sum_probs=56.6

Q ss_pred             CCcccCcccccccCChhhHHhh--hhh--cccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccC
Q psy16830        535 ARPFSCPVCKKQFKRKQDVAGH--DRV--VHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYA  610 (712)
Q Consensus       535 ~~p~~C~~C~~~f~~~~~l~~H--~~~--~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~  610 (712)
                      .+++.|.+|.+.|.....|..|  ++.  .+.+.     +||.|+.|++.|.+...|..|++.|  +.+|.|.+|++.|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~-----kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~  110 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAV-----SPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFR  110 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCC-----CCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccC
Confidence            3455555555555555544444  111  11112     4788888888888888888888876  35788888888888


Q ss_pred             CchhhhhHHhhhcc
Q psy16830        611 TIGGLRSHIKIVHH  624 (712)
Q Consensus       611 ~~~~L~~H~~~~H~  624 (712)
                      ....|.+|+...|.
T Consensus       111 ~~~sL~~H~~~~h~  124 (128)
T PHA00733        111 NTDSTLDHVCKKHN  124 (128)
T ss_pred             CHHHHHHHHHHhcC
Confidence            88888888888663

>PHA00733 hypothetical protein

Probab=98.91  E-value=1.6e-09  Score=91.42  Aligned_cols=53  Identities=26%  Similarity=0.595  Sum_probs=33.8

Q ss_pred             cceecCCcccccCChHHHHHHHHHhcCCCCcCCccccccCCChhHHHHHHHHhcc
Q psy16830        185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHE  239 (712)
Q Consensus       185 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  239 (712)
                      ++|.|+.|++.|.+...|..|++.|  +.+|.|+.|++.|.....|..|+...|.
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3566666666666666666666654  3456666666666666666666666553

>PHA02768 hypothetical protein; Provisional

Probab=98.88  E-value=8.3e-10  Score=74.98  Aligned_cols=44  Identities=16%  Similarity=0.328  Sum_probs=40.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLR  616 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~  616 (712)
                      .|+|+.||+.|...+.|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999999  7999999999999888775

>KOG3993|consensus

Probab=98.88  E-value=4.7e-10  Score=108.06  Aligned_cols=147  Identities=20%  Similarity=0.337  Sum_probs=113.8

Q ss_pred             CCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCC--------C----------------
Q psy16830        480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHST--------A----------------  535 (712)
Q Consensus       480 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--------~----------------  535 (712)
                      ..|.|..|...|.+...|.+|.-...-.--|.|+.|+|.|+...+|..|.|.|..        .                
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            4589999999999999999997544444569999999999999999999999931        1                


Q ss_pred             ---------CcccCcccccccCChhhHHhhhhhcccCccccc--------------------------------------
Q psy16830        536 ---------RPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIV--------------------------------------  568 (712)
Q Consensus       536 ---------~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~--------------------------------------  568 (712)
                               .-|.|.+|++.|.+...|+.|..++|.......                                      
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence                     138899999999999999999887664332110                                      


Q ss_pred             --cCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        569 --YKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       569 --~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                        ...-.|++|+-.+.++..---+.+.-.-+..|.|.+|...|.+..+|.+|+...|..+
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence              0112466677666666555555554445677999999999999999999999988654

>PHA02768 hypothetical protein; Provisional

Probab=98.75  E-value=4e-09  Score=71.66  Aligned_cols=42  Identities=19%  Similarity=0.545  Sum_probs=28.1

Q ss_pred             cccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhH
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDV  553 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l  553 (712)
                      |.|+.||+.|...++|..|+++|+  +||+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            567777777777777777777766  566666677666655544

>KOG3993|consensus

Probab=98.74  E-value=1.2e-09  Score=105.37  Aligned_cols=218  Identities=16%  Similarity=0.188  Sum_probs=108.8

Q ss_pred             cceecCCcccccCChHHHHHHHHHhcCCCCcCCccccccCCChhHHHHHHHHhccCCCCCCcccccccCCc-cccccccc
Q psy16830        185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESK-TCSVDEIN  263 (712)
Q Consensus       185 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~  263 (712)
                      ..|.|..|...|.+.-.|.+|.-.-..--.|+|+.|++.|+.-.+|..|.+.|........   ......+ ........
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~---a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAK---AGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhh---cCCCChhhhhhhhhhh
Confidence            3477777777777777777775322222347778888888777788777776332211100   0000000 00000000


Q ss_pred             cccc-ccccccccCCCcchhhhhccCCCccCCcchhhccCHHHHHHHHHhhccCCCCcccCcCccccCChhHHHHHHHhc
Q psy16830        264 KENE-EGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISH  342 (712)
Q Consensus       264 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  342 (712)
                      ++.+ .++.              ..+..|.|..|++.|.....|+.|+.++|.....-.=   .-.|.....        
T Consensus       343 ~ea~rsg~d--------------ss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~---a~~f~~s~~--------  397 (500)
T KOG3993|consen  343 QEAERSGDD--------------SSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK---APKFLLSRV--------  397 (500)
T ss_pred             hhccccCCc--------------ccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc---ccCcchhhc--------
Confidence            0000 0000              1123577777777777777777776654432211000   000100000        


Q ss_pred             CCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHHHHHhhhcCCCcccCCCCccccCChHHH
Q psy16830        343 STQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGL  422 (712)
Q Consensus       343 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  422 (712)
                       ..-.+-|..|+-.+...+.-..+...+.+..  .-..|++|+-.+.++..-..+.+.-..+..|.|.+|..+|.+...|
T Consensus       398 -~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sa--el~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~l  474 (500)
T KOG3993|consen  398 -IPLMHFNQAVATHSSASDSHGDEVLYVAGSA--ELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGL  474 (500)
T ss_pred             -ccccccccccccccccccccccceeeeeccc--cccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcch
Confidence             0011234444444443332222222222211  1245667776666666555555555666778888888888888888


Q ss_pred             HhHHHHhhcCC
Q psy16830        423 RSHMKIVHHGL  433 (712)
Q Consensus       423 ~~H~~~~H~~~  433 (712)
                      .+|+..-|..+
T Consensus       475 trhin~~Hpse  485 (500)
T KOG3993|consen  475 TRHINKCHPSE  485 (500)
T ss_pred             HhHhhhcChHH
Confidence            88888777654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.66  E-value=1.2e-08  Score=59.21  Aligned_cols=26  Identities=35%  Similarity=0.657  Sum_probs=23.9

Q ss_pred             hHHhHHhhhcCCCcccCCCCccccCC
Q psy16830        586 ALEDHQFVHTGQKTHLCTMCPASYAT  611 (712)
Q Consensus       586 ~L~~H~~~H~~~k~~~C~~C~~~f~~  611 (712)
                      +|..|+++|+|++||.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999974

...

>KOG1146|consensus

Probab=98.65  E-value=1.3e-08  Score=112.65  Aligned_cols=174  Identities=15%  Similarity=0.098  Sum_probs=99.5

Q ss_pred             ccccccccCChhhhhccccccccCcccccccceecCCcccccCChHHHHHHHHH-hc-----------------------
Q psy16830        155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYV-HT-----------------------  210 (712)
Q Consensus       155 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~-----------------------  210 (712)
                      |.-|+..+.....+..|+...+.-.     +.|+|+.|+..|+....|..|||. |.                       
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~-----kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~  513 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFF-----KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYR  513 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeeccc-----ccccCCccchhhhhHHHhhhcccccccccchhHhHhcccccccccccccc
Confidence            4445556666666666666655543     578899999999999999999886 21                       


Q ss_pred             -CCCCcCCccccccCCChhHHHHHHHHhccCCCCCCcccccc--cCCcccccccccccccccccccccCCCcchhhhhcc
Q psy16830        211 -GQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSS--HESKTCSVDEINKENEEGATIRKVKPHEDSKEYMAL  287 (712)
Q Consensus       211 -~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (712)
                       +.++|.|..|...+..+.+|..|++..-.............  .......+....  .++.......-.     .....
T Consensus       514 ~~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~--P~~ag~~~~ags-----~~pkt  586 (1406)
T KOG1146|consen  514 CPGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAV--PEEAGLGPSAGS-----SGPKT  586 (1406)
T ss_pred             CCCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccC--cccccCCCCCCC-----CCCCC
Confidence             23679999999999999999999976321111000000000  000000000000  000000000000     00112


Q ss_pred             CCCccCCcchhhccCHHHHHHHHHhhccCCCCcccCcCccccCChhHHHHHHH
Q psy16830        288 NKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMI  340 (712)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  340 (712)
                      ...+.|.+|++.-.-..+|+.|+...+....+..|-.|+..+.....+..+-+
T Consensus       587 kP~~~C~vc~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~  639 (1406)
T KOG1146|consen  587 KPSWRCEVCSYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGR  639 (1406)
T ss_pred             CCCcchhhhcchhhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCC
Confidence            34689999999999999999999866655555555555555554444444433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.58  E-value=1.6e-08  Score=58.59  Aligned_cols=24  Identities=38%  Similarity=0.847  Sum_probs=22.8

Q ss_pred             HHHhHHhhhcCCCccccccccCCC
Q psy16830        689 LLNKHKLLHFDKDYFSCNYCGKTF  712 (712)
Q Consensus       689 ~L~~H~~~H~~~~~~~C~~C~~~F  712 (712)
                      +|.+||++|+|++||.|++|+++|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCee
Confidence            589999999999999999999987

...

>PHA00616 hypothetical protein

Probab=98.44  E-value=1.2e-07  Score=61.09  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=32.3

Q ss_pred             CccCChhhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        674 PFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      ||+|..||+.|...++|..|++.|+|++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6999999999999999999999999999999874

>PHA00616 hypothetical protein

Probab=98.33  E-value=1.8e-07  Score=60.36  Aligned_cols=39  Identities=15%  Similarity=0.220  Sum_probs=31.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCcccc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASY  609 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f  609 (712)
                      ||+|+.||+.|.+.+.|..|++.|+|++++.|+.=-..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            588999999999999999999999999998887543333

>KOG1146|consensus

Probab=98.22  E-value=9.9e-07  Score=98.21  Aligned_cols=80  Identities=24%  Similarity=0.351  Sum_probs=61.5

Q ss_pred             ccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhh-----------------hcCCCcc
Q psy16830        538 FSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV-----------------HTGQKTH  600 (712)
Q Consensus       538 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-----------------H~~~k~~  600 (712)
                      +.|..|++.|.....+. |+-..|         +|.|..|...|.....|..|.+.                 |...++|
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~~~---------~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~ 1330 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDVTH---------RYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH 1330 (1406)
T ss_pred             chhhhccccccCcccee-ecccch---------hHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc
Confidence            66888888777766666 554432         68899999999888888888743                 2234556


Q ss_pred             cCCCCccccCCchhhhhHHhhhccCCCC
Q psy16830        601 LCTMCPASYATIGGLRSHIKIVHHGLKT  628 (712)
Q Consensus       601 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~  628 (712)
                       |.+|...|.....|..||++.|+..++
T Consensus      1331 -c~~c~~~~~~~~alqihm~~~~~~~kt 1357 (1406)
T KOG1146|consen 1331 -CLACEVLLSGREALQIHMRSSAHRRKT 1357 (1406)
T ss_pred             -chHHHhhcchhHHHHHHHHHhhhcccC
Confidence             999999999999999999998876554

>PHA00732 hypothetical protein

Probab=98.11  E-value=1.8e-06  Score=65.42  Aligned_cols=45  Identities=33%  Similarity=0.569  Sum_probs=32.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhh-hcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFV-HTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      ||.|..|++.|.+...|..|++. |+   ++.|+.|++.|.   .|..|+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46777788888777778888773 54   356888888776   57777644

>PHA00732 hypothetical protein

Probab=98.03  E-value=3.5e-06  Score=63.93  Aligned_cols=45  Identities=31%  Similarity=0.689  Sum_probs=29.6

Q ss_pred             ccccCCCCcccCChHHHhhhhhh-cCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHIVI-HSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ||.|+.||+.|.+..+|..|++. |.   ++.|+.|++.|.   .|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46677777777777777777763 43   346777777775   46666654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.90  E-value=1.3e-05  Score=56.39  Aligned_cols=49  Identities=24%  Similarity=0.544  Sum_probs=25.3

Q ss_pred             cccCcCCcccCCchhHHhHHh-hhcCC-CcccCCCCccccCCchhhhhHHhhhc
Q psy16830        572 YKCSLCPKAFTYLGALEDHQF-VHTGQ-KTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~-~H~~~-k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      |.|++|++. .+...|..|.. .|.++ +.+.|++|...+.  .+|.+|+...|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            556666663 33455555644 33332 3456666665433  36666666544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.79  E-value=1.6e-05  Score=56.03  Aligned_cols=49  Identities=31%  Similarity=0.623  Sum_probs=24.6

Q ss_pred             eecCCcccccCChHHHHHHHH-HhcCC-CCcCCccccccCCChhHHHHHHHHhc
Q psy16830        187 YKCSLCPKAFTHLAALEDHQY-VHTGQ-KSHMCNLCSARFTCKGALLGHIKVLH  238 (712)
Q Consensus       187 ~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~~h  238 (712)
                      |.|++|++ ..+...|..|.. .|..+ +.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55555555 333455555544 23322 3455666655433  25666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=8.9e-06  Score=45.90  Aligned_cols=23  Identities=35%  Similarity=0.677  Sum_probs=21.8

Q ss_pred             ccCChhhhhhhChHHHHhHHhhh
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLH  697 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H  697 (712)
                      |.|++|++.|.+++.|..|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.60  E-value=5.3e-05  Score=42.67  Aligned_cols=23  Identities=39%  Similarity=0.855  Sum_probs=16.2

Q ss_pred             eecCCcccccCChHHHHHHHHHh
Q psy16830        187 YKCSLCPKAFTHLAALEDHQYVH  209 (712)
Q Consensus       187 ~~C~~C~k~f~~~~~L~~H~~~H  209 (712)
                      |+|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.55  E-value=3.7e-05  Score=71.90  Aligned_cols=72  Identities=26%  Similarity=0.528  Sum_probs=51.3

Q ss_pred             CCCcccCCC--CccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccccCCCccccchhccCC
Q psy16830        596 GQKTHLCTM--CPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNK  673 (712)
Q Consensus       596 ~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  673 (712)
                      ++|||+|++  |.+.|.+...|+-|+.--|...+...                      ..      .......+...+|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~----------------------~p------~p~~~~~F~~~~K  397 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHE----------------------NP------SPEKMNIFSAKDK  397 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCC----------------------CC------CccccccccccCC
Confidence            359999987  99999999999999876554322110                      00      0001112245689


Q ss_pred             CccCChhhhhhhChHHHHhHHh
Q psy16830        674 PFKCDDCDQRFLTKILLNKHKL  695 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H~~  695 (712)
                      ||.|++|+|++.+...|+-|..
T Consensus       398 PYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         398 PYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceeccccchhhccCccceeccc
Confidence            9999999999999999998863

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.31  E-value=0.00012  Score=41.66  Aligned_cols=24  Identities=29%  Similarity=0.710  Sum_probs=12.8

Q ss_pred             ccCCCCccccCCchhhhhHHhhhc
Q psy16830        600 HLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       600 ~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      |.|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666665533

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.26  E-value=0.00013  Score=59.79  Aligned_cols=75  Identities=19%  Similarity=0.346  Sum_probs=20.9

Q ss_pred             cCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhH
Q psy16830        539 SCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSH  618 (712)
Q Consensus       539 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H  618 (712)
                      +|..|+..|.+...|..|+...|....         + ....+.....+..+.+.-. ...+.|.+|++.|.+...|..|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---------~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---------P-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccc---------c-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHH
Confidence            367777777777777777776665321         1 1122224444444444322 2368899999999888889999


Q ss_pred             Hhhhcc
Q psy16830        619 IKIVHH  624 (712)
Q Consensus       619 ~~~~H~  624 (712)
                      |+..++
T Consensus        70 m~~~~H   75 (100)
T PF12756_consen   70 MRSKHH   75 (100)
T ss_dssp             HHHTTT
T ss_pred             HcCccC
Confidence            887543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.24  E-value=0.00011  Score=68.84  Aligned_cols=25  Identities=32%  Similarity=0.683  Sum_probs=16.7

Q ss_pred             CCCcccCCCCccccCCchhhhhHHh
Q psy16830        596 GQKTHLCTMCPASYATIGGLRSHIK  620 (712)
Q Consensus       596 ~~k~~~C~~C~~~f~~~~~L~~H~~  620 (712)
                      ..|||+|++|++.|.+...|+-|..
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCCceeccccchhhccCccceeccc
Confidence            3567777777777777777766643

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.19  E-value=0.00033  Score=39.84  Aligned_cols=23  Identities=30%  Similarity=0.805  Sum_probs=13.9

Q ss_pred             eecCCcccccCChHHHHHHHHHh
Q psy16830        187 YKCSLCPKAFTHLAALEDHQYVH  209 (712)
Q Consensus       187 ~~C~~C~k~f~~~~~L~~H~~~H  209 (712)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.17  E-value=0.00011  Score=43.23  Aligned_cols=26  Identities=38%  Similarity=0.833  Sum_probs=24.0

Q ss_pred             CccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        674 PFKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      ||.|..|++.|.+..+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998853

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.05  E-value=0.00039  Score=40.90  Aligned_cols=25  Identities=36%  Similarity=0.836  Sum_probs=17.8

Q ss_pred             ceecCCcccccCChHHHHHHHHHhc
Q psy16830        186 SYKCSLCPKAFTHLAALEDHQYVHT  210 (712)
Q Consensus       186 ~~~C~~C~k~f~~~~~L~~H~~~H~  210 (712)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777776664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.96  E-value=0.00049  Score=56.39  Aligned_cols=24  Identities=29%  Similarity=0.719  Sum_probs=13.3

Q ss_pred             ceecCCChhhccChHHHHHHHhhh
Q psy16830        378 SYKCSLCPRVFTHLAALEDHQFVH  401 (712)
Q Consensus       378 ~~~C~~C~~~f~~~~~l~~H~~~h  401 (712)
                      .+.|.+|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            355666666666666666665543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.81  E-value=0.00084  Score=38.96  Aligned_cols=25  Identities=28%  Similarity=0.705  Sum_probs=22.9

Q ss_pred             ccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      |.|..|++.|.+.+.|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998853

>KOG2231|consensus

Probab=96.74  E-value=0.0014  Score=70.11  Aligned_cols=20  Identities=10%  Similarity=0.047  Sum_probs=11.1

Q ss_pred             CCCCCCcchhhhhcchhhHh
Q psy16830        479 NKPFKCDDCDQRFLTKILLN  498 (712)
Q Consensus       479 ~~~~~C~~C~~~f~~~~~L~  498 (712)
                      ..+|.+..++..+....++.
T Consensus       403 ~~~~~~~~~~~~~~~~~s~~  422 (669)
T KOG2231|consen  403 AAPYPAPNRGPGENSIKSLR  422 (669)
T ss_pred             ccCccccccCcccccccccc
Confidence            34566666666555555443

>KOG2231|consensus

Probab=96.56  E-value=0.0054  Score=65.69  Aligned_cols=62  Identities=27%  Similarity=0.683  Sum_probs=38.2

Q ss_pred             ccccccccccCChhhhhccccccccCcccccccceecCCcccccCChHHHHHHHH-HhcCCCCcCCccccc---------
Q psy16830        153 FSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY-VHTGQKSHMCNLCSA---------  222 (712)
Q Consensus       153 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~---------  222 (712)
                      +.|.+|++.|.-         . -        ..-.|..| -.|.+...|+.|+. .|.   .+.|.+|-.         
T Consensus       100 ~~C~~C~~~~~~---------~-~--------~~~~~~~c-~~~~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~  157 (669)
T KOG2231|consen  100 HSCHICDRRFRA---------L-Y--------NKKECLHC-TEFKSVENLKNHMRDQHK---LHLCSLCLQNLKIFINER  157 (669)
T ss_pred             hhcCccccchhh---------h-c--------ccCCCccc-cchhHHHHHHHHHHHhhh---hhccccccccceeeeeee
Confidence            678888887631         0 0        12358888 78888888999985 553   356666643         


Q ss_pred             cCCChhHHHHHHHH
Q psy16830        223 RFTCKGALLGHIKV  236 (712)
Q Consensus       223 ~f~~~~~L~~H~~~  236 (712)
                      ..-+...|..|++.
T Consensus       158 k~Yt~~el~~h~~~  171 (669)
T KOG2231|consen  158 KLYTRAELNLHLMF  171 (669)
T ss_pred             ehehHHHHHHHHhc
Confidence            22244556666543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.34  E-value=0.0027  Score=36.74  Aligned_cols=22  Identities=36%  Similarity=0.706  Sum_probs=10.8

Q ss_pred             ccCcCCcccCCchhHHhHHhhh
Q psy16830        573 KCSLCPKAFTYLGALEDHQFVH  594 (712)
Q Consensus       573 ~C~~C~~~f~~~~~L~~H~~~H  594 (712)
                      +|..|++.|.+...|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4445555555555555554444

>PRK04860 hypothetical protein; Provisional

Probab=96.26  E-value=0.0022  Score=56.41  Aligned_cols=40  Identities=23%  Similarity=0.502  Sum_probs=35.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGG  614 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~  614 (712)
                      +|.|. |+.   ....+.+|.++|+|+++|.|..|+..|.....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            69998 997   77889999999999999999999999876544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.23  E-value=0.0026  Score=36.09  Aligned_cols=23  Identities=30%  Similarity=0.521  Sum_probs=13.5

Q ss_pred             ccCCCCccccCCchhhhhHHhhhc
Q psy16830        600 HLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       600 ~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      |+|+.|++... ..+|.+|++++|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56666666666 666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.15  E-value=0.0039  Score=41.32  Aligned_cols=31  Identities=26%  Similarity=0.523  Sum_probs=12.7

Q ss_pred             CCCCcccCcCccccCChhHHHHHHHhcCCCC
Q psy16830        316 NKGGFTCNSCGLIFSEKKYLRNHMISHSTQK  346 (712)
Q Consensus       316 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  346 (712)
                      .+.|-.|++|+..++...+|++|+..+++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3344455555555555555555554444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.13  E-value=0.0047  Score=40.98  Aligned_cols=32  Identities=28%  Similarity=0.602  Sum_probs=17.8

Q ss_pred             CCCccccCCCCcccCChHHHhhhhhhcCCCCc
Q psy16830        506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP  537 (712)
Q Consensus       506 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p  537 (712)
                      ...|-.|++|+..+.+..+|++|+.++++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34566777777777777777777766666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.08  E-value=0.009  Score=57.06  Aligned_cols=133  Identities=27%  Similarity=0.476  Sum_probs=93.2

Q ss_pred             CccCcc--ChhccCCHHHHHHhHhhcCCCCCcCcchh---Hhhc------CHHHHHHHHhhcCCCCCc----cccccccc
Q psy16830         97 PFKCDD--CDQCFLTKILLNKHKLLHTEGHLTCNLCG---QTFR------QKFRLLNHMISHSTEKPF----SCPICKKQ  161 (712)
Q Consensus        97 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~~~----~C~~C~~~  161 (712)
                      .|.|+.  |..+......|..|.+..+.. +.|.+|-   +.|.      ++..|+.|...-..+.-|    .|..|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~-~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF-VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc-EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            488865  888888888999998764432 5577773   2343      345677776532222122    59999999


Q ss_pred             cCChhhhhccccccccCcccccccceecCCcccc-------cCChHHHHHHHHHhcCCCCcCCcc--cc----ccCCChh
Q psy16830        162 FKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKA-------FTHLAALEDHQYVHTGQKSHMCNL--CS----ARFTCKG  228 (712)
Q Consensus       162 f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~--C~----~~f~~~~  228 (712)
                      |-.-.+|..|+|..|.          +|.+|+++       |.+-..|..|.+.-    -|.|.+  |-    ..|....
T Consensus       230 FYdDDEL~~HcR~~HE----------~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         230 FYDDDELRRHCRLRHE----------ACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             ecChHHHHHHHHhhhh----------hhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccHH
Confidence            9999999999998664          37777654       77888899988732    266644  43    3589999


Q ss_pred             HHHHHHHHhccCCCCC
Q psy16830        229 ALLGHIKVLHEGYKRP  244 (712)
Q Consensus       229 ~L~~H~~~~h~~~~~~  244 (712)
                      .|..|+...|......
T Consensus       296 el~~h~~~~h~~~~~~  311 (493)
T COG5236         296 ELLEHLTRFHKVNARL  311 (493)
T ss_pred             HHHHHHHHHhhccccc
Confidence            9999999888665443

>PRK04860 hypothetical protein; Provisional

Probab=96.05  E-value=0.0026  Score=55.93  Aligned_cols=36  Identities=22%  Similarity=0.791  Sum_probs=33.1

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCCccccccccCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF  712 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F  712 (712)
                      -+|.|. |+.   ....+.+|.++|.++++|.|..|+..|
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            379998 998   889999999999999999999999875

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.97  E-value=0.0066  Score=34.37  Aligned_cols=23  Identities=30%  Similarity=0.592  Sum_probs=13.3

Q ss_pred             eecCCcccccCChHHHHHHHHHhc
Q psy16830        187 YKCSLCPKAFTHLAALEDHQYVHT  210 (712)
Q Consensus       187 ~~C~~C~k~f~~~~~L~~H~~~H~  210 (712)
                      |+|+.|++... ...|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56666666666 666666666553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.96  E-value=0.0052  Score=35.21  Aligned_cols=23  Identities=26%  Similarity=0.674  Sum_probs=17.5

Q ss_pred             eecCCcccccCChHHHHHHHHHh
Q psy16830        187 YKCSLCPKAFTHLAALEDHQYVH  209 (712)
Q Consensus       187 ~~C~~C~k~f~~~~~L~~H~~~H  209 (712)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888887654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.91  E-value=0.028  Score=60.70  Aligned_cols=139  Identities=19%  Similarity=0.281  Sum_probs=75.7

Q ss_pred             CcccCcCCcccCCchhHHhHHh--hhcCC--CcccCC--CCccccCCchhhhhHHhhhccCCCCCcc----ccCCCCCCc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQF--VHTGQ--KTHLCT--MCPASYATIGGLRSHIKIVHHGLKTQQS----CQSSHESKT  640 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~--~H~~~--k~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~----c~~~~~~~~  640 (712)
                      ++.|..|...|.....|..|.+  .|+++  +|+.|+  .|++.|.....+..|... |.+..+...    +...+....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL-HTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccc-ccCCCccccccccCcccccccc
Confidence            5667777777777777777777  67777  777777  577777777777777665 554443322    111110000


Q ss_pred             c-----chhhc---cc----cccccccc---cccCCCccccchh--ccCCCccCChhhhhhhChHHHHhHHhhhcCCCcc
Q psy16830        641 C-----SVDEI---NK----ENEEGATI---RKVKPHEDSKEYM--ALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYF  703 (712)
Q Consensus       641 ~-----~~~~~---~~----~~~~~~~~---~~~~~~~~~~~~~--~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  703 (712)
                      -     .....   ..    .......+   ............+  .....+.+..|.+.|.....|..|++.|....++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence            0     00000   00    00000000   0000000001111  1223578899999999999999999999888887


Q ss_pred             ccccccC
Q psy16830        704 SCNYCGK  710 (712)
Q Consensus       704 ~C~~C~~  710 (712)
                      .|..+..
T Consensus       448 ~~~~~~~  454 (467)
T COG5048         448 LCSILKS  454 (467)
T ss_pred             eeccccc
Confidence            7766543

>KOG2785|consensus

Probab=95.74  E-value=0.031  Score=54.92  Aligned_cols=75  Identities=20%  Similarity=0.110  Sum_probs=39.8

Q ss_pred             CCccCCcchhhccCHHHHHHHHHhhccCCCCcccCcCccccCChhHHHHHHHhcCCCCCccCCccc---ccccChHHHHH
Q psy16830        289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCG---KRFKRENGVIN  365 (712)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~~~~~l~~  365 (712)
                      .|-.|-.|++.+.+...-..||...|.---|    .= .-..+...|..=+..-- ..-+.|-.|+   +.|.+....+.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIP----dr-eYL~D~~GLl~YLgeKV-~~~~~CL~CN~~~~~f~sleavr~  238 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIP----DR-EYLTDEKGLLKYLGEKV-GIGFICLFCNELGRPFSSLEAVRA  238 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCC----ch-HhhhchhHHHHHHHHHh-ccCceEEEeccccCcccccHHHHH
Confidence            3466777777777777777777665521100    00 00111222222211111 1236677777   88888888888


Q ss_pred             HHHH
Q psy16830        366 HQRL  369 (712)
Q Consensus       366 H~~~  369 (712)
                      ||..
T Consensus       239 HM~~  242 (390)
T KOG2785|consen  239 HMRD  242 (390)
T ss_pred             HHhh
Confidence            8864

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.69  E-value=0.0033  Score=36.08  Aligned_cols=23  Identities=30%  Similarity=0.595  Sum_probs=21.3

Q ss_pred             ccCChhhhhhhChHHHHhHHhhh
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLH  697 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H  697 (712)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999865

>KOG2482|consensus

Probab=95.53  E-value=0.027  Score=53.95  Aligned_cols=178  Identities=22%  Similarity=0.256  Sum_probs=94.4

Q ss_pred             cceecCCccccc-CChHHHHHHHH-HhcC---------------------CCCcCCccccccCCChhHHHHHHHHh-ccC
Q psy16830        185 KSYKCSLCPKAF-THLAALEDHQY-VHTG---------------------QKSHMCNLCSARFTCKGALLGHIKVL-HEG  240 (712)
Q Consensus       185 ~~~~C~~C~k~f-~~~~~L~~H~~-~H~~---------------------~~~~~C~~C~~~f~~~~~L~~H~~~~-h~~  240 (712)
                      ...+|-+|+..+ -+++....|+. .|.-                     -..++|-.|.+.|..+..|+.||+.. |..
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            356899998888 46677777875 4421                     12478999999999999999999864 222


Q ss_pred             CCCCCccccc--------ccCCcccccc----ccc-ccccccccccccCCCcchhhhhccCCCccCCcchhhccCHHHHH
Q psy16830        241 YKRPQESCQS--------SHESKTCSVD----EIN-KENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLN  307 (712)
Q Consensus       241 ~~~~~~~~~~--------~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~  307 (712)
                      ..+....-+.        ...+......    ++. ..++.....      .+..+..+......|-.|.....+...|.
T Consensus       223 inPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~w------sDw~ed~a~a~~v~CLfC~~~~en~~~l~  296 (423)
T KOG2482|consen  223 INPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTW------SDWNEDDAEALSVVCLFCTNFYENPVFLF  296 (423)
T ss_pred             cCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccch------hhhhcCCCCccceEEEeeccchhhHHHHH
Confidence            2111110000        0000000000    000 000000000      00011111112268999999999999999


Q ss_pred             HHHHhhccCCCCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHh
Q psy16830        308 QHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH  370 (712)
Q Consensus       308 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  370 (712)
                      .||+.+|.-+-.-.=..=+..|-.+-.+..-+|.  ......|-.|.-.|.....|..|+..+
T Consensus       297 eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRk--q~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  297 EHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRK--QKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHHHHHhhHHhhccccccchhhhhhHHHHHHH--HhhccccccccccccCcchhhhhcccc
Confidence            9999888432100000011222223233332222  123456788888999999999998654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.18  E-value=0.012  Score=56.17  Aligned_cols=73  Identities=21%  Similarity=0.431  Sum_probs=41.8

Q ss_pred             cCCcchhhccCHHHHHHHHHhhccCCCCcccCcCcc-------ccCChhHHHHHHHhcCCCCCccCCc--cc----cccc
Q psy16830        292 KCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGL-------IFSEKKYLRNHMISHSTQKPFSCSL--CG----KRFK  358 (712)
Q Consensus       292 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~  358 (712)
                      .|..|+..|-+...|.+|++..|.     .|.+|++       -|.+...|..|.+.-    -|.|..  |.    ..|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~  292 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFP  292 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEec
Confidence            466666666666666666665442     3444443       345556666665532    244432  22    3577


Q ss_pred             ChHHHHHHHHHhcCC
Q psy16830        359 RENGVINHQRLHQTK  373 (712)
Q Consensus       359 ~~~~l~~H~~~h~~~  373 (712)
                      ....|..|+..-|+.
T Consensus       293 ~~~el~~h~~~~h~~  307 (493)
T COG5236         293 YHTELLEHLTRFHKV  307 (493)
T ss_pred             cHHHHHHHHHHHhhc
Confidence            777788887766654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.07  E-value=0.0059  Score=35.75  Aligned_cols=23  Identities=35%  Similarity=0.684  Sum_probs=21.2

Q ss_pred             ccCChhhhhhhChHHHHhHHhhh
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLH  697 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H  697 (712)
                      |.|..|++.|.+..+|..|++..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999999763

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.06  E-value=0.015  Score=62.76  Aligned_cols=147  Identities=24%  Similarity=0.355  Sum_probs=108.1

Q ss_pred             CCCCCcchhhhhcchhhHhhccc--cccCC--CccccC--CCCcccCChHHHhhhhhhcCCCCcccCcc--cccccCChh
Q psy16830        480 KPFKCDDCDQRFLTKILLNKHKL--LHFDK--DYFSCN--YCGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKRKQ  551 (712)
Q Consensus       480 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~~--C~~~f~~~~  551 (712)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|..+|.+..++.+..  +...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            47899999999999999999999  89999  999999  89999999999999999999998888755  444444333


Q ss_pred             hHHhhhhhcccCccccccCCcccCc--CCcccCCchhHHhHHhhhcCCC--cccCCCCccccCCchhhhhHHhhhccCCC
Q psy16830        552 DVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQK--THLCTMCPASYATIGGLRSHIKIVHHGLK  627 (712)
Q Consensus       552 ~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k--~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  627 (712)
                      .-..+..... .........+.+..  |-..+.....+..|...|...+  .+.+..|.+.|.....|..|++. |....
T Consensus       368 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  445 (467)
T COG5048         368 NNEPPQSLQQ-YKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKI-HTNHA  445 (467)
T ss_pred             CCCCccchhh-ccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccc-cccCC
Confidence            3211111111 00111112344433  7778888888888888888777  45667899999999999999877 54443


Q ss_pred             C
Q psy16830        628 T  628 (712)
Q Consensus       628 ~  628 (712)
                      +
T Consensus       446 ~  446 (467)
T COG5048         446 P  446 (467)
T ss_pred             c
Confidence            3

>KOG2785|consensus

Probab=94.70  E-value=0.038  Score=54.36  Aligned_cols=82  Identities=24%  Similarity=0.406  Sum_probs=41.4

Q ss_pred             CcccCcCccccCChhHHHHHHHh--cCC---CCCcc-CCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChH
Q psy16830        319 GFTCNSCGLIFSEKKYLRNHMIS--HST---QKPFS-CSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLA  392 (712)
Q Consensus       319 ~~~C~~C~~~f~~~~~l~~H~~~--h~~---~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~  392 (712)
                      .|.|..|...|.+...-+.|+++  |.-   .+.+. =++--..|..+..-..-...-..+....++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            58899999999998888888874  310   00000 0111111221111111000000111123677777777777777


Q ss_pred             HHHHHHhh
Q psy16830        393 ALEDHQFV  400 (712)
Q Consensus       393 ~l~~H~~~  400 (712)
                      ....|+..
T Consensus        83 a~~~hl~S   90 (390)
T KOG2785|consen   83 AHENHLKS   90 (390)
T ss_pred             hHHHHHHH
Confidence            77777653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.67  E-value=0.022  Score=33.32  Aligned_cols=21  Identities=33%  Similarity=0.801  Sum_probs=13.1

Q ss_pred             cccCCCCcccCChHHHhhhhh
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIV  530 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~  530 (712)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG4173|consensus

Probab=94.40  E-value=0.013  Score=51.67  Aligned_cols=81  Identities=28%  Similarity=0.572  Sum_probs=63.9

Q ss_pred             CcccCcc--cccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhh-h---------cCCCcccCC
Q psy16830        536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV-H---------TGQKTHLCT  603 (712)
Q Consensus       536 ~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-H---------~~~k~~~C~  603 (712)
                      +.|.|++  |...|.+......|....|++         .|.+|.+.|.+..-|..|+.. |         .|...|+|-
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~Cl  148 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCL  148 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHH
Confidence            4577876  777888888888888777765         488888888888888888642 2         467789995


Q ss_pred             C--CccccCCchhhhhHHhhhccC
Q psy16830        604 M--CPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       604 ~--C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      +  |+..|.+...-..|+-+.|.-
T Consensus       149 vEgCt~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  149 VEGCTEKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             HHhhhhhhhhhhhhhhHHHHhccC
Confidence            4  999999999999999988853

>KOG2482|consensus

Probab=92.68  E-value=0.32  Score=46.98  Aligned_cols=138  Identities=23%  Similarity=0.320  Sum_probs=83.2

Q ss_pred             CCccCCcchhhcc-CHHHHHHHHHhhcc-CC--------------------CCcccCcCccccCChhHHHHHHHh--cCC
Q psy16830        289 KPFKCDDCFQCFL-SKILLNQHKKQMHF-NK--------------------GGFTCNSCGLIFSEKKYLRNHMIS--HST  344 (712)
Q Consensus       289 ~~~~C~~C~~~f~-~~~~l~~H~~~~h~-~~--------------------~~~~C~~C~~~f~~~~~l~~H~~~--h~~  344 (712)
                      ...+|-.|+..+. .++....|+-..|. +-                    ..+.|-.|.+.|+++..|+.||+.  |..
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            3467999987764 56777777655553 11                    236799999999999999999975  322


Q ss_pred             CCCccCCcccccc------cChHHHHHHHHH----h--cCC----------CCCC--ceecCCChhhccChHHHHHHHhh
Q psy16830        345 QKPFSCSLCGKRF------KRENGVINHQRL----H--QTK----------KVYK--SYKCSLCPRVFTHLAALEDHQFV  400 (712)
Q Consensus       345 ~~~~~C~~C~~~f------~~~~~l~~H~~~----h--~~~----------~~~~--~~~C~~C~~~f~~~~~l~~H~~~  400 (712)
                      -.|-.= .-++-|      ..++....|...    -  .++          ....  ...|-.|.....+...|..||..
T Consensus       223 inPknr-eYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~  301 (423)
T KOG2482|consen  223 INPKNR-EYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKI  301 (423)
T ss_pred             cCCCcc-ccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHH
Confidence            222000 000000      011111111111    0  000          0111  25899999988889999999876


Q ss_pred             hcC---------------------------CCcccCCCCccccCChHHHHhHHH
Q psy16830        401 HTG---------------------------QKTRLCTMCPAIFASIGGLRSHMK  427 (712)
Q Consensus       401 h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~  427 (712)
                      -+.                           .....|-.|.-.|.....|..||.
T Consensus       302 vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  302 VHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            432                           122468899999999999999984

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.93  E-value=0.087  Score=30.03  Aligned_cols=21  Identities=29%  Similarity=0.623  Sum_probs=18.4

Q ss_pred             ccCChhhhhhhChHHHHhHHhh
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                      ..|+.||+.| ....|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 88999999864

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.54  E-value=0.086  Score=33.05  Aligned_cols=24  Identities=25%  Similarity=0.427  Sum_probs=21.6

Q ss_pred             CCccCChhhhhhhChHHHHhHHhh
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                      .+|.|++|+..|.+...+..|+..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.17  E-value=0.15  Score=29.04  Aligned_cols=19  Identities=32%  Similarity=0.730  Sum_probs=11.6

Q ss_pred             ccCcCCcccCCchhHHhHHh
Q psy16830        573 KCSLCPKAFTYLGALEDHQF  592 (712)
Q Consensus       573 ~C~~C~~~f~~~~~L~~H~~  592 (712)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4556666654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.89  E-value=0.19  Score=30.95  Aligned_cols=11  Identities=27%  Similarity=0.911  Sum_probs=6.1

Q ss_pred             cccCCCCcccC
Q psy16830        510 FSCNYCGKTFL  520 (712)
Q Consensus       510 ~~C~~C~k~f~  520 (712)
                      |.|..||+.+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45666665543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.11  E-value=0.31  Score=30.42  Aligned_cols=23  Identities=30%  Similarity=0.580  Sum_probs=17.9

Q ss_pred             ceecCCcccccCChHHHHHHHHH
Q psy16830        186 SYKCSLCPKAFTHLAALEDHQYV  208 (712)
Q Consensus       186 ~~~C~~C~k~f~~~~~L~~H~~~  208 (712)
                      +|.|.+|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=88.44  E-value=0.25  Score=43.94  Aligned_cols=78  Identities=26%  Similarity=0.522  Sum_probs=42.3

Q ss_pred             ccCCc--ccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHHHHHhh----------hcCCCcccCC--CCc
Q psy16830        348 FSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFV----------HTGQKTRLCT--MCP  413 (712)
Q Consensus       348 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~--~C~  413 (712)
                      |.|++  |...|........|...-|+.      .|..|.+.|++...|..|+..          ..|...|.|-  .|+
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            44444  444555444444454444432      255555555555555555432          2345556663  477


Q ss_pred             cccCChHHHHhHHHHhhc
Q psy16830        414 AIFASIGGLRSHMKIVHH  431 (712)
Q Consensus       414 ~~f~~~~~l~~H~~~~H~  431 (712)
                      ..|.+....+.|+-..|.
T Consensus       154 ~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhHHHHhcc
Confidence            777777777777766664

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=88.33  E-value=0.31  Score=30.04  Aligned_cols=10  Identities=30%  Similarity=0.873  Sum_probs=5.0

Q ss_pred             CcccCCCCcc
Q psy16830        598 KTHLCTMCPA  607 (712)
Q Consensus       598 k~~~C~~C~~  607 (712)
                      .++.|++|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.16  E-value=0.31  Score=40.34  Aligned_cols=27  Identities=19%  Similarity=0.337  Sum_probs=24.7

Q ss_pred             CCccC----ChhhhhhhChHHHHhHHhhhcC
Q psy16830        673 KPFKC----DDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       673 k~~~C----~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      ..|.|    ..|++.+.+...+.+|++.++|
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            56999    9999999999999999998764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=87.92  E-value=0.13  Score=46.73  Aligned_cols=41  Identities=32%  Similarity=0.484  Sum_probs=27.9

Q ss_pred             CCcchhhccCHHHHHHHHHhhccCCCCcccCcCccccCChhHHHHH
Q psy16830        293 CDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNH  338 (712)
Q Consensus       293 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  338 (712)
                      |-+|++.|..+..|..|++..|     |+|.+|.+...+--.|..|
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceee
Confidence            6677777777777777776644     6777777666666556655

>KOG2893|consensus

Probab=86.09  E-value=0.26  Score=44.79  Aligned_cols=51  Identities=29%  Similarity=0.481  Sum_probs=40.8

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      |+| |=+|++.|.+...|.+|++.    |-|+|.+|.+...+--.|..|-..+|..
T Consensus        10 kpw-cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhhh
Confidence            344 88899999988888888764    5588999999888888888887777753

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=85.56  E-value=0.33  Score=32.89  Aligned_cols=31  Identities=16%  Similarity=0.337  Sum_probs=26.5

Q ss_pred             hhcCCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        593 VHTGQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       593 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      .-.||-.++|+-|++.|+...+..+|+...|
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            3457788899999999999999999998866

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.54  E-value=2.4  Score=34.48  Aligned_cols=24  Identities=25%  Similarity=0.541  Sum_probs=12.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVH  594 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H  594 (712)
                      .|+|+.|...|-..-++..|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            455555555555555555554444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF15269 zf-C2H2_7: Zinc-finger

Probab=80.85  E-value=1.4  Score=28.35  Aligned_cols=22  Identities=27%  Similarity=0.365  Sum_probs=20.4

Q ss_pred             ccCChhhhhhhChHHHHhHHhh
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                      |+|..|.++...++.|-.||+-
T Consensus        21 ykcfqcpftc~~kshl~nhmky   42 (54)
T PF15269_consen   21 YKCFQCPFTCNEKSHLFNHMKY   42 (54)
T ss_pred             ceeecCCcccchHHHHHHHHHH
Confidence            7999999999999999999974

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.20  E-value=1.4  Score=36.36  Aligned_cols=23  Identities=22%  Similarity=0.404  Sum_probs=15.6

Q ss_pred             cceecCCcccccCChHHHHHHHHH
Q psy16830        185 KSYKCSLCPKAFTHLAALEDHQYV  208 (712)
Q Consensus       185 ~~~~C~~C~k~f~~~~~L~~H~~~  208 (712)
                      +...|..|+....- +.+..|++.
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~   32 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRK   32 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHH
Confidence            34667777777655 677777773

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	712
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-21
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-12
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		9e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-10
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		6e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		6e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-06
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		6e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		3e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		3e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		5e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 52/222 (23%)
Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRP 244
           K Y C  C K+F+    L +HQ  HTG+K + C  C   F+ K  L  H +  H G    
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTG---- 74
Query: 245 QESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKI 304
                                                       KP+KC +C + F  + 
Sbjct: 75  -------------------------------------------EKPYKCPECGKSFSQRA 91
Query: 305 LLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVI 364
            L  H++  H  +  + C  CG  FS+  +LR H  +H+ +KP+ C  CGK F RE+ + 
Sbjct: 92  NLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH 150
Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKT 406
            HQR H  +K    YKC  C + F+   AL  HQ  HTG+KT
Sbjct: 151 THQRTHTGEKP---YKCPECGKSFSRRDALNVHQRTHTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 89/223 (39%), Gaps = 53/223 (23%)
Query: 377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQ 436
           K Y C  C + F+    L +HQ  HTG+K   C  C   F+    L  H +  H G    
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTG---- 74
Query: 437 QSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKIL 496
                                                      KP+KC +C + F  +  
Sbjct: 75  ------------------------------------------EKPYKCPECGKSFSQRAN 92
Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
           L  H+  H  +  ++C  CGK+F     LR H   H+  +P+ CP C K F R+ ++  H
Sbjct: 93  LRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152
Query: 557 DRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKT 599
            R  H G+     K YKC  C K+F+   AL  HQ  HTG+KT
Sbjct: 153 QR-THTGE-----KPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           KP+KC +C + F  K  L +H+  H  +  + C  CGK+F  +  LR H   H+  +P++
Sbjct: 48  KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYA 107
Query: 540 CPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKT 599
           CP C K F +   +  H R  H G+     K YKC  C K+F+    L  HQ  HTG+K 
Sbjct: 108 CPECGKSFSQLAHLRAHQR-THTGE-----KPYKCPECGKSFSREDNLHTHQRTHTGEKP 161
Query: 600 HLCTMCPASYATIGGLRSHIKIVHHGLKT 628
           + C  C  S++    L  H +  H G KT
Sbjct: 162 YKCPECGKSFSRRDALNVHQR-THTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 53/221 (23%)
Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           KP+ C +C + F     L +H+  H  +  + C  CGK+F  K  L RH   H+  +P+ 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79
Query: 540 CPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKT 599
           CP C K F ++ ++  H R  H G+     K Y C  C K+F+ L  L  HQ  HTG+K 
Sbjct: 80  CPECGKSFSQRANLRAHQR-THTGE-----KPYACPECGKSFSQLAHLRAHQRTHTGEKP 133
Query: 600 HLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKV 659
           + C  C  S++    L +H +  H G                                  
Sbjct: 134 YKCPECGKSFSREDNLHTHQR-THTG---------------------------------- 158
Query: 660 KPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDK 700
                        KP+KC +C + F  +  LN H+  H  K
Sbjct: 159 ------------EKPYKCPECGKSFSRRDALNVHQRTHTGK 187

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 47/158 (29%)
Query: 555 GHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGG 614
           G    V Q       K Y C  C K+F+    L +HQ  HTG+K + C  C  S++    
Sbjct: 5   GSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD 64
Query: 615 LRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKP 674
           L  H +  H G                                               KP
Sbjct: 65  LTRHQR-THTG----------------------------------------------EKP 77
Query: 675 FKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
           +KC +C + F  +  L  H+  H  +  ++C  CGK+F
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF 115

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 125 LTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVY 184
           + C +CG+ FR  + L  H +SHS EKP+SCP+C  +FKRK  +S H R  H G   +V 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG---SVG 63
Query: 185 KSYKCSLCPKAFTHLAALEDH-QYVHTGQKS 214
           K Y C  C K F+    L  H + VH+G  S
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 319 GFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
           G  C  CG IF +  +L  H +SHS +KP+SC +CG RFKR++ +  H R H    V K 
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKP 65
Query: 379 YKCSLCPRVFTHLAALEDH-QFVHTGQKT 406
           Y C  C + F+    L  H + VH+G  +
Sbjct: 66  YICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 511 SCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYK 570
           +C  CGK F   Y L RH + HS  +P+SCPVC  +FKRK  ++ H R  H G    V K
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGS---VGK 64
Query: 571 SYKCSLCPKAFTYLGALEDH-QFVHTGQKT 599
            Y C  C K F+    L  H + VH+G  +
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 287 LNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQK 346
           + KP+KC +C + F     L +H++  H  +  + C  CG  FS+   L+ H  +H+ +K
Sbjct: 1   MEKPYKCPECGKSFSQSSNLQKHQR-THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 347 PFSCSLCGKRFKRENGVINHQRLHQTKK 374
           P+ C  CGK F R + +  HQR HQ KK
Sbjct: 60  PYKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 478 LNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           + KP+KC +C + F     L KH+  H  +  + C  CGK+F     L++H   H+  +P
Sbjct: 1   MEKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKP 60
Query: 538 FSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           + CP C K F R   ++ H R  HQ KK
Sbjct: 61  YKCPECGKSFSRSDHLSRHQR-THQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
           + C  CGK+F     L++H   H+  +P+ CP C K F +  D+  H R  H G+K    
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRT-HTGEK---- 59
Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
             YKC  C K+F+    L  HQ  H  +K
Sbjct: 60  -PYKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 319 GFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
           G  C +C   F  K YL+ H   H+ +KPF C  CGK + R+  ++ H+  +   +  + 
Sbjct: 7   GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66
Query: 379 YKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHG 432
           + CS+C   F     L  H   HTG+    C+ C   F     L+SHM  +H G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 512 CNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKS 571
           C  C K FL KY L+ H   H+  +PF CP C K + RK+++  H+      +   V   
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV--- 66
Query: 572 YKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG 625
           + CS+C + F     L  H   HTG+  + C+ C   +     L+SH+  +H G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
           F C  CGK+F     L  H++IHS  RP+ C  C K+F +K D+  H   +H G+K    
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEK---- 56
Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTG 596
             +KC +C KAF+    L  H   HTG
Sbjct: 57  -PHKCQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 515 CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKC 574
           CGK+F HK +  RH+ +H   RP+ C VC K+FK K  + GH + +H G      K Y+C
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTG-----IKPYEC 68
Query: 575 SLCPKAFTYLGALEDH 590
           ++C K F +  +   H
Sbjct: 69  NICAKRFMWRDSFHRH 84

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 94  LNKPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE 150
           + +P+ C  + CD+ F  K  L+ H  +HT +    C +C + F Q+  L  H+ +H+ E
Sbjct: 1   MERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGE 60
Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF+C IC ++F   H  ++H +I
Sbjct: 61  KPFACDICGRKFATLHTRTRHTKI 84

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F +K  +  H RI H G+K      ++C +C + F+  A+L  H  
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRI-HTGQK-----PFQCRICMRNFSQQASLNAHIR 55
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 56  THTGEKPFACDICGRKFATLHTRTRHTKI 84

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F +K ++  H R+ H G+K      ++C +C + F+   +L  H   
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRI-HTGQK-----PFQCRICMRNFSQQASLNAHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +AT+     H KI
Sbjct: 57  HTGEKPFACDICGRKFATLHTRTRHTKI 84

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 94  LNKPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE 150
           + +P+ C  + CD+ F     L +H  +HT +    C +C + F +   L  H+ +H+ E
Sbjct: 1   MERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF+C IC ++F R  E  +H +I
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F R  E+++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 55
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 478 LNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA 535
           + +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  
Sbjct: 1   MERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF+C +C ++F R  +   H ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F R  ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F R  E+++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 55
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 478 LNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA 535
           + +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  
Sbjct: 1   MERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF+C +C ++F R  +   H ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F R  ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 94  LNKPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE 150
           + +P+ C  + CD+ F     L +H  +HT +    C +C + F +   L  H+ +H+ E
Sbjct: 1   MERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF+C IC ++F R  E  +H +I
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F R  ++++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 55
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 478 LNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA 535
           + +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  
Sbjct: 1   MERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF+C +C ++F R  +   H ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F R  D+  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 90  ENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEG------HL----TCNLCGQTFRQKFR 139
           +   L++P K   CD+ F T   L  H  +   G      H+     C   G++F+ K++
Sbjct: 20  DEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77
Query: 140 LLNHMISHSTEKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKA 195
           L+NH+  H+ EKPF CP   C K F R   +  H R  H G+     K +KC    C + 
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGE-----KPFKCEFEGCDRR 131
Query: 196 FTHLAALEDHQYVHTGQKS 214
           F + +  + H +VHT  KS
Sbjct: 132 FANSSDRKKHMHVHTSDKS 150

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 509 YFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKL 566
           +  C   GK+F  KYKL  HI +H+  +PF CP   C K F R +++  H R  H G+  
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGE-- 118
Query: 567 IVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKT 599
              K +KC    C + F      + H  VHT  K+
Sbjct: 119 ---KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F R  E+++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 54
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 55  THTGEKPFACDICGRKFARSDERKRHTKI 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 480 KPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  +P
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 538 FSCPVCKKQFKRKQDVAGHDRV 559
           F+C +C ++F R  +   H ++
Sbjct: 62  FACDICGRKFARSDERKRHTKI 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F R  ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 55
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 56  HTGEKPFACDICGRKFARSDERKRHTKI 83

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 94  LNKPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE 150
           + +P+ C  + CD+ F     L +H  +HT +    C +C + F +   L  H+ +H+ E
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF+C IC ++F R  E  +H +I
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 478 LNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA 535
           + +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF+C +C ++F R  +   H ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F +   +  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F R  E+++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 55
Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKV 236
            HTG+K   C++C  +F        H K+
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 480 KPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  +P
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 538 FSCPVCKKQFKRKQDVAGHDRV 559
           F+C +C ++F R  +   H ++
Sbjct: 63  FACDICGRKFARSDERKRHTKI 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F R  ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 94  LNKPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE 150
           + +P+ C  + CD+ F     L +H  +HT +    C +C + F +   L  H+ +H+ E
Sbjct: 1   MERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF+C IC ++F R  E  +H +I
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 478 LNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA 535
           + +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  
Sbjct: 1   MERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF+C +C ++F R  +   H ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F    ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 121 TEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
           T+    C  CG+ F + + LL H  +H+ E+P++C IC K F+R+  +  H R +H  + 
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKE- 71
Query: 181 YNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
               K +KC  C K F     L  H+ +H    S
Sbjct: 72  ----KPFKCQECGKGFCQSRTLAVHKTLHMQTSS 101

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 507 KDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKL 566
           K  F C +CG+ F   Y L  H   H+  RP++C +C K F+R+  +  H R +H  +  
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKE-- 71
Query: 567 IVYKSYKCSLCPKAFTYLGALEDHQFVH 594
              K +KC  C K F     L  H+ +H
Sbjct: 72  ---KPFKCQECGKGFCQSRTLAVHKTLH 96

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 484 CDDCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCP 541
           C +C + F+    L +H+L+H  +  F C +  CGK F   + LR H+ IH+  RP+ CP
Sbjct: 37  CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 96
Query: 542 V--CKKQFKRKQDVAGH 556
              C K+F +  ++  H
Sbjct: 97  FDGCNKKFAQSTNLKSH 113

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 324 SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL 383
           SC   FS+K  L  H+  H+ QKPF C +C + F +  G+  H R H  +   K + C +
Sbjct: 11  SCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGE---KPFACDI 67
Query: 384 CPRVFTHLAALEDHQFVHTGQK 405
           C R F  L   + H  +H  QK
Sbjct: 68  CGRKFATLHTRDRHTKIHLRQK 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F +K ++  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRI-HTGQK-----PFQCRICMRNFSQHTGLNQHIRT 56
Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +AT+     H KI
Sbjct: 57  HTGEKPFACDICGRKFATLHTRDRHTKI 84

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQT 372
           + C  CG  FS    L  H   H+ +KP+ C  CGK F + +G+INHQR+H +
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           KP++CD  DC++RF     L +H+  H     F C  C + F     L+ H   H+  +P
Sbjct: 35  KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP 94
Query: 538 FSC--PVCKKQFKRKQDVAGH 556
           FSC  P C+K+F R  ++  H
Sbjct: 95  FSCRWPSCQKKFARSDELVRH 115

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 483 KCDDCDQRFLTKILLNKH---KLLHFDKDYFSCNYCG-----KTFLHKYKLRRHIVIHST 534
           + D C Q F ++  L  H   + +H ++  F C++ G     + F  +Y L  H+  H+ 
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 535 ARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ- 591
            +P  C    C+K + R +++  H R  H G+K  + +   CS   KAF+       HQ 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCS---KAFSNASDRAKHQN 120
Query: 592 FVHTGQKTHLCTM--CPASYATIGGLRSHIKIVH 623
             H+ +K ++C +  C   Y     LR H+K VH
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
           K YKC  C  +F Y G L  H+ VHTG+K + C +C A +     L++H +I H G K
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI-HSGEK 72

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 121 TEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
           + G   C +CG+ F +K +L  HM  H+  KP+ C  C         ++KH RI      
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI------ 58
Query: 181 YNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQ 212
           ++  + +KC +CP A  + + L  H   HTG 
Sbjct: 59  HSDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 316 NKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKV 375
           + G   C  CG  FS K  L+ HM  H+  KP+ C  C       + +  H R+H  +  
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE-- 62
Query: 376 YKSYKCSLCPRVFTHLAALEDHQFVHTGQ 404
            + +KC +CP    + + L  H   HTG 
Sbjct: 63  -RPFKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
           + YKC  C K+F+H + L  H+  HTG+K + C+ C   F  +  L+GH +V
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           + C+ CG  FS    L  H  +H+ +KP+ C  CGK F + + +I H R+H
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV 559
           ++  + C+ CGK+F H   L +H   H+  +P+ C  C K F ++  + GH RV
Sbjct: 15  ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSY 187
           CG  + + ++L  H+  H+ EKPF C    C+K F   H +++H  + H G+K     S 
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSD 78
Query: 188 KCSL-----------------------------CPKAFTHLAALEDHQYVHTGQKSHMC- 217
            C L                             C KAF     L+ HQ+ HT Q  + C 
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138
Query: 218 -NLCSARFTCKGALLGHIKVLHEGY 241
              C  RF+    L  H KV H GY
Sbjct: 139 HEGCDKRFSLPSRLKRHEKV-HAGY 162

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINH-QRLH 370
           F C  C   F+ +++L+ H  SH+ +KP+ C LC + F R + +I H Q++H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 121 TEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGK 179
           +E    CN CG+T+R    L  H  +H   +P SCP C K F+ + EV++H + VHQ K
Sbjct: 1   SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQNK 58

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGK 564
           F CN+CGKT+     L RH   H   RP SCP C K F+ + +V  H + VHQ K
Sbjct: 5   FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQNK 58

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 321 TCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVY 376
           TC+   CG  +++  +L+ H+ +H+ +KP+ C    CG +F R + +  H R H     +
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG---H 63
Query: 377 KSYKCSLCPRVFT---HLA 392
           + ++C  C R F+   HLA
Sbjct: 64  RPFQCQKCDRAFSRSDHLA 82

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 321 TCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVY 376
           TC+   CG  +++  +L+ H+ +H+ +KP+ C    CG +F R + +  H R H     +
Sbjct: 8   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG---H 64
Query: 377 KSYKCSLCPRVFT---HLA 392
           + ++C  C R F+   HLA
Sbjct: 65  RPFQCQKCDRAFSRSDHLA 83

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 127 CNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVH 176
           C +C + F +   L  H+ +H+ EKPF+C IC ++F R  E  +H  I H
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQ 367
           F C  C   FS   +L  H+ +H+ +KPF+C +CG++F R +    H+
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	712
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-25
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-25
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-19
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-15
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	9e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	7e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (261), Expect = 1e-25
 Identities = 62/238 (26%), Positives = 91/238 (38%), Gaps = 55/238 (23%)

Query: 133 TFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLC 192
           +       +        EKP++CP C K F R   +++H R  H G+     K YKC  C
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-HTGE-----KPYKCPEC 55

Query: 193 PKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSH 252
            K+F+    L  HQ  HTG+K + C  C   F+ +  L  H +  H G K          
Sbjct: 56  GKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEK---------- 104

Query: 253 ESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQ 312
                                                P+ C +C + F     L  H++ 
Sbjct: 105 -------------------------------------PYACPECGKSFSQLAHLRAHQR- 126

Query: 313 MHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
            H  +  + C  CG  FS +  L  H  +H+ +KP+ C  CGK F R + +  HQR H
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  103 bits (259), Expect = 1e-25
 Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 58/244 (23%)

Query: 162 FKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCS 221
                       +   G+K      Y C  C K+F+    L +HQ  HTG+K + C  C 
Sbjct: 3   EFGSSSSVAQAAL-EPGEK-----PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECG 56

Query: 222 ARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDS 281
             F+ K  L  H +  H G K                                       
Sbjct: 57  KSFSDKKDLTRH-QRTHTGEK--------------------------------------- 76

Query: 282 KEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMIS 341
                   P+KC +C + F  +  L  H++  H  +  + C  CG  FS+  +LR H  +
Sbjct: 77  --------PYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRT 127

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVH 401
           H+ +KP+ C  CGK F RE+ +  HQR H T +  K YKC  C + F+   AL  HQ  H
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTHQRTH-TGE--KPYKCPECGKSFSRRDALNVHQRTH 184

Query: 402 TGQK 405
           TG+K
Sbjct: 185 TGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (252), Expect = 1e-24
 Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 7/139 (5%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+ C +C + F     L +H+  HT E    C  CG++F  K  L  H  +H+ EKP+ 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           CP C K F ++  +  H R  H G+K      Y C  C K+F+ LA L  HQ  HTG+K 
Sbjct: 80  CPECGKSFSQRANLRAHQRT-HTGEK-----PYACPECGKSFSQLAHLRAHQRTHTGEKP 133

Query: 215 HMCNLCSARFTCKGALLGH 233
           + C  C   F+ +  L  H
Sbjct: 134 YKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (251), Expect = 2e-24
 Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 7/139 (5%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC +C + F  K  L +H+  HT E    C  CG++F Q+  L  H  +H+ EKP++
Sbjct: 48  KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYA 107

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKS 214
           CP C K F +   +  H R  H G+K      YKC  C K+F+    L  HQ  HTG+K 
Sbjct: 108 CPECGKSFSQLAHLRAHQRT-HTGEK-----PYKCPECGKSFSREDNLHTHQRTHTGEKP 161

Query: 215 HMCNLCSARFTCKGALLGH 233
           + C  C   F+ + AL  H
Sbjct: 162 YKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (251), Expect = 2e-24
 Identities = 71/270 (26%), Positives = 96/270 (35%), Gaps = 84/270 (31%)

Query: 329 FSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVF 388
                           +KP++C  CGK F R + +  HQR H T +  K YKC  C + F
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH-TGE--KPYKCPECGKSF 59

Query: 389 THLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTC 448
           +    L  HQ  HTG+K   C  C   F+    LR+H +  H G                
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTG---------------- 102

Query: 449 SVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD 508
                                          KP+ C +C                     
Sbjct: 103 ------------------------------EKPYACPEC--------------------- 111

Query: 509 YFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIV 568
                  GK+F     LR H   H+  +P+ CP C K F R+ ++  H R  H G+    
Sbjct: 112 -------GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-THTGE---- 159

Query: 569 YKSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
            K YKC  C K+F+   AL  HQ  HTG+K
Sbjct: 160 -KPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 91.0 bits (227), Expect = 3e-21
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 50/213 (23%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
           + C  CG  FS   +L  H  +H+ +KP+ C  CGK F  +  +  HQR H T +  K Y
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH-TGE--KPY 78

Query: 380 KCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSC 439
           KC  C + F+  A L  HQ  HTG+K   C  C   F+ +  LR+H +  H G       
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTG------- 130

Query: 440 QSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNK 499
                                                   KP+KC +C + F  +  L+ 
Sbjct: 131 ---------------------------------------EKPYKCPECGKSFSREDNLHT 151

Query: 500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIH 532
           H+  H  +  + C  CGK+F  +  L  H   H
Sbjct: 152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 91.0 bits (227), Expect = 3e-21
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC +C + F  +  L  H+  HT E    C  CG++F Q   L  H  +H+ EKP+ 
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYK 135

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
           CP C K F R+  +  H R  H G+K      YKC  C K+F+   AL  HQ  HTG+K
Sbjct: 136 CPECGKSFSREDNLHTHQRT-HTGEK-----PYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 88.3 bits (220), Expect = 3e-20
 Identities = 60/240 (25%), Positives = 89/240 (37%), Gaps = 54/240 (22%)

Query: 388 FTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKT 447
               ++      +  G+K   C  C   F+    L  H +  H G               
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-HTG--------------- 46

Query: 448 CSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDK 507
                                           KP+KC +C + F  K  L +H+  H  +
Sbjct: 47  -------------------------------EKPYKCPECGKSFSDKKDLTRHQRTHTGE 75

Query: 508 DYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLI 567
             + C  CGK+F  +  LR H   H+  +P++CP C K F +   +  H R  H G+K  
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEK-- 132

Query: 568 VYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
               YKC  C K+F+    L  HQ  HTG+K + C  C  S++    L  H +  H G K
Sbjct: 133 ---PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT-HTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.7 bits (216), Expect = 8e-20
 Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 5/146 (3%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
           KP+ C +C + F     L +H++  H  +  + C  CG  FS+KK L  H  +H+ +KP+
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78

Query: 349 SCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRL 408
            C  CGK F +   +  HQR H T +  K Y C  C + F+ LA L  HQ  HTG+K   
Sbjct: 79  KCPECGKSFSQRANLRAHQRTH-TGE--KPYACPECGKSFSQLAHLRAHQRTHTGEKPYK 135

Query: 409 CTMCPAIFASIGGLRSHMKIVHHGLK 434
           C  C   F+    L +H +  H G K
Sbjct: 136 CPECGKSFSREDNLHTHQRT-HTGEK 160

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 78.6 bits (195), Expect = 6e-17
 Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 53/203 (26%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
           ++C  CGK+F     L  H   H+  +P+ CP C K F  K+D+  H R  H G+K    
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTGEK---- 76

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ 629
             YKC  C K+F+    L  HQ  HTG+K + C  C  S++ +  LR+H +  H G    
Sbjct: 77  -PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTG---- 130

Query: 630 QSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKIL 689
                                                      KP+KC +C + F  +  
Sbjct: 131 ------------------------------------------EKPYKCPECGKSFSREDN 148

Query: 690 LNKHKLLHFDKDYFSCNYCGKTF 712
           L+ H+  H  +  + C  CGK+F
Sbjct: 149 LHTHQRTHTGEKPYKCPECGKSF 171

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKP 152
           KP+KC +C + F  +  L+ H+  HT E    C  CG++F ++  L  H  +H+ +K 
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.2 bits (116), Expect = 2e-06
 Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 53/166 (31%)

Query: 547 FKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCP 606
                       +   G+K      Y C  C K+F+    L +HQ  HTG+K + C  C 
Sbjct: 3   EFGSSSSVAQAAL-EPGEK-----PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECG 56

Query: 607 ASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSK 666
            S++    L  H +  H G                                         
Sbjct: 57  KSFSDKKDLTRHQRT-HTG----------------------------------------- 74

Query: 667 EYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF 712
                 KP+KC +C + F  +  L  H+  H  +  ++C  CGK+F
Sbjct: 75  -----EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 90.3 bits (225), Expect = 9e-22
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 11/124 (8%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHM---ISHSTEK 151
              +C  C + FL+K  L  H   HT E    C  CG+ + +K  LL H      + +E+
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65

Query: 152 PFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY-VHT 210
            F+C +C++ F+R+ E+  H    H G+       YKCS C + F     L+ H   +H+
Sbjct: 66  VFTCSVCQETFRRRMELRLHMVS-HTGE-----MPYKCSSCSQQFMQKKDLQSHMIKLHS 119

Query: 211 GQKS 214
           G  S
Sbjct: 120 GPSS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 87.6 bits (218), Expect = 9e-21
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRI--VHQGKKYNV 183
            C  C + F  K+ L  H   H+ EKPF CP C K + RK  + +H+    +++ ++   
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ--- 65

Query: 184 YKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
              + CS+C + F     L  H   HTG+  + C+ CS +F  K  L  H+  LH G  
Sbjct: 66  --VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 85.6 bits (213), Expect = 4e-20
 Identities = 35/116 (30%), Positives = 54/116 (46%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
             C +C   F  K YL+ H   H+ +KPF C  CGK + R+  ++ H+  +   +  + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 380 KCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKT 435
            CS+C   F     L  H   HTG+    C+ C   F     L+SHM  +H G  +
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 10/124 (8%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRH---IVIHSTAR 536
              +C  C ++FL+K  L  H   H  +  F C  CGK +  K  L  H     ++ + +
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65

Query: 537 PFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQF-VHT 595
            F+C VC++ F+R+ ++  H    H G+       YKCS C + F     L+ H   +H+
Sbjct: 66  VFTCSVCQETFRRRMELRLHMV-SHTGE-----MPYKCSSCSQQFMQKKDLQSHMIKLHS 119

Query: 596 GQKT 599
           G  +
Sbjct: 120 GPSS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 3e-18
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDR--VVHQGKKLI 567
             C  C K FL KY L+ H   H+  +PF CP C K + RK+++  H+    +++ +   
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE--- 64

Query: 568 VYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
             + + CS+C + F     L  H   HTG+  + C+ C   +     L+SH+  +H G  
Sbjct: 65  --QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

Query: 628 T 628
           +
Sbjct: 123 S 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 3e-18
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHM---ISHSTQ 345
              +C  C + FLSK  L  H +  H  +  F C  CG  +  K+ L  H      + ++
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 346 KPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQF-VHTGQ 404
           + F+CS+C + F+R   +  H   H  +     YKCS C + F     L+ H   +H+G 
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGE---MPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

Query: 405 KT 406
            +
Sbjct: 122 SS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQ--- 398
            S      C  C K+F  +  +  H R H  +   K ++C  C + +     L +H+   
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEHEARN 58

Query: 399 FVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLK 434
            ++  ++   C++C   F     LR HM   H G  
Sbjct: 59  CMNRSEQVFTCSVCQETFRRRMELRLHMVS-HTGEM 93

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 51.7 bits (125), Expect = 3e-08
 Identities = 26/154 (16%), Positives = 44/154 (28%), Gaps = 48/154 (31%)

Query: 377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKI--VHHGLK 434
              +C  C + F     L+ H   HTG+K   C  C   +     L  H     ++    
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-- 63

Query: 435 TQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTK 494
                                                        + F C  C + F  +
Sbjct: 64  --------------------------------------------EQVFTCSVCQETFRRR 79

Query: 495 ILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRH 528
           + L  H + H  +  + C+ C + F+ K  L+ H
Sbjct: 80  MELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
            S +    CP C K+F  K  +  H+R  H G+     K ++C  C K +     L +H+
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGE-----KPFECPKCGKCYFRKENLLEHE 55

Query: 592 ---FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
               ++  ++   C++C  ++     LR H+   H G  
Sbjct: 56  ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS-HTGEM 93

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 25/145 (17%), Positives = 39/145 (26%), Gaps = 48/145 (33%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSH--IKIVHHGLK 627
              +C  C K F     L+ H   HTG+K   C  C   Y     L  H     ++    
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-- 63

Query: 628 TQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTK 687
                                                        + F C  C + F  +
Sbjct: 64  --------------------------------------------EQVFTCSVCQETFRRR 79

Query: 688 ILLNKHKLLHFDKDYFSCNYCGKTF 712
           + L  H + H  +  + C+ C + F
Sbjct: 80  MELRLHMVSHTGEMPYKCSSCSQQF 104

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 86.5 bits (215), Expect = 1e-19
 Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 16/158 (10%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHKLLHT-EGHLTCN--LCGQTFRQKFRLLNHMISHSTE 150
           K + C   DC   +     L  H   HT E    C    C + F     L  H ++H+ E
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 151 KPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALEDHQ 206
           K F+C    C  +F  K  + KH        K  V   Y C    C KAF     L+ HQ
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKICV---YVCHFENCGKAFKKHNQLKVHQ 126

Query: 207 YVHTGQKSHMCN--LCSARFTCKGALLGHIKVLHEGYK 242
           + HT Q  + C    C  RF+    L  H KV H GY 
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYP 163

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 17/155 (10%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHKLLHT-EGHLTCN--LCGQTFRQKFRLLNHMISHSTE 150
           KPF C    C++ F +   L +H L HT E + TC+   C   F  K  +  H       
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

Query: 151 K--PFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS--LCPKAFTHLAALED 204
           K   + C    C K FK+ +++  H    H  +       Y+C    C K F+  + L+ 
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFS-HTQQL-----PYECPHEGCDKRFSLPSRLKR 154

Query: 205 HQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHE 239
           H+ VH G      + CS         L H+   H+
Sbjct: 155 HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 45/236 (19%), Positives = 68/236 (28%), Gaps = 58/236 (24%)

Query: 337 NHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCS--LCPRVFTHLA 392
                    K + CS   CG  + +   +  H   H T +  K + C    C + FT L 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH-TGE--KPFPCKEEGCEKGFTSLH 58

Query: 393 ALEDHQFVHTGQKTRLCT--MCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSV 450
            L  H   HTG+K   C    C   F +   ++ H     H +K                
Sbjct: 59  HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKI--------------- 102

Query: 451 DEINKENEEGATIRKVKPHEDSKEYMALNKPFKC--DDCDQRFLTKILLNKHKLLHFDKD 508
                                          + C  ++C + F     L  H+  H  + 
Sbjct: 103 -----------------------------CVYVCHFENCGKAFKKHNQLKVHQFSHTQQL 133

Query: 509 YFSCN--YCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQ 562
            + C    C K F    +L+RH  +H+         C    K       H    HQ
Sbjct: 134 PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.0 bits (180), Expect = 6e-15
 Identities = 48/244 (19%), Positives = 73/244 (29%), Gaps = 68/244 (27%)

Query: 141 LNHMISHSTEKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS--LCPKAF 196
           +         K + C    C   + +  ++  H    H G+     K + C    C K F
Sbjct: 1   MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGE-----KPFPCKEEGCEKGF 54

Query: 197 THLAALEDHQYVHTGQKSHMCN--LCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHES 254
           T L  L  H   HTG+K+  C+   C  RFT K  +  H        K            
Sbjct: 55  TSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKI----------- 102

Query: 255 KTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKC--DDCFQCFLSKILLNQHKKQ 312
                                               + C  ++C + F     L  H+  
Sbjct: 103 ----------------------------------CVYVCHFENCGKAFKKHNQLKVHQFS 128

Query: 313 MHFNKGGFTCN--SCGLIFSEKKYLRNHMISHS---TQKPFSCSLCGKRFKRENGVINHQ 367
            H  +  + C    C   FS    L+ H   H+    +K  SCS  GK +     + +  
Sbjct: 129 -HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWT--LYLKHVA 185

Query: 368 RLHQ 371
             HQ
Sbjct: 186 ECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.3 bits (173), Expect = 4e-14
 Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 15/158 (9%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTA 535
           K + C   DC   +     L  H   H  +  F C    C K F   + L RH + H+  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 536 RPFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQ 591
           + F+C    C  +F  K ++  H        K+     Y C    C KAF     L+ HQ
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKI---CVYVCHFENCGKAFKKHNQLKVHQ 126

Query: 592 FVHTGQKTHLCT--MCPASYATIGGLRSHIKIVHHGLK 627
           F HT Q  + C    C   ++    L+ H K+ H G  
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYP 163

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 69.9 bits (172), Expect = 5e-14
 Identities = 46/219 (21%), Positives = 69/219 (31%), Gaps = 51/219 (23%)

Query: 115 KHKLLHT-EGHLTCNL--CGQTFRQKFRLLNHMISHSTEKPFSC--PICKKQFKRKHEVS 169
             K L        C+   CG  + + ++L  H+  H+ EKPF C    C+K F   H ++
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 170 KHDRIVHQGKKYNVYKSYKCS--LCPKAFTHLAALEDHQYVHTGQKSH--MCNL--CSAR 223
           +H    H G+     K++ C    C   FT  A ++ H       K    +C+   C   
Sbjct: 62  RHSLT-HTGE-----KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA 115

Query: 224 FTCKGALLGHIKVLHEG---YKRPQESC-----QSSHESKTCSVDEINKENEEGATIRKV 275
           F     L  H    H     Y+ P E C       S                     R  
Sbjct: 116 FKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSR------------------LKRHE 156

Query: 276 KPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMH 314
           K H          K   C    + +       +H  + H
Sbjct: 157 KVHAGYPCK----KDDSCSFVGKTWTL---YLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 59/244 (24%), Positives = 79/244 (32%), Gaps = 67/244 (27%)

Query: 364 INHQRLHQTKKVYKSYKCSL--CPRVFTHLAALEDHQFVHTGQKTRLCT--MCPAIFASI 419
           +  + L     VYK Y CS   C   +     L+ H   HTG+K   C    C   F S+
Sbjct: 1   MGEKALP---VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSL 57

Query: 420 GGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALN 479
             L  H    H G                                               
Sbjct: 58  HHLTRHSLT-HTG----------------------------------------------E 70

Query: 480 KPFKCDD--CDQRFLTKILLNKHKLLHF-DKDY-FSCNY--CGKTFLHKYKLRRHIVIHS 533
           K F CD   CD RF TK  + KH       K   + C++  CGK F    +L+ H   H+
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130

Query: 534 TARPFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
              P+ C    C K+F     +  H++ VH G      K   CS   K +T    L+   
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPC--KKDDSCSFVGKTWTLY--LKHVA 185

Query: 592 FVHT 595
             H 
Sbjct: 186 ECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 47/217 (21%), Positives = 74/217 (34%), Gaps = 49/217 (22%)

Query: 205 HQYVHTGQKSHMCNL--CSARFTCKGALLGHIKVLHEG---YKRPQESC-----QSSHES 254
            + +    K ++C+   C A +     L  H+   H G   +   +E C        H  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHH-- 59

Query: 255 KTCSVDEINKENEEGATIRKVKPH--EDSKEYMALNKPFKCDD--CFQCFLSKILLNQHK 310
                             R    H  E         K F CD   C   F +K  + +H 
Sbjct: 60  ----------------LTRHSLTHTGE---------KNFTCDSDGCDLRFTTKANMKKHF 94

Query: 311 KQMHFNKGG-FTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCS--LCGKRFKRENGVIN 365
            + H  K   + C+   CG  F +   L+ H  SH+ Q P+ C    C KRF   + +  
Sbjct: 95  NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHT 402
           H+++H      K   CS   + +T    L+     H 
Sbjct: 155 HEKVHAGYPCKKDDSCSFVGKTWTLY--LKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.8 bits (164), Expect = 6e-13
 Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 16/154 (10%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCN--YCGKTFLHKYKLRRHIVIHST- 534
           KPF C    C++ F +   L +H L H  +  F+C+   C   F  K  +++H       
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

Query: 535 -ARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCS--LCPKAFTYLGALED 589
               + C    C K FK+   +  H    H  +       Y+C    C K F+    L+ 
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFS-HTQQLP-----YECPHEGCDKRFSLPSRLKR 154

Query: 590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH 623
           H+ VH G        C     T      H+   H
Sbjct: 155 HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 14/152 (9%)

Query: 289 KPFKCD--DCFQCFLSKILLNQHKKQMHFNKGGFTCN--SCGLIFSEKKYLRNHMISHST 344
           KPF C    C + F S   L +H    H  +  FTC+   C L F+ K  ++ H      
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99

Query: 345 QK--PFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCS--LCPRVFTHLAALEDHQ 398
            K   + C    CGK FK+ N +  HQ  H T++    Y+C    C + F+  + L+ H+
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSH-TQQ--LPYECPHEGCDKRFSLPSRLKRHE 156

Query: 399 FVHTGQKTRLCTMCPAIFASIGGLRSHMKIVH 430
            VH G   +    C  +  +      H+   H
Sbjct: 157 KVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 59.1 bits (144), Expect = 3e-10
 Identities = 48/227 (21%), Positives = 77/227 (33%), Gaps = 69/227 (30%)

Query: 320 FTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCS--LCGKRFKRENGVINHQRLHQTKKV 375
           + C+   CG  +++   L+ H+  H+ +KPF C    C K F   + +  H   H T + 
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH-TGE- 70

Query: 376 YKSYKCS--LCPRVFTHLAALEDHQFVHTGQKTR--LCTM--CPAIFASIGGLRSHMKIV 429
            K++ C    C   FT  A ++ H       K    +C    C   F     L+ H    
Sbjct: 71  -KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS- 128

Query: 430 HHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKC--DDC 487
           H                                                  P++C  + C
Sbjct: 129 HTQ----------------------------------------------QLPYECPHEGC 142

Query: 488 DQRFLTKILLNKHKLLH----FDKDYFSCNYCGKTF--LHKYKLRRH 528
           D+RF     L +H+ +H      KD  SC++ GKT+    K+    H
Sbjct: 143 DKRFSLPSRLKRHEKVHAGYPCKKDD-SCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 43/200 (21%), Positives = 69/200 (34%), Gaps = 40/200 (20%)

Query: 528 HIVIHSTARPFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCS--LCPKAFTY 583
              +    + + C    C   + +   +  H    H G+K      + C    C K FT 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGEK-----PFPCKEEGCEKGFTS 56

Query: 584 LGALEDHQFVHTGQKTHLCT--MCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTC 641
           L  L  H   HTG+K   C    C   + T   ++ H     H +K             C
Sbjct: 57  LHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKICVY--------VC 107

Query: 642 SVDEINKE-NEEGATIRKVKPH--EDSKEYMALNKPFKC--DDCDQRFLTKILLNKHKLL 696
             +   K   +          H  +          P++C  + CD+RF     L +H+ +
Sbjct: 108 HFENCGKAFKKHNQLKVHQFSHTQQ---------LPYECPHEGCDKRFSLPSRLKRHEKV 158

Query: 697 H----FDKDYFSCNYCGKTF 712
           H      KD  SC++ GKT+
Sbjct: 159 HAGYPCKKDD-SCSFVGKTW 177

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 96  KPFKCDDCDQCFLTKILLNKH---KLLHT-EGHLTCNLCGQT-----FRQKFRLLNHMIS 146
              + D C Q F ++  L  H   + +H       C+  G +     F+ ++ L+ HM  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 147 HSTEKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKC--SLCPKAFTHLAAL 202
           H+ EKP  C    C+K + R   +  H R  H G+     K Y C    C KAF++ +  
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGE-----KPYMCEHEGCSKAFSNASDR 115

Query: 203 EDHQY-VHTGQKSHMCNL--CSARFTCKGALLGHIKV 236
             HQ   H+ +K ++C L  C+ R+T   +L  H+K 
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.9 bits (198), Expect = 1e-17
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 289 KPFKCDDCFQCFLSKILLNQH--KKQMHFNKGGFTCNSCGLI-----FSEKKYLRNHMIS 341
              + D C Q F S+  L  H   + +H  +  F C+  G       F  +  L  HM  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 342 HSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKC--SLCPRVFTHLAALEDH 397
           H+ +KP  C+   C K + R   +  H R H T +  K Y C    C + F++ +    H
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSH-TGE--KPYMCEHEGCSKAFSNASDRAKH 118

Query: 398 QF-VHTGQKTRLCTM--CPAIFASIGGLRSHMKIVHHG 432
           Q   H+ +K  +C +  C   +     LR H+K   HG
Sbjct: 119 QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT-VHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)

Query: 480 KPFKCDDCDQRFLTKILLNKH---KLLHFDKDYFSCNYCG-----KTFLHKYKLRRHIVI 531
              + D C Q F ++  L  H   + +H ++  F C++ G     + F  +Y L  H+  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 532 HSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKC--SLCPKAFTYLGAL 587
           H+  +P  C    C+K + R +++  H R  H G+     K Y C    C KAF+     
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGE-----KPYMCEHEGCSKAFSNASDR 115

Query: 588 EDHQF-VHTGQKTHLCTM--CPASYATIGGLRSHIKIVHHG 625
             HQ   H+ +K ++C +  C   Y     LR H+K   HG
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT-VHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 320 FTCNSCGLIFSEKKYLRNHMIS---HSTQKPFSCSLCG-----KRFKRENGVINHQRLHQ 371
              + C   F  ++ L +H+ S   H  +K F C   G     + FK +  ++ H R H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH- 62

Query: 372 TKKVYKSYKCSL--CPRVFTHLAALEDHQFVHTGQKTRLCT--MCPAIFASIGGLRSHMK 427
           T +  K +KC+   C + ++ L  L+ H   HTG+K  +C    C   F++      H  
Sbjct: 63  TGE--KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 428 IVHHGLK 434
             H   K
Sbjct: 121 RTHSNEK 127

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 23/120 (19%)

Query: 150 EKPFSCPICKKQFKRKHEVSKHDRI--VHQGKKYNVYKSYKC-----SLCPKAFTHLAAL 202
           E       C ++F  + ++  H     +H  +     K + C     S   + F     L
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGER-----KEFVCHWGGCSRELRPFKAQYML 55

Query: 203 EDHQYVHTGQKSHMCNL--CSARFTCKGALLGHIKVLHEG---YKRPQESC-----QSSH 252
             H   HTG+K H C    C   ++    L  H++  H G   Y    E C      +S 
Sbjct: 56  VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASD 114

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 82.9 bits (206), Expect = 2e-19
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
            +  +L    +    C  CG+ F + + LL H  +H+ E+P++C IC K F+R+  +  H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 172 DRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
             I H  +     K +KC  C K F     L  H+ +H    S    
Sbjct: 65  RYI-HSKE-----KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 71.7 bits (177), Expect = 2e-15
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
            +  +L    K  F C +CG+ F   Y L  H   H+  RP++C +C K F+R+  +  H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 557 DRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
              +H  +     K +KC  C K F     L  H+ +H    +    
Sbjct: 65  RY-IHSKE-----KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.5 bits (174), Expect = 4e-15
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
                +   T+K F C  C + F + + +  H+R  H  ++      Y C +C KAF   
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-HTDER-----PYTCDICHKAFRRQ 58

Query: 200 AALEDHQYVHTGQKSHMCNLCSARFTCKGALLGH 233
             L DH+Y+H+ +K   C  C   F     L  H
Sbjct: 59  DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 64.4 bits (158), Expect = 7e-13
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
           K F C  C + F     L  H++  H ++  +TC+ C   F  + +LR+H   HS +KPF
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74

Query: 349 SCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
            C  CGK F +   +  H+ LH  +    S   +
Sbjct: 75  KCQECGKGFCQSRTLAVHKTLH-MQT--SSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.2 bits (155), Expect = 2e-12
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 334 YLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAA 393
                 +   T+K F C  CG+ F +   ++ H+R H  +   + Y C +C + F     
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE---RPYTCDICHKAFRRQDH 60

Query: 394 LEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKI 428
           L DH+++H+ +K   C  C   F     L  H  +
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.1 bits (134), Expect = 1e-09
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 525 LRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYL 584
                +   T + F C  C + F +  ++  H+R  H  ++      Y C +C KAF   
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-HTDER-----PYTCDICHKAFRRQ 58

Query: 585 GALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
             L DH+++H+ +K   C  C   +     L  H K +H    
Sbjct: 59  DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH-KTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.4 bits (127), Expect = 1e-08
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           +P+ CD C + F  +  L  H+ +H+ E    C  CG+ F Q   L  H   H      +
Sbjct: 44  RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

Query: 155 C 155
            
Sbjct: 104 A 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 26/61 (42%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           +P+ CD C + F  +  L  H+ +H  +  F C  CGK F     L  H  +H      +
Sbjct: 44  RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

Query: 540 C 540
            
Sbjct: 104 A 104

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT----------EGHLTCNLCGQTFRQKFRLLNHMI 145
                  CD+ F T   L  H  +                 C   G++F+ K++L+NH+ 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 146 SHSTEKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAA 201
            H+ EKPF CP   C K F R   +  H R  H G+     K +KC    C + F + + 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGE-----KPFKCEFEGCDRRFANSSD 137

Query: 202 LEDHQYVHTGQKSHMCN 218
            + H +VHT  KS   +
Sbjct: 138 RKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 19/137 (13%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLH---------FDKDYFSCNYCGKTFLHKYKLRRHIV 530
                  CD+ F T   L  H  +              +  C   GK+F  KYKL  HI 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 531 IHSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGA 586
           +H+  +PF CP   C K F R +++  H R  H G+     K +KC    C + F     
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGE-----KPFKCEFEGCDRRFANSSD 137

Query: 587 LEDHQFVHTGQKTHLCT 603
            + H  VHT  K+   +
Sbjct: 138 RKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.5 bits (176), Expect = 8e-15
 Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 15/134 (11%)

Query: 289 KPFKCDDCFQCFLSKILLNQHK--------KQMHFNKGGFTCNSCGLIFSEKKYLRNHMI 340
                  C + F +   L  H         +Q +       C   G  F  K  L NH+ 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 341 SHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPRVFTHLAALED 396
            H+ +KPF C    CGK F R   +  H+R H T +  K +KC    C R F + +  + 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTH-TGE--KPFKCEFEGCDRRFANSSDRKK 140

Query: 397 HQFVHTGQKTRLCT 410
           H  VHT  K+   +
Sbjct: 141 HMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 32/136 (23%), Positives = 46/136 (33%), Gaps = 14/136 (10%)

Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYN---VYKS 186
            G + +   + L+       +       C + F   HE+  H  + H G       V   
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 187 YKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNL--CSARFTCKGALLGHIKVLHEG---Y 241
            +C    K+F     L +H  VHTG+K   C    C   F     L  H +  H G   +
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKPF 121

Query: 242 KRPQESC-----QSSH 252
           K   E C      SS 
Sbjct: 122 KCEFEGCDRRFANSSD 137

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 36/153 (23%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 295 DCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFS----- 349
                          K  +   +      SC   FS    L  H+       P       
Sbjct: 2   SSGSSGQPIKQELSCK-WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 350 ----CSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPRVFTHLAALEDHQFVHTG 403
               C   GK FK +  ++NH R+H T +  K + C    C ++F     L+ H+  HTG
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVH-TGE--KPFPCPFPGCGKIFARSENLKIHKRTHTG 117

Query: 404 QKTRLCTM--CPAIFASIGGLRSHMKIVHHGLK 434
           +K   C    C   FA+    + HM + H   K
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHV-HTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS---------CPVCKKQFKRK 550
            K +   +       C +TF   ++L  H+ +     P           CP   K FK K
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75

Query: 551 QDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTM--CP 606
             +  H R VH G+     K + C    C K F     L+ H+  HTG+K   C    C 
Sbjct: 76  YKLVNHIR-VHTGE-----KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCD 129

Query: 607 ASYATIGGLRSHIKIVHHGLK 627
             +A     + H+ + H   K
Sbjct: 130 RRFANSSDRKKHMHV-HTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 5/112 (4%)

Query: 515 CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGK---KLIVYKS 571
            G +     +      I           C + F    ++  H  + H G       V   
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 572 YKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKI 621
            +C    K+F     L +H  VHTG+K   C    C   +A    L+ H + 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 36/196 (18%), Positives = 63/196 (32%), Gaps = 49/196 (25%)

Query: 192 CPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLH-EGYKRPQESCQS 250
              +   +      +++   Q S     C   F+    L+ H+ + H  G ++    C  
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-- 60

Query: 251 SHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKILLNQHK 310
                                                    +C    + F +K  L  H 
Sbjct: 61  --------------------------------------YWEECPREGKSFKAKYKLVNHI 82

Query: 311 KQMHFNKGGFTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINH 366
           + +H  +  F C    CG IF+  + L+ H  +H+ +KPF C    C +RF   +    H
Sbjct: 83  R-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141

Query: 367 QRLHQTKKVYKSYKCS 382
             +H +    KS   S
Sbjct: 142 MHVHTSD---KSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 63/201 (31%)

Query: 353 CGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK------- 405
            G   +     ++ + + + +    S     C R F+ +  L  H  +            
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQL---SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 406 --TRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATI 463
                C      F +   L +H+++ H G                               
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIRV-HTG------------------------------- 87

Query: 464 RKVKPHEDSKEYMALNKPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTF 519
                           KPF C    C + F     L  HK  H  +  F C +  C + F
Sbjct: 88  ---------------EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF 132

Query: 520 LHKYKLRRHIVIHSTARPFSC 540
            +    ++H+ +H++ +    
Sbjct: 133 ANSSDRKKHMHVHTSDKSGPS 153

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
           +   C    C + F     + KH   H      C  CG+ F +  +L  H + H+ EKPF
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63

Query: 154 SCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALEDHQYVH 209
            C    C K+F     +  H RI H G      + Y C    C K F     L+ H   H
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRI-HTGD-----RPYVCPFDGCNKKFAQSTNLKSHILTH 117

Query: 210 TGQKSH 215
              K++
Sbjct: 118 AKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 73.7 bits (182), Expect = 6e-16
 Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 13/125 (10%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           +   C    C + F     + KH   H  + +  C  CGK F+   KL+RH ++H+  +P
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVH-VCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 538 FSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFV 593
           F C    C K+F    ++  H R +H G      + Y C    C K F     L+ H   
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVR-IHTGD-----RPYVCPFDGCNKKFAQSTNLKSHILT 116

Query: 594 HTGQK 598
           H   K
Sbjct: 117 HAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 71.8 bits (177), Expect = 3e-15
 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 11/123 (8%)

Query: 289 KPFKCD--DCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQK 346
           +   C    C + F     + +H    H  +    C  CG  F E   L+ H + H+ +K
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLH-THGPRV-HVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 347 PFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPRVFTHLAALEDHQFVHT 402
           PF C+   CGKRF  +  +  H R+H T    + Y C    C + F     L+ H   H 
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIH-TGD--RPYVCPFDGCNKKFAQSTNLKSHILTHA 118

Query: 403 GQK 405
             K
Sbjct: 119 KAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 20/115 (17%)

Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
            +  +CP   C K F+    + KH    H G +      + C+ C KAF   + L+ HQ 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHT-H-GPR-----VHVCAECGKAFVESSKLKRHQL 55

Query: 208 VHTGQKSHMCNL--CSARFTCKGALLGHIKVLHEG---YKRPQESC-----QSSH 252
           VHTG+K   C    C  RF+    L  H+++ H G   Y  P + C     QS++
Sbjct: 56  VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTN 109

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNS--CGLIFSEKKYLRNHMISHSTQK 346
           +   C +C + F+    L +H+  +H  +  F C    CG  FS    LR H+  H+  +
Sbjct: 33  RVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91

Query: 347 PFSCSL--CGKRFKRENGVINHQRLHQTKKVYK 377
           P+ C    C K+F +   + +H   H   K  +
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           R  +CP   C K F+    +  H    H G +      + C+ C KAF     L+ HQ V
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHT-H-GPR-----VHVCAECGKAFVESSKLKRHQLV 56

Query: 594 HTGQKTHLCTM--CPASYATIGGLRSHIKI 621
           HTG+K   CT   C   ++    LR+H++I
Sbjct: 57  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRI 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 33/170 (19%), Positives = 55/170 (32%), Gaps = 56/170 (32%)

Query: 185 KSYKCSL--CPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
           ++  C    C K F   +A+  H + H G + H+C  C   F     L  H  V H G  
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-HTG-- 59

Query: 243 RPQESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKC--DDCFQCF 300
                                                         KPF+C  + C + F
Sbjct: 60  ---------------------------------------------EKPFQCTFEGCGKRF 74

Query: 301 LSKILLNQHKKQMHFNKGGFTC--NSCGLIFSEKKYLRNHMISHSTQKPF 348
                L  H + +H     + C  + C   F++   L++H+++H+  K  
Sbjct: 75  SLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 78.2 bits (194), Expect = 8e-18
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 6/91 (6%)

Query: 127 CNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKS 186
           C +CG+ F +K +L  HM  H+  KP+ C  C         ++KH RI H  +     + 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSDE-----RP 64

Query: 187 YKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           +KC +CP A  + + L  H   HTG      
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 70.5 bits (174), Expect = 3e-15
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 512 CNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKS 571
           C  CGK F  K KL+ H+  H+  +P+ C  C         +  H R +H  +     + 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDE-----RP 64

Query: 572 YKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           +KC +CP A      L  H   HTG      
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 70.5 bits (174), Expect = 4e-15
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
             C  CG  FS K  L+ HM  H+  KP+ C  C       + +  H R+H + +  + +
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH-SDE--RPF 65

Query: 380 KCSLCPRVFTHLAALEDHQFVHTGQK 405
           KC +CP    + + L  H   HTG  
Sbjct: 66  KCQICPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 69.0 bits (170), Expect = 1e-14
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 146 SHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
           S  +  P  C +C K F RK ++  H R  H G K      YKC  C  A    ++L  H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVK-----PYKCKTCDYAAADSSSLNKH 55

Query: 206 QYVHTGQKSHMCNLCSARFTCKGALLGH 233
             +H+ ++   C +C         L  H
Sbjct: 56  LRIHSDERPFKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.1 bits (152), Expect = 3e-12
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
            P KC+ C +CF  K  L  H +  H     + C +C    ++   L  H+  HS ++PF
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 349 SCSLCGKRFKRENGVINHQRLHQTKKVYK 377
            C +C    +  + +  H R H       
Sbjct: 66  KCQICPYASRNSSQLTVHLRSHTGDSGPS 94

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 60.9 bits (149), Expect = 8e-12
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFV 400
           S  +  P  C +CGK F R++ +  H R H      K YKC  C       ++L  H  +
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV---KPYKCKTCDYAAADSSSLNKHLRI 58

Query: 401 HTGQKTRLCTMCPAIFASIGGLRSHMKI 428
           H+ ++   C +CP    +   L  H++ 
Sbjct: 59  HSDERPFKCQICPYASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 54.7 bits (133), Expect = 1e-09
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           KP+KC  CD        LNKH  +H+ E    C +C    R   +L  H+ SH+ +   S
Sbjct: 35  KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS 94

Query: 155 C 155
            
Sbjct: 95  S 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 53.2 bits (129), Expect = 4e-09
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
             ++ P  C VC K F RK  +  H R  H G K      YKC  C  A     +L  H 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVK-----PYKCKTCDYAAADSSSLNKHL 56

Query: 592 FVHTGQKTHLCTMCPASYATIGGLRSHIKI 621
            +H+ ++   C +CP +      L  H++ 
Sbjct: 57  RIHSDERPFKCQICPYASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.0 bits (113), Expect = 6e-07
 Identities = 19/61 (31%), Positives = 26/61 (42%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           KP+KC  CD        LNKH  +H D+  F C  C     +  +L  H+  H+     S
Sbjct: 35  KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS 94

Query: 540 C 540
            
Sbjct: 95  S 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.2 bits (90), Expect = 8e-04
 Identities = 26/128 (20%), Positives = 35/128 (27%), Gaps = 47/128 (36%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ 629
             +KC +C K F+    L+ H   HTG K + C  C  + A    L  H++I H      
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSD---- 61

Query: 630 QSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKIL 689
                                                      +PFKC  C         
Sbjct: 62  ------------------------------------------ERPFKCQICPYASRNSSQ 79

Query: 690 LNKHKLLH 697
           L  H   H
Sbjct: 80  LTVHLRSH 87

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 78.3 bits (194), Expect = 9e-18
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKC 189
           CG++F  K +   HM  H   +P+ C +C K+FK KH +  H +I H G      K Y+C
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-HTGI-----KPYEC 68

Query: 190 SLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGAL 230
           ++C K F    +   H++V +  KS+         T     
Sbjct: 69  NICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.8 bits (172), Expect = 9e-15
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 10/108 (9%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           K + C  C + F  K   ++H  +H       C +CG+ F+ K  L+ HM  H+  KP+ 
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67

Query: 155 CPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAAL 202
           C IC K+F  +   S H  +          KSY+ +   +  T  +  
Sbjct: 68  CNICAKRFMWRD--SFHRHV-TSCT-----KSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 68.2 bits (168), Expect = 3e-14
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 515 CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKC 574
           CGK+F HK +  RH+ +H   RP+ C VC K+FK K  + GH + +H G      K Y+C
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGI-----KPYEC 68

Query: 575 SLCPKAFTYLGALEDHQFVHTGQKTHLCTMC 605
           ++C K F +  +   H+ V +  K++     
Sbjct: 69  NICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 66.3 bits (163), Expect = 1e-13
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 325 CGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLC 384
           CG  F+ K     HM  H   +P+ C +CGK+FK ++ ++ H ++H      K Y+C++C
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI---KPYECNIC 71

Query: 385 PRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRS 424
            + F    +   H+ V +  K+              G  S
Sbjct: 72  AKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.9 bits (149), Expect = 1e-11
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 146 SHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
             S +K + C  C K F  K +  +H  + H G +      Y C +C K F     L  H
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSM-HLGLR-----PYGCGVCGKKFKMKHHLVGH 56

Query: 206 QYVHTGQKSHMCNLCSARFTCKGALLGHI 234
             +HTG K + CN+C+ RF  + +   H+
Sbjct: 57  MKIHTGIKPYECNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 59.4 bits (145), Expect = 4e-11
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           K + C  C + F  K   ++H  +H     + C  CGK F  K+ L  H+ IH+  +P+ 
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67

Query: 540 CPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGAL 587
           C +C K+F  +     H   V         KSY+ +   +  T     
Sbjct: 68  CNICAKRFMWRDSF--HRH-VTSCT-----KSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.7 bits (107), Expect = 5e-06
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 34/106 (32%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
           +P+ C                               CG  F  K +L  HM  H+  KP+
Sbjct: 36  RPYGCGV-----------------------------CGKKFKMKHHLVGHMKIHTGIKPY 66

Query: 349 SCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
            C++C KRF   +    H+ +       KSY+ +   +  T  +  
Sbjct: 67  ECNICAKRFMWRDSF--HRHVTSCT---KSYEAAKAEQNTTEASGP 107

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 76.4 bits (189), Expect = 3e-17
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
             C  CG IF +  +L  H +SHS +KP+SC +CG RFKR++ +  H R H    V K Y
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKPY 66

Query: 380 KCSLCPRVFTHLAALEDH-QFVHTGQKT 406
            C  C + F+    L  H + VH+G  +
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 75.6 bits (187), Expect = 5e-17
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYK 185
            C +CG+ FR  + L  H +SHS EKP+SCP+C  +FKRK  +S H R  H G      K
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSV---GK 64

Query: 186 SYKCSLCPKAFTHLAALEDH-QYVHTGQKS 214
            Y C  C K F+    L  H + VH+G  S
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 5e-15
 Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
            +C  CGK F   Y L RH + HS  +P+SCPVC  +FKRK  ++ H R  H G      
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSV---G 63

Query: 570 KSYKCSLCPKAFTYLGALEDH-QFVHTGQKT 599
           K Y C  C K F+    L  H + VH+G  +
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.7 bits (164), Expect = 8e-14
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 8/98 (8%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQ 206
            S     +C IC K F+  + +++H    H G+K      Y C +C   F     +  H 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS-HSGEK-----PYSCPVCGLRFKRKDRMSYHV 55

Query: 207 YVHTG--QKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
             H G   K ++C  C   F+    L GHIK +H G  
Sbjct: 56  RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVH 401
            S     +C +CGK F+    +  H+  H  +   K Y C +C   F     +  H   H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE---KPYSCPVCGLRFKRKDRMSYHVRSH 58

Query: 402 TGQKTR--LCTMCPAIFASIGGLRSHMKIVHHGLKT 435
            G   +  +C  C   F+    L  H+K VH G  +
Sbjct: 59  DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
            S +   +C +C K F+    +  H    H G+     K Y C +C   F     +  H 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKL-SHSGE-----KPYSCPVCGLRFKRKDRMSYHV 55

Query: 592 FVHTG--QKTHLCTMCPASYATIGGLRSHIKIVHHGLKT 628
             H G   K ++C  C   ++    L  HIK VH G  +
Sbjct: 56  RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 46.7 bits (112), Expect = 8e-07
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 46/130 (35%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRP 244
               C +C K F  +  L  H+  H+G+K + C +C  RF  K  +  H++  H+G    
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDG---- 60

Query: 245 QESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCFQCFLSKI 304
                                                    ++ KP+ C  C + F    
Sbjct: 61  -----------------------------------------SVGKPYICQSCGKGFSRPD 79

Query: 305 LLNQHKKQMH 314
            LN H KQ+H
Sbjct: 80  HLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 29/87 (33%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTE--KPF 153
           KP+ C                             CG  F++K R+  H+ SH     KP+
Sbjct: 34  KPYSCPV---------------------------CGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 154 SCPICKKQFKRKHEVSKHDRIVHQGKK 180
            C  C K F R   ++ H + VH G  
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 30/88 (34%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHS--TARP 537
           KP+ C                              CG  F  K ++  H+  H     +P
Sbjct: 34  KPYSCPV----------------------------CGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 538 FSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           + C  C K F R   + GH + VH G  
Sbjct: 66  YICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHKLLHT-EGHLTCNL--CGQTFRQKFRLLNHMISHSTE 150
           +PF C    C++ +     L  H   HT E    C+   C + F +  +L  H   H+  
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 151 KPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALEDHQYV 208
           KPF C  C+++F R   +  H R  H G+     K + C    C K F     L  H  +
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRT-HTGE-----KPFSCRWPSCQKKFARSDELVRHHNM 118

Query: 209 H 209
           H
Sbjct: 119 H 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 68.7 bits (169), Expect = 3e-14
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 320 FTCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKV 375
           F C    C   + +  +L+ H   H+ +KP+ C    C +RF R + +  HQR H   K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK- 65

Query: 376 YKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTM--CPAIFASIGGLRSHMKI 428
              ++C  C R F+    L+ H   HTG+K   C    C   FA    L  H  +
Sbjct: 66  --PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.5 bits (158), Expect = 9e-13
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTA 535
           +PF C    C++R+     L  H   H  +  + C++  C + F    +L+RH   H+  
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 536 RPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFV 593
           +PF C  C+++F R   +  H R  H G+     K + C    C K F     L  H  +
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTR-THTGE-----KPFSCRWPSCQKKFARSDELVRHHNM 118

Query: 594 H 594
           H
Sbjct: 119 H 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.1 bits (157), Expect = 1e-12
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 510 FSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKK 565
           F C Y  C K +     L+ H   H+  +P+ C    C+++F R   +  H R  H G K
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVK 65

Query: 566 LIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKI 621
                 ++C  C + F+    L+ H   HTG+K   C    C   +A    L  H  +
Sbjct: 66  -----PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 289 KPFKCD--DCFQCFLSKILLNQHKKQMHFNKGGFTCNS--CGLIFSEKKYLRNHMISHST 344
           +PF C    C + +     L  H +  H  +  + C+   C   FS    L+ H   H+ 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 345 QKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPRVFTHLAALEDHQFVH 401
            KPF C  C ++F R + +  H R H  +   K + C    C + F     L  H  +H
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHTGE---KPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 150 EKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALEDH 205
           ++PF C  P C K++ +   +  H R  H G+K      Y+C    C + F+    L+ H
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRK-HTGEK-----PYQCDFKDCERRFSRSDQLKRH 57

Query: 206 QYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
           Q  HTG K   C  C  +F+    L  H +  H G K
Sbjct: 58  QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEK 93

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 70.1 bits (173), Expect = 3e-15
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 6/85 (7%)

Query: 127 CNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKS 186
           C +CG++F++   L  H++ HS  +P+ C  C K+F +K ++ KH  I H G+     K 
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGE-----KP 57

Query: 187 YKCSLCPKAFTHLAALEDHQYVHTG 211
           +KC +C KAF+  + L  H   HTG
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 66.7 bits (164), Expect = 6e-14
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
           F C  CG  F     L  H++ HS  +P+ C  CGKRF +++ +  H  +H T +  K +
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH-TGE--KPH 58

Query: 380 KCSLCPRVFTHLAALEDHQFVHTG 403
           KC +C + F+  + L  H   HTG
Sbjct: 59  KCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.5 bits (161), Expect = 1e-13
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
           F C  CGK+F     L  H++IHS  RP+ C  C K+F +K D+  H   +H G+     
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGE----- 55

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTG 596
           K +KC +C KAF+    L  H   HTG
Sbjct: 56  KPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 291 FKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSC 350
           F C  C + F     L+ H   +H +   + C  CG  F +K  ++ H   H+ +KP  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 351 SLCGKRFKRENGVINHQRLH 370
            +CGK F + + +I H R H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 348 FSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTR 407
           F C +CGK FKR + +  H  +H   +    Y C  C + F   + ++ H F+HTG+K  
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTR---PYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58

Query: 408 LCTMCPAIFASIGGLRSHMKI 428
            C +C   F+    L +H + 
Sbjct: 59  KCQVCGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.9 bits (110), Expect = 1e-06
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 186 SYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGH 233
           S+ C +C K+F   + L  H  +H+  + + C  C  RF  K  +  H
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH 48

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 17/53 (32%), Positives = 23/53 (43%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIH 532
           +P+ C  C +RF  K  + KH  +H  +    C  CGK F     L  H   H
Sbjct: 28  RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.9 bits (167), Expect = 3e-14
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYK 185
            C +C + F +   L  H+ +H+ EKPF+C IC ++F R  E  +H  I           
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHILP----- 58

Query: 186 SYKCSLCPKAFT---HLAALEDHQYVHTGQK 213
                   +  +   HL           G++
Sbjct: 59  -ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSY 379
           F C  C   FS   +L  H+ +H+ +KPF+C +CG++F R +    H+ +          
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HI---LPI 59

Query: 380 KCSLCPRVFT---HLAALEDHQFVHTGQK 405
                  + +   HL           G++
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVY 569
           F C  C + F     L  HI  H+  +PF+C +C ++F R  +   H   +         
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHILP---- 58

Query: 570 KSYKCSLCPKAFTYLGALEDHQF---VHTGQK 598
                    +  +    LE+         G++
Sbjct: 59  --ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 151 KPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHT 210
           KPF C IC + F R   ++ H R  H G+     K + C +C + F      + H+ +  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRT-HTGE-----KPFACDICGRKFARSDERKRHRDIQH 55

Query: 211 GQKSHMCNLCSARFTCKGALLGHIK 235
                + +      +    L   + 
Sbjct: 56  -ILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 55.2 bits (134), Expect = 8e-10
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           KPF+C  C + F     L  H   H  +  F+C+ CG+ F    + +RH  I     P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60

Query: 540 CPVCKKQFKRKQDVAGHDRV--VHQGKK 565
               ++   +   +           G++
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 346 KPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
           KPF C +C + F R + +  H R H T +  K + C +C R F      + H+ +     
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH-TGE--KPFACDICGRKFARSDERKRHRDIQH-IL 57

Query: 406 TRLCTMCPAIFASIGGLRSHMK 427
             L      + +    L + + 
Sbjct: 58  PILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.7 bits (112), Expect = 7e-07
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMIS---HSTEK 151
           KPF CD C + F       +H+ +     +  +   +   + + L N +        E+
Sbjct: 30  KPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHE 239
           K ++C +C + F+    L  H   HTG+K   C++C  +F        H  + H 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 536 RPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHT 595
           +PF C +C + F R   +  H R  H G+     K + C +C + F      + H+ +  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIR-THTGE-----KPFACDICGRKFARSDERKRHRDIQH 55

Query: 596 GQKTHLCTMCPASYATIGGLRSHIK 620
                L        +    L + + 
Sbjct: 56  -ILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI 621
           K ++C +C + F+    L  H   HTG+K   C +C   +A     + H  I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKI 428
           K ++C +C R F+    L  H   HTG+K   C +C   FA     + H  I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 66.3 bits (163), Expect = 8e-14
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 320 FTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           + C    C   FS+   L  H+  H+ QKPF C +C + F R + +  H R H T +  K
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH-TGE--K 61

Query: 378 SYKCSLCPRVFTHLAALEDHQFVHTGQK 405
            + C +C R F      + H  +H  QK
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)

Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQY 207
           E+P++CP+  C ++F +   +++H RI H G+K      ++C +C + F+    L  H  
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIR 55

Query: 208 VHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
            HTG+K   C++C  +F        H K+ H   K
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTKI-HLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 64.4 bits (158), Expect = 4e-13
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 96  KPFKC--DDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKP 152
           +P+ C  + CD+ F     L +H  +HT +    C +C + F +   L  H+ +H+ EKP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 153 FSCPICKKQFKRKHEVSKHDRIVHQGKK 180
           F+C IC ++F R  E  +H +I H  +K
Sbjct: 63  FACDICGRKFARSDERKRHTKI-HLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 346 KPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTG 403
           +P++C +  C +RF +   +  H R+H  +K    ++C +C R F+    L  H   HTG
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQK---PFQCRICMRNFSRSDHLTTHIRTHTG 59

Query: 404 QKTRLCTMCPAIFASIGGLRSHMKI 428
           +K   C +C   FA     + H KI
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 56.3 bits (137), Expect = 3e-10
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 289 KPFKC--DDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQK 346
           +P+ C  + C + F     L +H + +H  +  F C  C   FS   +L  H+ +H+ +K
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 347 PFSCSLCGKRFKRENGVINHQRLH 370
           PF+C +CG++F R +    H ++H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.6 bits (135), Expect = 6e-10
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 480 KPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP 537
           +P+ C  + CD+RF     L +H  +H  +  F C  C + F     L  HI  H+  +P
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 538 FSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           F+C +C ++F R  +   H + +H  +K
Sbjct: 63  FACDICGRKFARSDERKRHTK-IHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFV 593
           RP++CPV  C ++F +   +  H R+ H G+K      ++C +C + F+    L  H   
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQK-----PFQCRICMRNFSRSDHLTTHIRT 56

Query: 594 HTGQKTHLCTMCPASYATIGGLRSHIKI 621
           HTG+K   C +C   +A     + H KI
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 49/130 (37%)

Query: 570 KSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
           + Y C +  C + F+  G+L  H  +HTGQK   C +C  +++    L +HI+  H G  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTG-- 59

Query: 628 TQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTK 687
                                                        KPF CD C ++F   
Sbjct: 60  --------------------------------------------EKPFACDICGRKFARS 75

Query: 688 ILLNKHKLLH 697
               +H  +H
Sbjct: 76  DERKRHTKIH 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
             +   +H+ EKP++C  C K F++K  +  H +  +    + V  ++ CS C K FT  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPNF-VPAAFVCSKCGKTFTRR 60

Query: 200 AALEDHQYVHTGQKSHMCNLC 220
             +  H     G         
Sbjct: 61  NTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQT-KKVYKSYKCSLCPRVFTHLAA 393
             +   +H+ +KP++CS C K F+++  +  H + +     V  ++ CS C + FT    
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 394 LEDHQFVHTGQKTRLCTMC 412
           +  H     G         
Sbjct: 63  MARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 525 LRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYL 584
                  H+  +P++C  C K F++KQ +  H +  +      V  ++ CS C K FT  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPN-FVPAAFVCSKCGKTFTRR 60

Query: 585 GALEDHQFVHTGQKTHLCTMC 605
             +  H     G         
Sbjct: 61  NTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGHL-----TCNLCGQTFRQKFRLLNHMISHSTE 150
           KP+ C  CD+ F  K LL+ H   + + +       C+ CG+TF ++  +  H  + +  
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 151 KPFSCPICKKQF 162
                       
Sbjct: 74  DGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 11/89 (12%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTE----KPFSCPICKKQFKRKHE 167
                  HT E    C+ C +TFRQK  L  H   +         F C  C K F R++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 168 VSKHDRIVHQGKKYNVYKSYKCSLCPKAF 196
           +++H      G         +      + 
Sbjct: 63  MARHADN-CAGPD-----GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY----FSCNYCGKTFLHKYKLRRHIVIHSTA 535
           KP+ C  CD+ F  K LL+ H   + D ++    F C+ CGKTF  +  + RH    +  
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 536 RPFSCPVCKKQF 547
                       
Sbjct: 74  DGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 10/76 (13%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIH----STARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           ++C++C KTF  K  L  H   +         F C  C K F R+  +A H      G  
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN-CAGPD 74

Query: 566 LIVYKSYKCSLCPKAF 581
                  +      + 
Sbjct: 75  -----GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGG---FTCNSCGLIFSEKKYLRNHMISHSTQ 345
           KP+ C  C + F  K LL+ H K+ H        F C+ CG  F+ +  +  H  + +  
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 346 KPFSCSLCGKRF 357
                   G   
Sbjct: 74  DGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 10/68 (14%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTG----QKSHMCNLCSARFT 225
              R  H G+K      Y CS C K F     L+ H   +        + +C+ C   FT
Sbjct: 5   SSGRT-HTGEK-----PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58

Query: 226 CKGALLGH 233
            +  +  H
Sbjct: 59  RRNTMARH 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 18/128 (14%), Positives = 30/128 (23%), Gaps = 43/128 (33%)

Query: 585 GALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVD 644
           G+       HTG+K + C+ C  ++     L  H K  +H                    
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPNFVP-------------- 45

Query: 645 EINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFS 704
                                         F C  C + F  +  + +H       D   
Sbjct: 46  ----------------------------AAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77

Query: 705 CNYCGKTF 712
               G + 
Sbjct: 78  GENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 18/126 (14%), Positives = 26/126 (20%), Gaps = 43/126 (34%)

Query: 394 LEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEI 453
                  HTG+K   C+ C   F     L  H K  +H                      
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPNFVP---------------- 45

Query: 454 NKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCN 513
                                       F C  C + F  +  + +H       D     
Sbjct: 46  --------------------------AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE 79

Query: 514 YCGKTF 519
             G + 
Sbjct: 80  NSGPSS 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.3 bits (155), Expect = 6e-13
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
             +   +HS +KP+ C +C  RF +   +  H       +    + C  C  V    + L
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK-HTENVAKFHCPHCDTVIARKSDL 61

Query: 395 EDHQ-FVHTGQK 405
             H    H+   
Sbjct: 62  GVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.5 bits (153), Expect = 1e-12
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
             +   +HS EKP+ C IC  +F +   +  H       +       + C  C       
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ-KHTEN---VAKFHCPHCDTVIARK 58

Query: 200 AALEDHQ-YVHTGQK 213
           + L  H    H+   
Sbjct: 59  SDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.1 bits (139), Expect = 1e-10
 Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 5/76 (6%)

Query: 524 KLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTY 583
                   HS  +P+ C +C  +F +   +  H       +       + C  C      
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTEN---VAKFHCPHCDTVIAR 57

Query: 584 LGALEDHQ-FVHTGQK 598
              L  H    H+   
Sbjct: 58  KSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHS--TARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           + C  C   F     ++ HI+         F CP C     RK D+  H R  H    
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTG--QKSHMCNLCSARFTCKGALLGHIKVLHEGYK 242
           K Y+C +C   FT    ++ H             C  C      K  L  H++  H    
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGHL---TCNLCGQTFRQKFRLLNHM-ISHSTEK 151
           KP++C  C   F     +  H L     ++    C  C     +K  L  H+   HS   
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

Query: 152 PFS 154
           P S
Sbjct: 74  PSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.4 bits (119), Expect = 6e-08
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY--FSCNYCGKTFLHKYKLRRHI-VIHSTAR 536
           KP++C  C  RF     +  H L    ++   F C +C      K  L  H+   HS + 
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

Query: 537 PFS 539
           P S
Sbjct: 74  PSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.4 bits (119), Expect = 7e-08
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTG--QKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
           K Y+C +C   FT  G ++ H             C  C    A    L  H++  H    
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTR--LCTMCPAIFASIGGLR 423
             R H + +  K Y+C +C   FT    ++ H      +      C  C  + A    L 
Sbjct: 6   SGRTH-SGE--KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 424 SHMKIVHHGLK 434
            H++  H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGG--FTCNSCGLIFSEKKYLRNHM-ISHSTQ 345
           KP++C  C   F     +  H  Q    +    F C  C  + + K  L  H+   HS  
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQ-KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

Query: 346 KPFS 349
            P S
Sbjct: 73  GPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY--FSCNYCGKTF 712
           KP++C  C  RF     +  H L    ++   F C +C    
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI 55

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
                  HS EKP+ C  C K F R   + +H R+ H G+K      YKC  C KAF+  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGEK-----PYKCLECGKAFSQN 55

Query: 200 AALEDHQYVHTGQKSH 215
           + L +HQ +HT   S 
Sbjct: 56  SGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 57.9 bits (141), Expect = 5e-11
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
                  HS +KP+ C  CGK F R + ++ HQR+H  +   K YKC  C + F+  + L
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE---KPYKCLECGKAFSQNSGL 58

Query: 395 EDHQFVHTGQK 405
            +HQ +HT   
Sbjct: 59  INHQRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 525 LRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYL 584
                 IHS  +P+ C  C K F R   +  H RV H G+K      YKC  C KAF+  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGEK-----PYKCLECGKAFSQN 55

Query: 585 GALEDHQFVHTGQKTH 600
             L +HQ +HT   + 
Sbjct: 56  SGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVY 376
           + C  CG  FS    L  H   H+ +KP+ C  CGK F + +G+INHQR+H +    
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
            +    +H+ E    C  CG+ F +   L+ H   H+ EKP+ C  C K F +   +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 172 DRIVHQGKK 180
            RI H    
Sbjct: 62  QRI-HTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 169 SKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKG 228
           S    I H G+K      Y C  C KAF+  + L  HQ VHTG+K + C  C   F+   
Sbjct: 3   SGSSGI-HSGEK-----PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNS 56

Query: 229 ALLGH 233
            L+ H
Sbjct: 57  GLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
           KP+ C +C + F    +L +H+ +HT E    C  CG+ F Q   L+NH   H++    
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
            +    +H  +  + C  CGK F     L +H  +H+  +P+ C  C K F +   +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 557 DRVVHQGKK 565
            R +H    
Sbjct: 62  QR-IHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 362 GVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGG 421
           G      +H  +K    Y C  C + F+  + L  HQ VHTG+K   C  C   F+   G
Sbjct: 1   GSSGSSGIHSGEK---PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSG 57

Query: 422 LRSHMKIVHHGLK 434
           L +H +I H    
Sbjct: 58  LINHQRI-HTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPF 538
           KP+ C +C + F    +L +H+ +H  +  + C  CGK F     L  H  IH++    
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
           K Y C  C KAF+    L  HQ VHTG+K + C  C  +++   GL +H +I H    
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI-HTSGP 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 136 QKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKA 195
                          + + C  C K F    ++SKH R  H G+     K YKC  C KA
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE-----KPYKCDECGKA 55

Query: 196 FTHLAALEDHQYVHTGQK 213
           F   + L  H  VHTG  
Sbjct: 56  FIQRSHLIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
                     ++ + C  CGK F   + +  H+R H  +   K YKC  C + F   + L
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE---KPYKCDECGKAFIQRSHL 62

Query: 395 EDHQFVHTGQK 405
             H  VHTG  
Sbjct: 63  IGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.8 bits (128), Expect = 3e-09
 Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 521 HKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKA 580
                 R        R + C  C K F    D++ H R  H G+     K YKC  C KA
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE-----KPYKCDECGKA 55

Query: 581 FTYLGALEDHQFVHTGQK 598
           F     L  H  VHTG  
Sbjct: 56  FIQRSHLIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.0 bits (118), Expect = 7e-08
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           + C+ CG  FS    L  H  +H+ +KP+ C  CGK F + + +I H R+H       
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 169 SKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKG 228
            + +    + ++      YKC  C K+F+H + L  H+  HTG+K + C+ C   F  + 
Sbjct: 7   GRSEWQ-QRERR-----RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 229 ALLGH 233
            L+GH
Sbjct: 61  HLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
             + +          C+ CG++F     L  H  +H+ EKP+ C  C K F ++  +  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 172 DRIVHQGKK 180
            R+ H G  
Sbjct: 66  HRV-HTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.1 bits (108), Expect = 2e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
           + +KCD+C + F     L+KH+  HT E    C+ CG+ F Q+  L+ H   H+   P 
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
             + +    ++  + C+ CGK+F H   L +H   H+  +P+ C  C K F ++  + GH
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 557 DRVVHQGKK 565
            R VH G  
Sbjct: 66  HR-VHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.6 bits (91), Expect = 4e-04
 Identities = 18/59 (30%), Positives = 32/59 (54%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPF 538
           + +KCD+C + F     L+KH+  H  +  + C+ CGK F+ +  L  H  +H+ + P 
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 9e-04
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC 605
           + YKC  C K+F++   L  H+  HTG+K + C  C
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC 52

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 2e-11
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 334 YLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAA 393
           +  +H     + KP+ C  C   F+ +  + +H+ +H  +   K Y+C++C   F   A 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE---KPYRCNICGAQFNRPAN 60

Query: 394 LEDHQFVHTGQK 405
           L+ H  +H+G+K
Sbjct: 61  LKTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 52.8 bits (128), Expect = 3e-09
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
            + H  +   +    C+ C  +FR K  L +H   H+ EKP+ C IC  QF R   +  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 172 DRIVHQGKK 180
            RI H G+K
Sbjct: 65  TRI-HSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPF 153
           KP+KCD C   F  K  L  HK +HT E    CN+CG  F +   L  H   HS EKP+
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.9 bits (123), Expect = 2e-08
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGA 229
            H  +     K      YKC  C  +F +   L  H+ VHTG+K + CN+C A+F     
Sbjct: 7   HHSHM-THSDK-----PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 230 LLGH 233
           L  H
Sbjct: 61  LKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 306 LNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVIN 365
            + H   M  +   + C+ C   F  K  L +H   H+ +KP+ C++CG +F R   +  
Sbjct: 5   HHHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 366 HQRLH 370
           H R+H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
            + H  +      + C+ C  +F +K  L  H  +H+  +P+ C +C  QF R  ++  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 557 DRVVHQGKK 565
            R +H G+K
Sbjct: 65  TR-IHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.2 bits (103), Expect = 8e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK 627
           K YKC  C  +F Y G L  H+ VHTG+K + C +C A +     L++H   +H G K
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPF 538
           KP+KCD C   F  K  L  HK +H  +  + CN CG  F     L+ H  IHS  +P+
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
           KP+KCD C   F  K  L  HK  +H  +  + CN CG  F+    L+ H   HS +KP+
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 12/73 (16%), Positives = 22/73 (30%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVH 401
            S      C +CG   +++  +  HQR H        + C  C + F    ++  H+   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 402 TGQKTRLCTMCPA 414
                        
Sbjct: 62  HPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 125 LTCNLCGQTFRQKFRLLNHMISHST---EKPFSCPICKKQFKRKHEVSKHDRIVHQGKKY 181
           L C +CG T RQK  L  H   H+       F C  C K+F++   V+ H    H     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 54.7 bits (132), Expect = 8e-10
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 4/69 (5%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGH----LTCNLCGQTFRQKFRLLNHMISHSTEK 151
              +C+ C      K  LN H+  H E        C  CG+ F +   +  H        
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 152 PFSCPICKK 160
             +      
Sbjct: 66  LLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY---FSCNYCGKTFLHKYKLRRHIVIHSTAR 536
              +C+ C      K  LN H+  H +      F C +CGK F     +  H      A 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 537 PFSCPVCKK 545
             +      
Sbjct: 66  LLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 4/71 (5%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHT---GQKSHMCNLCSARFTCKGALLGHIKVLHEGY 241
              +C +C       A+L  HQ  H          C  C  RF    ++  H    H   
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 242 K-RPQESCQSS 251
              PQES   S
Sbjct: 66  LLAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 5/73 (6%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGG---FTCNSCGLIFSEKKYLRNHM-ISHST 344
              +C+ C      K  LN H++  H        F C  CG  F +   +  H   SH  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 345 QKPFSCSLCGKRF 357
                    G   
Sbjct: 65  LLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 3/76 (3%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
            S +    C +C    ++K  +  H R  H          + C  C K F    ++  H+
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRK-HAETV--AALRFPCEFCGKRFEKPDSVAAHR 58

Query: 592 FVHTGQKTHLCTMCPA 607
                           
Sbjct: 59  SKSHPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 13/72 (18%), Positives = 20/72 (27%), Gaps = 4/72 (5%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHT---GQKTHLCTMCPASYATIGGLRSHIKIVHHGL 626
              +C +C        +L  HQ  H          C  C   +     + +H     H  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK-SHPA 64

Query: 627 KTQQSCQSSHES 638
                 +SS  S
Sbjct: 65  LLLAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%)

Query: 673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY---FSCNYCGKTF 712
              +C+ C      K  LN H+  H +      F C +CGK F
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRF 48

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 9/82 (10%)

Query: 147 HSTEKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS--LCPKAFTHLAAL 202
            S      C    C + F  +  ++ H +  H  +K     S+ C    C K+F     L
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-----SFSCPEPACGKSFNFKKHL 56

Query: 203 EDHQYVHTGQKSHMCNLCSARF 224
           ++H  +H+  + ++C       
Sbjct: 57  KEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 289 KPFKCD--DCFQCFLSKILLNQHKKQMHFNKGGFTCN--SCGLIFSEKKYLRNHMISHST 344
               CD   C + F ++  LN HKK  H ++  F+C   +CG  F+ KK+L+ HM  HS 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 345 QKPFSCSLCGKRF 357
            + + C   G   
Sbjct: 66  TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHK-LLHT-EGHLTCN--LCGQTFRQKFRLLNHMISHST 149
               CD   C + F  +  LN HK   H  +   +C    CG++F  K  L  HM  HS 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 150 EKPFSCPICKKQF 162
            + + C       
Sbjct: 66  TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 320 FTCNS--CGLIFSEKKYLRNHM-ISHSTQKPFSCS--LCGKRFKRENGVINHQRLHQTKK 374
             C+   CG IFS ++YL +H    H  QK FSC    CGK F  +  +  H +LH    
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT- 66

Query: 375 VYKSYKCSLCPRVF 388
             + Y C       
Sbjct: 67  --RDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 532 HSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCS--LCPKAFTYLGAL 587
            S +    C    C + F  +Q +  H +  H  +K     S+ C    C K+F +   L
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-----SFSCPEPACGKSFNFKKHL 56

Query: 588 EDHQFVHTGQKTHLCTMC 605
           ++H  +H+  + ++C   
Sbjct: 57  KEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 5e-08
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHK-LLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHST 534
               CD   C + F  +  LN HK   H  +  FSC    CGK+F  K  L+ H+ +HS 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 535 ARPFSCPVCKKQF 547
            R + C       
Sbjct: 66  TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 342 HSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCS--LCPRVFTHLAALEDH 397
            S      C    CG+ F     + +H++     +  KS+ C    C + F     L++H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ--KSFSCPEPACGKSFNFKKHLKEH 59

Query: 398 QFVHTGQKTRLCTMC 412
             +H+  +  +C   
Sbjct: 60  MKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 11/77 (14%)

Query: 510 FSCNY--CGKTFLHKYKLRRHI-VIHSTARPFSCP--VCKKQFKRKQDVAGHDRVVHQGK 564
             C++  CG+ F ++  L  H    H   + FSCP   C K F  K+ +  H ++ H   
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL-HSDT 66

Query: 565 KLIVYKSYKCSLCPKAF 581
           +      Y C     + 
Sbjct: 67  R-----DYICEFSGPSS 78

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 57.9 bits (141), Expect = 5e-11
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 146 SHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
           S S+  P  C  C      K  +  H+RI H        + +KC+ C       + L  H
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERI-HCTD-----RPFKCNYCSFDTKQPSNLSKH 56

Query: 206 QYVHTGQKSHMC 217
                G  S   
Sbjct: 57  MKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFV 400
           S S+  P  CS C      +  +  H+R+H T    + +KC+ C       + L  H   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTD---RPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 401 HTGQKT 406
             G  +
Sbjct: 60  FHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRP 244
              KCS C  + +  AAL  H+ +H   +   CN CS        L  H+K    G    
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDMSG 66

Query: 245 QES 247
             S
Sbjct: 67  PSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
             C+ C    S K  LR H   H T +PF C+ C    K+ + +  H +  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
            P KC +C     +K  L  H+ +H  +    CN C    +Q   L  HM     +    
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67

Query: 155 CP 156
             
Sbjct: 68  SS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 7e-08
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 127 CNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
           C+ C  +   K  L  H   H T++PF C  C    K+   +SKH +    G  
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHF-DKDYFSCNYCGKTFLHKYKLRRHIVIH 532
            P KC +C     +K  L  H+ +H  D+ +  CNYC         L +H+   
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPF-KCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ 629
              KCS C  + +   AL  H+ +H   +   C  C         L  H+K   HG  + 
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDMSG 66

Query: 630 QSC 632
            S 
Sbjct: 67  PSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 6/68 (8%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQ 591
            S+  P  C  C      K  +  H+R +H        + +KC+ C         L  H 
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHER-IHCTD-----RPFKCNYCSFDTKQPSNLSKHM 57

Query: 592 FVHTGQKT 599
               G  +
Sbjct: 58  KKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.3 bits (111), Expect = 7e-07
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
             C+ C  +   K  LR H  IH T RPF C  C    K+  +++ H +    G  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQ 436
              KCS C    +  AAL  H+ +H   +   C  C         L  HMK   HG  + 
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDMSG 66

Query: 437 QSC 439
            S 
Sbjct: 67  PSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
            P KC +C     SK  L  H++ +H     F CN C     +   L  HM         
Sbjct: 8   HPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66

Query: 349 SCS 351
             S
Sbjct: 67  PSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.5 bits (88), Expect = 8e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 673 KPFKCDDCDQRFLTKILLNKHKLLHF-DKDYFSCNYCGKTF 712
            P KC +C     +K  L  H+ +H  D+ +  CNYC    
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPF-KCNYCSFDT 47

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 8/83 (9%)

Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSY 187
           C + + +   L  H+ +H+ EKP+ C    C  +F R  E+++H R  H G      K +
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTG-----AKPF 76

Query: 188 KCSLCPKAFTHLAALEDHQYVHT 210
           +C +C ++F+    L  H   H 
Sbjct: 77  QCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 325 CGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           C  ++++  +L+ H+ +H+ +KP+ C+   C  RF R + +  H R H T    K ++C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH-TG--AKPFQCG 79

Query: 383 LCPRVFTHLAALEDHQFVHT 402
           +C R F+    L  H   H 
Sbjct: 80  VCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 52.6 bits (127), Expect = 7e-09
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 514 YCGKTFLHKYKLRRHIVIHSTARPFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKS 571
            C K +     L+ H+  H+  +P+ C    C  +F R  ++  H R  H G      K 
Sbjct: 22  GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTG-----AKP 75

Query: 572 YKCSLCPKAFTYLGALEDHQFVHT 595
           ++C +C ++F+    L  H   H 
Sbjct: 76  FQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 96  KPFKCD--DCDQCFLTKILLNKHKLLHT-EGHLTCNL--CGQTFRQKFRLLNHMISHSTE 150
           +   CD   C + +     L  H   HT E    C    C   F +   L  H   H+  
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73

Query: 151 KPFSCPICKKQFKRKHEVSKHDRI 174
           KPF C +C + F R   ++ H + 
Sbjct: 74  KPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 150 EKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALEDH 205
            +   C    C K + +   +  H R  H G+K      YKC+   C   F     L  H
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEK-----PYKCTWEGCDWRFARSDELTRH 66

Query: 206 QYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
              HTG K   C +C+  F+    L  H+K 
Sbjct: 67  YRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 480 KPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTA 535
           +   CD   C + +     L  H   H  +  + C +  C   F    +L RH   H+ A
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73

Query: 536 RPFSCPVCKKQFKRKQDVAGHDRV 559
           +PF C VC + F R   +A H + 
Sbjct: 74  KPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 26/102 (25%), Positives = 34/102 (33%), Gaps = 9/102 (8%)

Query: 329 FSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPR 386
                        H    P     C K + + + +  H R H  +K    YKC+   C  
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEK---PYKCTWEGCDW 55

Query: 387 VFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKI 428
            F     L  H   HTG K   C +C   F+    L  HMK 
Sbjct: 56  RFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 536 RPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQ 591
           R   C    C K + +   +  H R  H G+K      YKC+   C   F     L  H 
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEK-----PYKCTWEGCDWRFARSDELTRHY 67

Query: 592 FVHTGQKTHLCTMCPASYATIGGLRSHIKI 621
             HTG K   C +C  S++    L  H+K 
Sbjct: 68  RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 320 FTCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQ 371
           + C    C   F+    L  H   H+  KPF C +C + F R + +  H + HQ
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNV 183
               CG+T+ +   L  H+ +H+ EKP+ C    C  +F R  E+++H R  H G     
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTG----- 62

Query: 184 YKSYKCSLCPKAFTHLAALEDHQYVH 209
           ++ ++C  C +AF+    L  H   H
Sbjct: 63  HRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYK 377
                CG  +++  +L+ H+ +H+ +KP+ C    CG +F R + +  H R H T   ++
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH-TG--HR 64

Query: 378 SYKCSLCPRVFTHLAALEDHQFVH 401
            ++C  C R F+    L  H   H
Sbjct: 65  PFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 22/92 (23%), Positives = 30/92 (32%), Gaps = 8/92 (8%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL--CPKAFTHLAALED 204
            +         C K + +   +  H R  H G+K      Y C    C   F     L  
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEK-----PYHCDWDGCGWKFARSDELTR 55

Query: 205 HQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
           H   HTG +   C  C   F+    L  H+K 
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHT-EGHLTCNL--CGQTFRQKFRLLNHMISHSTEKP 152
                  C + +     L  H   HT E    C+   CG  F +   L  H   H+  +P
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65

Query: 153 FSCPICKKQFKRKHEVSKHDRI 174
           F C  C + F R   ++ H + 
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.8 bits (120), Expect = 6e-08
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARP 537
                  C + +     L  H   H  +  + C++  CG  F    +L RH   H+  RP
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65

Query: 538 FSCPVCKKQFKRKQDVAGHDRV 559
           F C  C + F R   +A H + 
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.4 bits (119), Expect = 7e-08
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLI 567
                CGKT+     L+ H+  H+  +P+ C    C  +F R  ++  H R  H G    
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTG---- 62

Query: 568 VYKSYKCSLCPKAFTYLGALEDHQFVH 594
            ++ ++C  C +AF+    L  H   H
Sbjct: 63  -HRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.5 bits (114), Expect = 4e-07
 Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL--CPRVFTHLAALEDHQF 399
            +       + CGK + + + +  H R H  +K    Y C    C   F     L  H  
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEK---PYHCDWDGCGWKFARSDELTRHYR 58

Query: 400 VHTGQKTRLCTMCPAIFASIGGLRSHMKI 428
            HTG +   C  C   F+    L  HMK 
Sbjct: 59  KHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCN--SCGLIFSEKKYLRNHMISHSTQK 346
                  C + +     L  H +  H  +  + C+   CG  F+    L  H   H+  +
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64

Query: 347 PFSCSLCGKRFKRENGVINHQRLH 370
           PF C  C + F R + +  H + H
Sbjct: 65  PFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 8/92 (8%)

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALED 589
            +         C K + +   +  H R  H G+K      Y C    C   F     L  
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEK-----PYHCDWDGCGWKFARSDELTR 55

Query: 590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKI 621
           H   HTG +   C  C  +++    L  H+K 
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVI--HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQ 562
           + C  C + + H     RH V       + + CP C K+F RK ++  H +++H+
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 6/66 (9%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIV-HQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
              E  + C +C + +       +H      +  K      Y C  C K FT    +  H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-----YPCPFCFKEFTRKDNMTAH 59

Query: 206 QYVHTG 211
             +   
Sbjct: 60  VKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 126 TCNLCGQTFRQKFRLLNHM--ISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQ 177
            C +C + +        H         K + CP C K+F RK  ++ H +I+H+
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 320 FTCNSCGLIFSEKKYLRNHM--ISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           + C  C  +++       H         K + C  C K F R++ +  H ++ 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQ--YVHTGQKSHMCNLCSARFTCKGALLGHIKVLHE 239
            +Y+C +C + +TH++    H         K + C  C   FT K  +  H+K++H+
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVH 401
              +  + C +C + +   +    H      + V K Y C  C + FT    +  H  + 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV-KVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 402 TG 403
             
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 4/66 (6%)

Query: 531 IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDH 590
                  + C VC + +    +   H    H+       K Y C  C K FT    +  H
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV----KVYPCPFCFKEFTRKDNMTAH 59

Query: 591 QFVHTG 596
             +   
Sbjct: 60  VKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 377 KSYKCSLCPRVFTHLAALEDHQ--FVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGL 433
            +Y+C +C RV+TH++    H         K   C  C   F     + +H+KI  H +
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI-IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQ--FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL 626
            +Y+C +C + +T++     H         K + C  C   +     + +H+KI  H +
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI-IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 480 KPFKCDDCDQRFLTKILLNKHK--LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIH 532
             ++C  C + +       +H       +   + C +C K F  K  +  H+ I 
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.1 bits (142), Expect = 5e-09
 Identities = 102/674 (15%), Positives = 198/674 (29%), Gaps = 179/674 (26%)

Query: 20  LVEVVLQVFVGVVDAQ-LLETTNEKLNERKILVWKKISGKLSHETEART--HKLNEKEES 76
           ++ V    FV   D + + +     L++ +I     I       +        L  K+E 
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEI---DHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 77  TTKKKVNTHGASKENVA-LNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFR 135
             +K V      + N   L  P K +      +T++ + +   L+ +         Q F 
Sbjct: 78  MVQKFVEE--VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--------QVFA 127

Query: 136 QKFRLLNHMISHSTEKPFSCPICKKQFKRK-HEVSKHDRI-VH----QGKKY---NVYKS 186
           +           S  +P+       + ++   E+     + +      GK +   +V  S
Sbjct: 128 KYNV--------SRLQPY------LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 187 YK--CSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKRP 244
           YK  C +  K F          +++       CN           +L  ++ L   Y+  
Sbjct: 174 YKVQCKMDFKIF----------WLNLKN----CN-------SPETVLEMLQKLL--YQID 210

Query: 245 QESCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALN--------KPFKCDDC 296
                 S  S    +  I+    E   + K KP+E+    + L           F     
Sbjct: 211 PNWTSRSDHSSNIKL-RIHSIQAELRRLLKSKPYENC--LLVLLNVQNAKAWNAFN---- 263

Query: 297 FQCFLSKILL---------------NQHKKQMHFNKGGFTCNSCGLIFSEKKYL--RNHM 339
             C   KILL                 H    H +    T +    +    KYL  R   
Sbjct: 264 LSC---KILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLL--KYLDCRPQD 317

Query: 340 ISHSTQK--PFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALED- 396
           +        P   S+  +  +      ++ +     K+    + SL       L   E  
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL-----NVLEPAEYR 372

Query: 397 HQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKE 456
             F       RL     ++F           I      T        +     V  +  +
Sbjct: 373 KMFD------RL-----SVF------PPSAHI-----PTILLSLIWFDVIKSDVMVVVNK 410

Query: 457 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCG 516
             + + + K +P E +    ++    K    ++  L + +++ + +       F  +   
Sbjct: 411 LHKYSLVEK-QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI----PKTFDSDDLI 465

Query: 517 KTFLHKYKLRRHIVIH-STARP------FSCPVCKKQF--------K-RKQDVAGHDR-- 558
             +L +Y    HI  H            F        F        K R    A +    
Sbjct: 466 PPYLDQY-FYSHIGHHLKNIEHPERMTLFR-----MVFLDFRFLEQKIRHDSTAWNASGS 519

Query: 559 VVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRS- 617
           +++  ++L  YK Y C   PK    + A+ D  F+   +  +L             + S 
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNAILD--FLPKIE-ENL-------------ICSK 563

Query: 618 HIKIVHHGLKTQQS 631
           +  ++   L  +  
Sbjct: 564 YTDLLRIALMAEDE 577

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 321 TCNSCGLIFSEKKYLRNHMISHSTQKPFSCS--LCGKRFKRENGVINHQRLHQTKKVYKS 378
              +CG  F +   L+ H  SH+ Q P+ C    C KRF   + +  H+++H      K 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 379 YKCSLCPRVFTHL 391
             CS   + +T  
Sbjct: 65  DSCSFVGKTWTLY 77

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 154 SCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS--LCPKAFTHLAALEDHQYVHTG 211
               C K FK+ +++  H    H  +       Y+C    C K F+  + L+ H+ VH G
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQL-----PYECPHEGCDKRFSLPSRLKRHEKVHAG 58

Query: 212 QKSHMCNLCSARFTCKGALLGHIKVLH 238
                 + CS         L H+   H
Sbjct: 59  YPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 4/84 (4%)

Query: 482 FKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARP 537
           + C   +C + F     L  H+  H  +  + C +  C K F    +L+RH  +H+    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 538 FSCPVCKKQFKRKQDVAGHDRVVH 561
                C    K       H    H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 539 SCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCS--LCPKAFTYLGALEDHQFVHTG 596
               C K FK+   +  H    H  +       Y+C    C K F+    L+ H+ VH G
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQLP-----YECPHEGCDKRFSLPSRLKRHEKVHAG 58

Query: 597 QKTHLCTMCPASYATIGGLRSHIKIVH 623
                   C     T      H+   H
Sbjct: 59  YPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 353 CGKRFKRENGVINHQRLHQTKKVYKSYKCS--LCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           CGK FK+ N +  HQ  H T++    Y+C    C + F+  + L+ H+ VH G   +   
Sbjct: 9   CGKAFKKHNQLKVHQFSH-TQQ--LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 411 MCPAIFASIGGLRSHMKIVH 430
            C  +  +      H+   H
Sbjct: 66  SCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 5/84 (5%)

Query: 98  FKCD--DCDQCFLTKILLNKHKLLHT-EGHLTCN--LCGQTFRQKFRLLNHMISHSTEKP 152
           + C   +C + F     L  H+  HT +    C    C + F    RL  H   H+    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 153 FSCPICKKQFKRKHEVSKHDRIVH 176
                C    K      KH    H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 142 NHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFT 197
           +   S S  KP+ C  C K F R   ++ H + VH  +     + +KC +     +
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE-----RPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 531 IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFT 582
             S  +P+ C  C K F R   + GH + VH  +     + +KC +     +
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE-----RPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 185 KSYKCSLCPKAFTHLAALEDH-QYVHTGQKSHMCNLCSARFT 225
           K Y C  C K F+    L  H + VHT ++ H C +  +  +
Sbjct: 11  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINH-QRLHQTKKVYKSYKCSLCPRVFT 389
           +   S S  KP+ C  CGK F R + +  H +++H ++   + +KC +     +
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE---RPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 320 FTCNSCGLIFSEKKYLRNHM-ISHSTQKPFSCSLCGKRF 357
           + C SCG  FS   +L  H+   H++++P  C +     
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 570 KSYKCSLCPKAFTYLGALEDH-QFVHTGQKTHLCTMCPASYAT 611
           K Y C  C K F+    L  H + VHT ++ H C +  +  ++
Sbjct: 11  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.8 bits (126), Expect = 1e-08
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 2/104 (1%)

Query: 330 SEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRL--HQTKKVYKSYKCSLCPRV 387
           S     + +    +    F C  C   +     +  H     H     +++   +     
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 388 FTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHH 431
                +L + +     QK   C  C   F S+  L  HM    H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 6/96 (6%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQM-HFNKGGFTCNSCGLI---FSEKKYLRNHMISHST 344
             F+C DC   + + + L  H  +  H+       ++          K+ L         
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 345 QKPFSCSLCGKRFKRENGVINH--QRLHQTKKVYKS 378
           QK   C  CG  F+    +  H  +  H  K    S
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS 113

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 96  KPFKCDDCDQCFLTKILLNKHKLLHTEGHLT--------CNLCGQTFRQKFRLLNHMISH 147
             F+C DC   + T + L  H  ++  GH           N    +  +K  LL      
Sbjct: 18  SKFRCKDCSAAYDTLVELTVH--MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 148 STEKPFSCPICKKQFKRKHEVSKH 171
             +K   C  C   F+   ++S H
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.4 bits (117), Expect = 2e-07
 Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 2/94 (2%)

Query: 113 LNKHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
              +  + T      C  C   +     L  HM + +               ++    + 
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 172 DRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
             ++    K +  K  KC  C  +F  L  L  H
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 3e-07
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 1/93 (1%)

Query: 143 HMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAAL 202
           +    +    F C  C   +    E++ H        + + +++   +    +     +L
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSL 68

Query: 203 EDHQYVHTGQKSHMCNLCSARFTCKGALLGHIK 235
            + +     QK   C  C   F     L  H+ 
Sbjct: 69  LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 523 YKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFT 582
              + +  I + A  F C  C   +    ++  H        +   +++   +    +  
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKP 63

Query: 583 YLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHH 624
              +L + +     QK   C  C  S+ ++  L  H+    H
Sbjct: 64  RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.4 bits (104), Expect = 9e-06
 Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 480 KPFKCDDCDQRFLTKILLNKH-----KLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHST 534
             F+C DC   + T + L  H          + +  + N    +   K  L         
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 535 ARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKS 571
            +   C  C   F+  QD++ H       +K+    S
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 14/104 (13%)

Query: 590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKE 649
           +  + TG     C  C A+Y T+  L  H+    H         +++  +     +    
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK---- 65

Query: 650 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKH 693
                     +   + +      K  KC  C   F +   L+ H
Sbjct: 66  ----------RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 397 HQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQQSCQSSHESKTCSVDEINKE 456
           +  + TG     C  C A + ++  L  HM    H         +++  +     +    
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK---- 65

Query: 457 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKH 500
                     +   + +      K  KC  C   F +   L+ H
Sbjct: 66  ----------RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 1/94 (1%)

Query: 497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGH 556
              +  +      F C  C   +    +L  H+   +               ++      
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRK 65

Query: 557 DRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDH 590
             ++    K    K  KC  C  +F  L  L  H
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEG 240
           +S+ C +C +AF     L+ H   HT +K + C LC+  FT +  L+ H + +H G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 127 CNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQG 178
           C +C + F ++  L  H  SH+ EKP+ C +C + F R+  + +H + +H G
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 48.6 bits (117), Expect = 6e-08
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINH-QRLH 370
           F C  C   F+ +++L+ H  SH+ +KP+ C LC + F R + +I H Q++H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 346 KPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDH-QFVHTG 403
           + F C +C + F R+  +  H R H T +  K Y C LC R FT    L  H Q +H+G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH-TNE--KPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQG 563
           F C  C + F  +  L+RH   H+  +P+ C +C + F R+  +  H + +H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 151 KPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH-QYVH 209
           + F C +C + F R+  + +H R  H  +     K Y C LC +AFT    L  H Q +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS-HTNE-----KPYPCGLCNRAFTRRDLLIRHAQKIH 54

Query: 210 TGQKS 214
           +G   
Sbjct: 55  SGNLG 59

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 16/60 (26%), Positives = 29/60 (48%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ 629
           +S+ C +C +AF     L+ H   HT +K + C +C  ++     L  H + +H G   +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 536 RPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDH-QFVH 594
           R F C VC + F R++ +  H R  H  +     K Y C LC +AFT    L  H Q +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR-SHTNE-----KPYPCGLCNRAFTRRDLLIRHAQKIH 54

Query: 595 TG 596
           +G
Sbjct: 55  SG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 377 KSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGLKTQ 436
           +S+ C +C R F     L+ H   HT +K   C +C   F     L  H + +H G   +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.0 bits (113), Expect = 4e-07
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS 539
           + ++C  C+ +  + +    H+ L   ++   C YC   F      + H       +  +
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLT 71

Query: 540 CPVCKKQFKRKQDVAGHDRVVHQ 562
           C  C + FK    +  H   VH 
Sbjct: 72  CLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 7e-06
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 2/91 (2%)

Query: 87  ASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMIS 146
           +    V   + ++C  C+    + +    H+ L       C  C   F        H  S
Sbjct: 6   SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHE-S 63

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQ 177
               K  +C  C + FK    + +H   VH 
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPF 348
           + ++C  C     S +    H++          C  C L F   +  + H  S    K  
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHE-SKCEYKKL 70

Query: 349 SCSLCGKRFKRENGVINHQ 367
           +C  C + FK    +  HQ
Sbjct: 71  TCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.6 bits (99), Expect = 3e-05
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 316 NKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKV 375
           NK  + C  C    S      +H           C  C  RF         ++ H++K  
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPE----LKQEHESKCE 66

Query: 376 YKSYKCSLCPRVFTHLAALEDHQ 398
           YK   C  C R F    ++  HQ
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 6/87 (6%)

Query: 344 TQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTG 403
            ++ + C LC  +        +H+RL +         C  C   F      ++H+     
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA-----AVCPYCSLRFFSPELKQEHE-SKCE 66

Query: 404 QKTRLCTMCPAIFASIGGLRSHMKIVH 430
            K   C  C   F S   +  H   VH
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 9/94 (9%)

Query: 113 LNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHD 172
            +    +  +    C LC           +H           CP C  +F       +H 
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH- 61

Query: 173 RIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQ 206
                 +    YK   C  C + F    ++  HQ
Sbjct: 62  ------ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 4e-04
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 9/86 (10%)

Query: 506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           +K+ + C  C        +   H  +   A    CP C  +F   +       +  + + 
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPE-------LKQEHES 63

Query: 566 LIVYKSYKCSLCPKAFTYLGALEDHQ 591
              YK   C  C + F    ++  HQ
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 5e-04
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 9/90 (10%)

Query: 149 TEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYV 208
            ++ + C +C  +     E   H+R+           +  C  C   F      ++H+  
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRN--------AAVCPYCSLRFFSPELKQEHE-S 63

Query: 209 HTGQKSHMCNLCSARFTCKGALLGHIKVLH 238
               K   C  C   F    ++  H   +H
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)

Query: 140 LLNHMISHSTEKPFSCPI--CKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFT 197
           LLN+++     +P++CP+  C ++F R  E+++H RI H G      K ++C +C + F+
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRI-HTG-----QKPFQCRICMRNFS 60

Query: 198 HLAALEDHQYVHT 210
               L  H   HT
Sbjct: 61  RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRI 174
           C + F +   L  H+  H+ +KPF C IC + F R   ++ H R 
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 320 FTCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           + C   SC   FS    L  H+  H+ QKPF C +C + F R + +  H R H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 510 FSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDR 558
           ++C    C + F    +L RHI IH+  +PF C +C + F R   +  H R
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 335 LRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLA 392
           L N+++     +P++C +  C +RF R + +  H R+H      K ++C +C R F+   
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTG---QKPFQCRICMRNFSRSD 63

Query: 393 ALEDHQFVHT 402
            L  H   HT
Sbjct: 64  HLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 10/73 (13%)

Query: 525 LRRHIVIHSTARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFT 582
           L  ++V     RP++CPV  C ++F R  ++  H R+ H G      K ++C +C + F+
Sbjct: 9   LLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRI-HTG-----QKPFQCRICMRNFS 60

Query: 583 YLGALEDHQFVHT 595
               L  H   HT
Sbjct: 61  RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 9e-04
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 185 KSYKCSL--CPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIK 235
           + Y C +  C + F+    L  H  +HTGQK   C +C   F+    L  HI+
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKC-----SLCPKAFTHLAA 201
              +       C + F   HE+  H  + H G       ++ C         K+F     
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE--QNNHVCYWEECPREGKSFKAKYK 77

Query: 202 LEDHQYVHTGQKSHMC 217
           L +H  VHTG+KS   
Sbjct: 78  LVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 10/70 (14%)

Query: 96  KPFKCDDCDQCFLTKILLNKH-KLLHTEGHLT---------CNLCGQTFRQKFRLLNHMI 145
                  CD+ F T   L  H  + H  G            C   G++F+ K++L+NH+ 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 146 SHSTEKPFSC 155
            H+ EK    
Sbjct: 84  VHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 531 IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKC-----SLCPKAFTYLG 585
           I           C + F    ++  H  + H G       ++ C         K+F    
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE--QNNHVCYWEECPREGKSFKAKY 76

Query: 586 ALEDHQFVHTGQKTHLCT 603
            L +H  VHTG+K+   +
Sbjct: 77  KLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 15/71 (21%), Positives = 20/71 (28%), Gaps = 8/71 (11%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFT--------CNSCGLIFSEKKYLRNHMI 340
                  C + F +   L  H    H               C   G  F  K  L NH+ 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 341 SHSTQKPFSCS 351
            H+ +K    S
Sbjct: 84  VHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 9/70 (12%)

Query: 480 KPFKCDDCDQRFLTKILLNKH-KLLHFDKDYFSCNYC--------GKTFLHKYKLRRHIV 530
                  CD+ F T   L  H  + H      + + C        GK+F  KYKL  HI 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 531 IHSTARPFSC 540
           +H+  +    
Sbjct: 84  VHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINH-QRLHQTKKVYKSYKC-----SLCPRVFTHLAALE 395
              Q       C + F   + ++ H    H       ++ C         + F     L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 396 DHQFVHTGQKTRLCT 410
           +H  VHTG+K+   +
Sbjct: 80  NHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 12/79 (15%)

Query: 313 MHFNKGGFTCNSCGLIFSEKKYLRNHM----ISHSTQKPFSC-----SLCGKRFKRENGV 363
           +   +      SC   FS    L  H+    +    Q    C        GK FK +  +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 364 INHQRLHQTKKVYKSYKCS 382
           +NH R+H T    KS   S
Sbjct: 79  VNHIRVH-TG--EKSGPSS 94

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+CS+C KAF+H  +L  HQ +H+G+K    +
Sbjct: 2   SSGSS-GTGEK-----PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+CS+C KAF++  +L  HQ +H+G+K    +
Sbjct: 11  KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ CS+CGK F     +  HQR+H  KK   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG 42

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
                  +K    Y+CS+C + F+H  +L  HQ +H+G+K    +
Sbjct: 3   SGSSGTGEK---PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 10/72 (13%)

Query: 335 LRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL 394
                  H   +   CS CG  F R + +             K+  C  C +     AAL
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR----------KTPMCEKCRKDSCQEAAL 55

Query: 395 EDHQFVHTGQKT 406
              +   +G+KT
Sbjct: 56  NKDEGNESGKKT 67

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.1 bits (101), Expect = 9e-06
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 13/76 (17%)

Query: 140 LLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHL 199
                  H  ++   C  C   F R+  +S+              K+  C  C K     
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------------KTPMCEKCRKDSCQE 52

Query: 200 AALEDHQYVHTGQKSH 215
           AAL   +   +G+K+ 
Sbjct: 53  AALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 306 LNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVIN 365
             + +K +H       C+ CG+IF           + S +K   C  C K   +E  +  
Sbjct: 6   SGKRQK-IHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNK 57

Query: 366 HQRLHQTKKVY 376
            +     KK  
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 13/76 (17%)

Query: 525 LRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYL 584
             +   IH   R   C  C   F R+  ++               K+  C  C K     
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------------KTPMCEKCRKDSCQE 52

Query: 585 GALEDHQFVHTGQKTH 600
            AL   +   +G+KT 
Sbjct: 53  AALNKDEGNESGKKTS 68

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y C  C KAF   A L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GSGEK-----PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S +KP+ C  CGK F     ++ HQR+H  +   K    S
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE---KPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y C  C KAF     L  HQ +HTG+K    +
Sbjct: 11  KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKK 374
           +   S + + PF CS C + F + N ++ H+R H  K 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.8 bits (85), Expect = 7e-04
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 142 NHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
           +   S + E PF C  C + F +++ + +H+R  H  K 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKS 39

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKCS C KAFT  + L  HQ  HTG++    +
Sbjct: 2   SSGSS-GTGEK-----PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ CS CGK F R++G+  HQ+ H  +   +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE---RHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKCS C KAFT    L  HQ  HTG++    +
Sbjct: 11  KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K YKCS C K+FT  + L  HQ  HTG++    +
Sbjct: 11  KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKCS C K+FT+   L  HQ  HTG++    +
Sbjct: 11  KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ CS CGK F  ++ +  HQ+ H  +   +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE---RHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +       +K    YKCS C + FT  + L  HQ  HTG++    +
Sbjct: 2   SSGSSGTGEK---PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y C  C KAF H + L++HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP++C  CGK F  ++ +  HQR+H  +   K    S
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE---KPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y C  C KAF +   L++HQ +HTG+K    +
Sbjct: 11  KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      Y+C +C KAF+H A+L  HQ VH+G+K    +
Sbjct: 3   SGSS-GTGEK-----PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+C +C KAF++  +L  HQ VH+G+K    +
Sbjct: 11  KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C +C K F     +  HQR+H  +K   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG 42

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  GKK      +KC+ C K FT  ++L  HQ +HTG+K    +
Sbjct: 3   SGSS-GAGKK-----LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 554 AGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
                    GKK      +KC+ C K FT   +L  HQ +HTG+K    +
Sbjct: 1   GSSGSS-GAGKK-----LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +K F C+ C K F + + +  HQR+H  +   K    S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE---KPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
                  KK    +KC+ C + FT  ++L  HQ +HTG+K    +
Sbjct: 3   SGSSGAGKK---LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K++KC  C   F+  ++L  HQ VH G+K    +
Sbjct: 11  KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K++KC  C   F+   +L  HQ VH G+K    +
Sbjct: 11  KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S   +K + C  C   F + + +  HQ +H  +   K    S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE---KPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+CS+C K+FT  + L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ CS+CGK F +++ +  HQ++H  +   K    S
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE---KPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+CS+C K+FT    L  HQ +HTG+K    +
Sbjct: 11  KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC +C K+F + ++L  HQ +HTG+K    +
Sbjct: 3   SGSS-GTGEK-----PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC +C K+F Y  +L  HQ +HTG+K    +
Sbjct: 11  KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C +C K F+  + +  HQR+H  +   K    S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE---KPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
                  +K    YKC +C + F + ++L  HQ +HTG+K
Sbjct: 3   SGSSGTGEK---PYKCDVCHKSFRYGSSLTVHQRIHTGEK 39

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+C+ C KAF+  ++L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+C+ C KAF+   +L  HQ +HTG+K    +
Sbjct: 11  KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C+ CGK F   + +  HQ +H  KK   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG 42

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
                  +K    Y+C+ C + F+  ++L  HQ +HTG+K    +
Sbjct: 3   SGSSGTGEK---PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C KAF   ++L  HQ  H+G+K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC+ C KAF    +L  HQ  H+G+K    +
Sbjct: 11  KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C+ CGK F+  + +  HQ  H  +   K    S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE---KPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC  C K +     L+ HQ VHTG+K    +
Sbjct: 2   SSGSS-GSGEK-----PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S S +KP+ C  CGK +KR   +  HQR+H  +   K    S
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE---KLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC  C K +     L+ HQ VHTG+K    +
Sbjct: 11  KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 169 SKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                    G K      ++C+ C KAFT  + L  HQ +HTG+K    +
Sbjct: 1   GSSGSS-GTGGK-----HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S +  K F C+ CGK F R++ +  HQ++H  +   K    S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGE---KPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K ++C+ C KAFT    L  HQ +HTG+K    +
Sbjct: 11  KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +        K    ++C+ C + FT  + L  HQ +HTG+K    +
Sbjct: 2   SSGSSGTGGK---HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 1e-05
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 7/117 (5%)

Query: 281 SKEYMALNKPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMI 340
           SK+Y++ +K        +       L   +K++   +             ++      ++
Sbjct: 10  SKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLI--RAIVKTLIHNPQLLDESSYLYRLL 67

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDH 397
           +      F C LC   F     +  H R  +      +  C +C + FT   +  DH
Sbjct: 68  ASKAISQFVCPLCLMPFSSSVSLKQHIRYTE-----HTKVCPVCKKEFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.8 bits (102), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQG 563
           F C  C   F     L++HI    T     CPVCKK+F        H    H  
Sbjct: 75  FVCPLCLMPFSSSVSLKQHI--RYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.2 bits (98), Expect = 8e-05
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 8/119 (6%)

Query: 87  ASKENVALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMIS 146
            SK+ ++ +K        +       L   +       +   +       +   L  +++
Sbjct: 9   GSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA 68

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDH 205
                 F CP+C   F     + +H R            +  C +C K FT   +  DH
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYTE--------HTKVCPVCKKEFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 17/67 (25%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 112 LLNKHKLLHTEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKH 171
            L +           C LC   F     L  H+    TE    CP+CKK+F        H
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHI--RYTEHTKVCPVCKKEFTSTDSALDH 119

Query: 172 DRIVHQG 178
               H  
Sbjct: 120 VCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.5 bits (91), Expect = 6e-04
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 472 SKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVI 531
           SK+Y++ +K        +       L   +         +  +  +  L +      ++ 
Sbjct: 10  SKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYRLLA 68

Query: 532 HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDH 590
                 F CP+C   F     +  H R            +  C +C K FT   +  DH
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYTE--------HTKVCPVCKKEFTSTDSALDH 119

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           + Y C++C KAFT  + L  HQ +HTG+K    +
Sbjct: 11  RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + ++P+ C++CGK F   + +I HQ++H T +  K    S
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH-TGE--KPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           + Y C++C KAFT    L  HQ +HTG+K    
Sbjct: 11  RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC  C K +     L+ HQ VHTG++    +
Sbjct: 2   SSGSS-GTGEK-----PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C  CGK +  +  +  HQ++H  +   +    S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE---RPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC  C K +     L+ HQ VHTG++    +
Sbjct: 11  KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+C +C KAFT  A L  HQ  HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C +C K F ++  +  HQ+ H  +   K    S
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE---KPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 115 KHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
                 T E    C +C + F QK  L  H  +H+ EKP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+C +C KAFT    L  HQ  HTG+K    +
Sbjct: 11  KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      ++C+ C K+F     L  HQ +HTG+KS   +
Sbjct: 3   SGSS-GTGQK-----PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + QKPF C+ CGK F+ +  ++ HQR+H  +   KS   S
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE---KSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K ++C+ C K+F   G L  HQ +HTG+K+   +
Sbjct: 11  KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +K ++C  CGK F R   ++ H+RLH  +   K    S
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGE---KPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y C  C K+F+    L  H+ +H+G+K    +
Sbjct: 11  KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 142 NHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS 190
           +   S + EK ++C  C K F R   + KH+R+ H G+     K    S
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGE-----KPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C K FT  + L +HQ +HTG K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C+ CGK F + + + NHQR+H      K    S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV---KPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC+ C K FT    L +HQ +HTG K    +
Sbjct: 11  KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      Y C+ C KAFT  + L  HQ +HT QK    +
Sbjct: 3   SGSS-GTGEK-----PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C+ CGK F   + +I HQ++H TK+  K    S
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH-TKQ--KPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y C+ C KAFT    L  HQ +HT QK    +
Sbjct: 11  KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +       +K    Y C+ C + FT  + L  HQ +HT QK    +
Sbjct: 2   SSGSSGTGEK---PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G++      Y+CS C KAF   + L  HQ +H G+K    +
Sbjct: 2   SSGSS-GTGER-----HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + ++ + CS CGK F +++ +  HQR+H+ +   K    S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGE---KPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           + Y+CS C KAF     L  HQ +H G+K    +
Sbjct: 11  RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ CS CGK F  ++ +I H R H  +   K    S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGE---KPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K Y CS C KAF+  + L  H   H+G+K    
Sbjct: 11  KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 9e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y CS C KAF+    L  H   H+G+K    +
Sbjct: 11  KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
             + CS C K FTH   L  HQ +HTG++    +
Sbjct: 11  NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + + PF CS CGK F  +  +I HQ++H T +  +    S
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH-TGE--RPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +       +     + CS C +VFTH   L  HQ +HTG++    +
Sbjct: 2   SSGSSGTGEN---PFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
             + CS C K FT+   L  HQ +HTG++    +
Sbjct: 11  NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G K      Y+C+ C KAF+  + L  HQ VHTG+K    +
Sbjct: 2   SSGSS-GTGGK-----PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S +  KP+ C+ CGK F + + +  HQR+H  +K   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG 42

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 115 KHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
                 T      CN CG+ F Q  +L  H   H+ EKP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y+C+ C KAF+    L  HQ VHTG+K    +
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C KAF+  + L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C+ CGK F + + +  HQR+H  +   K    S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGE---KPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC+ C KAF+    L  HQ +HTG+K    +
Sbjct: 11  KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   +K      YKC  C K +     L+ HQ VH G+K+   +
Sbjct: 3   SGSS-GSVEK-----PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S S +KP+ C  CGK + R   +  HQR+H   +  K+   S
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH-MGE--KTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 142 NHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS 190
           +   S S EKP+ C  C K + R+  +  H R+ H G+     K+   S
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGE-----KTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
           +       +K    YKC  C + +     L+ HQ VH G+K
Sbjct: 2   SSGSSGSVEK---PYKCEDCGKGYNRRLNLDMHQRVHMGEK 39

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC  C K +     L+ HQ VH G+KT   +
Sbjct: 11  KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G K      Y CS C K F+  + L  HQ  HTG K    +
Sbjct: 2   SSGSS-GTGVK-----PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S +  KP+ CS C K F  ++ +I HQR H      K    S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGV---KPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y CS C K F+    L  HQ  HTG K    +
Sbjct: 11  KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y C+ C K+F   + L  H+ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C+ CGK F +++ +  H+R+H  +   K    S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE---KPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 115 KHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
                 T E    CN CG++F QK  L  H   H+ EKP   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC +C KAF   + L  H  VH+G++    +
Sbjct: 2   SSGSS-GTGEK-----PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C +CGK F+  + ++ H  +H  ++   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG 42

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC +C KAF     L  H  VH+G++    +
Sbjct: 11  KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G++      Y+C  C KAF   ++L  H+  HTG+K    +
Sbjct: 2   SSGSS-GTGQR-----PYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + Q+P+ C  CGK FK ++ +I H+R H  +   K    S
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE---KPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           + Y+C  C KAF    +L  H+  HTG+K    +
Sbjct: 11  RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           + +KC+ C K F   + L  H  +H+ +KS   +
Sbjct: 11  RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S ++PF C+ CGK F R + +  H RLH +++  KS   S
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH-SRE--KSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           + +KC+ C K F     L  H  +H+ +K+   +
Sbjct: 11  RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
             YKCS C K+F+    L  HQ +HT +K    +
Sbjct: 11  NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S +   P+ CS C K F  +  ++ HQR+H T++  K    S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH-TRE--KPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
             YKCS C K+F+    L  HQ +HT +K    +
Sbjct: 11  NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+C  C KAF+    L  HQ VHTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C  CGK F +   +I HQR+H  +   K    S
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGE---KPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y C+ C K F+  + L  HQ  HTG+K    +
Sbjct: 11  KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S +KP+ C+ CGK F +++ +  HQR H  +   K    S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE---KPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y C+ C K F+    L  HQ  HTG+K    +
Sbjct: 11  KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC  C KAF   ++   HQ +HTGQ+    +
Sbjct: 3   SGSS-GTGEK-----PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S + +KP+ C  CGK F   +    HQRLH  ++   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG 42

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC  C KAF    +   HQ +HTGQ+    +
Sbjct: 11  KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
           +       +K    YKC  C + F   ++   HQ +HTGQ+
Sbjct: 2   SSGSSGTGEK---PYKCMECGKAFGDNSSCTQHQRLHTGQR 39

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC+ C K FT  + L +H  +HTG+K    +
Sbjct: 3   SGSS-GSGEK-----PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S S +KP+ C+ CGK F + + + NH R+H  +   K    S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGE---KPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-04
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC+ C K FT    L +H  +HTG+K    +
Sbjct: 11  KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      Y C  C K+F   + L  HQ VH+G+K    +
Sbjct: 3   SGSS-GTGEK-----PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP++C  CGK F+  + ++ HQR+H  +K   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG 42

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K Y C  C K+F +   L  HQ VH+G+K    +
Sbjct: 11  KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S ++P+ C+ CGK F R + +I H + H  +   KS   S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE---KSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           + Y C+ C K F   + L +H   H  +KS   +
Sbjct: 11  RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           + Y C+ C K F     L +H   H  +K+   +
Sbjct: 11  RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K + CS C KAF+  + L  HQ  H  +K    +
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
             S +KPF CS C K F  ++ ++ HQ+ H  +   K    S
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE---KPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K + CS C KAF+    L  HQ  H  +K    +
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      ++C  C K+F+  + L  HQ +HTG+     +
Sbjct: 2   SSGSS-GTGEK-----PHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP  C  CGK F   + +I HQR+H  +        S
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGE---NPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K ++C  C K+F++   L  HQ +HTG+     +
Sbjct: 11  KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G++      Y+CS C KAF   + L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGER-----HYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + ++ + CS CGK F R++ +I HQR+H  +   K    S
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGE---KPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           + Y+CS C KAF     L  HQ +HTG+K    +
Sbjct: 11  RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K +KC +C K+F   + L  H  VHT +K    +
Sbjct: 11  KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S + +KPF C +CGK F   + +  H  +H  +K   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG 42

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K +KC +C K+F     L  H  VHT +K    +
Sbjct: 11  KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y C+ C KAF+  ++L  HQ +HTG+K    +
Sbjct: 11  KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S +  KP+ C+ CGK F   + +  HQ +H  +   K    S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE---KPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y C+ C KAF+   +L  HQ +HTG+K    
Sbjct: 11  KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K  KC+ C KAF   + L  HQ  H   K    +
Sbjct: 11  KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP  C+ CGK F  ++ +I HQR H   K   
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG 42

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K  KC+ C KAF +   L  HQ  H   K    +
Sbjct: 11  KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K +KC  C K FT  + L  HQ VHTG+K    +
Sbjct: 11  KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S S +KPF C  CGKRF + + + +HQR+H  +   K    S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE---KPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K +KC  C K FT    L  HQ VHTG+K    +
Sbjct: 11  KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKK 374
           + C  CG+   +   L+ H+ +H+  +P+ C+ C   FK +  +  H +     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 187 YKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKVLHEGYKR 243
           Y C  C       + L+ H   HT  + + C  C+  F  KG L  H+K      K+
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS-KAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 8e-05
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 512 CNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKK 565
           C  CG        L++HI  H+  RP+ C  C   FK K ++  H +     KK
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
            C  CG   ++   L  H+ +H+  +P+ C  C   FK K  ++KH +     KK
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 350 CSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
           C  CG R K+ + +  H R H      + Y C+ C   F     L  H       K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDV---RPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC+ C K F H + L  HQ +HTG+K    +
Sbjct: 3   SGSS-GTGEK-----PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C+ CGK F+  + +  HQR+H  +   K    S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGE---KPSGPS 44

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
             S + P+ CS CGK F R++ +I+HQR H  +    S
Sbjct: 4   GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
             Y+CS C KAF     L  HQ  H G+     
Sbjct: 9   NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
             Y+CS C KAF     L  HQ  H G+     
Sbjct: 9   NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSCPIC 158
            C +CG+ FR  + L  H +SHS EKP+S    
Sbjct: 14  ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 510 FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC 543
            +C  CGK F   Y L RH + HS  +P+S    
Sbjct: 13  VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 9e-05
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 177 QGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSA 222
            G      K   C +C K F  +  L  H+  H+G+K +     S 
Sbjct: 3   SGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLC 353
             C  CG IF +  +L  H +SHS +KP+S    
Sbjct: 13  VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.8 bits (85), Expect = 8e-04
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC 605
           K   C +C K F  +  L  H+  H+G+K +     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C K FT  + L  H+ VHTG K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C+ CGK F + + +  H+R+H   K   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG 42

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K YKC +C K F+  + L+ HQ VHTG+K    +
Sbjct: 11  KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S   +K + C +CGK F + + +  HQR+H  +   K    S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE---KPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC +C K F+    L+ HQ VHTG+K    +
Sbjct: 11  KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      +KC  C K++     L  HQ VHTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KPF C  CGK + +   +  HQR+H  +   K    S
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGE---KPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K +KC  C K++     L  HQ VHTG+K    +
Sbjct: 11  KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y+CS C K+F+    L  H   HT +K    +
Sbjct: 11  KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S   +KP+ CS CGK F     +  H   H  +   K    S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE---KPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y+C  C KAF   A L  HQ +HTG+K    +
Sbjct: 11  KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C  CGK F ++  +  HQR+H  +   K    S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE---KPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      +KC  C KAF     L  H  +HTG+K    +
Sbjct: 2   SSGSS-GSGEK-----PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S S +KPF C  CGK F++   + +H R+H  +K   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG 42

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           KS+ C  C K F +++AL  HQ VH G+K    +
Sbjct: 11  KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           KS+ C  C K F Y+ AL  HQ VH G+K    +
Sbjct: 11  KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
                  +K   S+ C  C + F +++AL  HQ VH G+K
Sbjct: 3   SGSSGSGEK---SHTCDECGKNFCYISALRIHQRVHMGEK 39

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 9e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVY 376
              S S +K  +C  CGK F   + +  HQR+H  +K  
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCS 41

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC  C K F     L  H  VHTG+K    +
Sbjct: 3   SGSS-GTGEK-----PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C  CGK F     +  H  +H  +   K    S
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE---KPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC  C K F     L  H  VHTG+K    +
Sbjct: 11  KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C K FT  + L  H+ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C+ CGK F + + +  H+ +H  +K   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K Y+C  C K F  +  L  H+ VHTG++S   +
Sbjct: 11  KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S +KP+ C  C K F +   +  H+R+H  +   +S   S
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGE---RSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y+C  C K F  +G L  H+ VHTG+++   
Sbjct: 11  KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KPF C  CGK F R + +  H +LH  +   K    S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGE---KPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      +KC  C K F+  +AL  H  +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K +KC  C K F+   AL  H  +HTG+K    +
Sbjct: 11  KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S   ++   CS CGK F + +  I H+R+H T +  K    S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH-TGE--KPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           + ++CS C K F   +    H+ +HTG+K    +
Sbjct: 11  RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC+ C K F+  + L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +K + C+ CGK F R + +  HQ++H  +K   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG 42

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ CS CGK F +++ +  HQR+H  +        S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE---NPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y+CS C K+F   + L  HQ +HTG+     +
Sbjct: 2   SSGSS-GTGEK-----PYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y+CS C K+F     L  HQ +HTG+     
Sbjct: 11  KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K YKC+ C KAF   + L  HQ +HTG+K    +
Sbjct: 11  KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C+ CGK F+  + +  HQ +H  +   K    S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGE---KPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K YKC+ C KAF     L  HQ +HTG+K    +
Sbjct: 11  KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
             Y+C  C KAF+    L  HQ  H G+K    +
Sbjct: 11  NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + + P+ C  CGK F R+  +I+HQR H  +   K    S
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGE---KPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
             Y+C  C KAF+    L  HQ  H G+K    +
Sbjct: 11  NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      ++C  C K FT  + L  HQ VHTG+K    +
Sbjct: 2   SSGSS-GSGEK-----PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S S +KPF C  CGKRF + + + +HQR+H  +   K    S
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE---KPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKCS C KAF     L +H+ +HTG +    +
Sbjct: 2   SSGSS-GSGEK-----PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S S +KP+ CS CGK F R   +  H+R+H   +   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG 42

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S S +KPF C  CGK F   +   +HQR H  +K   
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG 42

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           K +KC  C K F   +    HQ  H+G+K    +
Sbjct: 11  KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K +KC  C K F        HQ  H+G+K    +
Sbjct: 11  KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +       +K    +KC  C + F   +    HQ  H+G+K    +
Sbjct: 2   SSGSSGSGEK---PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
                   G+K      ++C+ C K+F+  + L  HQ +HTG+K    
Sbjct: 2   SSGSS-GTGEK-----PFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KPF C+ CGK F   + +  HQR+H  +   K    S
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGE---KPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K ++C+ C K+F+    L  HQ +HTG+K    +
Sbjct: 11  KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K Y+C+ C KAFT  + L  HQ +HTG+K    
Sbjct: 11  KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KP+ C+ CGK F   + +  HQ++H T +  K    S
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH-TGE--KPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y+C+ C KAFT    L  HQ +HTG+K    
Sbjct: 11  KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 366 HQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQK 405
                 T +  K Y+C+ C + FT  + L  HQ +HTG+K
Sbjct: 3   SGSSG-TGE--KPYRCAECGKAFTDRSNLFTHQKIHTGEK 39

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KPF CS C K F  ++ +I HQR H  +   K    S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE---KPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           K ++CS C KAF     L  HQ  HTG+K    +
Sbjct: 11  KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K ++CS C KAF   + L  HQ  HTG+K    
Sbjct: 11  KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 365 NHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTGQKTRLCT 410
           +       +K    ++CS C + F   + L  HQ  HTG+K    +
Sbjct: 2   SSGSSGTGEK---PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K Y+C+ C KAF   + L  H+  H G      
Sbjct: 11  KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
           +   S S +KP+ C+ CGK F  ++ +I H+R H       S
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y+C+ C KAF +   L  H+  H G      
Sbjct: 11  KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
              S + + P+ C  CGK F R++ +++HQ+ H  +    S
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
             Y+C  C K F+    L  HQ  H+GQ     
Sbjct: 11  NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      + C  C KAF+    L  H+ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
              S + +KPF C  CGK F    G+  H+R+H  +   K    S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGE---KPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  GKK      YKC+ C K FT  + L  H+ +HTG+K    +
Sbjct: 3   SGSS-GTGKK-----PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C+ CGK F + + +  H+ +H  +K   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 13/48 (27%), Positives = 16/48 (33%), Gaps = 6/48 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
                   G K      Y C+ C KAF   + L  H   HTG+     
Sbjct: 2   SSGSS-GTGMK-----PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 115 KHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
                 T      CN CG+ FR K  L+ H  +H+ E   S 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S +  KP+ C+ CGK F+ ++ +I H R H  +    
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS 42

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y C+ C KAF     L  H   HTG+     
Sbjct: 11  KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSH 215
           K Y C +C   F HL  L+ H  +HTG    
Sbjct: 10  KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
              S   +KP+ C +CG RF+    + +H R+H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 143 HMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKK 180
              S   EKP+ C IC  +F+    +  H RI H G  
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSG 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           K Y C +C   F +L  L+ H  +HTG  
Sbjct: 10  KPYPCEICGTRFRHLQTLKSHLRIHTGSG 38

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           KS++C  C + FT  + L  HQ +HTG+K    
Sbjct: 11  KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           +   S S+ K   C  CG+ F  ++ +  HQR+H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT 603
           KS++C  C + FT    L  HQ +HTG+K    +
Sbjct: 11  KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      YKC  C K F   + L  HQ +HTG+K    +
Sbjct: 2   SSGSS-GTGEK-----PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C  CGK F+R + +  HQ +H  +K   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG 42

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                  G+K      YKC+ C K FT  + L  H+ +HTG+K    +
Sbjct: 3   SGSS-GTGEK-----PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 3e-04
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S + +KP+ C+ CGK F + + ++ H+ +H  +K   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG 42

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
           +   S + +KP+SC++CGK F     +  H R+H  + +  
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG 42

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
                   G+K      Y C++C KAF   A L  H  VHT +     +
Sbjct: 2   SSGSS-GTGEK-----PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 115 KHKLLHT-EGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
                 T E   +CN+CG+ F     L  H+  H+ E     
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
           K YKC  C   F  +A L  H  +HTG  
Sbjct: 10  KPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           K YKC  C   F  +  L  H  +HTG  
Sbjct: 10  KPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
              S   +KP+ C  CG RF +   +  H  +H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + ++P  C+ CGK F +   +I HQR+H  +   K    S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE---KPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCN 218
           + +KC+ C K+F   A L  HQ +HTG+K    +
Sbjct: 11  RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K Y+C+ C KAF   + L  HQ  HTG+     
Sbjct: 11  KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYK 377
              S + +KP+ C+ C K F  ++ ++ HQR H  +    
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS 42

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC 602
           K Y+C+ C KAF     L  HQ  HTG+     
Sbjct: 11  KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
           + Y+C  C K+F    +L  H+ +HTG  
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTGSG 37

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           + Y+C  C K+F   G+L  H+ +HTG  
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTGSG 37

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVY 376
             S Q+ + C  CGK F+++  +  H+R+H      
Sbjct: 4   GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
             S +KP+SC+ C + F   N ++ HQ++H  K    S
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.5 bits (85), Expect = 8e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
           K Y C+ C + F+    L  HQ +HT +     
Sbjct: 9   KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVY 376
              S   +KP+ C  CGK F ++  +I H R+H      
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
                  G+K      Y+C  C KAF+   +L  H  VHTG  
Sbjct: 2   SSGS-SGGEK-----PYRCDQCGKAFSQKGSLIVHIRVHTGSG 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 555 GHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           G       G+K      Y+C  C KAF+  G+L  H  VHTG  
Sbjct: 1   GSSGS-SGGEK-----PYRCDQCGKAFSQKGSLIVHIRVHTGSG 38

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 337 NHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCS 382
           +   S + +KP+ C  CGK F +   +I H R + T +  K    S
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE--KPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 142 NHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS 190
           +   S + +KP+ C  C K F +   + +H R  H G+     K    S
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE-----KPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 6e-04
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 7/49 (14%)

Query: 171 HDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQ-YVHTGQKSHMCN 218
                  GKK      Y+C  C KAF    +L  H  Y HTG+K    +
Sbjct: 3   SGSS-GTGKK-----PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
             Y C  C K+FT   +L  HQ   +   
Sbjct: 10  TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 341 SHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           S   + P+ C  CGK F +   +  HQR  
Sbjct: 5   SSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
             Y C  C K+FT  G+L  HQ   +   
Sbjct: 10  TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 142 NHMISHSTEKPFSC--PICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCS 190
           +   S + EKPF+C  P C  +F R  E+S+H R  H G      K    S
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSG-----VKPSGPS 46

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 37.2 bits (85), Expect = 7e-04
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQG 178
            S EKP+SCP+C  +FKRK  +S H R     
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKS 378
              S +  K ++C+ CGK F R   +  HQ++H  K    S
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 170 KHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMC 217
                     K     SY C+ C KAFT +  L  HQ +HT +     
Sbjct: 2   SSGSS-GTDSK-----SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.4 bits (87), Expect = 9e-04
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 497 LNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSC--PVCKKQFKRKQD 552
            +  ++         C++  CGKT+     L+ H   H+  +PFSC    C+++F R  +
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 553 VAGHDRV 559
           ++ H R 
Sbjct: 65  LSRHRRT 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	712
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.33
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.32
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.32
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.29
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.28
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.25
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.18
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.03
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.03
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.99
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.96
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.92
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.89
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.86
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.84
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.81
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.79
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.78
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.77
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.75
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.73
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.72
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.72
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.72
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.7
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.68
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.66
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.55
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.54
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.53
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.52
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.49
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.43
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.42
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.42
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.38
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.34
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.33
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.32
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.22
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.2
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.19
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.16
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.16
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.15
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.14
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.14
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.42
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.39
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.1
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.1
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.09
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.09
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.08
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.07
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.04
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.03
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.03
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.03
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.02
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.02
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.24
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.23
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.97
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.94
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.93
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.93
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.87
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.84
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.83
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.82
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.92
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.65
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.52
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.5
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.26
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.85
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.78
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.47
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.43
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.92
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.6
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.02
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.98
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.76
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.43
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	80.26

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.3e-35  Score=277.88  Aligned_cols=175  Identities=33%  Similarity=0.678  Sum_probs=143.8

Q ss_pred             hccCCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHh
Q psy16830        476 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAG  555 (712)
Q Consensus       476 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~  555 (712)
                      ..++++|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   95 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA   95 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHH
Confidence            45578999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCC
Q psy16830        556 HDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSS  635 (712)
Q Consensus       556 H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~  635 (712)
                      |++.++ ++     ++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++ |.           
T Consensus        96 H~~~h~-~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~-----------  157 (190)
T 2i13_A           96 HQRTHT-GE-----KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT-HT-----------  157 (190)
T ss_dssp             HHHHHH-TC-----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HH-----------
T ss_pred             HHHhcC-CC-----CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh-cC-----------
Confidence            999844 44     3899999999999999999999999999999999999999999999999987 42           


Q ss_pred             CCCCccchhhccccccccccccccCCCccccchhccCCCccCChhhhhhhChHHHHhHHhhhcCCCcc
Q psy16830        636 HESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYF  703 (712)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  703 (712)
                                                         +++||.|++||+.|.+...|..|+++|+|++||
T Consensus       158 -----------------------------------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          158 -----------------------------------GEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             -----------------------------------CCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             -----------------------------------CCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence                                               357899999999999999999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.9e-34  Score=268.67  Aligned_cols=94  Identities=32%  Similarity=0.627  Sum_probs=56.3

Q ss_pred             HHHHHHHHhhcCCCCCccccccccccCChhhhhccccccccCcccccccceecCCcccccCChHHHHHHHHHhcCCCCcC
Q psy16830        137 KFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQKSHM  216 (712)
Q Consensus       137 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  216 (712)
                      ...|..|++.|.+++||.|++|++.|.+...|..|++.+++.      ++|.|..|++.|.+...|..|+++|.++++|.
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   79 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE------KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK   79 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCC------CCccCCCcCchhCCHHHHHHHHHhcCCCCCcc
Confidence            356788888888889999999999999999999998874433      47889999999999999999998888888888


Q ss_pred             CccccccCCChhHHHHHHHH
Q psy16830        217 CNLCSARFTCKGALLGHIKV  236 (712)
Q Consensus       217 C~~C~~~f~~~~~L~~H~~~  236 (712)
                      |++|++.|.+...|..|++.
T Consensus        80 C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHh
Confidence            88888888888888888766

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=5.9e-31  Score=246.10  Aligned_cols=170  Identities=29%  Similarity=0.495  Sum_probs=154.7

Q ss_pred             hccCCCCCC--cchhhhhcchhhHhhccccccCCCcccc--CCCCcccCChHHHhhhhhhcCCCCcccCc--ccccccCC
Q psy16830        476 MALNKPFKC--DDCDQRFLTKILLNKHKLLHFDKDYFSC--NYCGKTFLHKYKLRRHIVIHSTARPFSCP--VCKKQFKR  549 (712)
Q Consensus       476 ~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~p~~C~--~C~~~f~~  549 (712)
                      ....++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+++|++++||.|+  .|++.|.+
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            344789999  7899999999999999999999999999  88999999999999999999999999999  89999999


Q ss_pred             hhhHHhhhhhccc-CccccccCCccc--CcCCcccCCchhHHhHHhhhcCCCcccCCC--CccccCCchhhhhHHhhhcc
Q psy16830        550 KQDVAGHDRVVHQ-GKKLIVYKSYKC--SLCPKAFTYLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       550 ~~~l~~H~~~~h~-~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~  624 (712)
                      ...|..|++..|. ++     ++|.|  ++|++.|.+...|..|+++|++++||.|++  |++.|.+...|.+|+++ |.
T Consensus        87 ~~~l~~H~~~~h~~~~-----~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~  160 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKI-----CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HA  160 (190)
T ss_dssp             HHHHHHHHHTTSSTTT-----SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS-SC
T ss_pred             HHHHHHHHHHhcCCCc-----ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH-hC
Confidence            9999999966674 43     48999  889999999999999999999999999988  99999999999999986 52


Q ss_pred             CCCCCccccCCCCCCccchhhccccccccccccccCCCccccchhccCCCccCCh---hhhhhhChHHHHhHHhhhcCC
Q psy16830        625 GLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNKPFKCDD---CDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       625 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~---C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      +                                                 |.|.+   |++.|.+...|..|+++|+++
T Consensus       161 ~-------------------------------------------------~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          161 G-------------------------------------------------YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             S-------------------------------------------------CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             C-------------------------------------------------CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            1                                                 67888   999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.8e-28  Score=229.12  Aligned_cols=166  Identities=30%  Similarity=0.576  Sum_probs=135.3

Q ss_pred             cceec--CCcccccCChHHHHHHHHHhcCCCCcCC--ccccccCCChhHHHHHHHHhccCCCCCCcccccccCCcccccc
Q psy16830        185 KSYKC--SLCPKAFTHLAALEDHQYVHTGQKSHMC--NLCSARFTCKGALLGHIKVLHEGYKRPQESCQSSHESKTCSVD  260 (712)
Q Consensus       185 ~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~  260 (712)
                      ++|.|  ..|++.|.+...|..|+++|.++++|.|  +.|++.|.+...|..|+++ |.+                    
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~--------------------   69 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTG--------------------   69 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT-TTT--------------------
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHH-ccC--------------------
Confidence            57888  6799999888889999888888888888  7888888888888888876 332                    


Q ss_pred             cccccccccccccccCCCcchhhhhccCCCccCC--cchhhccCHHHHHHHHHhhc-cCCCCccc--CcCccccCChhHH
Q psy16830        261 EINKENEEGATIRKVKPHEDSKEYMALNKPFKCD--DCFQCFLSKILLNQHKKQMH-FNKGGFTC--NSCGLIFSEKKYL  335 (712)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h-~~~~~~~C--~~C~~~f~~~~~l  335 (712)
                                                 +++|.|.  .|++.|.+...|..|++..| .+..+|.|  +.|++.|.+...|
T Consensus        70 ---------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L  122 (190)
T 1tf6_A           70 ---------------------------EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL  122 (190)
T ss_dssp             ---------------------------CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHH
T ss_pred             ---------------------------CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHH
Confidence                                       2578888  78888888888888885566 46778888  7888888888888


Q ss_pred             HHHHHhcCCCCCccCCc--ccccccChHHHHHHHHHhcCCCCCCceecCC---ChhhccChHHHHHHHhhhcCC
Q psy16830        336 RNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSL---CPRVFTHLAALEDHQFVHTGQ  404 (712)
Q Consensus       336 ~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~~  404 (712)
                      ..|+++|++++||.|+.  |++.|.+...|..|+++|++      |.|+.   |++.|.+...|..|+++|+++
T Consensus       123 ~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~------~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS------CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC------CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            88888888888888877  88888888888888888765      67777   888888888888888887753

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.2e-25  Score=200.84  Aligned_cols=105  Identities=29%  Similarity=0.530  Sum_probs=52.1

Q ss_pred             ccccCCCCcccCChHHHhhhhh---hcCCCCcccCcc-----cccccCChhhHHhhhhhcccCccccccCCcccCc--CC
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHIV---IHSTARPFSCPV-----CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CP  578 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~~---~H~~~~p~~C~~-----C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~  578 (712)
                      +|.|+.|++.|.+...|..|++   +|.+++||.|++     |++.|.+...|..|++. |.++     ++|.|++  |+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~~~C~   76 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGE-----KPHKCTFEGCR   76 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH-HHCC-----CCCCCCSTTCC
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh-cCCC-----CCccCCCCCCC
Confidence            3444444444444444444444   344444444432     22555555555555554 2222     1455553  55


Q ss_pred             cccCCchhHHhHHhhhcCCCcccCCC--CccccCCchhhhhHH
Q psy16830        579 KAFTYLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHI  619 (712)
Q Consensus       579 ~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~  619 (712)
                      +.|.+...|..|+++|++++||.|++  |++.|.+...|..|+
T Consensus        77 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           77 KSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             CCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            55555555555555555555555555  555555555555555

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.4e-25  Score=202.15  Aligned_cols=138  Identities=31%  Similarity=0.644  Sum_probs=128.1

Q ss_pred             CCCCCcchhhhhcchhhHhhccc---cccCCCccccCCC-----CcccCChHHHhhhhhhcCCCCcccCcc--cccccCC
Q psy16830        480 KPFKCDDCDQRFLTKILLNKHKL---LHFDKDYFSCNYC-----GKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKR  549 (712)
Q Consensus       480 ~~~~C~~C~~~f~~~~~L~~H~~---~h~~~~~~~C~~C-----~k~f~~~~~L~~H~~~H~~~~p~~C~~--C~~~f~~  549 (712)
                      .+|.|+.|++.|.+...|..|++   .|.+.++|.|++|     ++.|.+...|..|+++|++++||.|++  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            57999999999999999999998   7889999998753     499999999999999999999999986  9999999


Q ss_pred             hhhHHhhhhhcccCccccccCCcccCc--CCcccCCchhHHhHH-hhhcCCCcccCCC--CccccCCchhhhhHHhhhc
Q psy16830        550 KQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQ-FVHTGQKTHLCTM--CPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       550 ~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H  623 (712)
                      ...|..|++. |.++     ++|.|++  |++.|.+...|..|+ ++|++++||.|.+  |++.|.+...|.+|++++|
T Consensus        82 ~~~l~~H~~~-h~~~-----~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           82 LENLKTHLRS-HTGE-----KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHHHHH-TTTC-----CCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHHHHHHH-cCCC-----CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            9999999998 5554     3899999  999999999999999 8999999999999  9999999999999999854

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.3e-23  Score=181.37  Aligned_cols=117  Identities=30%  Similarity=0.604  Sum_probs=106.0

Q ss_pred             cCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhc--ccCccccccCCcccCcCCcccC
Q psy16830        505 FDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVV--HQGKKLIVYKSYKCSLCPKAFT  582 (712)
Q Consensus       505 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~--h~~~~~~~~~~~~C~~C~~~f~  582 (712)
                      .++++|.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|++.+  +.++     ++|.|++|++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-----~~~~C~~C~~~f~   77 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE-----QVFTCSVCQETFR   77 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCC-----CCEECSSSCCEES
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCC-----CCeECCCCCCccC
Confidence            46778999999999999999999999999999999999999999999999998864  3333     4899999999999


Q ss_pred             CchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        583 YLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       583 ~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +...|..|+++|++++||.|.+|++.|.+...|.+|++.+|.+.
T Consensus        78 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           78 RRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             SHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999999999999999999999999889775

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=2.9e-24  Score=185.04  Aligned_cols=109  Identities=24%  Similarity=0.457  Sum_probs=77.4

Q ss_pred             hhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcC
Q psy16830        498 NKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLC  577 (712)
Q Consensus       498 ~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  577 (712)
                      ..|.++|.|+++|.|++||++|.+...|..|+++|++++||.|++|++.|.+...|..|+++ |.+++     ||.|++|
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k-----~~~C~~C   84 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGER-----RYQCLAC   84 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTCC-----CEEESSS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCCc-----cccCCCC
Confidence            34456667777777777777777777777777777777777777777777777777777765 55553     6777777


Q ss_pred             CcccCCchhHHhHHhhhcCCC------cccCCCCccccCCc
Q psy16830        578 PKAFTYLGALEDHQFVHTGQK------THLCTMCPASYATI  612 (712)
Q Consensus       578 ~~~f~~~~~L~~H~~~H~~~k------~~~C~~C~~~f~~~  612 (712)
                      |+.|.+...|..|+++|++++      +|+|.+|++.|...
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            777777777777777776653      46777777766543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=2.7e-23  Score=179.01  Aligned_cols=118  Identities=21%  Similarity=0.359  Sum_probs=104.7

Q ss_pred             hhhccCCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhH
Q psy16830        474 EYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDV  553 (712)
Q Consensus       474 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l  553 (712)
                      ....++++|+|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            45677899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        554 AGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       554 ~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      ..|++.+|++++....++|+|.+|++.|.       |+.+|++++
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~-------~~~~h~~ek  132 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQI-------RQYAYLSDR  132 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCC-------CCCHHHHCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhh-------hcccccccC
Confidence            99999988776655667899999998875       455666665

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=182.39  Aligned_cols=130  Identities=28%  Similarity=0.403  Sum_probs=102.5

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhhh-cCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccC
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIVI-HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFT  582 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~  582 (712)
                      .....+|.|.+|++.|.+...|..|+++ |.+..+.....|                          .+|.|.+|++.|.
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~--------------------------~~~~C~~C~~~f~   73 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------------YWEECPREGKSFK   73 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC--------------------------CBTTCTTSSCCCS
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc--------------------------cccCCCCcccccC
Confidence            4456677788888888888888888776 555544322111                          2478999999999


Q ss_pred             CchhHHhHHhhhcCCCcccCCC--CccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccccC
Q psy16830        583 YLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVK  660 (712)
Q Consensus       583 ~~~~L~~H~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~  660 (712)
                      +...|..|+++|+++++|.|.+  |++.|.+...|.+|+++ |.                                    
T Consensus        74 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-h~------------------------------------  116 (155)
T 2rpc_A           74 AKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HT------------------------------------  116 (155)
T ss_dssp             SHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTT-TC------------------------------------
T ss_pred             CHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHh-hC------------------------------------
Confidence            9999999999999999999988  99999999999999876 42                                    


Q ss_pred             CCccccchhccCCCccCCh--hhhhhhChHHHHhHHhhhcCCCccccc
Q psy16830        661 PHEDSKEYMALNKPFKCDD--CDQRFLTKILLNKHKLLHFDKDYFSCN  706 (712)
Q Consensus       661 ~~~~~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~  706 (712)
                                +++||.|.+  |++.|.+.+.|..|+++|+++++|.|.
T Consensus       117 ----------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          117 ----------GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ----------SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ----------CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence                      346789987  999999999999999999999999885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1e-21  Score=169.36  Aligned_cols=119  Identities=30%  Similarity=0.614  Sum_probs=101.4

Q ss_pred             cCCCCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHH
Q psy16830        315 FNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL  394 (712)
Q Consensus       315 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l  394 (712)
                      .++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+..++......+|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            35678888888888888888888888888888899999999999888999998875433333489999999999999999


Q ss_pred             HHHHhhhcCCCcccCCCCccccCChHHHHhHHHHhhcCC
Q psy16830        395 EDHQFVHTGQKTRLCTMCPAIFASIGGLRSHMKIVHHGL  433 (712)
Q Consensus       395 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  433 (712)
                      ..|+++|+++++|.|+.|++.|.+...|..|++..|.+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999999999999998888664

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=2.6e-22  Score=180.53  Aligned_cols=120  Identities=33%  Similarity=0.612  Sum_probs=107.4

Q ss_pred             cCCCCCCcchhhhhcchhhHhhcccc-ccCCCc--------cccCCCCcccCChHHHhhhhhhcCCCCcccCcc--cccc
Q psy16830        478 LNKPFKCDDCDQRFLTKILLNKHKLL-HFDKDY--------FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQ  546 (712)
Q Consensus       478 ~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~--C~~~  546 (712)
                      ...+|.|..|++.|.+...|..|++. |.+..+        |.|++|++.|.+...|..|+++|++++||.|++  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            46789999999999999999999997 766554        889999999999999999999999999999988  9999


Q ss_pred             cCChhhHHhhhhhcccCccccccCCcccCc--CCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        547 FKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       547 f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      |.+...|..|++. |.++     ++|.|.+  |++.|.+...|..|+++|+|++||.|.
T Consensus       102 f~~~~~L~~H~~~-h~~~-----~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRT-HTGE-----KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTT-TCSS-----CSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHh-hCCC-----CCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999987 5554     3899997  999999999999999999999999885

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=3.2e-22  Score=171.13  Aligned_cols=111  Identities=30%  Similarity=0.684  Sum_probs=99.2

Q ss_pred             cCCCccccCC--CCcccCChHHHhhhhhhcCCCCcccCc--ccccccCChhhHHhhhhhcccCccccccCCcccCcCCcc
Q psy16830        505 FDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCP--VCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKA  580 (712)
Q Consensus       505 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~  580 (712)
                      .++++|.|++  |++.|.+...|..|+++|.+++||.|+  .|++.|.+...|..|++. |.++     ++|.|++|++.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~   75 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGV-----KPFQCKTCQRK   75 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHCC-----CCEECTTTCCE
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-cCCC-----CCccCCccCch
Confidence            4677899987  999999999999999999999999998  699999999999999887 4444     37999999999


Q ss_pred             cCCchhHHhHHhhhcCCCcccC--CCCccccCCchhhhhHHhh
Q psy16830        581 FTYLGALEDHQFVHTGQKTHLC--TMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       581 f~~~~~L~~H~~~H~~~k~~~C--~~C~~~f~~~~~L~~H~~~  621 (712)
                      |.+...|..|+++|++++||.|  ++|++.|.+...|.+|+++
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           76 FSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             hCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            9999999999999999999999  8899999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=5.3e-22  Score=171.04  Aligned_cols=114  Identities=31%  Similarity=0.609  Sum_probs=81.9

Q ss_pred             CCccccC--CCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCc--CCcccC
Q psy16830        507 KDYFSCN--YCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFT  582 (712)
Q Consensus       507 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~  582 (712)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|++. |.++     ++|.|++  |++.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~~~C~~~f~   75 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-HTGE-----KPFQCTFEGCGKRFS   75 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG-TSCC-----CCEECCSTTCCCEES
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH-cCCC-----CCeeCCCCCCcCccC
Confidence            4567777  6777777777777777777 67777777777777777777777776 4443     2677875  888888


Q ss_pred             CchhHHhHHhhhcCCCcccCC--CCccccCCchhhhhHHhhhccCCCC
Q psy16830        583 YLGALEDHQFVHTGQKTHLCT--MCPASYATIGGLRSHIKIVHHGLKT  628 (712)
Q Consensus       583 ~~~~L~~H~~~H~~~k~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~  628 (712)
                      +...|..|+++|+++++|.|+  .|++.|.+...|.+|+++ |+++++
T Consensus        76 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k~  122 (124)
T 1ubd_C           76 LDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKN  122 (124)
T ss_dssp             CHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH-HC----
T ss_pred             CHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH-Hccccc
Confidence            888888888888888888885  488888888888888776 655443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=4.1e-22  Score=171.75  Aligned_cols=116  Identities=30%  Similarity=0.683  Sum_probs=102.2

Q ss_pred             CCCCCCc--chhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc--cccccCChhhHH
Q psy16830        479 NKPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKRKQDVA  554 (712)
Q Consensus       479 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~--C~~~f~~~~~l~  554 (712)
                      +++|.|+  .|++.|.+...|..|++.| +.++|.|++|++.|.+...|..|+++|++++||.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            5789999  8999999999999999999 8899999999999999999999999999999999986  999999999999


Q ss_pred             hhhhhcccCccccccCCcccCc--CCcccCCchhHHhHHhhhcCCCccc
Q psy16830        555 GHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHL  601 (712)
Q Consensus       555 ~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~  601 (712)
                      .|++. |.++     ++|.|++  |++.|.+...|..|+++|+++++++
T Consensus        82 ~H~~~-h~~~-----~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRI-HTGD-----RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHH-HHCC-----CCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHH-hCCC-----CceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            99998 5554     3899964  9999999999999999999999874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=2.1e-20  Score=159.70  Aligned_cols=109  Identities=32%  Similarity=0.624  Sum_probs=73.3

Q ss_pred             CCCCcccCc--CccccCChhHHHHHHHhcCCCCCccCC--cccccccChHHHHHHHHHhcCCCCCCceecCCChhhccCh
Q psy16830        316 NKGGFTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCS--LCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHL  391 (712)
Q Consensus       316 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~  391 (712)
                      ++++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|++++   +|.|++|++.|.+.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK---PFQCKTCQRKFSRS   79 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCC---CEECTTTCCEESCH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCC---CccCCccCchhCCH
Confidence            455666665  666666666666666666666666666  56666666666666666666654   56676777777666


Q ss_pred             HHHHHHHhhhcCCCcccC--CCCccccCChHHHHhHHH
Q psy16830        392 AALEDHQFVHTGQKTRLC--TMCPAIFASIGGLRSHMK  427 (712)
Q Consensus       392 ~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~  427 (712)
                      ..|..|+++|+++++|.|  +.|++.|.+...|..|++
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            667777666666666777  567777777777776664

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=1.7e-19  Score=152.79  Aligned_cols=101  Identities=18%  Similarity=0.221  Sum_probs=76.9

Q ss_pred             hHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhc-ccCccccccCCcccCcCCccc--CCchhHHhHHhhhcCCC
Q psy16830        522 KYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVV-HQGKKLIVYKSYKCSLCPKAF--TYLGALEDHQFVHTGQK  598 (712)
Q Consensus       522 ~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~-h~~~~~~~~~~~~C~~C~~~f--~~~~~L~~H~~~H~~~k  598 (712)
                      .+.|..|+++|++++||.|++|++.|.+...|..|++.+ |.+.+    ..+.|.+|++.|  .....|..|+++|++++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~----~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDD----NHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCS----CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccC----CCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            345666777777777777777777777777777777650 11111    135599999888  88899999999999999


Q ss_pred             cccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        599 THLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      ||.|.+|++.|.+...|.+|++++|...
T Consensus        80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             ceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999999877554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=3.5e-18  Score=142.31  Aligned_cols=89  Identities=31%  Similarity=0.597  Sum_probs=67.3

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhcccc
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKE  649 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~  649 (712)
                      ++|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|.+...|..|+++ |.                         
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~-------------------------   69 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI-HS-------------------------   69 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG-SC-------------------------
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH-hC-------------------------
Confidence            4677888888887777888888778777788888888888888888888765 32                         


Q ss_pred             ccccccccccCCCccccchhccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccc
Q psy16830        650 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSC  705 (712)
Q Consensus       650 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  705 (712)
                                           ++++|.|.+|++.|.+...|..|+++|.++++|.+
T Consensus        70 ---------------------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           70 ---------------------KEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             ---------------------CCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             ---------------------CCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence                                 24567788888888888888888888877777754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=7.6e-18  Score=140.24  Aligned_cols=91  Identities=31%  Similarity=0.716  Sum_probs=63.5

Q ss_pred             CCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCch
Q psy16830        506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLG  585 (712)
Q Consensus       506 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~  585 (712)
                      .+++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|++. |.++     ++|+|.+|++.|.+..
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~~~~   87 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI-HSKE-----KPFKCQECGKGFCQSR   87 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG-SCCC-----CTTSCSSSCCCCSSHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH-hCCC-----CCeECCCcCCcccCHH
Confidence            455677777777777777777777777777777777777777777777777665 3333     2677777777777777


Q ss_pred             hHHhHHhhhcCCCcccC
Q psy16830        586 ALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       586 ~L~~H~~~H~~~k~~~C  602 (712)
                      .|..|+++|++++||.+
T Consensus        88 ~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           88 TLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHhCCCCCCcC
Confidence            77777777777777654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.6e-18  Score=144.55  Aligned_cols=105  Identities=16%  Similarity=0.200  Sum_probs=93.5

Q ss_pred             chhhHhhccccccCCCccccCCCCcccCChHHHhhhhhh--cCCCCccc-Cccccccc--CChhhHHhhhhhcccCcccc
Q psy16830        493 TKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVI--HSTARPFS-CPVCKKQF--KRKQDVAGHDRVVHQGKKLI  567 (712)
Q Consensus       493 ~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~-C~~C~~~f--~~~~~l~~H~~~~h~~~~~~  567 (712)
                      +...|..|+++|.++++|.|++|++.|.....|..|+++  |.+++++. |++|++.|  .....|..|++. |.++   
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~~---   78 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDAQ---   78 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCCC---
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhc-cCCC---
Confidence            456789999999999999999999999999999999998  87777765 99999999  899999999987 6665   


Q ss_pred             ccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        568 VYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       568 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                        ++|.|++|++.|.+...|..|+++|.......++
T Consensus        79 --~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           79 --KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             --SSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             --cceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence              3899999999999999999999999877666554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.4e-18  Score=140.80  Aligned_cols=94  Identities=15%  Similarity=0.304  Sum_probs=57.6

Q ss_pred             hhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCcc
Q psy16830        528 HIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPA  607 (712)
Q Consensus       528 H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~  607 (712)
                      ++++|++++||.|++|++.|.+...|..|++. |.       ++|.|.+|++.|.....|..|++ |++++||+|.+|++
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~-------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~   77 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERL-CR-------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMR   77 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-HH-------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTE
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHH-CC-------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccc
Confidence            34555555666666666666666666666555 21       25666666666666666666664 66666666666666


Q ss_pred             ccCCchhhhhHHhhhccCCCCCc
Q psy16830        608 SYATIGGLRSHIKIVHHGLKTQQ  630 (712)
Q Consensus       608 ~f~~~~~L~~H~~~~H~~~~~~~  630 (712)
                      .|.+...|.+|++..|.+++++.
T Consensus        78 ~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           78 TFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             ECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             hhCCHHHHHHHHHHHcCCCCCCC
Confidence            66666666666665566665544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.7e-18  Score=140.66  Aligned_cols=96  Identities=18%  Similarity=0.300  Sum_probs=89.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCC
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCP  578 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~  578 (712)
                      .+++.|.++++|.|++|++.|.....|..|+++|  .+||.|++|++.|.....|..|++  |.+++     +|+|.+|+
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~--H~~~~-----~~~C~~C~   76 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES--KCEYK-----KLTCLECM   76 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH--HCSTG-----GGEEGGGT
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH--cCCCC-----CccCcccc
Confidence            5678899999999999999999999999999999  479999999999999999999994  77664     89999999


Q ss_pred             cccCCchhHHhHHh-hhcCCCcccCC
Q psy16830        579 KAFTYLGALEDHQF-VHTGQKTHLCT  603 (712)
Q Consensus       579 ~~f~~~~~L~~H~~-~H~~~k~~~C~  603 (712)
                      +.|.+...|..|++ +|+++++|.|.
T Consensus        77 ~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           77 RTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             EECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             chhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999997 99999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=5.4e-18  Score=133.74  Aligned_cols=50  Identities=22%  Similarity=0.620  Sum_probs=25.9

Q ss_pred             cccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        572 YKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      |.|.+|++.|.+...|..|+++|.++++|.|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI   51 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH
Confidence            44555555555555555555555555555555555555555555555443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.4e-17  Score=135.79  Aligned_cols=51  Identities=25%  Similarity=0.572  Sum_probs=25.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      +|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|.+...|..|+++
T Consensus        36 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A           36 PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            344444444444444444444444444455555555555555555555444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=1.6e-17  Score=133.70  Aligned_cols=80  Identities=33%  Similarity=0.795  Sum_probs=41.0

Q ss_pred             CcccCc--ccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCch
Q psy16830        536 RPFSCP--VCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIG  613 (712)
Q Consensus       536 ~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~  613 (712)
                      +||.|+  .|++.|.+...|..|++. |.++     ++|.|.+|++.|.+...|..|+++|++++||.|.+|++.|.+..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   76 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRI-HTGQ-----KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD   76 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHH-HHCC-----CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHH-hCCC-----CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHH
Confidence            444444  244444444444444443 2222     14555555555555555555555555555555555555555555


Q ss_pred             hhhhHHhh
Q psy16830        614 GLRSHIKI  621 (712)
Q Consensus       614 ~L~~H~~~  621 (712)
                      .|.+|+++
T Consensus        77 ~l~~H~~~   84 (90)
T 1a1h_A           77 ERKRHTKI   84 (90)
T ss_dssp             HHHHHHGG
T ss_pred             HHHHHHHH
Confidence            55555554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=4e-17  Score=132.79  Aligned_cols=88  Identities=30%  Similarity=0.590  Sum_probs=62.6

Q ss_pred             CCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCC--CcccCCCCccccC
Q psy16830        533 STARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQ--KTHLCTMCPASYA  610 (712)
Q Consensus       533 ~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~--k~~~C~~C~~~f~  610 (712)
                      +++++|.|++|++.|.+...|..|++. |.++     ++|.|++|++.|.+...|..|+++|+++  ++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLS-HSGE-----KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHH-SCSS-----CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHh-cCCC-----CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            355666666666666666666666665 3333     2677777777777777777787777776  7888888888888


Q ss_pred             CchhhhhHHhhhccCC
Q psy16830        611 TIGGLRSHIKIVHHGL  626 (712)
Q Consensus       611 ~~~~L~~H~~~~H~~~  626 (712)
                      +...|..|++..|.+.
T Consensus        77 ~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           77 RPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SHHHHHHHHHHTSCCC
T ss_pred             CHHHHHHHHHHhcCCC
Confidence            8888888887667653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.1e-16  Score=130.45  Aligned_cols=89  Identities=30%  Similarity=0.628  Sum_probs=60.1

Q ss_pred             cCCCCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHH
Q psy16830        315 FNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAAL  394 (712)
Q Consensus       315 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l  394 (712)
                      .++++|.|++|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|++++   +|.|++|++.|.....|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER---PFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCC---CEECSSSSCEESSHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCC---CccCCCCCCccCCHHHH
Confidence            445666677777777777677777776666666777777777766666777766666654   56677777777766677


Q ss_pred             HHHHhhhcCCCc
Q psy16830        395 EDHQFVHTGQKT  406 (712)
Q Consensus       395 ~~H~~~h~~~~~  406 (712)
                      ..|+++|+++++
T Consensus        81 ~~H~~~h~~~~~   92 (96)
T 2dmd_A           81 TVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHTTCCSCCC
T ss_pred             HHHHHHhcCCCC
Confidence            777666666543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=3e-17  Score=133.52  Aligned_cols=88  Identities=39%  Similarity=0.711  Sum_probs=46.2

Q ss_pred             CCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCch
Q psy16830        506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLG  585 (712)
Q Consensus       506 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~  585 (712)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++.++...    .++|+|++|++.|.+..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV----GKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC----CSSBCCSSSCCCBSSHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC----CCceECCCccchhCCHH
Confidence            34455555555555555555555555555555555555555555555555555433220    02455555555555555


Q ss_pred             hHHhHHh-hhcCC
Q psy16830        586 ALEDHQF-VHTGQ  597 (712)
Q Consensus       586 ~L~~H~~-~H~~~  597 (712)
                      .|..|++ +|.++
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            5555553 45443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.4e-17  Score=135.58  Aligned_cols=87  Identities=26%  Similarity=0.537  Sum_probs=72.3

Q ss_pred             hcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccC
Q psy16830        531 IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYA  610 (712)
Q Consensus       531 ~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~  610 (712)
                      .|++++||.| .|++.|.+...|..|++. |.++     ++|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSM-HLGL-----RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHH-HSCC-----CSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHH-cCCC-----cCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            4667777777 777777777777777776 3333     37889999999999999999999999999999999999999


Q ss_pred             CchhhhhHHhhhcc
Q psy16830        611 TIGGLRSHIKIVHH  624 (712)
Q Consensus       611 ~~~~L~~H~~~~H~  624 (712)
                      +...|.+|++++|.
T Consensus        77 ~~~~l~~H~~~~~~   90 (110)
T 2csh_A           77 WRDSFHRHVTSCTK   90 (110)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccc
Confidence            99999999998664

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=5e-17  Score=116.84  Aligned_cols=56  Identities=21%  Similarity=0.583  Sum_probs=52.4

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +||+|.+||++|.+.+.|..|+++|+|++||.|.+||++|.+.++|.+|+++ |+|+
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htge   58 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQNK   58 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSCC
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCCC
Confidence            6899999999999999999999999999999999999999999999999886 8775

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=1.4e-16  Score=128.12  Aligned_cols=84  Identities=32%  Similarity=0.684  Sum_probs=48.9

Q ss_pred             CCcccC--cCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHH
Q psy16830        318 GGFTCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALE  395 (712)
Q Consensus       318 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~  395 (712)
                      ++|.|+  .|++.|.....|..|+++|.++++|.|+.|++.|.+...|..|+++|++++   +|.|++|++.|.....|.
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK---PFACDICGRKFARSDERK   79 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC---CEECTTTCCEESSHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCC---CccCCCCCchhCCHHHHH
Confidence            455555  366666666666666655555555666666666666666666665555544   556666666666666666


Q ss_pred             HHHhhhcCC
Q psy16830        396 DHQFVHTGQ  404 (712)
Q Consensus       396 ~H~~~h~~~  404 (712)
                      .|+++|+++
T Consensus        80 ~H~~~H~~~   88 (90)
T 1a1h_A           80 RHTKIHLRQ   88 (90)
T ss_dssp             HHHGGGGC-
T ss_pred             HHHHHhccc
Confidence            666655554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.65  E-value=1.4e-16  Score=125.54  Aligned_cols=80  Identities=34%  Similarity=0.779  Sum_probs=42.9

Q ss_pred             cccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHHHHHh
Q psy16830        320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQF  399 (712)
Q Consensus       320 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  399 (712)
                      |.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++++   +|.|+.|++.|.....|..|++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK---PHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCC---CEECTTTSCEESSHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCC---CCcCCCcchhhCChHHHHHHHH
Confidence            4555555555555555555555555555555555555555555555555555443   4555555555555555555555


Q ss_pred             hhc
Q psy16830        400 VHT  402 (712)
Q Consensus       400 ~h~  402 (712)
                      +|+
T Consensus        79 ~H~   81 (82)
T 2kmk_A           79 KHT   81 (82)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.2e-16  Score=131.25  Aligned_cols=87  Identities=36%  Similarity=0.776  Sum_probs=61.0

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFT  582 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~  582 (712)
                      .|.++++|.| .|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|++. |.++     ++|.|.+|++.|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~   76 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-HTGI-----KPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT-TCCC-----CCEECSSSCCEES
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH-cCCC-----CCeeCCCCcchhc
Confidence            4566677777 6777777777777777777777777777777777777777777765 3333     2677777777777


Q ss_pred             CchhHHhHHhhhcC
Q psy16830        583 YLGALEDHQFVHTG  596 (712)
Q Consensus       583 ~~~~L~~H~~~H~~  596 (712)
                      +...|..|+++|.+
T Consensus        77 ~~~~l~~H~~~~~~   90 (110)
T 2csh_A           77 WRDSFHRHVTSCTK   90 (110)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccc
Confidence            77777777776653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=8.5e-17  Score=128.47  Aligned_cols=81  Identities=23%  Similarity=0.431  Sum_probs=70.1

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhcccc
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKE  649 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~  649 (712)
                      +||.|.+|++.|.+...|..|+++|++++||.|.+|++.|.+...|..|++++|                          
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~--------------------------   55 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--------------------------   55 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT--------------------------
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC--------------------------
Confidence            578999999999999999999999999999999999999999999999988744                          


Q ss_pred             ccccccccccCCCccccchhccCCCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        650 NEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       650 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                                            ..+|.|..|++.|.+...|..|++.+.
T Consensus        56 ----------------------~~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           56 ----------------------ILPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------------CCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence                                  145889999999999999999988764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.8e-16  Score=125.09  Aligned_cols=84  Identities=20%  Similarity=0.314  Sum_probs=75.1

Q ss_pred             hHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccccCCCccc
Q psy16830        586 ALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDS  665 (712)
Q Consensus       586 ~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (712)
                      +|..|+++|++++||.|.+|++.|.+...|.+|++++|...                                       
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~---------------------------------------   42 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN---------------------------------------   42 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS---------------------------------------
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc---------------------------------------
Confidence            57789999999999999999999999999999998855321                                       


Q ss_pred             cchhccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccccCCC
Q psy16830        666 KEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTF  712 (712)
Q Consensus       666 ~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F  712 (712)
                          ..+++|.|.+|++.|.+...|..|+++|.+++++.|..|+.+|
T Consensus        43 ----~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           43 ----FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ----CCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ----CCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence                1136899999999999999999999999999999999999876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=3.5e-16  Score=112.40  Aligned_cols=56  Identities=43%  Similarity=0.767  Sum_probs=30.8

Q ss_pred             CCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccC
Q psy16830        507 KDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQG  563 (712)
Q Consensus       507 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  563 (712)
                      ++||.|++||++|...+.|..|+++|++++||.|++|++.|.....|..|+++ |+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCC
Confidence            45555555555555555555555555555555555555555555555555544 444

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=7.7e-16  Score=126.51  Aligned_cols=83  Identities=31%  Similarity=0.526  Sum_probs=55.1

Q ss_pred             CCcccCc--CCcccCCchhHHhHHhhhcCCCcccCC--CCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhh
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCT--MCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDE  645 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~  645 (712)
                      ++|.|.+  |++.|.+...|..|+++|+++++|.|.  .|++.|.+...|.+|+++ |.                     
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~---------------------   71 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HT---------------------   71 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH-HT---------------------
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH-hC---------------------
Confidence            4566765  777777777777777777777777774  477777777777777655 32                     


Q ss_pred             ccccccccccccccCCCccccchhccCCCccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        646 INKENEEGATIRKVKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                                               +++||.|.+|++.|.+.+.|..|+++|.+
T Consensus        72 -------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           72 -------------------------GAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             -------------------------SCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             -------------------------CCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence                                     23566777777777777777777776653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.1e-15  Score=121.64  Aligned_cols=84  Identities=24%  Similarity=0.340  Sum_probs=66.4

Q ss_pred             HHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        524 KLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       524 ~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.+|+++|++++||.|++|++.|.....|..|++.+|....  ..++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--VPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC--CCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--CCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            356677777777888888888888888888888776565420  113799999999999999999999999999999999


Q ss_pred             CCcccc
Q psy16830        604 MCPASY  609 (712)
Q Consensus       604 ~C~~~f  609 (712)
                      .|+.+|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998865

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=3.2e-15  Score=122.76  Aligned_cols=26  Identities=27%  Similarity=0.801  Sum_probs=11.1

Q ss_pred             CCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        515 CGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       515 C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      |++.|.....|..|+++|++++||.|
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C   48 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKC   48 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEEC
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeC
Confidence            44444444444444444444333333

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=2.3e-15  Score=120.56  Aligned_cols=51  Identities=27%  Similarity=0.533  Sum_probs=29.7

Q ss_pred             CcccC--cCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        571 SYKCS--LCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       571 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      +|.|+  .|++.|.+...|..|+++|++++||.|.+|++.|.+...|..|+++
T Consensus        35 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           35 PYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR   87 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGG
T ss_pred             CcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHh
Confidence            45554  3555555555566666566666666666666666666666666554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.56  E-value=1.4e-16  Score=127.22  Aligned_cols=80  Identities=23%  Similarity=0.434  Sum_probs=54.5

Q ss_pred             CccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhH
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGAL  587 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L  587 (712)
                      +||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|++.+|.       .+|.|..|++.|.+...|
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-------LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------CcchHHHHHHHHHHHhhh
Confidence            5666777777777777777777777777777777777777777777777666552       156677777777777777


Q ss_pred             HhHHhhh
Q psy16830        588 EDHQFVH  594 (712)
Q Consensus       588 ~~H~~~H  594 (712)
                      ..|++.+
T Consensus        75 ~~H~~~~   81 (88)
T 1llm_C           75 ENEVARL   81 (88)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7776654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4.4e-15  Score=115.83  Aligned_cols=73  Identities=25%  Similarity=0.561  Sum_probs=57.5

Q ss_pred             CCCCcccCcc--cccccCChhhHHhhhhhcccCccccccCCcccCc--CCcccCCchhHHhHHhhhcCCCcccCCCCccc
Q psy16830        533 STARPFSCPV--CKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTMCPAS  608 (712)
Q Consensus       533 ~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~  608 (712)
                      +++++|.|+.  |++.|.+...|..|++..|.+++     +|.|++  |++.|.+...|..|+++|++++||.|.+|++.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~-----~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-----SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCC-----CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCC-----CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            4567777775  77777777777777774465553     788888  88888888888888888888888888888888


Q ss_pred             cC
Q psy16830        609 YA  610 (712)
Q Consensus       609 f~  610 (712)
                      |.
T Consensus        78 F~   79 (79)
T 2dlk_A           78 SG   79 (79)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=1.2e-14  Score=116.40  Aligned_cols=82  Identities=29%  Similarity=0.696  Sum_probs=55.3

Q ss_pred             CCCcccCc--CccccCChhHHHHHHHhcCCCCCccCC--cccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChH
Q psy16830        317 KGGFTCNS--CGLIFSEKKYLRNHMISHSTQKPFSCS--LCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLA  392 (712)
Q Consensus       317 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~  392 (712)
                      ..+|.|+.  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|++++   +|.|++|++.|....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR---PFQCQKCDRAFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCC---CEECSSSSCEESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCC---CccCCCCCcccCCHH
Confidence            34566666  777777777777777777666667775  47777766666777766666655   566766777776666


Q ss_pred             HHHHHHhhh
Q psy16830        393 ALEDHQFVH  401 (712)
Q Consensus       393 ~l~~H~~~h  401 (712)
                      .|..|+++|
T Consensus        80 ~l~~H~~~H   88 (89)
T 2wbs_A           80 HLALHMKRH   88 (89)
T ss_dssp             HHHHHGGGG
T ss_pred             HHHHHHHhh
Confidence            666666665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.9e-15  Score=120.16  Aligned_cols=73  Identities=16%  Similarity=0.279  Sum_probs=57.7

Q ss_pred             hcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccccCCCccccchhccCC
Q psy16830        594 HTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPHEDSKEYMALNK  673 (712)
Q Consensus       594 H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  673 (712)
                      -+|++||.|.+|++.|.+++.|.+|+++.|.+.                                           .+++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-------------------------------------------~~ek   49 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-------------------------------------------VLNS   49 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC-------------------------------------------CCSC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-------------------------------------------CCCC
Confidence            467888888888888888888888887556331                                           2357


Q ss_pred             CccCChhhhhhhChHHHHhH-HhhhcCCCcccccccc
Q psy16830        674 PFKCDDCDQRFLTKILLNKH-KLLHFDKDYFSCNYCG  709 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H-~~~H~~~~~~~C~~C~  709 (712)
                      ||.|++||++|.+.+.|..| +++|++++||.|.++.
T Consensus        50 pf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           50 SYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            78888888888888888888 7888888888888754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=6.2e-15  Score=114.94  Aligned_cols=69  Identities=33%  Similarity=0.655  Sum_probs=44.4

Q ss_pred             CCCCCCcc--hhhhhcchhhHhhccc-cccCCCccccCC--CCcccCChHHHhhhhhhcCCCCcccCccccccc
Q psy16830        479 NKPFKCDD--CDQRFLTKILLNKHKL-LHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQF  547 (712)
Q Consensus       479 ~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f  547 (712)
                      +++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+++|++++||.|++|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            45566654  6666666666666666 566666666666  666666666666666666666666666666665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-14  Score=112.84  Aligned_cols=58  Identities=28%  Similarity=0.547  Sum_probs=54.8

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK  627 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  627 (712)
                      ++|.|++|++.|.+...|..|+++|++++||.|.+|++.|.++..|.+|++..|++++
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            5799999999999999999999999999999999999999999999999988897753

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=3.4e-15  Score=129.02  Aligned_cols=108  Identities=13%  Similarity=0.213  Sum_probs=51.9

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhh---cCCCCcccCcccccccC------ChhhHHhhhhhcccCccccccCCcc
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVI---HSTARPFSCPVCKKQFK------RKQDVAGHDRVVHQGKKLIVYKSYK  573 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~---H~~~~p~~C~~C~~~f~------~~~~l~~H~~~~h~~~~~~~~~~~~  573 (712)
                      ++.+.++|.|...+.....  .+..|.+.   ...++++.|++|.+.|.      ....|..|++  |.++     +||.
T Consensus         6 ~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~--h~~~-----~~~~   76 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--SKAI-----SQFV   76 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH--HHHH-----CSEE
T ss_pred             hcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH--hCCC-----CCeE
Confidence            4556666666665443221  22222111   12234556666555443      3334444442  2222     2555


Q ss_pred             cCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        574 CSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       574 C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      |.+|++.|.....|..|+++|  ++||.|.+|++.|.+.+.|.+|+++
T Consensus        77 C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           77 CPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             CTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            555555555555555555555  4555555555555555555555554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=1.7e-14  Score=114.38  Aligned_cols=77  Identities=27%  Similarity=0.511  Sum_probs=48.0

Q ss_pred             cccC--cccccccCChhhHHhhhhhcccCccccccCCcccCc--CCcccCCchhHHhHHhhhcCCCcccCCC---Ccccc
Q psy16830        537 PFSC--PVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTM---CPASY  609 (712)
Q Consensus       537 p~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~~---C~~~f  609 (712)
                      ||.|  +.|++.|.+...|..|++. |.++     ++|+|++  |++.|.+...|..|+++|++   |.|.+   |++.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f   71 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQ-----LPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVG   71 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-HHTT-----CCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-hCCC-----CCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCcc
Confidence            3555  5555555555555555554 3332     2566666  66667677777777777766   77777   77777


Q ss_pred             CCchhhhhHHhhh
Q psy16830        610 ATIGGLRSHIKIV  622 (712)
Q Consensus       610 ~~~~~L~~H~~~~  622 (712)
                      .+...|..|++++
T Consensus        72 ~~~~~l~~H~~~h   84 (85)
T 2j7j_A           72 KTWTLYLKHVAEC   84 (85)
T ss_dssp             SSHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHhc
Confidence            7777777776663

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.2e-14  Score=118.36  Aligned_cols=79  Identities=23%  Similarity=0.392  Sum_probs=50.3

Q ss_pred             ccCCchhHHhHHhhhcCCCcccCCCCccccC-CchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccc
Q psy16830        580 AFTYLGALEDHQFVHTGQKTHLCTMCPASYA-TIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRK  658 (712)
Q Consensus       580 ~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~-~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~  658 (712)
                      .+.....+..|+++|+++++|.|.+|++.|. +...|.+|+++++ +                                 
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~-~---------------------------------   50 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ-K---------------------------------   50 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH-H---------------------------------
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc-C---------------------------------
Confidence            3445556666667777777777777777776 6777777766522 1                                 


Q ss_pred             cCCCccccchhccCCCccCChhhhhhhChHHHHhHHhhhcCCCccc
Q psy16830        659 VKPHEDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFS  704 (712)
Q Consensus       659 ~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  704 (712)
                                  .++||.|.+|++.|.+...|..|+++|++++|+.
T Consensus        51 ------------~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           51 ------------LQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             ------------HHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             ------------CCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence                        0245667777777777777777777766666644

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=5.4e-14  Score=111.42  Aligned_cols=76  Identities=29%  Similarity=0.635  Sum_probs=39.3

Q ss_pred             ccc--CcCccccCChhHHHHHHHhcCCCCCccCCc--ccccccChHHHHHHHHHhcCCCCCCceecCC---ChhhccChH
Q psy16830        320 FTC--NSCGLIFSEKKYLRNHMISHSTQKPFSCSL--CGKRFKRENGVINHQRLHQTKKVYKSYKCSL---CPRVFTHLA  392 (712)
Q Consensus       320 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~---C~~~f~~~~  392 (712)
                      |.|  +.|++.|.....|..|+++|+++++|.|+.  |++.|.+...|..|+++|++      |.|+.   |++.|....
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS------EECCSCSSCCCEESSHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC------CCCCCCCCCCCccCCHH
Confidence            445  455555555555555555555555555544  55555555555555555443      44555   555555555


Q ss_pred             HHHHHHhhh
Q psy16830        393 ALEDHQFVH  401 (712)
Q Consensus       393 ~l~~H~~~h  401 (712)
                      .|..|+++|
T Consensus        76 ~l~~H~~~h   84 (85)
T 2j7j_A           76 LYLKHVAEC   84 (85)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            555555444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.8e-14  Score=116.31  Aligned_cols=69  Identities=23%  Similarity=0.291  Sum_probs=47.8

Q ss_pred             CCCCcccCcccccccCChhhHHhhhhhccc---CccccccCCcccCcCCcccCCchhHHhH-HhhhcCCCcccCCCCc
Q psy16830        533 STARPFSCPVCKKQFKRKQDVAGHDRVVHQ---GKKLIVYKSYKCSLCPKAFTYLGALEDH-QFVHTGQKTHLCTMCP  606 (712)
Q Consensus       533 ~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~---~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~k~~~C~~C~  606 (712)
                      +|++||.|+.|++.|.....|..|++..|.   ++     +||.|.+||+.|.....|..| +++|+|++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~e-----kpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLN-----SSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCS-----CCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCC-----CCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            466667777777777777777777664452   23     367777777777777777777 6777777788777644

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6e-14  Score=108.53  Aligned_cols=64  Identities=30%  Similarity=0.631  Sum_probs=51.0

Q ss_pred             ccCCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        477 ALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       477 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      .++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3457788888888888888888888888888888888888888888888888888888888776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.7e-15  Score=116.25  Aligned_cols=71  Identities=23%  Similarity=0.284  Sum_probs=59.2

Q ss_pred             hHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCccc
Q psy16830        522 KYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHL  601 (712)
Q Consensus       522 ~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~  601 (712)
                      ...|..|+++|++++||.|++|++.|.+...|..        +     ++|.|++|++.|.....|..|+++|+|++||.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~-----~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------R-----KTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------S-----SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------C-----CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            4567778888888888888888888887777765        1     47999999999999999999999999999999


Q ss_pred             CCCC
Q psy16830        602 CTMC  605 (712)
Q Consensus       602 C~~C  605 (712)
                      |++|
T Consensus        70 C~~C   73 (73)
T 2ctu_A           70 PSSG   73 (73)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9887

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6.4e-14  Score=112.78  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=21.2

Q ss_pred             ccCCchhHHhHHhhhcCCCcccCCCCcccc-CCchhhhhHHhh
Q psy16830        580 AFTYLGALEDHQFVHTGQKTHLCTMCPASY-ATIGGLRSHIKI  621 (712)
Q Consensus       580 ~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f-~~~~~L~~H~~~  621 (712)
                      +|.....|..|+++|+++++|.|.+|++.| .+...|..|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~   57 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN   57 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH
Confidence            334444455555555555555555555555 455555555444

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=6.5e-14  Score=108.34  Aligned_cols=64  Identities=38%  Similarity=0.676  Sum_probs=31.8

Q ss_pred             CCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        533 STARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       533 ~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      .+++||.|++|++.|.....|..|++. |.++     ++|.|++|++.|.....|..|+++|++++||+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRT-HTGE-----KPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS-----CSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHH-cCCC-----cCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444444444444444443 2222     245555555555555555555555555555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.2e-14  Score=115.03  Aligned_cols=74  Identities=18%  Similarity=0.256  Sum_probs=34.3

Q ss_pred             ChHHHhhhhhhcCCCCcccCcccccccC-ChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCc
Q psy16830        521 HKYKLRRHIVIHSTARPFSCPVCKKQFK-RKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKT  599 (712)
Q Consensus       521 ~~~~L~~H~~~H~~~~p~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  599 (712)
                      ....+..|+++|++++||.|++|++.|. ....|..|++.++.+++     +|.|.+|++.|.+...|..|+++|++++|
T Consensus         8 ~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~-----~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQD-----ALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHH-----HHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCC-----CEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3344445555555555555544444444 44444444444222121     44444444444444444444444444444

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.4e-15  Score=114.48  Aligned_cols=72  Identities=19%  Similarity=0.279  Sum_probs=65.5

Q ss_pred             CchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCCccccCCCCCCccchhhccccccccccccccCCC
Q psy16830        583 YLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQQSCQSSHESKTCSVDEINKENEEGATIRKVKPH  662 (712)
Q Consensus       583 ~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  662 (712)
                      +...|..|+++|++++||.|.+|++.|.+...|..                                             
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------------------------------------------   36 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------------------------------------------   36 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------------------------------------------
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------------------------------------------
Confidence            45678999999999999999999999998877765                                             


Q ss_pred             ccccchhccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        663 EDSKEYMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       663 ~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                               +++|.|++||+.|.+.+.|..|+++|.++++|.|++|
T Consensus        37 ---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 ---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             ---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             ---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence                     1579999999999999999999999999999999988

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=5.2e-14  Score=109.26  Aligned_cols=64  Identities=23%  Similarity=0.446  Sum_probs=52.3

Q ss_pred             cccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCc
Q psy16830        501 KLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGK  564 (712)
Q Consensus       501 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  564 (712)
                      +..+.+.++|.|++||+.|.+...|.+|+++|++++||.|++|++.|.+...|..|++..|.++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3455667788888888888888888888888888888888888888888888888887777765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.5e-13  Score=106.25  Aligned_cols=68  Identities=25%  Similarity=0.466  Sum_probs=45.1

Q ss_pred             HhhccccccCCCccccCCCCcccCChHHHhhhhh-hcCCC-CcccCcccccccCChhhHHhhhhhcccCc
Q psy16830        497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIV-IHSTA-RPFSCPVCKKQFKRKQDVAGHDRVVHQGK  564 (712)
Q Consensus       497 L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  564 (712)
                      |.+|+++|.++++|.|++|++.|.....|..|++ .|.++ +||.|++|++.|.+...|..|++.+|..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4566777777777777777777777777777765 45543 56666666666666666666666666544

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.40  E-value=3.4e-14  Score=122.63  Aligned_cols=112  Identities=18%  Similarity=0.280  Sum_probs=69.7

Q ss_pred             cCCCCCccCccChh--ccCCHHHHHHhHhhcCCCCCcCcchhHhhc------CHHHHHHHHhhcCCCCCccccccccccC
Q psy16830         92 VALNKPFKCDDCDQ--CFLTKILLNKHKLLHTEGHLTCNLCGQTFR------QKFRLLNHMISHSTEKPFSCPICKKQFK  163 (712)
Q Consensus        92 ~~~~~~~~C~~C~~--~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~  163 (712)
                      ..+.++|.|...+.  .|.....+..|.....+..+.|++|++.|.      ....|..|+ .|++++||.|++|++.|.
T Consensus         7 ~~~~k~~~~~~k~~~~~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~   85 (129)
T 2wbt_A            7 DSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFS   85 (129)
T ss_dssp             CTTCCGGGGCSSCEEEECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEES
T ss_pred             cccccccccccCCeeeeecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccC
Confidence            34568888876543  343333333344333455678999888776      444555555 466667777777777777


Q ss_pred             ChhhhhccccccccCcccccccceecCCcccccCChHHHHHHHHHhcCC
Q psy16830        164 RKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVHTGQ  212 (712)
Q Consensus       164 ~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  212 (712)
                      ....|..|+++ | .      ++|.|.+|++.|.....|..|+++|++.
T Consensus        86 ~~~~l~~H~~~-H-~------~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           86 SSVSLKQHIRY-T-E------HTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SHHHHHHHHHH-T-C------CCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHhHHHHHHHH-C-C------CCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            77777766665 3 1      3566666666666666666666666653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=1.7e-13  Score=105.01  Aligned_cols=62  Identities=37%  Similarity=0.737  Sum_probs=51.0

Q ss_pred             ccCCCCCCcchhhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcc
Q psy16830        477 ALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPF  538 (712)
Q Consensus       477 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~  538 (712)
                      .++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34677888888888888888888888888888888888888888888888888888888775

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.38  E-value=2.5e-13  Score=98.01  Aligned_cols=54  Identities=35%  Similarity=0.487  Sum_probs=49.9

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      ++|+|.+|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++++|
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            589999999999999999999999999999999999999999999999999865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=3.7e-13  Score=103.07  Aligned_cols=58  Identities=41%  Similarity=0.846  Sum_probs=43.6

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKT  628 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  628 (712)
                      ++|+|.+|++.|.+...|..|+++|++++||+|.+|++.|.+...|.+|+++ |.++++
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   73 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI-HSGEKP   73 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH-HCCSCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh-cCCCCC
Confidence            4677777777777777777777777777777777777777777777777766 666554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.3e-13  Score=98.53  Aligned_cols=57  Identities=28%  Similarity=0.568  Sum_probs=53.1

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +||.|.+|++.|.+...|..|+++|++++||.|.+|++.|.+...|.+|++..|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            479999999999999999999999999999999999999999999999987778764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3e-13  Score=104.57  Aligned_cols=57  Identities=26%  Similarity=0.496  Sum_probs=34.9

Q ss_pred             CcccCcCCcccCCchhHHhHHh-hhcCC-CcccCCCCccccCCchhhhhHHhhhccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQF-VHTGQ-KTHLCTMCPASYATIGGLRSHIKIVHHGLK  627 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~-~H~~~-k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  627 (712)
                      +|.|.+|++.|.+...|..|++ .|.++ ++|+|.+|++.|.+...|.+|++++|.+..
T Consensus        15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A           15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            5555566666666666666654 45543 566666666666666666666666565443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.35  E-value=6.4e-13  Score=95.85  Aligned_cols=53  Identities=30%  Similarity=0.489  Sum_probs=48.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      ||.|.+|++.|.+...|..|+++|++++||.|.+|++.|.+...|.+|+++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            58899999999999999999999999999999999999999999999998743

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=6.3e-13  Score=101.11  Aligned_cols=59  Identities=27%  Similarity=0.639  Sum_probs=34.7

Q ss_pred             cccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        501 KLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       501 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      .++|.++++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            34555566666666666666666666666666655555555555555555555555554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=7.8e-13  Score=100.00  Aligned_cols=58  Identities=26%  Similarity=0.443  Sum_probs=47.5

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKT  628 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  628 (712)
                      ++|+|.+|++.|.+...|..|+++|++++||.|.+|++.|.+...|.+|+++ |+++++
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~p   65 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDMS   65 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHH-HHSSSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHH-HhCCCC
Confidence            4788888888888888888888888888888888888888888888888877 444443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=7.9e-13  Score=100.57  Aligned_cols=54  Identities=39%  Similarity=0.684  Sum_probs=40.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|.+|++.|.+...|.+|+++ |++
T Consensus        14 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~   67 (72)
T 1x6e_A           14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI-HTS   67 (72)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH-HHS
T ss_pred             CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh-cCC
Confidence            677777777777777777777777777777777777777777777777776 444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.9e-12  Score=104.04  Aligned_cols=71  Identities=25%  Similarity=0.476  Sum_probs=37.9

Q ss_pred             hccCHHHHHHHHHhhccCCCCcccCcCcccc-CChhHHHHHHHhcCCCCCccCCcccccccChHHHHHH-HHHhc
Q psy16830        299 CFLSKILLNQHKKQMHFNKGGFTCNSCGLIF-SEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINH-QRLHQ  371 (712)
Q Consensus       299 ~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  371 (712)
                      .|.....|..|++. |.++++|.|+.|++.| .....|..|+++| +++||.|.+|++.|.....|..| +++|.
T Consensus        15 ~~~~~~~~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           15 VYAAGSLEEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             SSCTTCHHHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCchHHHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            34444455555443 4445555555555555 5555555555555 55555555555555555555555 44443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.4e-12  Score=101.11  Aligned_cols=60  Identities=18%  Similarity=0.329  Sum_probs=54.3

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcC---CCcccCCCCccccCCchhhhhHHhhhccCCCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTG---QKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ  629 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~---~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  629 (712)
                      ++|+|.+|++.|.....|..|+++|++   +++|.|.+|++.|.+...|.+|++.+|.+..+.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            489999999999999999999999986   899999999999999999999998889876654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.1e-12  Score=97.80  Aligned_cols=59  Identities=27%  Similarity=0.729  Sum_probs=32.2

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhh-c-CCCCcccCcccccccCChhhHHhhhhhcc
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVI-H-STARPFSCPVCKKQFKRKQDVAGHDRVVH  561 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H-~~~~p~~C~~C~~~f~~~~~l~~H~~~~h  561 (712)
                      +|.++++|.|+.|++.|.+...|..|+++ | .+++||.|++|++.|.+...|..|++.+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            45555555555555555555555555554 4 34555555555555555555555555433

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=4.4e-12  Score=95.78  Aligned_cols=62  Identities=24%  Similarity=0.403  Sum_probs=47.3

Q ss_pred             ccCCCCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCC
Q psy16830        314 HFNKGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKV  375 (712)
Q Consensus       314 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  375 (712)
                      |.++++|.|+.|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            56677777777777777777777777777777777777777777777777777777777653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.4e-12  Score=97.39  Aligned_cols=54  Identities=24%  Similarity=0.674  Sum_probs=43.5

Q ss_pred             CCcccCcCCcccCCchhHHhHHhh-h-cCCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFV-H-TGQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~-H-~~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      ++|.|++|++.|.+...|..|+++ | .+++||.|++|++.|.+.+.|..|++++|
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            378888888888888888888877 6 57888888888888888888888887755

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=4.2e-12  Score=91.50  Aligned_cols=55  Identities=25%  Similarity=0.622  Sum_probs=35.1

Q ss_pred             CCCcccCcCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhc
Q psy16830        317 KGGFTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQ  371 (712)
Q Consensus       317 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  371 (712)
                      +++|.|+.|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3556666666666666666666666666666666666666666666666666665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=3.8e-12  Score=92.81  Aligned_cols=57  Identities=28%  Similarity=0.768  Sum_probs=39.5

Q ss_pred             CccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhhcccCc
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGK  564 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  564 (712)
                      +||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|++..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            356777777777777777777777777777777777777777777777765445543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2.6e-12  Score=98.05  Aligned_cols=66  Identities=26%  Similarity=0.519  Sum_probs=55.1

Q ss_pred             hhHHhhhhhcccCccccccCCcccC--cCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        551 QDVAGHDRVVHQGKKLIVYKSYKCS--LCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       551 ~~l~~H~~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      ..+..|....|.+++     +|.|+  .|++.|.....|..|+++|++++||.|.+|++.|.+...|.+|+++
T Consensus         4 ~~~~~~~~~~~~~~~-----~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMR-----PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             ----CTTSCCCCCCC-----CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCccchhhccCCCCC-----ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            346667777777664     89997  5999999999999999999999999999999999999999999876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.25  E-value=4e-12  Score=91.59  Aligned_cols=51  Identities=29%  Similarity=0.675  Sum_probs=28.1

Q ss_pred             ccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            355555555555555555555555555555555555555555555555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=3e-12  Score=99.13  Aligned_cols=61  Identities=30%  Similarity=0.502  Sum_probs=38.9

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhhhcCC---CCcccCcccccccCChhhHHhhhhhcccCc
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHST---ARPFSCPVCKKQFKRKQDVAGHDRVVHQGK  564 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~---~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  564 (712)
                      |.++++|.|++|++.|.....|..|+++|++   ++||.|++|++.|.....|..|++.+|.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            5566666666666666666666666666664   566666666666666666666665555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=2.1e-11  Score=98.54  Aligned_cols=71  Identities=25%  Similarity=0.300  Sum_probs=56.3

Q ss_pred             CCccccCCCCcccCChHHHhhhhhh-cCCCCcccCcccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCch
Q psy16830        507 KDYFSCNYCGKTFLHKYKLRRHIVI-HSTARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLG  585 (712)
Q Consensus       507 ~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~  585 (712)
                      ...|.|+.|++.|.....|..|+++ |.+++|..+..|                          ++|.|.+|++.|.+..
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------------~~~~C~~C~k~f~~~~   76 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------------YWEECPREGKSFKAKY   76 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------------CCTTCSSTTCCCSSHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------------eccCCCCCCcccCCHH
Confidence            3446788888888888888888876 777666443333                          1488999999999999


Q ss_pred             hHHhHHhhhcCCCcccCC
Q psy16830        586 ALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       586 ~L~~H~~~H~~~k~~~C~  603 (712)
                      .|..|+++|+|++||.|.
T Consensus        77 ~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           77 KLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHhcCCCCCCCCC
Confidence            999999999999999986

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=1.4e-11  Score=99.53  Aligned_cols=62  Identities=29%  Similarity=0.382  Sum_probs=57.9

Q ss_pred             CCCCCcchhhhhcchhhHhhcccc-ccCCCc--------cccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        480 KPFKCDDCDQRFLTKILLNKHKLL-HFDKDY--------FSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       480 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      ..|.|..|++.|.....|..|++. |.+.++        |.|++|++.|.....|..|+++|++++||.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457899999999999999999998 888877        99999999999999999999999999999996

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-11  Score=82.57  Aligned_cols=45  Identities=29%  Similarity=0.432  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            578888888999999999999999999999999999999998887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=2.4e-11  Score=82.93  Aligned_cols=45  Identities=22%  Similarity=0.262  Sum_probs=40.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.14  E-value=3e-11  Score=82.40  Aligned_cols=45  Identities=18%  Similarity=0.288  Sum_probs=38.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            578888888888888888888888888888888888888888877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.9e-11  Score=82.51  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=40.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.14  E-value=2.7e-11  Score=82.61  Aligned_cols=45  Identities=20%  Similarity=0.359  Sum_probs=39.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588888888899999999999999999999989988889988877

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=1.3e-11  Score=94.06  Aligned_cols=65  Identities=31%  Similarity=0.598  Sum_probs=46.5

Q ss_pred             HHHHHHhhccCCCCcccC--cCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHh
Q psy16830        306 LNQHKKQMHFNKGGFTCN--SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH  370 (712)
Q Consensus       306 l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  370 (712)
                      |..|+...|.++++|.|+  .|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            344555567777777776  47777777777777777777777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.3e-11  Score=82.21  Aligned_cols=45  Identities=27%  Similarity=0.383  Sum_probs=40.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488889999999999999999999999999999999999999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=82.51  Aligned_cols=45  Identities=24%  Similarity=0.419  Sum_probs=40.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=82.51  Aligned_cols=45  Identities=22%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=82.11  Aligned_cols=45  Identities=22%  Similarity=0.289  Sum_probs=39.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578888888889999999999999999999888888888888877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.1e-11  Score=82.32  Aligned_cols=45  Identities=24%  Similarity=0.507  Sum_probs=39.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588888888899999999999999999999889988889988877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3e-11  Score=82.36  Aligned_cols=45  Identities=22%  Similarity=0.339  Sum_probs=40.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.2e-11  Score=82.30  Aligned_cols=45  Identities=24%  Similarity=0.428  Sum_probs=40.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.2e-11  Score=82.26  Aligned_cols=45  Identities=22%  Similarity=0.359  Sum_probs=39.1

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            578888888888888888888888888888888888888888877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.13  E-value=3e-11  Score=82.40  Aligned_cols=45  Identities=24%  Similarity=0.418  Sum_probs=40.1

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588888889999999999999999999999999999999998877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.1e-11  Score=82.34  Aligned_cols=45  Identities=24%  Similarity=0.399  Sum_probs=40.0

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588888889999999999999999999999999999999998887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=82.07  Aligned_cols=45  Identities=24%  Similarity=0.340  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588888888899999999999999999999999999899988877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3e-11  Score=82.44  Aligned_cols=45  Identities=24%  Similarity=0.383  Sum_probs=40.3

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889899999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.9e-11  Score=81.87  Aligned_cols=45  Identities=29%  Similarity=0.443  Sum_probs=39.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578888888889999999999999999999888888888888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3e-11  Score=82.43  Aligned_cols=45  Identities=24%  Similarity=0.428  Sum_probs=40.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=82.21  Aligned_cols=45  Identities=20%  Similarity=0.397  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588888888899999999999999999999999998889988887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.4e-11  Score=82.14  Aligned_cols=45  Identities=29%  Similarity=0.442  Sum_probs=40.1

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            588888889999999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.1e-11  Score=82.35  Aligned_cols=45  Identities=24%  Similarity=0.397  Sum_probs=40.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.9e-11  Score=81.87  Aligned_cols=45  Identities=27%  Similarity=0.429  Sum_probs=40.0

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588888888999999999999999999999999999999998887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=82.93  Aligned_cols=45  Identities=20%  Similarity=0.264  Sum_probs=39.0

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++||+.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            588888888888888888888888888888888888888888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.4e-11  Score=81.22  Aligned_cols=44  Identities=23%  Similarity=0.279  Sum_probs=39.0

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      |+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67888888999999999999999999999999999999998877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.5e-11  Score=81.51  Aligned_cols=45  Identities=24%  Similarity=0.365  Sum_probs=39.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478888889999999999999999999999999999999998877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.9e-11  Score=81.85  Aligned_cols=45  Identities=20%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.7e-11  Score=81.97  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=40.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.8e-11  Score=81.36  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=38.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.8e-11  Score=81.90  Aligned_cols=45  Identities=22%  Similarity=0.390  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578888888999999999999999999999999999999998877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=82.50  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=39.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588888888899999999999999999999999988889988877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.7e-11  Score=81.43  Aligned_cols=45  Identities=20%  Similarity=0.400  Sum_probs=40.3

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.11  E-value=4.6e-11  Score=81.50  Aligned_cols=45  Identities=22%  Similarity=0.342  Sum_probs=40.1

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588888889999999999999999999999999999999998887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=82.48  Aligned_cols=45  Identities=27%  Similarity=0.355  Sum_probs=39.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588888888899999999999999999999989988889988877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.11  E-value=4e-11  Score=81.78  Aligned_cols=45  Identities=22%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478888888888888888888888888888888888888888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.1e-11  Score=81.24  Aligned_cols=45  Identities=24%  Similarity=0.335  Sum_probs=39.3

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478888888889999999999999999999888888888888877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=82.04  Aligned_cols=45  Identities=20%  Similarity=0.204  Sum_probs=39.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++||+.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578888888899999999999999999999988988888888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=82.27  Aligned_cols=45  Identities=24%  Similarity=0.424  Sum_probs=38.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578888888888888888888888888888888888888888877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.4e-11  Score=81.11  Aligned_cols=45  Identities=22%  Similarity=0.359  Sum_probs=40.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999998875

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.1e-11  Score=81.23  Aligned_cols=45  Identities=22%  Similarity=0.405  Sum_probs=40.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            488889999999999999999999999999999999999999887

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.9e-11  Score=89.21  Aligned_cols=53  Identities=21%  Similarity=0.493  Sum_probs=44.8

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCC-CCccccCCchhhhhHHhhhccC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT-MCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~-~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      ++|.|.+|++.|. ...|..|+++ ++++||.|. .|++.|..++.|.+|+++ |..
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~-hc~   62 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD-SCN   62 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT-TSS
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh-hcc
Confidence            5788888888888 8888888888 888888888 888888888888888876 543

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.09  E-value=6.5e-11  Score=80.68  Aligned_cols=45  Identities=20%  Similarity=0.320  Sum_probs=40.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478888899999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.5e-11  Score=81.53  Aligned_cols=45  Identities=27%  Similarity=0.369  Sum_probs=40.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.7e-11  Score=80.98  Aligned_cols=45  Identities=18%  Similarity=0.255  Sum_probs=40.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.5e-11  Score=80.69  Aligned_cols=45  Identities=22%  Similarity=0.293  Sum_probs=40.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478888899999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=81.10  Aligned_cols=45  Identities=20%  Similarity=0.301  Sum_probs=38.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=4.3e-11  Score=84.74  Aligned_cols=44  Identities=23%  Similarity=0.390  Sum_probs=41.9

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHh-hhcCCCccccccccCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKL-LHFDKDYFSCNYCGKTF  712 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~F  712 (712)
                      +.+++||.|++|++.|.+...|..|++ +|.++++|.|.+|+++|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F   51 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP   51 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            567899999999999999999999997 99999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-10  Score=80.14  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=38.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhh-hcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIV-IHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|++ +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47888888888888888888888888888888 8888888888877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.5e-11  Score=80.37  Aligned_cols=45  Identities=16%  Similarity=0.241  Sum_probs=39.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478888889999999999999999999999999999999999887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=5.9e-11  Score=81.72  Aligned_cols=42  Identities=26%  Similarity=0.373  Sum_probs=40.1

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccccC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGK  710 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  710 (712)
                      +.++++|.|.+|++.|.+...|..|+++|++++||.|.+|||
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567899999999999999999999999999999999999997

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=79.28  Aligned_cols=45  Identities=24%  Similarity=0.423  Sum_probs=40.3

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488889999999999999999999999999999999999999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.03  E-value=3.1e-11  Score=88.21  Aligned_cols=56  Identities=14%  Similarity=0.402  Sum_probs=43.3

Q ss_pred             HhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHh
Q psy16830        497 LNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAG  555 (712)
Q Consensus       497 L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~  555 (712)
                      |..|+++|.+++||.|++||+.|.....|.   ++|++++||.|++|++.|....++..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            567888888888888888888888777776   67888888888888888876665543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.7e-10  Score=81.66  Aligned_cols=47  Identities=28%  Similarity=0.475  Sum_probs=38.8

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhh-hcCCCCcccCcccccccCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIV-IHSTARPFSCPVCKKQFKR  549 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~~C~~~f~~  549 (712)
                      .|.++++|.|++|++.|.....|.+|++ +|++++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4667788888888888888888888886 8888888888888888865

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.6e-11  Score=88.79  Aligned_cols=52  Identities=27%  Similarity=0.557  Sum_probs=28.5

Q ss_pred             CCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc-ccccccCChhhHHhhhhh
Q psy16830        506 DKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP-VCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       506 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~-~C~~~f~~~~~l~~H~~~  559 (712)
                      +.+||.|++|++.|. ...|..|+++ ++++||.|+ .|++.|..+..|..|++.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            344555555555555 5555555555 555555555 555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=77.89  Aligned_cols=44  Identities=27%  Similarity=0.445  Sum_probs=38.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58888989999999999999999999999999999999998864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=77.92  Aligned_cols=44  Identities=27%  Similarity=0.431  Sum_probs=38.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58888889999999999999999999999999999999998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=78.01  Aligned_cols=44  Identities=25%  Similarity=0.388  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=77.54  Aligned_cols=44  Identities=23%  Similarity=0.408  Sum_probs=38.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58888888999999999999999999999999999999998864

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=1.9e-10  Score=87.31  Aligned_cols=52  Identities=31%  Similarity=0.554  Sum_probs=48.6

Q ss_pred             CCcccCc--CCcccCCchhHHhHHhhhcCCCcccCCC--CccccCCchhhhhHHhh
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKI  621 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~  621 (712)
                      ++|.|.+  |++.|.....|..|+++|++++||+|.+  |++.|.....|.+|+++
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            5899988  9999999999999999999999999975  99999999999999875

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.8e-10  Score=77.50  Aligned_cols=44  Identities=32%  Similarity=0.452  Sum_probs=39.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999999999999999864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.00  E-value=2e-10  Score=78.18  Aligned_cols=44  Identities=25%  Similarity=0.384  Sum_probs=39.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=77.62  Aligned_cols=44  Identities=25%  Similarity=0.437  Sum_probs=38.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888888999999999999999999999999999999998864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.99  E-value=2.6e-10  Score=75.89  Aligned_cols=42  Identities=24%  Similarity=0.295  Sum_probs=37.4

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678888899999999999999999999999999999999884

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.5e-10  Score=77.71  Aligned_cols=44  Identities=27%  Similarity=0.442  Sum_probs=38.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            57888888999999999999999999999999999999998864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=77.55  Aligned_cols=44  Identities=30%  Similarity=0.505  Sum_probs=39.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58888999999999999999999999999999999999999864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=77.90  Aligned_cols=44  Identities=20%  Similarity=0.363  Sum_probs=39.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=77.94  Aligned_cols=44  Identities=25%  Similarity=0.381  Sum_probs=39.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999864

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.99  E-value=2.4e-10  Score=77.80  Aligned_cols=35  Identities=40%  Similarity=0.562  Sum_probs=28.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           12 PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788888888888888888888888888888776

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=1.5e-10  Score=78.44  Aligned_cols=42  Identities=26%  Similarity=0.239  Sum_probs=39.9

Q ss_pred             hhccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccccc
Q psy16830        668 YMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCG  709 (712)
Q Consensus       668 ~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  709 (712)
                      .+.+++||.|++|++.|...+.|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            367889999999999999999999999999999999999997

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3e-10  Score=77.32  Aligned_cols=44  Identities=20%  Similarity=0.464  Sum_probs=38.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57888889999999999999999999999999999999998864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.7e-10  Score=77.61  Aligned_cols=44  Identities=23%  Similarity=0.292  Sum_probs=39.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999999999999999864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3e-10  Score=77.33  Aligned_cols=44  Identities=27%  Similarity=0.445  Sum_probs=38.9

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888889999999999999999999999999999999998864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=77.83  Aligned_cols=35  Identities=37%  Similarity=0.555  Sum_probs=26.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.9e-10  Score=77.40  Aligned_cols=44  Identities=25%  Similarity=0.429  Sum_probs=39.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999864

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.98  E-value=2.5e-10  Score=77.73  Aligned_cols=35  Identities=31%  Similarity=0.493  Sum_probs=25.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|++|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           12 TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            67777777777777777777777777777777766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=78.21  Aligned_cols=35  Identities=37%  Similarity=0.608  Sum_probs=27.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|++|++.|.....|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           12 PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            67777777777777788888888888888888776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=77.87  Aligned_cols=35  Identities=31%  Similarity=0.553  Sum_probs=27.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|++|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           12 PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777778888888888888888888888888776

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=76.96  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=38.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            37788888999999999999999999999999999999998864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.3e-10  Score=77.14  Aligned_cols=44  Identities=25%  Similarity=0.427  Sum_probs=39.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.7e-10  Score=75.14  Aligned_cols=42  Identities=29%  Similarity=0.414  Sum_probs=37.0

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478888888999999999999999999999999999988887

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.6e-10  Score=77.59  Aligned_cols=44  Identities=23%  Similarity=0.291  Sum_probs=39.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48888999999999999999999999999999999999999864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.97  E-value=3.1e-10  Score=77.25  Aligned_cols=35  Identities=34%  Similarity=0.529  Sum_probs=28.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788888888888888888888888888888776

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.9e-10  Score=75.03  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=36.8

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      |+++|.++++|.|++|++.|...+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            677888888999999999999999999999999998888874

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.4e-10  Score=77.06  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=38.6

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      ++++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46778888899999999999999999999999999999998887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.97  E-value=1.9e-10  Score=78.37  Aligned_cols=35  Identities=37%  Similarity=0.492  Sum_probs=26.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           12 PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.5e-10  Score=77.75  Aligned_cols=35  Identities=40%  Similarity=0.579  Sum_probs=28.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           12 PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67778888888888888888888888888888776

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=77.11  Aligned_cols=44  Identities=30%  Similarity=0.412  Sum_probs=39.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57888999999999999999999999999999999999999864

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=78.33  Aligned_cols=35  Identities=26%  Similarity=0.325  Sum_probs=27.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+.+.|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           12 PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67777777777777777788777888888887776

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.6e-10  Score=76.10  Aligned_cols=43  Identities=26%  Similarity=0.257  Sum_probs=37.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5788888888999999999999999999999999888888884

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=77.17  Aligned_cols=35  Identities=40%  Similarity=0.593  Sum_probs=28.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           12 PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777788888888888888888888888888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=77.70  Aligned_cols=35  Identities=34%  Similarity=0.466  Sum_probs=28.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           12 PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777788888888888888888888888888776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.8e-10  Score=77.51  Aligned_cols=35  Identities=29%  Similarity=0.490  Sum_probs=25.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           12 LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.5e-10  Score=76.95  Aligned_cols=35  Identities=37%  Similarity=0.496  Sum_probs=27.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.9e-10  Score=77.39  Aligned_cols=35  Identities=29%  Similarity=0.458  Sum_probs=26.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           12 PHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=77.91  Aligned_cols=35  Identities=40%  Similarity=0.637  Sum_probs=27.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|+|++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           12 PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777778777888888887776

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=77.62  Aligned_cols=35  Identities=34%  Similarity=0.474  Sum_probs=28.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           12 PYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            77788888888888888888888888888888776

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.9e-10  Score=75.88  Aligned_cols=43  Identities=19%  Similarity=0.260  Sum_probs=38.7

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5888899999999999999999999999999999999999884

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=77.71  Aligned_cols=35  Identities=40%  Similarity=0.498  Sum_probs=27.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           12 PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.9e-10  Score=77.39  Aligned_cols=44  Identities=23%  Similarity=0.403  Sum_probs=39.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999999999999999863

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.96  E-value=2.8e-10  Score=77.46  Aligned_cols=35  Identities=37%  Similarity=0.587  Sum_probs=27.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           12 RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777777777777778777888888888776

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.5e-10  Score=76.19  Aligned_cols=43  Identities=23%  Similarity=0.242  Sum_probs=38.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5888899999999999999999999999999999999999884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=77.64  Aligned_cols=35  Identities=37%  Similarity=0.557  Sum_probs=28.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           12 PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            67788888888888888888888888888888776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=77.82  Aligned_cols=35  Identities=37%  Similarity=0.639  Sum_probs=28.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|+|++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788888888888888888888888888888776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.9e-10  Score=76.55  Aligned_cols=35  Identities=31%  Similarity=0.396  Sum_probs=28.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||.|.+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888888888888888888888888888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.9e-10  Score=77.41  Aligned_cols=35  Identities=37%  Similarity=0.577  Sum_probs=28.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           12 PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            77888888888888888888888888888888877

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.4e-10  Score=76.21  Aligned_cols=43  Identities=26%  Similarity=0.296  Sum_probs=38.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5888899999999999999999999999999999999999884

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.6e-10  Score=77.66  Aligned_cols=35  Identities=34%  Similarity=0.525  Sum_probs=26.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.+...|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=77.49  Aligned_cols=44  Identities=25%  Similarity=0.499  Sum_probs=39.0

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58888889999999999999999999999999999999998864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=77.61  Aligned_cols=35  Identities=37%  Similarity=0.559  Sum_probs=25.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.7e-10  Score=77.56  Aligned_cols=35  Identities=37%  Similarity=0.543  Sum_probs=27.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           12 PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=77.70  Aligned_cols=35  Identities=37%  Similarity=0.598  Sum_probs=27.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           12 PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.95  E-value=2.7e-10  Score=77.55  Aligned_cols=40  Identities=25%  Similarity=0.384  Sum_probs=38.6

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      +.+++||.|++||+.|.+.+.|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6788999999999999999999999999999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=76.77  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=39.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5888999999999999999999999999999999999999986

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.7e-10  Score=76.90  Aligned_cols=35  Identities=31%  Similarity=0.484  Sum_probs=27.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           12 PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.4e-10  Score=77.05  Aligned_cols=35  Identities=40%  Similarity=0.618  Sum_probs=25.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           12 PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=77.64  Aligned_cols=35  Identities=31%  Similarity=0.397  Sum_probs=27.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|+|++||.|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           12 PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777778877776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=77.63  Aligned_cols=35  Identities=40%  Similarity=0.589  Sum_probs=27.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           12 PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777788788888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.7e-10  Score=76.87  Aligned_cols=35  Identities=34%  Similarity=0.430  Sum_probs=26.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           12 PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=76.76  Aligned_cols=35  Identities=37%  Similarity=0.509  Sum_probs=29.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78888888888888888888888888888888877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.7e-10  Score=77.55  Aligned_cols=35  Identities=34%  Similarity=0.513  Sum_probs=25.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           12 PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.8e-10  Score=77.53  Aligned_cols=35  Identities=40%  Similarity=0.551  Sum_probs=27.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           12 PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777888888888888888888888888776

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=77.92  Aligned_cols=40  Identities=20%  Similarity=0.356  Sum_probs=38.6

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      +.+++||.|.+|++.|.+.+.|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6788999999999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.3e-10  Score=77.15  Aligned_cols=35  Identities=37%  Similarity=0.575  Sum_probs=27.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|++|++.|.+...|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           12 PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777877776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=76.87  Aligned_cols=35  Identities=37%  Similarity=0.564  Sum_probs=26.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.....|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           12 PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=5.1e-10  Score=76.92  Aligned_cols=43  Identities=30%  Similarity=0.572  Sum_probs=34.4

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccccc
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKK  545 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~  545 (712)
                      .|.++++|.|++|++.|.....|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4566778888888888888888888888888888888888875

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.4e-10  Score=76.01  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=38.1

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788888889999999999999999999999999999999886

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3e-10  Score=77.37  Aligned_cols=35  Identities=40%  Similarity=0.566  Sum_probs=25.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           12 PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.2e-10  Score=77.21  Aligned_cols=35  Identities=40%  Similarity=0.556  Sum_probs=26.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|+|++|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           12 SHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777776

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.5e-10  Score=75.58  Aligned_cols=43  Identities=19%  Similarity=0.272  Sum_probs=37.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      +|+++|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5788888888999999999999999999999999888888874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.9e-10  Score=76.27  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=39.4

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999999999999999863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=6.2e-10  Score=74.00  Aligned_cols=41  Identities=27%  Similarity=0.471  Sum_probs=36.4

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      |+++|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            77888888999999999999999999999999999988887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=77.22  Aligned_cols=40  Identities=20%  Similarity=0.401  Sum_probs=38.5

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      +.+++||.|++||+.|.+.+.|..|+++|.++++|.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            6778999999999999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.93  E-value=4.1e-10  Score=76.68  Aligned_cols=35  Identities=34%  Similarity=0.598  Sum_probs=26.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           12 PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777777777777777777766

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.1e-10  Score=76.17  Aligned_cols=44  Identities=25%  Similarity=0.320  Sum_probs=38.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCC-CCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHST-ARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478888888999999999999999999999999998 88998864

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=76.97  Aligned_cols=35  Identities=34%  Similarity=0.521  Sum_probs=28.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           12 PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            77888888888888888888888888888888877

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=77.23  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=39.0

Q ss_pred             hhccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        668 YMALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       668 ~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      .+.+++||.|++|++.|.+.+.|..|+++|.+++||.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            36788999999999999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.6e-10  Score=76.94  Aligned_cols=35  Identities=31%  Similarity=0.426  Sum_probs=28.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            77888888888888888888888888888888876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=5.3e-10  Score=75.64  Aligned_cols=43  Identities=23%  Similarity=0.326  Sum_probs=36.6

Q ss_pred             ccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccc
Q psy16830        502 LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCK  544 (712)
Q Consensus       502 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~  544 (712)
                      ..|.++++|.|++|++.|.....|..|+++|++++||.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3577888888888888888888888888888888888888885

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=76.97  Aligned_cols=43  Identities=23%  Similarity=0.478  Sum_probs=35.1

Q ss_pred             cccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        501 KLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       501 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667788888888888888888888888888888888888776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.8e-10  Score=75.52  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=37.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778888888999999999999999999999999999998886

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.5e-10  Score=76.45  Aligned_cols=35  Identities=29%  Similarity=0.400  Sum_probs=27.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777777777777778777877788887776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.92  E-value=7.7e-10  Score=83.84  Aligned_cols=55  Identities=31%  Similarity=0.724  Sum_probs=31.5

Q ss_pred             cCCCccccCC--CCcccCChHHHhhhhhhcCCCCcccCcc--cccccCChhhHHhhhhh
Q psy16830        505 FDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTARPFSCPV--CKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       505 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~--C~~~f~~~~~l~~H~~~  559 (712)
                      ...++|.|.+  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3445555655  6666666666666666666666666643  65555555555555543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=76.80  Aligned_cols=35  Identities=34%  Similarity=0.507  Sum_probs=27.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|++|++.|.+...|..|+++|++++||+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           12 PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            67777777777777777778777888888887776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4e-10  Score=76.69  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=37.6

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=4.2e-10  Score=79.61  Aligned_cols=51  Identities=20%  Similarity=0.256  Sum_probs=39.7

Q ss_pred             CcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCCCCC
Q psy16830        578 PKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLKTQ  629 (712)
Q Consensus       578 ~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  629 (712)
                      ++.|.....|..|+++|++++||.|.+|++.|...+.|..|+++ |.+++++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL-RHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH-HTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH-hccCCCC
Confidence            35677777888888888888888888888888888888888776 7666553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=3e-10  Score=80.36  Aligned_cols=52  Identities=19%  Similarity=0.216  Sum_probs=43.7

Q ss_pred             hhhhcchhhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCccc
Q psy16830        488 DQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFS  539 (712)
Q Consensus       488 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~  539 (712)
                      ++.|.....|..|+++|.++++|.|++||+.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567777888888888888888888888888888888888888888888873

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.1e-10  Score=76.16  Aligned_cols=35  Identities=40%  Similarity=0.571  Sum_probs=25.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           12 PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67777777777777777777777777777777664

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=7.8e-10  Score=73.54  Aligned_cols=41  Identities=24%  Similarity=0.291  Sum_probs=37.2

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67888899999999999999999999999999999999887

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.9e-10  Score=74.13  Aligned_cols=41  Identities=27%  Similarity=0.498  Sum_probs=36.3

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            77888888899999999999999999999999988888887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.6e-10  Score=75.73  Aligned_cols=35  Identities=34%  Similarity=0.420  Sum_probs=24.8

Q ss_pred             CcccCcCCcccCCchhHHhHHh-hhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQF-VHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~-~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|++ +|++++||+|.+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           12 PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            6667777777777777777777 7777777777666

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1e-09  Score=73.78  Aligned_cols=43  Identities=26%  Similarity=0.284  Sum_probs=37.5

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3778888889999999999999999999999999999998884

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=74.74  Aligned_cols=43  Identities=30%  Similarity=0.479  Sum_probs=37.8

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788888889999999999999999999999999999998873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.6e-10  Score=76.38  Aligned_cols=43  Identities=21%  Similarity=0.349  Sum_probs=37.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCc
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCP  541 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~  541 (712)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788888888888888888888888888888888888888885

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.8e-10  Score=74.93  Aligned_cols=35  Identities=34%  Similarity=0.468  Sum_probs=28.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMC  605 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C  605 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           12 PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888888888888888888888888888765

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.87  E-value=1.7e-10  Score=84.22  Aligned_cols=44  Identities=27%  Similarity=0.493  Sum_probs=26.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRS  617 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~  617 (712)
                      ||.|++||+.|.....|.   ++|+|++||.|.+|++.|....++..
T Consensus        14 ~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A           14 SFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             EEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             CccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            555555666655555554   55666666666666666666555443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=72.87  Aligned_cols=42  Identities=26%  Similarity=0.320  Sum_probs=38.2

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            588899999999999999999999999999999999999887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2e-09  Score=73.97  Aligned_cols=44  Identities=25%  Similarity=0.318  Sum_probs=39.1

Q ss_pred             ccccccCCCccccC--CCCcccCChHHHhhhhhhcCCCCcccCccc
Q psy16830        500 HKLLHFDKDYFSCN--YCGKTFLHKYKLRRHIVIHSTARPFSCPVC  543 (712)
Q Consensus       500 H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C  543 (712)
                      |.++|.++++|.|.  .|++.|.....|..|+++|++++||.|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788889999998  899999999999999999999999999887

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.7e-09  Score=73.03  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=37.8

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +.++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4667888999999999999999999999999999999999863

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2e-09  Score=73.17  Aligned_cols=43  Identities=23%  Similarity=0.361  Sum_probs=36.7

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4567888888999999999999999999999999999988863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=72.63  Aligned_cols=39  Identities=26%  Similarity=0.406  Sum_probs=37.0

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      +.+++||.|..|++.|...+.|..|+++|++++||.|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            677899999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.2e-09  Score=72.99  Aligned_cols=34  Identities=41%  Similarity=0.641  Sum_probs=23.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           12 PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6667777777777777777777777777777653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.81  E-value=2.8e-09  Score=71.14  Aligned_cols=41  Identities=20%  Similarity=0.262  Sum_probs=35.3

Q ss_pred             ccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcc
Q psy16830        502 LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPV  542 (712)
Q Consensus       502 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~  542 (712)
                      +.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46778888999999999999999999999999999988864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.5e-09  Score=72.69  Aligned_cols=34  Identities=35%  Similarity=0.549  Sum_probs=24.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A           12 PYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677777777777777777777777777777753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.1e-09  Score=73.03  Aligned_cols=34  Identities=38%  Similarity=0.572  Sum_probs=23.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|+|++|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           12 PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6667777777777777777777777777777653

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.81  E-value=1.8e-09  Score=73.34  Aligned_cols=34  Identities=32%  Similarity=0.605  Sum_probs=24.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           12 PFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6777777777777777777777777777777753

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.2e-09  Score=72.97  Aligned_cols=39  Identities=26%  Similarity=0.385  Sum_probs=37.1

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      +.+++||.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            678899999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.5e-09  Score=72.62  Aligned_cols=33  Identities=39%  Similarity=0.611  Sum_probs=23.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           12 PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            666777777777777777777777777777765

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=72.80  Aligned_cols=34  Identities=35%  Similarity=0.484  Sum_probs=24.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A           12 PFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6777777777777777777777777777777753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=72.86  Aligned_cols=34  Identities=38%  Similarity=0.591  Sum_probs=23.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            6667777777777777777777777777777653

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=73.05  Aligned_cols=34  Identities=41%  Similarity=0.672  Sum_probs=25.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           12 PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6777777777777777777777777777777754

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.3e-09  Score=72.79  Aligned_cols=39  Identities=18%  Similarity=0.295  Sum_probs=37.0

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      +.+++||.|++|++.|.+.+.|..|+++|++++||.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            677899999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=72.53  Aligned_cols=34  Identities=41%  Similarity=0.681  Sum_probs=24.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           12 CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6777777777777777777777777777777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=72.99  Aligned_cols=34  Identities=38%  Similarity=0.574  Sum_probs=24.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           12 PYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            6777777777777777777777777777777753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.4e-09  Score=72.74  Aligned_cols=34  Identities=35%  Similarity=0.494  Sum_probs=24.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           12 PYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6777777777777777777777777777777753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=72.95  Aligned_cols=33  Identities=42%  Similarity=0.613  Sum_probs=23.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A           12 HYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777777777777777777777777777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.79  E-value=2.6e-09  Score=70.89  Aligned_cols=33  Identities=36%  Similarity=0.569  Sum_probs=23.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.+...|..|+++|+|++||.|+
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A           10 PYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            666777777777777777777777777777663

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.3e-09  Score=72.82  Aligned_cols=34  Identities=38%  Similarity=0.621  Sum_probs=26.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           12 PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6777777777777777777777777777777764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.8e-09  Score=72.43  Aligned_cols=33  Identities=39%  Similarity=0.604  Sum_probs=23.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           12 HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            677777777777777777777777777777775

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=72.64  Aligned_cols=34  Identities=32%  Similarity=0.555  Sum_probs=23.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           12 PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5666666666666667777777777777776653

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.9e-09  Score=72.35  Aligned_cols=33  Identities=42%  Similarity=0.697  Sum_probs=23.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A           12 PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777777777777777777777777777765

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=72.89  Aligned_cols=39  Identities=26%  Similarity=0.379  Sum_probs=37.0

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      +.+++||+|++|++.|.....|..|+++|.++++|.|++
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=72.74  Aligned_cols=34  Identities=38%  Similarity=0.535  Sum_probs=23.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           12 PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6666677777777777777777777777776653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.3e-09  Score=72.05  Aligned_cols=34  Identities=35%  Similarity=0.641  Sum_probs=23.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           12 PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             ccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6666666777777777777777777777776653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.9e-09  Score=69.13  Aligned_cols=39  Identities=31%  Similarity=0.445  Sum_probs=34.1

Q ss_pred             ccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        502 LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       502 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      ++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467888899999999999999999999999999988887

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.7e-09  Score=72.46  Aligned_cols=33  Identities=39%  Similarity=0.675  Sum_probs=23.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           12 PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            666777777777777777777777777777765

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4e-09  Score=69.99  Aligned_cols=32  Identities=28%  Similarity=0.479  Sum_probs=22.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A           10 PYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            66666666666666777777777777777666

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2e-09  Score=71.00  Aligned_cols=37  Identities=22%  Similarity=0.372  Sum_probs=35.5

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSC  705 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  705 (712)
                      +.+++||.|++||+.|...+.|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            6778999999999999999999999999999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.6e-09  Score=71.09  Aligned_cols=33  Identities=33%  Similarity=0.450  Sum_probs=22.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           12 PYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566666666666666666666666666666663

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4e-09  Score=71.59  Aligned_cols=33  Identities=36%  Similarity=0.749  Sum_probs=23.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A           12 PYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667777777777777777777777777777764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.2e-09  Score=70.48  Aligned_cols=32  Identities=41%  Similarity=0.645  Sum_probs=18.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|++|++.|.....|..|+++|++++||.|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           11 PYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55555555555555555556556666666555

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.1e-09  Score=72.17  Aligned_cols=33  Identities=33%  Similarity=0.554  Sum_probs=23.9

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677777777777777777777777777777775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.9e-09  Score=70.84  Aligned_cols=38  Identities=26%  Similarity=0.377  Sum_probs=36.2

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCN  706 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  706 (712)
                      +.+++||.|++||+.|...+.|..|+++|++++||+|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            67789999999999999999999999999999999995

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=71.56  Aligned_cols=33  Identities=33%  Similarity=0.561  Sum_probs=21.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|++|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           12 PYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566666666666666666666666666666663

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.6e-09  Score=71.83  Aligned_cols=33  Identities=27%  Similarity=0.478  Sum_probs=24.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           12 PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            677777777777777777777777777777775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.8e-09  Score=71.75  Aligned_cols=33  Identities=45%  Similarity=0.625  Sum_probs=24.6

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           12 PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            677777777777777777777777777777775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.6e-09  Score=70.96  Aligned_cols=37  Identities=32%  Similarity=0.566  Sum_probs=35.6

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSC  705 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  705 (712)
                      +.+++||.|++||++|.+.+.|..|+++|.+++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            6778999999999999999999999999999999998

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.8e-09  Score=70.95  Aligned_cols=33  Identities=36%  Similarity=0.563  Sum_probs=21.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|+|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           12 PYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566666666666666666666666666666663

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.5e-09  Score=72.72  Aligned_cols=40  Identities=25%  Similarity=0.309  Sum_probs=38.3

Q ss_pred             hccCCCccCC--hhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        669 MALNKPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       669 ~~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      +.+++||.|.  .|++.|...+.|..|+++|.+++||+|.+|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6778999998  899999999999999999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4e-09  Score=70.84  Aligned_cols=33  Identities=27%  Similarity=0.469  Sum_probs=21.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           12 RYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566666666666666666666666666666663

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.7e-09  Score=70.47  Aligned_cols=32  Identities=28%  Similarity=0.503  Sum_probs=20.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           12 PFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            56666666666666666666666666666665

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.9e-09  Score=69.55  Aligned_cols=32  Identities=31%  Similarity=0.622  Sum_probs=20.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|+|.+|++.|.....|..|+++|++++||+|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56666666666666666666666666666655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.2e-09  Score=70.64  Aligned_cols=33  Identities=39%  Similarity=0.727  Sum_probs=23.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A           12 PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667777777777777777777777777777765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5e-09  Score=71.13  Aligned_cols=33  Identities=30%  Similarity=0.577  Sum_probs=22.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcC-CCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTG-QKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~-~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++ ++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           12 CFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56666666666666777777777776 6777665

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2.1e-09  Score=81.52  Aligned_cols=62  Identities=21%  Similarity=0.250  Sum_probs=42.1

Q ss_pred             hhHhhccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        495 ILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       495 ~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ..|..|++.|.+.+++.|++|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            34666777777777777777777773 66777776 667777777777776655 4666666665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.9e-09  Score=71.17  Aligned_cols=33  Identities=39%  Similarity=0.702  Sum_probs=23.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|++|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           12 PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777777777777777777777777777765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.70  E-value=6e-09  Score=69.12  Aligned_cols=32  Identities=31%  Similarity=0.455  Sum_probs=22.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|.+|++.|.+...|..|+++|++++||+|
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           11 PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            66677777777777777777777777777766

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.3e-09  Score=70.98  Aligned_cols=33  Identities=18%  Similarity=0.342  Sum_probs=22.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCT  603 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~  603 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           12 PFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566666666666666666666666666666664

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=1e-08  Score=73.05  Aligned_cols=43  Identities=16%  Similarity=0.150  Sum_probs=38.0

Q ss_pred             ccchhccCCCccCCh--hhhhhhChHHHHhHH-hhhcCCCcccccc
Q psy16830        665 SKEYMALNKPFKCDD--CDQRFLTKILLNKHK-LLHFDKDYFSCNY  707 (712)
Q Consensus       665 ~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~~  707 (712)
                      ......++|||+|..  ||++|...+.|.+|+ ++|++++||-|..
T Consensus        18 ~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           18 FPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            344578999999975  999999999999998 6899999999975

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.9e-09  Score=69.95  Aligned_cols=32  Identities=41%  Similarity=0.598  Sum_probs=22.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           12 SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            56666666666666677777777777777666

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=4.5e-09  Score=79.65  Aligned_cols=65  Identities=20%  Similarity=0.414  Sum_probs=45.6

Q ss_pred             hHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        552 DVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       552 ~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      .|..|++. |.++     ++|.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++ |++.
T Consensus         4 ~L~~H~~~-~c~~-----r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~-c~~~   68 (75)
T 2d9k_A            4 GSSGHEET-ECPL-----RLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV-CGRE   68 (75)
T ss_dssp             CCSCCCCC-CCCC-----CCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH-BTTB
T ss_pred             HHHhhCcc-cCCC-----cccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH-ccCC
Confidence            45555544 3433     3677777777774 77888887 788888888888888776 4888888766 6554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.8e-09  Score=69.33  Aligned_cols=32  Identities=31%  Similarity=0.549  Sum_probs=18.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +|.|.+|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           12 PYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            55555555555555555555555555555544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=8.2e-09  Score=67.13  Aligned_cols=37  Identities=16%  Similarity=0.204  Sum_probs=34.6

Q ss_pred             ccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccc
Q psy16830        670 ALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCN  706 (712)
Q Consensus       670 ~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  706 (712)
                      .+++||.|++||+.|...+.|..|+++|.+++||.+.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            4678999999999999999999999999999999874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.55  E-value=3.9e-08  Score=61.00  Aligned_cols=33  Identities=24%  Similarity=0.389  Sum_probs=29.0

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLC  602 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C  602 (712)
                      +||.|.+|++.|.....|..|+++|+|++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            378999999999999999999999999998853

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.55  E-value=2.4e-08  Score=61.97  Aligned_cols=33  Identities=30%  Similarity=0.407  Sum_probs=30.9

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCCcccc
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSC  705 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  705 (712)
                      +||.|++||+.|...+.|..|+++|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.54  E-value=2.6e-08  Score=63.77  Aligned_cols=35  Identities=29%  Similarity=0.304  Sum_probs=28.5

Q ss_pred             HHhhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       590 H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      |+++|++++||+|++|++.|.+...|.+|+++ |.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hcc
Confidence            67788888888888888888888888888776 544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=9.9e-09  Score=80.29  Aligned_cols=56  Identities=13%  Similarity=0.280  Sum_probs=41.5

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      |.++|.++++|.|++|++.|.....|..|+++|++++||.|..|.    ....|..|.+.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~   71 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKY   71 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcc
Confidence            345677888888888888888888888888888888888876544    45556666665

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.52  E-value=5.3e-08  Score=63.18  Aligned_cols=37  Identities=19%  Similarity=0.476  Sum_probs=31.0

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhhhcCCCCcccC
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSC  540 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C  540 (712)
                      |.++++|.|++||+.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4577888999999999999999999989988888865

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.2e-07  Score=67.53  Aligned_cols=32  Identities=31%  Similarity=0.464  Sum_probs=15.6

Q ss_pred             CcccCc--CCcccCCchhHHhHH-hhhcCCCcccC
Q psy16830        571 SYKCSL--CPKAFTYLGALEDHQ-FVHTGQKTHLC  602 (712)
Q Consensus       571 ~~~C~~--C~~~f~~~~~L~~H~-~~H~~~k~~~C  602 (712)
                      ||+|.+  |+++|...+.|..|+ ++|++++||.|
T Consensus        27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            455533  555555555555554 34555555444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=1e-07  Score=60.90  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=23.0

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcCC
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHST  534 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  534 (712)
                      |+++|.+++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55666666666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=7e-08  Score=61.72  Aligned_cols=36  Identities=19%  Similarity=0.329  Sum_probs=27.7

Q ss_pred             ccccCCCccccCCCCcccCChHHHhhhhhhcCCCCc
Q psy16830        502 LLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP  537 (712)
Q Consensus       502 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p  537 (712)
                      ++|.++++|.|++|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467777788888888888888888888888877664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.7e-08  Score=62.21  Aligned_cols=33  Identities=27%  Similarity=0.322  Sum_probs=30.0

Q ss_pred             hccCCCccCCh--hhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDD--CDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||+|++  |+++|.+.+.|.+|+++|++++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56789999987  9999999999999999999863

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.4e-08  Score=62.68  Aligned_cols=34  Identities=24%  Similarity=0.409  Sum_probs=20.2

Q ss_pred             hhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        592 FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       592 ~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      ++|++++||.|.+|++.|.....|..|+++ |+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCC
Confidence            345666666666666666666666666555 4443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.44  E-value=5.9e-08  Score=61.18  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=31.3

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDY  702 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  702 (712)
                      +.+++||.|.+||+.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999999998875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=1.2e-08  Score=79.92  Aligned_cols=50  Identities=20%  Similarity=0.297  Sum_probs=30.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      +|.|.+|++.|.....|..|+++|++++||+|..|.    ....|..|.+. |.+
T Consensus        25 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~-~~~   74 (88)
T 1x6f_A           25 TYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKY-ADG   74 (88)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCC-CCC
T ss_pred             CCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcc-ccc
Confidence            666666666666666666666666666667665443    44555555544 443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.42  E-value=6.8e-08  Score=60.86  Aligned_cols=34  Identities=29%  Similarity=0.403  Sum_probs=31.4

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDY  702 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  702 (712)
                      +.+++||.|.+||+.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4678999999999999999999999999998875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.42  E-value=2.2e-08  Score=61.68  Aligned_cols=31  Identities=29%  Similarity=0.465  Sum_probs=29.7

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCCcc
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYF  703 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  703 (712)
                      +||.|++||++|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.39  E-value=1.9e-07  Score=58.73  Aligned_cols=34  Identities=26%  Similarity=0.415  Sum_probs=26.4

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhhhcCCCCc
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP  537 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p  537 (712)
                      |.++++|.|++|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677788888888888888888888888877664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.38  E-value=2.2e-07  Score=58.46  Aligned_cols=34  Identities=26%  Similarity=0.472  Sum_probs=26.0

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhhhcCCCCc
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTARP  537 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p  537 (712)
                      |.++++|.|++|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677778888888888888888888877777654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.8e-07  Score=59.44  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=16.8

Q ss_pred             hcCCCcccCCC--CccccCCchhhhhHHhhhccC
Q psy16830        594 HTGQKTHLCTM--CPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       594 H~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      ++|++||+|++  |+++|.+++.|.+|+++ |++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCC
Confidence            44555555554  55555555555555554 443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.2e-07  Score=60.66  Aligned_cols=33  Identities=24%  Similarity=0.339  Sum_probs=26.8

Q ss_pred             hhhcCCCcccCCCCccccCCchhhhhH-HhhhccC
Q psy16830        592 FVHTGQKTHLCTMCPASYATIGGLRSH-IKIVHHG  625 (712)
Q Consensus       592 ~~H~~~k~~~C~~C~~~f~~~~~L~~H-~~~~H~~  625 (712)
                      ++|++++||+|.+|++.|..++.|..| +++ |.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK-HSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH-TCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH-ccC
Confidence            568888888998899999888888888 554 654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=1.3e-07  Score=60.82  Aligned_cols=35  Identities=37%  Similarity=0.525  Sum_probs=32.1

Q ss_pred             ccCCCccCC--hhhhhhhChHHHHhHHhhhcCCCccc
Q psy16830        670 ALNKPFKCD--DCDQRFLTKILLNKHKLLHFDKDYFS  704 (712)
Q Consensus       670 ~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~  704 (712)
                      .+++||.|.  .||++|...+.|..|+++|+++++|.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            467999999  59999999999999999999999873

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.33  E-value=1.1e-07  Score=59.45  Aligned_cols=33  Identities=21%  Similarity=0.430  Sum_probs=29.6

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCccccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYC  708 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  708 (712)
                      ..+++||+|+.||++|...+.|.+|+       ||+|...
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            46789999999999999999999999       8888753

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.32  E-value=5.4e-08  Score=59.87  Aligned_cols=31  Identities=26%  Similarity=0.373  Sum_probs=25.2

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcc
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTH  600 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  600 (712)
                      +||+|.+|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3688888888888888888888888888876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.1e-07  Score=59.02  Aligned_cols=33  Identities=30%  Similarity=0.430  Sum_probs=30.5

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||.|.+|++.|...+.|..|+++|.+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            567899999999999999999999999999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=1.8e-07  Score=59.37  Aligned_cols=33  Identities=24%  Similarity=0.462  Sum_probs=30.3

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||.|.+|++.|...+.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            567899999999999999999999999998864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3e-07  Score=58.22  Aligned_cols=33  Identities=36%  Similarity=0.566  Sum_probs=30.4

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||.|++|++.|...+.|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            567899999999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.3e-07  Score=58.82  Aligned_cols=33  Identities=30%  Similarity=0.415  Sum_probs=30.4

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||+|.+|++.|...+.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            567899999999999999999999999998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=3.2e-07  Score=58.09  Aligned_cols=33  Identities=27%  Similarity=0.469  Sum_probs=30.2

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||.|++|++.|...+.|..|+++|.+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            456799999999999999999999999999864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=3.6e-07  Score=58.27  Aligned_cols=32  Identities=22%  Similarity=0.445  Sum_probs=20.9

Q ss_pred             hhcCCCcccCCCCccccCCc-hhhhhHHhhhccC
Q psy16830        593 VHTGQKTHLCTMCPASYATI-GGLRSHIKIVHHG  625 (712)
Q Consensus       593 ~H~~~k~~~C~~C~~~f~~~-~~L~~H~~~~H~~  625 (712)
                      +|++++||.|.+|++.|... +.|.+|+++ |.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA-HEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH-HHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh-cCC
Confidence            46666667777777777766 667777655 443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.6e-07  Score=56.31  Aligned_cols=33  Identities=18%  Similarity=0.502  Sum_probs=24.6

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      .|.++++|.|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            456677777777777777777777777777665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.22  E-value=4.2e-07  Score=61.91  Aligned_cols=35  Identities=23%  Similarity=0.357  Sum_probs=28.5

Q ss_pred             hhcCCCcccCCCCccccCCchhhhhHHhhhccCCC
Q psy16830        593 VHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGLK  627 (712)
Q Consensus       593 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  627 (712)
                      +|+|++||.|.+|++.|.+...|..|++..|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            58899999999999999999999999984487754

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=6.4e-07  Score=57.50  Aligned_cols=35  Identities=29%  Similarity=0.461  Sum_probs=28.6

Q ss_pred             ccCCCccccC--CCCcccCChHHHhhhhhhcCCCCcc
Q psy16830        504 HFDKDYFSCN--YCGKTFLHKYKLRRHIVIHSTARPF  538 (712)
Q Consensus       504 h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~  538 (712)
                      |.++++|.|+  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4577888888  4888888888888888888888876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=3.7e-07  Score=61.90  Aligned_cols=40  Identities=25%  Similarity=0.313  Sum_probs=30.1

Q ss_pred             hHHhHHhhhcCCCcccCC--CCccccCCchhhhhHHhhhccCC
Q psy16830        586 ALEDHQFVHTGQKTHLCT--MCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       586 ~L~~H~~~H~~~k~~~C~--~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      .+..|+..|++++||.|.  .|++.|...+.|.+|+++ |.++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~-H~~e   46 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHH-ccCC
Confidence            445566678888888885  688888888888888876 6553

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=9.2e-07  Score=55.92  Aligned_cols=33  Identities=27%  Similarity=0.379  Sum_probs=24.3

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            466677777777777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=7.2e-07  Score=56.84  Aligned_cols=34  Identities=26%  Similarity=0.385  Sum_probs=22.9

Q ss_pred             ccccCCCccccCCCCcccCChHHHhhh-hhhcCCC
Q psy16830        502 LLHFDKDYFSCNYCGKTFLHKYKLRRH-IVIHSTA  535 (712)
Q Consensus       502 ~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~  535 (712)
                      ++|.+++||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            456666777777777777777777777 6666553

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=9.4e-07  Score=55.85  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=24.7

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      +|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            466777777777777777777777777777765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=5.5e-07  Score=54.15  Aligned_cols=30  Identities=27%  Similarity=0.488  Sum_probs=27.7

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      ++||.|..||+.|...+.|..|+++|.+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.16  E-value=7.5e-07  Score=53.03  Aligned_cols=29  Identities=24%  Similarity=0.568  Sum_probs=26.9

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|++||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=7.1e-07  Score=56.87  Aligned_cols=33  Identities=27%  Similarity=0.495  Sum_probs=21.7

Q ss_pred             cccCCCccccCCCCcccCCh-HHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHK-YKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~-~~L~~H~~~H~~~  535 (712)
                      +|.++++|.|++|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45566666666666666666 6666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.15  E-value=5.2e-07  Score=53.79  Aligned_cols=29  Identities=38%  Similarity=0.698  Sum_probs=27.0

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|+.||+.|...+.|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.14  E-value=5.7e-07  Score=57.32  Aligned_cols=33  Identities=18%  Similarity=0.241  Sum_probs=29.9

Q ss_pred             hccCCCccCCh--hhhhhhChHHHHhHHhhhcCCC
Q psy16830        669 MALNKPFKCDD--CDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       669 ~~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +.+++||.|.+  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56789999995  9999999999999999999864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.14  E-value=9e-07  Score=55.25  Aligned_cols=25  Identities=28%  Similarity=0.502  Sum_probs=16.3

Q ss_pred             cCCCccccCCCCcccCChHHHhhhh
Q psy16830        505 FDKDYFSCNYCGKTFLHKYKLRRHI  529 (712)
Q Consensus       505 ~~~~~~~C~~C~k~f~~~~~L~~H~  529 (712)
                      .+++||.|+.||++|.+.++|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.4e-06  Score=54.97  Aligned_cols=33  Identities=27%  Similarity=0.518  Sum_probs=22.9

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            355666777777777777777777777777665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3e-07  Score=54.88  Aligned_cols=29  Identities=28%  Similarity=0.437  Sum_probs=26.8

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|.+||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=7.3e-07  Score=53.07  Aligned_cols=29  Identities=31%  Similarity=0.667  Sum_probs=27.0

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|.+||+.|.+.+.|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=3.6e-07  Score=55.01  Aligned_cols=30  Identities=27%  Similarity=0.588  Sum_probs=27.4

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      ++||.|..||+.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            378999999999999999999999998763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.10  E-value=1.1e-06  Score=53.81  Aligned_cols=30  Identities=37%  Similarity=0.802  Sum_probs=27.7

Q ss_pred             CCCccCC--hhhhhhhChHHHHhHHhhhcCCC
Q psy16830        672 NKPFKCD--DCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       672 ~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      ++||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=1.7e-06  Score=62.71  Aligned_cols=40  Identities=18%  Similarity=0.272  Sum_probs=33.9

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCCCcccccccc
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCG  709 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  709 (712)
                      +.+++||+|.+|++.|...+.|..|+++|+++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            456899999999999999999999999999864 4555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.10  E-value=1e-06  Score=52.85  Aligned_cols=30  Identities=23%  Similarity=0.416  Sum_probs=27.6

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCCc
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKDY  702 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  702 (712)
                      +||.|.+||+.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.7e-06  Score=54.59  Aligned_cols=33  Identities=33%  Similarity=0.670  Sum_probs=24.2

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            355667777777777777777777777777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.09  E-value=1.5e-06  Score=51.65  Aligned_cols=27  Identities=30%  Similarity=0.655  Sum_probs=18.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      ||.|+.|++.|.....|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666777776666677776666665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=7.6e-07  Score=52.03  Aligned_cols=27  Identities=37%  Similarity=0.512  Sum_probs=25.2

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      ++||.|+.||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999984

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=5.9e-07  Score=52.53  Aligned_cols=27  Identities=19%  Similarity=0.362  Sum_probs=25.1

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      ++||+|+.||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999984

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=9.5e-07  Score=52.54  Aligned_cols=29  Identities=31%  Similarity=0.558  Sum_probs=27.0

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|..||+.|...+.|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=7.6e-07  Score=52.54  Aligned_cols=28  Identities=29%  Similarity=0.648  Sum_probs=26.0

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      ++||.|+.||+.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.08  E-value=2.1e-06  Score=50.99  Aligned_cols=27  Identities=33%  Similarity=0.667  Sum_probs=19.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            567777777777777777777777665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.07  E-value=1.2e-06  Score=53.18  Aligned_cols=29  Identities=34%  Similarity=0.691  Sum_probs=26.9

Q ss_pred             CCccCC--hhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCD--DCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      +||.|+  .||++|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.04  E-value=2.8e-06  Score=50.90  Aligned_cols=28  Identities=18%  Similarity=0.382  Sum_probs=19.3

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      +|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5667777777777777777777776654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=2.6e-06  Score=50.53  Aligned_cols=28  Identities=32%  Similarity=0.637  Sum_probs=19.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      ||.|+.|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            5777777777777777777777776653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=1.1e-06  Score=59.50  Aligned_cols=38  Identities=29%  Similarity=0.524  Sum_probs=26.1

Q ss_pred             hhccccccCCCccccC--CCCcccCChHHHhhhhhhcCCC
Q psy16830        498 NKHKLLHFDKDYFSCN--YCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       498 ~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      ..|...|.+++||.|+  .|++.|...+.|..|+++|+++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3444557777777774  5777777777777777777665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=2e-06  Score=51.12  Aligned_cols=28  Identities=43%  Similarity=0.774  Sum_probs=20.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      +|.|.+|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5777777777777777777777777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.02  E-value=2.4e-06  Score=58.09  Aligned_cols=33  Identities=21%  Similarity=0.476  Sum_probs=20.5

Q ss_pred             ccCCCccccCCCCcccCChHHHhhhhh-hcCCCC
Q psy16830        504 HFDKDYFSCNYCGKTFLHKYKLRRHIV-IHSTAR  536 (712)
Q Consensus       504 h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~  536 (712)
                      |+++++|.|.+|++.|.....|..|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            556666666666666666666666666 666543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.02  E-value=1.4e-06  Score=50.74  Aligned_cols=27  Identities=30%  Similarity=0.744  Sum_probs=24.2

Q ss_pred             CccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        674 PFKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      ||.|.+||+.|...+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=3.2e-06  Score=51.17  Aligned_cols=28  Identities=39%  Similarity=0.774  Sum_probs=20.0

Q ss_pred             CcccC--cCCcccCCchhHHhHHhhhcCCC
Q psy16830        571 SYKCS--LCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       571 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      ||.|+  .|++.|...+.|..|+++|+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            57776  67777777777777777777653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.4e-07  Score=52.86  Aligned_cols=27  Identities=41%  Similarity=0.690  Sum_probs=18.0

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=8.9e-07  Score=51.16  Aligned_cols=26  Identities=35%  Similarity=0.733  Sum_probs=24.3

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      +||.|+.||++|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999984

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=3e-06  Score=50.75  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=17.5

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      +|.|..|++.|.....|..|+++|+|+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.97  E-value=3.3e-06  Score=53.64  Aligned_cols=32  Identities=28%  Similarity=0.492  Sum_probs=23.4

Q ss_pred             ccCCCccccCC--CCcccCChHHHhhhhhhcCCC
Q psy16830        504 HFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       504 h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      |.++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777774  777777777777777777665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.94  E-value=2.5e-06  Score=51.15  Aligned_cols=29  Identities=28%  Similarity=0.587  Sum_probs=26.5

Q ss_pred             CCccCChhhhhhhChHHHHhH-HhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKH-KLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H-~~~H~~~~  701 (712)
                      +||.|..||+.|.+.+.|..| +++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            579999999999999999999 79998864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.93  E-value=4.5e-06  Score=48.53  Aligned_cols=25  Identities=48%  Similarity=0.879  Sum_probs=15.4

Q ss_pred             cccCcCCcccCCchhHHhHHhhhcC
Q psy16830        572 YKCSLCPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~~H~~  596 (712)
                      |+|.+|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.93  E-value=6.5e-06  Score=50.18  Aligned_cols=28  Identities=32%  Similarity=0.553  Sum_probs=18.8

Q ss_pred             CCcccC--cCCcccCCchhHHhHHhhhcCC
Q psy16830        570 KSYKCS--LCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       570 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            356676  6777777777777777766665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=6.3e-06  Score=49.30  Aligned_cols=27  Identities=44%  Similarity=0.849  Sum_probs=15.4

Q ss_pred             CcccCcCCcccCCchhHHhH-HhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDH-QFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H-~~~H~~~  597 (712)
                      ||.|..|++.|.+...|..| +++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 4555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.9e-06  Score=51.71  Aligned_cols=27  Identities=41%  Similarity=0.817  Sum_probs=17.2

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            566666666666666666666666654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.84  E-value=8.6e-06  Score=47.77  Aligned_cols=26  Identities=35%  Similarity=0.752  Sum_probs=17.9

Q ss_pred             CccccCCCCcccCChHHHhhhhhhcC
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIHS  533 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H~  533 (712)
                      ++|.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46667777777777777777776665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.83  E-value=7.2e-06  Score=47.68  Aligned_cols=25  Identities=16%  Similarity=0.339  Sum_probs=16.9

Q ss_pred             CccccCCCCcccCChHHHhhhhhhc
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIH  532 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H  532 (712)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4666777777777777777776665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.82  E-value=9.3e-06  Score=47.16  Aligned_cols=25  Identities=24%  Similarity=0.501  Sum_probs=17.0

Q ss_pred             CccccCCCCcccCChHHHhhhhhhc
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIH  532 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H  532 (712)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4666777777777777777776665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.92  E-value=4.2e-06  Score=48.18  Aligned_cols=24  Identities=33%  Similarity=0.598  Sum_probs=11.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVH  594 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H  594 (712)
                      ||.|..||+.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444444

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.69  E-value=3.2e-05  Score=55.97  Aligned_cols=39  Identities=18%  Similarity=0.248  Sum_probs=28.2

Q ss_pred             CCCCCccCccChhccCCHHHHHHhHhhcCCCCCcCcchh
Q psy16830         93 ALNKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCG  131 (712)
Q Consensus        93 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~  131 (712)
                      ..++||+|.+|++.|.....|..|+++|+.....+.+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            446788888888888888888888888776555555443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.65  E-value=1e-05  Score=47.84  Aligned_cols=27  Identities=30%  Similarity=0.663  Sum_probs=25.1

Q ss_pred             CCccCC--hhhhhhhChHHHHhHHhhhcC
Q psy16830        673 KPFKCD--DCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       673 k~~~C~--~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      +||.|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999974

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.52  E-value=3.3e-05  Score=45.52  Aligned_cols=25  Identities=32%  Similarity=0.648  Sum_probs=15.7

Q ss_pred             CcccC--cCCcccCCchhHHhHHhhhc
Q psy16830        571 SYKCS--LCPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       571 ~~~C~--~C~~~f~~~~~L~~H~~~H~  595 (712)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.50  E-value=9.8e-05  Score=53.16  Aligned_cols=52  Identities=27%  Similarity=0.444  Sum_probs=41.4

Q ss_pred             cccCc--CCcccCCchhHHhHH-hhhcCCC------cccCC--CCccccCCchhhhhHHhhhc
Q psy16830        572 YKCSL--CPKAFTYLGALEDHQ-FVHTGQK------THLCT--MCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       572 ~~C~~--C~~~f~~~~~L~~H~-~~H~~~k------~~~C~--~C~~~f~~~~~L~~H~~~~H  623 (712)
                      |.|..  |++.|.+...|..|+ ..|.|.+      +|.|.  -|++.+.....|.+|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            34544  888888888888887 4787765      78996  79998888889999988765

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.00049  Score=49.44  Aligned_cols=47  Identities=28%  Similarity=0.472  Sum_probs=31.3

Q ss_pred             cccccCChHHHHHHH-HHhcCCC------CcCCc--cccccCCChhHHHHHHHHhc
Q psy16830        192 CPKAFTHLAALEDHQ-YVHTGQK------SHMCN--LCSARFTCKGALLGHIKVLH  238 (712)
Q Consensus       192 C~k~f~~~~~L~~H~-~~H~~~~------~~~C~--~C~~~f~~~~~L~~H~~~~h  238 (712)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            667777777777776 3565544      57775  57777777777777776644

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.26  E-value=0.0023  Score=56.98  Aligned_cols=76  Identities=16%  Similarity=0.265  Sum_probs=39.2

Q ss_pred             cCccccCChhHHHHHHHhcCCCCCccCCcccccccChHHHHHHHHHhcCCCCCCceecCCChhhccChHHHHHHHhhhcC
Q psy16830        324 SCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSLCPRVFTHLAALEDHQFVHTG  403 (712)
Q Consensus       324 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  403 (712)
                      .|+..+. ...|..|.. .-.-++..|+.|+..+ .+..|..|+...-..+   ...|+.|+..+. ...|..|..++.|
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r---~~~C~~C~~~~~-~~~l~~H~~~~~~  161 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRR---QVSCDNCAASMA-FEDKEIHDQNCPL  161 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTC---EEECTTTCCEEE-GGGHHHHHTTCCC
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCC---CeECCCCCCccC-HHHHHhHHHhCcC
Confidence            4554433 344555653 2233455666666655 3455666665444333   456666666554 3456666666666


Q ss_pred             CCc
Q psy16830        404 QKT  406 (712)
Q Consensus       404 ~~~  406 (712)
                      ..+
T Consensus       162 ~~~  164 (170)
T 3hcs_A          162 ALE  164 (170)
T ss_dssp             ---
T ss_pred             hhh
Confidence            544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.85  E-value=0.0057  Score=50.94  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=53.3

Q ss_pred             CCcccCcccccccCChhhHHhhhhh-cccCccccccCCcccCcC------CcccCCchhHHhHHhhhcCCCcccCCCCcc
Q psy16830        535 ARPFSCPVCKKQFKRKQDVAGHDRV-VHQGKKLIVYKSYKCSLC------PKAFTYLGALEDHQFVHTGQKTHLCTMCPA  607 (712)
Q Consensus       535 ~~p~~C~~C~~~f~~~~~l~~H~~~-~h~~~~~~~~~~~~C~~C------~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~  607 (712)
                      .+++.|.+|...|.+...+..|... .|...-    +.|.+..+      ++.|...    .+...+.+.+.|.|.+|+.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~  101 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKV----RRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNM  101 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHH----HHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHH----HHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCC
Confidence            3678999999999999999999831 132210    12222110      2222221    1334567788899999999


Q ss_pred             ccCCchhhhhHHhh
Q psy16830        608 SYATIGGLRSHIKI  621 (712)
Q Consensus       608 ~f~~~~~L~~H~~~  621 (712)
                      .|.+...|..|+.-
T Consensus       102 ~f~s~~~~~~H~~g  115 (127)
T 1zu1_A          102 TFSSPVVAESHYIG  115 (127)
T ss_dssp             ECSSHHHHHHHHTS
T ss_pred             EeCCHHHHHHHHCC
Confidence            99999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.78  E-value=0.0019  Score=52.54  Aligned_cols=34  Identities=18%  Similarity=0.342  Sum_probs=29.1

Q ss_pred             HHhhhcCCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       590 H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      +...|+|++||.|..|++.|.+.+.|..|+++.-
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            4457899999999999999999999999987644

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.47  E-value=0.0025  Score=51.73  Aligned_cols=31  Identities=16%  Similarity=0.252  Sum_probs=27.8

Q ss_pred             chhccCCCccCChhhhhhhChHHHHhHHhhh
Q psy16830        667 EYMALNKPFKCDDCDQRFLTKILLNKHKLLH  697 (712)
Q Consensus       667 ~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H  697 (712)
                      ..++|++||.|..|++.|.+.+.|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3478899999999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.43  E-value=0.014  Score=48.57  Aligned_cols=77  Identities=17%  Similarity=0.306  Sum_probs=47.1

Q ss_pred             CCccccccccccCChhhhhccccc-cccCcccccccceecCCc------ccccCChHHHHHHHHHhcCCCCcCCcccccc
Q psy16830        151 KPFSCPICKKQFKRKHEVSKHDRI-VHQGKKYNVYKSYKCSLC------PKAFTHLAALEDHQYVHTGQKSHMCNLCSAR  223 (712)
Q Consensus       151 ~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~~~~~~~~~~C~~C------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  223 (712)
                      +++.|.+|+..|.+...+..|..- .|....    +.|.+..+      ++.+....    +...+.+...|.|.+|+..
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~  102 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKV----RRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMT  102 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHH----HHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEE
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHH----HHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCE
Confidence            678888888888888888888731 132110    11222100      11221110    1123455678999999999


Q ss_pred             CCChhHHHHHHH
Q psy16830        224 FTCKGALLGHIK  235 (712)
Q Consensus       224 f~~~~~L~~H~~  235 (712)
                      |.+...|..|+.
T Consensus       103 f~s~~~~~~H~~  114 (127)
T 1zu1_A          103 FSSPVVAESHYI  114 (127)
T ss_dssp             CSSHHHHHHHHT
T ss_pred             eCCHHHHHHHHC
Confidence            999999999975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.92  E-value=0.036  Score=49.14  Aligned_cols=79  Identities=18%  Similarity=0.336  Sum_probs=48.8

Q ss_pred             cccCc--ccccccCChhhHHhhhhhcccCccccccCCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchh
Q psy16830        537 PFSCP--VCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGG  614 (712)
Q Consensus       537 p~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~  614 (712)
                      ...|+  -|+..+. ...|..|....-       ..+..|+.|+..+ ....|..|+...-+.++-.|+.|+..+. ..+
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~~C~-------~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~  151 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQAHCE-------FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FED  151 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHTTCT-------TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGG
T ss_pred             ccCCCCCCCCceec-HhHHHHHHhcCC-------ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHH
Confidence            44553  4655443 455666654311       1256788887777 5667778877667777777888877664 467


Q ss_pred             hhhHHhhhccCC
Q psy16830        615 LRSHIKIVHHGL  626 (712)
Q Consensus       615 L~~H~~~~H~~~  626 (712)
                      |..|..+ ++|.
T Consensus       152 l~~H~~~-~~~~  162 (170)
T 3hcs_A          152 KEIHDQN-CPLA  162 (170)
T ss_dssp             HHHHHTT-CCC-
T ss_pred             HHhHHHh-CcCh
Confidence            7777655 5554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.60  E-value=0.033  Score=35.56  Aligned_cols=23  Identities=26%  Similarity=0.632  Sum_probs=14.3

Q ss_pred             CcccCCCCccccCCchhhhhHHh
Q psy16830        598 KTHLCTMCPASYATIGGLRSHIK  620 (712)
Q Consensus       598 k~~~C~~C~~~f~~~~~L~~H~~  620 (712)
                      -+|.|+.|+..|+....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34566666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.67  E-value=0.12  Score=33.04  Aligned_cols=23  Identities=22%  Similarity=0.313  Sum_probs=17.1

Q ss_pred             CCccCccChhccCCHHHHHHhHh
Q psy16830         96 KPFKCDDCDQCFLTKILLNKHKL  118 (712)
Q Consensus        96 ~~~~C~~C~~~f~~~~~l~~H~~  118 (712)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45777777777777777777776

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.02  E-value=0.092  Score=31.43  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=19.3

Q ss_pred             cccCCCCccccCCchhhhhHHhhhccC
Q psy16830        599 THLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            367777777777777777777776643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.98  E-value=0.38  Score=28.77  Aligned_cols=28  Identities=25%  Similarity=0.376  Sum_probs=24.1

Q ss_pred             CccCCcchhhccCHHHHHHHHHhhccCC
Q psy16830        290 PFKCDDCFQCFLSKILLNQHKKQMHFNK  317 (712)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (712)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            5889999999999999999998877643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.76  E-value=0.25  Score=35.92  Aligned_cols=48  Identities=25%  Similarity=0.560  Sum_probs=26.1

Q ss_pred             CcCcchhHhhcCHHHHHHHHhhcCCCCCccccccccccCChhhhhccccc
Q psy16830        125 LTCNLCGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRI  174 (712)
Q Consensus       125 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  174 (712)
                      |.|..||.++.. ..|..|...-.+...|.|-.|++.|.. ..+..|..-
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsC   58 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKC   58 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCC
T ss_pred             EEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeee
Confidence            445555544432 345566555444445667777777763 456666543

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.43  E-value=0.68  Score=34.19  Aligned_cols=49  Identities=20%  Similarity=0.486  Sum_probs=22.7

Q ss_pred             CCcccc-CCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhh
Q psy16830        507 KDYFSC-NYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHD  557 (712)
Q Consensus       507 ~~~~~C-~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~  557 (712)
                      -.+..| ..|+..+. +..|..|+...-..++..|..|+..|. ..+|..|.
T Consensus        14 ~~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           14 FNVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             CSCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             CcccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            344455 35555543 344555554333444455555555443 23344443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=80.26  E-value=1.4  Score=26.43  Aligned_cols=25  Identities=24%  Similarity=0.268  Sum_probs=20.1

Q ss_pred             CCCccCccChhccCCHHHHHHhHhh
Q psy16830         95 NKPFKCDDCDQCFLTKILLNKHKLL  119 (712)
Q Consensus        95 ~~~~~C~~C~~~f~~~~~l~~H~~~  119 (712)
                      ...+.|..|+.+|.+...+..|++.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3467888899899888888888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	712
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	8e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.004
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 480 KPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIH 532
           K + C  C + F  K   ++H  +H     + C  CGK F  K+ L  H+ IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 3e-04
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 320 FTCNSCGLIFSEKKYLRNHMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           + C  CG  F+ K     HM  H   +P+ C +CGK+FK ++ ++ H ++H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 4e-04
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQKSHMCNLCSARFTCKGALLGHIKV 236
           K Y C  C K+FTH +  + H  +H G + + C +C  +F  K  L+GH+K+
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 8e-04
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 96  KPFKCDDCDQCFLTKILLNKH-KLLHTEGHLTCNLCGQTFRQKFRLLNHMISH 147
           K + C  C + F  K   ++H  +        C +CG+ F+ K  L+ HM  H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 130 CGQTFRQKFRLLNHMISHSTEKPFSCPICKKQFKRKHEVSKHDRI 174
           CG++F  K +   HM  H   +P+ C +C K+FK KH +  H +I
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 7/60 (11%)

Query: 150 EKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSLCPKAFTHLAALEDHQYVH 209
           +K + C  C K F  K +  +H  +          + Y C +C K F     L  H  +H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLG------LRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 20/45 (44%), Positives = 29/45 (64%)

Query: 515 CGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV 559
           CGK+F HK +  RH+ +H   RP+ C VC K+FK K  + GH ++
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 289 KPFKCDDCFQCFLSKILLNQHKKQMHFNKGGFTCNSCGLIFSEKKYLRNHMISH 342
           K + C  C + F  K   ++H   MH     + C  CG  F  K +L  HM  H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 148 STEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKYNVYKSYKCSL 191
           S  KP+ C  C K F R   ++ H + VH  +     + +KC +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE-----RPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 183 VYKSYKCSLCPKAFTHLAALEDH-QYVHTGQKSHMCNL 219
           V K Y C  C K F+    L  H + VHT ++ H C +
Sbjct: 2   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 510 FSCNYCGKTFLHKYKLRRHI-VIHSTARPFSCPV 542
           + C  CGK F     L  HI  +H++ RP  C V
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 343 STQKPFSCSLCGKRFKRENGVINHQRLHQTKKVYKSYKCSL 383
           S  KP+ C  CGK F R + +  H +   T +  + +KC +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE--RPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 533 STARPFSCPVCKKQFKRKQDVAGHDRVVHQGKKLIVYKSYKCSL 576
           S  +P+ C  C K F R   + GH + VH  +     + +KC +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE-----RPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 568 VYKSYKCSLCPKAFTYLGALEDH-QFVHTGQKTHLC 602
           V K Y C  C K F+    L  H + VHT ++ H C
Sbjct: 2   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
           +S+ C +C +AF     L+ H   HT +K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           +S+ C +C +AF     L+ H   HT +K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 346 KPFSCSLCGKRFKRENGVINHQRLH 370
           + F C +C + F R+  +  H R H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLH 370
           HS +KP+ C  CGK F R + ++ HQR+H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTG 211
           K Y C  C KAF+  + L  HQ VHTG
Sbjct: 6   KPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.002
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTG 596
           K Y C  C KAF+    L  HQ VHTG
Sbjct: 6   KPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRI 174
           HS EKP+ C  C K F R   + +H R+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 8e-04
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 121 TEGHLTCNLCGQTFRQKFRLLNHMISHSTEKPFS 154
           T   + C +CG+ FR  + L  H +SHS EKP+S
Sbjct: 2   TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTG 211
           K ++C +C + F+    L  H   HTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTG 596
           K ++C +C + F+    L  H   HTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 345 QKPFSCSLCGKRFKRENGVINHQRLH 370
           QKPF C +C + F R + +  H R H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 185 KSYKCSLCPKAFTHLAALEDHQYVHTGQK 213
           K + C  CPK F     L  H   H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK 598
           K + C  CPK F     L  H   H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 338 HMISHSTQKPFSCSLCGKRFKRENGVINHQRLH 370
                  ++ + C  CGK F   + +  H+R H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 150 EKPFSCPICKKQFKRKHEVSKHDRIVHQG 178
           EKP+SCP+C  +FKRK  +S H R  H G
Sbjct: 1   EKPYSCPVCGLRFKRKDRMSYHVR-SHDG 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 186 SYKCS--LCPKAFTHLAALEDHQYVHTGQKSHMC 217
           S+ C    C K+F     L++H  +H+  + ++C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 510 FSCNY--CGKTFLHKYKLRRHIVIHSTARPFSC 540
           FSC    CGK+F  K  L+ H+ +HS  R + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.004
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 126 TCNLCGQTFRQKFRLLNHMISHSTEKPFSC 155
               CG++F  K  L  HM  HS  + + C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLHQTKK 374
           H+ +KP++CS C K F+++  +  H + +    
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVHQGKKY 181
           H+ EKP++C  C K F++K  +  H +  +    +
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPNF 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 147 HSTEKPFSCPICKKQFKRKHEVSKHDRIVH 176
           HS EKP+ C IC  +F +   +  H    H
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.004
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 342 HSTQKPFSCSLCGKRFKRENGVINHQRLH 370
            S ++PF C +C   F  +     H ++H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	712
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.14
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.11
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.1
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.1
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.09
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.0
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.98
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.96
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.96
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.91
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.89
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.88
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.84
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.8
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.73
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.71
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.68
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.65
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.44
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.19
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.96
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.93
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.88
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.7
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.7
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.59
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.58
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.51
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.28
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.28
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.24
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.01
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.95
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.82
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.77
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.71
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.7
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.64
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.54
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.52
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.28
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.05
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.7
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.6
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.56
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.49
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.05
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.98
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.93
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.69
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.69
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.65
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.39
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.64
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.49
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.97
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.62
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.47
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.42
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.25
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.13
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.98
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.69
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.69
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.99
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.53
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.29
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.67
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.21
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.85
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	85.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.34
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.33
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.26
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.2
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	83.42
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.29
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.95

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.8e-16  Score=106.52  Aligned_cols=51  Identities=31%  Similarity=0.578  Sum_probs=48.8

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCCcccCCCCccccCCchhhhhHHhh
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      |||+|. ||++|.....|..|+++|+|++||.|.+||++|.+.+.|..|+++
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            689995 999999999999999999999999999999999999999999976

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5e-15  Score=101.76  Aligned_cols=52  Identities=40%  Similarity=0.939  Sum_probs=37.3

Q ss_pred             CCccccCCCCcccCChHHHhhhhhhcCCCCcccCcccccccCChhhHHhhhhh
Q psy16830        507 KDYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKKQFKRKQDVAGHDRV  559 (712)
Q Consensus       507 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~~f~~~~~l~~H~~~  559 (712)
                      ++||.|+ ||++|....+|..|+++|++++||.|++|+++|...+.|..|+++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            4667774 777777777777777777777777777777777777777777665

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=5.9e-13  Score=81.97  Aligned_cols=36  Identities=28%  Similarity=0.566  Sum_probs=34.0

Q ss_pred             CCCccCChhhhhhhChHHHHhHHh-hhcCCCcccccc
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKL-LHFDKDYFSCNY  707 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~  707 (712)
                      +|||+|.+||++|...+.|++||+ +|+|++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            699999999999999999999986 799999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=79.93  Aligned_cols=36  Identities=36%  Similarity=0.665  Sum_probs=32.4

Q ss_pred             cCCcccCcCCcccCCchhHHhHHh-hhcCCCcccCCC
Q psy16830        569 YKSYKCSLCPKAFTYLGALEDHQF-VHTGQKTHLCTM  604 (712)
Q Consensus       569 ~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~k~~~C~~  604 (712)
                      .+||+|.+||++|...+.|.+|++ +|+|+|||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            479999999999999999999986 799999999975

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=4.5e-12  Score=78.42  Aligned_cols=37  Identities=19%  Similarity=0.434  Sum_probs=29.8

Q ss_pred             hHHhhhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        589 DHQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       589 ~H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +|+++|++++||+|++||++|...++|.+|+++ |+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CCCC
Confidence            477888888888888888888888888888776 7664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.9e-11  Score=75.55  Aligned_cols=37  Identities=24%  Similarity=0.588  Sum_probs=29.3

Q ss_pred             hccccccCCCccccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        499 KHKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       499 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      +|+++|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5777888888888888888888888888888888775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.2e-11  Score=75.02  Aligned_cols=34  Identities=29%  Similarity=0.572  Sum_probs=31.1

Q ss_pred             hhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        592 FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       592 ~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      |+|+|||||+|++|+++|+++++|++|++.+|.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5799999999999999999999999999887754

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.5e-11  Score=72.32  Aligned_cols=33  Identities=27%  Similarity=0.580  Sum_probs=24.7

Q ss_pred             hhcCCCcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        593 VHTGQKTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       593 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +|+|+|||+|.+||++|.++++|..|+++ |+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~-HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc-cCCC
Confidence            47777777777777777777777777766 6653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.1e-11  Score=72.99  Aligned_cols=32  Identities=25%  Similarity=0.586  Sum_probs=30.8

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      |+++|||+|.+||++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            78999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=1.5e-11  Score=75.39  Aligned_cols=34  Identities=29%  Similarity=0.356  Sum_probs=30.7

Q ss_pred             HHhhhcCCCcccCCCCccccCCchhhhhHHhhhcc
Q psy16830        590 HQFVHTGQKTHLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       590 H~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      |.|+|+|||||+|.+|+++|.++++|.+|+++ |.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~-H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhc-Cc
Confidence            67899999999999999999999999999877 63

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.4e-11  Score=73.86  Aligned_cols=33  Identities=30%  Similarity=0.487  Sum_probs=29.3

Q ss_pred             hhhcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        592 FVHTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       592 ~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      |+|+|++||+|.+|+++|.+++.|..|+++ |++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~-H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHH-TTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcc-cCC
Confidence            589999999999999999999999999988 544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.02  E-value=3.7e-11  Score=68.55  Aligned_cols=29  Identities=24%  Similarity=0.568  Sum_probs=27.9

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      |||+|++||++|...+.|.+||++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6.2e-11  Score=67.41  Aligned_cols=29  Identities=38%  Similarity=0.708  Sum_probs=27.8

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      |||.|++||++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=3.8e-11  Score=67.46  Aligned_cols=28  Identities=32%  Similarity=0.545  Sum_probs=26.9

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      ||||+|++||++|..++.|.+||++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.98  E-value=1e-10  Score=66.72  Aligned_cols=29  Identities=34%  Similarity=0.689  Sum_probs=23.4

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      +||+|++|+++|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            47888888888888888888888888875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=7.1e-11  Score=70.50  Aligned_cols=32  Identities=31%  Similarity=0.489  Sum_probs=30.1

Q ss_pred             hccCCCccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        669 MALNKPFKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       669 ~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      ++|+|||+|++|+++|.+.+.|.+||++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57899999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.1e-10  Score=69.62  Aligned_cols=31  Identities=23%  Similarity=0.696  Sum_probs=25.3

Q ss_pred             hcCCCcccCCCCccccCCchhhhhHHhhhccC
Q psy16830        594 HTGQKTHLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       594 H~~~k~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      |+|+|||+|.+|++.|+++++|++|+++ |++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCC
Confidence            6788888888888888888888888876 754

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.9e-10  Score=65.39  Aligned_cols=29  Identities=34%  Similarity=0.658  Sum_probs=23.4

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      |||.|++||++|...+.|..|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            47888888888888888888888888875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.2e-10  Score=69.06  Aligned_cols=33  Identities=24%  Similarity=0.731  Sum_probs=30.8

Q ss_pred             cccCc--CCcccCCchhHHhHHhhhcCCCcccCCC
Q psy16830        572 YKCSL--CPKAFTYLGALEDHQFVHTGQKTHLCTM  604 (712)
Q Consensus       572 ~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~~C~~  604 (712)
                      |.|++  |+++|.....|.+|+++|+|++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            77887  9999999999999999999999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=4.2e-10  Score=68.82  Aligned_cols=34  Identities=21%  Similarity=0.254  Sum_probs=19.8

Q ss_pred             ccccccCCCccccCCCCcccCChHHHhhhhhhcC
Q psy16830        500 HKLLHFDKDYFSCNYCGKTFLHKYKLRRHIVIHS  533 (712)
Q Consensus       500 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  533 (712)
                      |.++|++++||.|++|+++|...++|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4555555556666556666655555555555554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.7e-10  Score=69.49  Aligned_cols=33  Identities=33%  Similarity=0.734  Sum_probs=31.2

Q ss_pred             ccCCh--hhhhhhChHHHHhHHhhhcCCCcccccc
Q psy16830        675 FKCDD--CDQRFLTKILLNKHKLLHFDKDYFSCNY  707 (712)
Q Consensus       675 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~  707 (712)
                      |.|++  ||++|...+.|++||++|+|++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78987  9999999999999999999999999974

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.7e-10  Score=68.05  Aligned_cols=32  Identities=28%  Similarity=0.447  Sum_probs=18.2

Q ss_pred             cccCCCccccCCCCcccCChHHHhhhhhhcCC
Q psy16830        503 LHFDKDYFSCNYCGKTFLHKYKLRRHIVIHST  534 (712)
Q Consensus       503 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  534 (712)
                      +|++++||.|.+||++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.2e-10  Score=68.61  Aligned_cols=32  Identities=25%  Similarity=0.573  Sum_probs=17.1

Q ss_pred             hcCCCCcccCcccccccCChhhHHhhhhhccc
Q psy16830        531 IHSTARPFSCPVCKKQFKRKQDVAGHDRVVHQ  562 (712)
Q Consensus       531 ~H~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  562 (712)
                      +|+|++||.|++|++.|....+|..|++.+|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            45555555555555555555555555544443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=4.7e-10  Score=62.96  Aligned_cols=27  Identities=33%  Similarity=0.736  Sum_probs=17.2

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  596 (712)
                      |||+|++|+++|...+.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            466666666666666666666666654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=3.7e-10  Score=61.44  Aligned_cols=26  Identities=35%  Similarity=0.708  Sum_probs=25.0

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      |||+|+.||++|...+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=4.8e-10  Score=72.47  Aligned_cols=40  Identities=25%  Similarity=0.430  Sum_probs=27.6

Q ss_pred             hhHHhHHhhhcCCCcccCCC--CccccCCchhhhhHHhhhccCC
Q psy16830        585 GALEDHQFVHTGQKTHLCTM--CPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       585 ~~L~~H~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      ..|..|+. |+|++||+|.+  |+++|..++.|.+|+++ |+|+
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~-Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccc-ccCC
Confidence            34555653 77777777766  77777777777777766 7664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=8.2e-10  Score=71.36  Aligned_cols=41  Identities=32%  Similarity=0.595  Sum_probs=32.8

Q ss_pred             hhHhhccccccCCCccccCC--CCcccCChHHHhhhhhhcCCCC
Q psy16830        495 ILLNKHKLLHFDKDYFSCNY--CGKTFLHKYKLRRHIVIHSTAR  536 (712)
Q Consensus       495 ~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  536 (712)
                      ..|..|+. |.+++||.|.+  |++.|...++|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45666774 88888888877  8888888888888888888875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.5e-09  Score=61.93  Aligned_cols=28  Identities=29%  Similarity=0.453  Sum_probs=26.8

Q ss_pred             CCccCCh--hhhhhhChHHHHhHHhhhcCC
Q psy16830        673 KPFKCDD--CDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       673 k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      |||.|++  ||++|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.1e-09  Score=58.43  Aligned_cols=25  Identities=48%  Similarity=0.784  Sum_probs=15.8

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~  595 (712)
                      ||+|..||++|...+.|..|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            5666666666666666666666664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.5e-09  Score=62.20  Aligned_cols=28  Identities=36%  Similarity=0.713  Sum_probs=26.6

Q ss_pred             CCccCCh--hhhhhhChHHHHhHHhhhcCC
Q psy16830        673 KPFKCDD--CDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       673 k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      |||.|++  ||++|.+.+.|.+|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.6e-09  Score=59.90  Aligned_cols=28  Identities=39%  Similarity=0.767  Sum_probs=21.7

Q ss_pred             CCcccCc--CCcccCCchhHHhHHhhhcCC
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      +||+|++  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4777877  888888888888888888775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=3.4e-09  Score=61.25  Aligned_cols=29  Identities=34%  Similarity=0.691  Sum_probs=26.9

Q ss_pred             CCccCC--hhhhhhhChHHHHhHHhhhcCCC
Q psy16830        673 KPFKCD--DCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       673 k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      |||.|+  .||++|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=4.9e-09  Score=59.97  Aligned_cols=28  Identities=36%  Similarity=0.732  Sum_probs=20.8

Q ss_pred             CCcccCc--CCcccCCchhHHhHHhhhcCC
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      +||.|++  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3677766  777777777777777777775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8e-09  Score=59.67  Aligned_cols=29  Identities=38%  Similarity=0.778  Sum_probs=22.0

Q ss_pred             CCcccC--cCCcccCCchhHHhHHhhhcCCC
Q psy16830        570 KSYKCS--LCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       570 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      +||.|+  .|+++|...+.|..|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            367775  48888888888888888888775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=1.2e-08  Score=57.58  Aligned_cols=27  Identities=33%  Similarity=0.752  Sum_probs=25.6

Q ss_pred             CCccCCh--hhhhhhChHHHHhHHhhhcC
Q psy16830        673 KPFKCDD--CDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       673 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  699 (712)
                      |||+|++  ||++|.+.+.|.+|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.44  E-value=3.2e-08  Score=57.33  Aligned_cols=29  Identities=38%  Similarity=0.836  Sum_probs=27.0

Q ss_pred             CCCccCCh--hhhhhhChHHHHhHHhhhcCC
Q psy16830        672 NKPFKCDD--CDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       672 ~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      |+||.|++  ||++|...+.|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999998  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=4.3e-08  Score=55.26  Aligned_cols=27  Identities=33%  Similarity=0.797  Sum_probs=18.2

Q ss_pred             CCcccCc--CCcccCCchhHHhHHhhhcC
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~  596 (712)
                      +||+|++  |+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3666766  77777777777777777665

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=4.6e-08  Score=54.39  Aligned_cols=26  Identities=31%  Similarity=0.710  Sum_probs=24.6

Q ss_pred             CCccCCh--hhhhhhChHHHHhHHhhhc
Q psy16830        673 KPFKCDD--CDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       673 k~~~C~~--C~~~f~~~~~L~~H~~~H~  698 (712)
                      +||.|++  ||++|.+.+.|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999995

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.1e-07  Score=49.69  Aligned_cols=29  Identities=28%  Similarity=0.432  Sum_probs=27.3

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      ++||+|.+|.+...++++|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2e-07  Score=51.74  Aligned_cols=25  Identities=32%  Similarity=0.728  Sum_probs=14.4

Q ss_pred             CcccCc--CCcccCCchhHHhHHhhhc
Q psy16830        571 SYKCSL--CPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       571 ~~~C~~--C~~~f~~~~~L~~H~~~H~  595 (712)
                      ||.|++  ||++|...+.|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            555555  5555555555555555553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=5.1e-07  Score=52.17  Aligned_cols=25  Identities=36%  Similarity=0.607  Sum_probs=13.2

Q ss_pred             CcccCc--CCcccCCchhHHhHHhhhc
Q psy16830        571 SYKCSL--CPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       571 ~~~C~~--C~~~f~~~~~L~~H~~~H~  595 (712)
                      ||.|++  |+++|+..+.|.+|+++|+
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            455544  5555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=2.9e-07  Score=48.67  Aligned_cols=27  Identities=33%  Similarity=0.762  Sum_probs=25.8

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      +|||.|++||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999996

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7e-07  Score=45.40  Aligned_cols=25  Identities=40%  Similarity=0.727  Sum_probs=12.8

Q ss_pred             cccCcCCcccCCchhHHhHHhhhcC
Q psy16830        572 YKCSLCPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~~H~~  596 (712)
                      .+|.+|++.|+.+..|..||+.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            3455555555555555555555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.1e-06  Score=48.29  Aligned_cols=31  Identities=42%  Similarity=0.875  Sum_probs=25.4

Q ss_pred             ccccCCCCcccCChHHHhhhhhhcCCCCccc
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHIVIHSTARPFS  539 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~  539 (712)
                      ...|+.||+.|.....|.+|...|++++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4568888888888888888888888888873

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6.7e-07  Score=49.10  Aligned_cols=30  Identities=30%  Similarity=0.628  Sum_probs=27.7

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCCCcc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQKTH  600 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  600 (712)
                      ...|..||+.|.+...|.+|...|+||+||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            457999999999999999999999999998

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.5e-06  Score=44.14  Aligned_cols=25  Identities=40%  Similarity=0.793  Sum_probs=14.9

Q ss_pred             cccCCCCcccCChHHHhhhhhhcCC
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIVIHST  534 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~~H~~  534 (712)
                      .+|+.|++.|+.+..|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.4e-06  Score=45.54  Aligned_cols=27  Identities=37%  Similarity=0.683  Sum_probs=18.4

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  596 (712)
                      +||+|.+|...-.+.++|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            366677776666666677777776665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=9.9e-07  Score=45.67  Aligned_cols=27  Identities=44%  Similarity=0.754  Sum_probs=25.5

Q ss_pred             CCccCChhhhhhhChHHHHhHHhhhcC
Q psy16830        673 KPFKCDDCDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       673 k~~~C~~C~~~f~~~~~L~~H~~~H~~  699 (712)
                      |||+|..|.+.-.+.+.|+.|+|+|.+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            799999999999999999999999963

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=2.1e-06  Score=45.36  Aligned_cols=25  Identities=28%  Similarity=0.598  Sum_probs=21.0

Q ss_pred             CCcccCCCCccccCCchhhhhHHhh
Q psy16830        597 QKTHLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       597 ~k~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      |+||.|.+||+.|..+...++|.++
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh
Confidence            5788888888888888888888776

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.1e-06  Score=43.89  Aligned_cols=29  Identities=34%  Similarity=0.486  Sum_probs=25.0

Q ss_pred             CcccCCCCccccCCchhhhhHHhhhccCC
Q psy16830        598 KTHLCTMCPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       598 k~~~C~~C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      +||+|.+|.+.....++|+.|+++.|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            68999999999999999999999888643

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.1e-06  Score=45.90  Aligned_cols=29  Identities=31%  Similarity=0.515  Sum_probs=27.0

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      +|||.|++|+.+|..+..+.-|+|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=2.9e-06  Score=44.08  Aligned_cols=26  Identities=27%  Similarity=0.710  Sum_probs=24.3

Q ss_pred             ccCChhhhhhhChHHHHhHHhhhcCC
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLHFDK  700 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H~~~  700 (712)
                      ..|..||++|..++.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46999999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=1.1e-05  Score=41.11  Aligned_cols=26  Identities=38%  Similarity=0.572  Sum_probs=22.6

Q ss_pred             ccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        573 KCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       573 ~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      +|+.|.++|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58889999999999999999998875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=8.3e-06  Score=43.59  Aligned_cols=27  Identities=30%  Similarity=0.596  Sum_probs=15.4

Q ss_pred             CCcccCcCCcccCCchhHHhHHhhhcC
Q psy16830        570 KSYKCSLCPKAFTYLGALEDHQFVHTG  596 (712)
Q Consensus       570 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  596 (712)
                      +||.|++|+..|..+..+.-|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            355555555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.3e-05  Score=42.19  Aligned_cols=27  Identities=30%  Similarity=0.620  Sum_probs=23.2

Q ss_pred             cccCCCCcccCChHHHhhhhhhcCCCC
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIVIHSTAR  536 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~~H~~~~  536 (712)
                      |.|++||.....++-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778889888888888999999888864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=5e-06  Score=44.66  Aligned_cols=27  Identities=30%  Similarity=0.563  Sum_probs=24.3

Q ss_pred             CCccCCh--hhhhhhChHHHHhHHhhhcC
Q psy16830        673 KPFKCDD--CDQRFLTKILLNKHKLLHFD  699 (712)
Q Consensus       673 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  699 (712)
                      |||.|.+  |++++.+.++|+.||+.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999997654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.8e-05  Score=41.62  Aligned_cols=27  Identities=26%  Similarity=0.388  Sum_probs=23.0

Q ss_pred             cccCcCCcccCCchhHHhHHhhhcCCC
Q psy16830        572 YKCSLCPKAFTYLGALEDHQFVHTGQK  598 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~~H~~~k  598 (712)
                      |.|+.||.....++-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.6e-05  Score=41.12  Aligned_cols=24  Identities=33%  Similarity=0.603  Sum_probs=12.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhh
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVH  594 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H  594 (712)
                      ||+|..|..+....++|..|+|+|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            455555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.7e-05  Score=40.41  Aligned_cols=26  Identities=38%  Similarity=0.855  Sum_probs=20.2

Q ss_pred             cccCCCCcccCChHHHhhhhhhcCCC
Q psy16830        510 FSCNYCGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       510 ~~C~~C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      ..|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35788888888888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.6e-05  Score=42.66  Aligned_cols=26  Identities=38%  Similarity=0.830  Sum_probs=19.9

Q ss_pred             CcccCCC--CccccCCchhhhhHHhhhc
Q psy16830        598 KTHLCTM--CPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       598 k~~~C~~--C~~~f~~~~~L~~H~~~~H  623 (712)
                      |||.|.+  |+++++..++|+.|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5777876  8888888888888887755

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.51  E-value=1.6e-05  Score=39.87  Aligned_cols=24  Identities=33%  Similarity=0.801  Sum_probs=22.9

Q ss_pred             ccCChhhhhhhChHHHHhHHhhhc
Q psy16830        675 FKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       675 ~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      |+|..|..+|..+++|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999995

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.3e-05  Score=41.17  Aligned_cols=23  Identities=39%  Similarity=0.670  Sum_probs=19.5

Q ss_pred             cccCCCCccccCCchhhhhHHhh
Q psy16830        599 THLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      ||.|..|+.+|.++++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888888888888888888875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=1.3e-05  Score=42.17  Aligned_cols=24  Identities=38%  Similarity=0.621  Sum_probs=22.4

Q ss_pred             CccCChhhhhhhChHHHHhHHhhh
Q psy16830        674 PFKCDDCDQRFLTKILLNKHKLLH  697 (712)
Q Consensus       674 ~~~C~~C~~~f~~~~~L~~H~~~H  697 (712)
                      ||.|..|+++|.++.+|..||..-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=4.7e-05  Score=38.82  Aligned_cols=26  Identities=38%  Similarity=0.704  Sum_probs=19.7

Q ss_pred             ccCCCCcccCChHHHhhhhhhcCCCC
Q psy16830        511 SCNYCGKTFLHKYKLRRHIVIHSTAR  536 (712)
Q Consensus       511 ~C~~C~k~f~~~~~L~~H~~~H~~~~  536 (712)
                      +|+.|.++|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777877777777777777764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=5.4e-05  Score=39.91  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=24.2

Q ss_pred             CcccCCCCccccCCchhhhhHHhhhcc
Q psy16830        598 KTHLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       598 k~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      +||+|.+|.....+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999999999999999999998773

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.28  E-value=4.3e-05  Score=44.64  Aligned_cols=30  Identities=20%  Similarity=0.456  Sum_probs=27.1

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCCC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDKD  701 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  701 (712)
                      .+.|+|.+|++.|.+.-+|--||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999997654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00015  Score=38.22  Aligned_cols=28  Identities=32%  Similarity=0.472  Sum_probs=21.2

Q ss_pred             CCcCCccccccCCChhHHHHHHHHhccC
Q psy16830        213 KSHMCNLCSARFTCKGALLGHIKVLHEG  240 (712)
Q Consensus       213 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~  240 (712)
                      +||.|..|.+.....++|+.|+++.|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5777888888888888888888776653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.24  E-value=9.8e-05  Score=36.96  Aligned_cols=23  Identities=52%  Similarity=0.949  Sum_probs=13.3

Q ss_pred             cccCcCCcccCCchhHHhHHhhh
Q psy16830        572 YKCSLCPKAFTYLGALEDHQFVH  594 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~~~H  594 (712)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555555

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.20  E-value=6.8e-05  Score=40.56  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=24.8

Q ss_pred             cccCCCCccccCCchhhhhHHhhhccC
Q psy16830        599 THLCTMCPASYATIGGLRSHIKIVHHG  625 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  625 (712)
                      ||.|.+|++.|..+..|.+|.+..|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999999998876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00015  Score=42.26  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=23.5

Q ss_pred             cCCCcccCCCCccccCCchhhhhHHh
Q psy16830        595 TGQKTHLCTMCPASYATIGGLRSHIK  620 (712)
Q Consensus       595 ~~~k~~~C~~C~~~f~~~~~L~~H~~  620 (712)
                      +|-|||.|.+|++.|-.+.++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999964

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00017  Score=38.97  Aligned_cols=21  Identities=14%  Similarity=0.496  Sum_probs=9.4

Q ss_pred             cccCCC--CccccCCchhhhhHH
Q psy16830        599 THLCTM--CPASYATIGGLRSHI  619 (712)
Q Consensus       599 ~~~C~~--C~~~f~~~~~L~~H~  619 (712)
                      ||.|.+  |.++|.+.++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444443  444444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=0.0003  Score=36.80  Aligned_cols=27  Identities=33%  Similarity=0.659  Sum_probs=20.4

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      .|.|.+|...|...-.|+.||..|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            467777777777777777777777764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00015  Score=42.28  Aligned_cols=26  Identities=27%  Similarity=0.604  Sum_probs=23.4

Q ss_pred             cCCCccCChhhhhhhChHHHHhHHhh
Q psy16830        671 LNKPFKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       671 ~~k~~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                      |-|||.|.+||+.|..+..+.+|.-.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56899999999999999999999753

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00055  Score=35.76  Aligned_cols=28  Identities=32%  Similarity=0.701  Sum_probs=24.3

Q ss_pred             cceecCCcccccCChHHHHHHHHHhcCC
Q psy16830        185 KSYKCSLCPKAFTHLAALEDHQYVHTGQ  212 (712)
Q Consensus       185 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  212 (712)
                      ..|.|..|...|.....|+.||-.|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3688999999999999999999999874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.77  E-value=0.00036  Score=36.61  Aligned_cols=27  Identities=41%  Similarity=0.819  Sum_probs=20.6

Q ss_pred             CcccCc--CCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSL--CPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      ||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            666754  888888888888888888775

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00043  Score=36.18  Aligned_cols=25  Identities=32%  Similarity=0.620  Sum_probs=16.2

Q ss_pred             CccccCC--CCcccCChHHHhhhhhhc
Q psy16830        508 DYFSCNY--CGKTFLHKYKLRRHIVIH  532 (712)
Q Consensus       508 ~~~~C~~--C~k~f~~~~~L~~H~~~H  532 (712)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566654  667777777777766655

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.71  E-value=0.0006  Score=35.62  Aligned_cols=24  Identities=38%  Similarity=0.798  Sum_probs=20.3

Q ss_pred             ceecCC--cccccCChHHHHHHHHHh
Q psy16830        186 SYKCSL--CPKAFTHLAALEDHQYVH  209 (712)
Q Consensus       186 ~~~C~~--C~k~f~~~~~L~~H~~~H  209 (712)
                      ||+|+.  |++.|+.++.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            788865  889999999999988877

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.70  E-value=0.00033  Score=37.88  Aligned_cols=27  Identities=30%  Similarity=0.893  Sum_probs=16.4

Q ss_pred             cccCcccccccCChhhHHhhhhhcccC
Q psy16830        537 PFSCPVCKKQFKRKQDVAGHDRVVHQG  563 (712)
Q Consensus       537 p~~C~~C~~~f~~~~~l~~H~~~~h~~  563 (712)
                      ||.|.+|++.|.++.-|.+|....|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            556666666666666666666555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00035  Score=36.80  Aligned_cols=24  Identities=25%  Similarity=0.606  Sum_probs=10.6

Q ss_pred             cccCcccccccCChhhHHhhhhhc
Q psy16830        537 PFSCPVCKKQFKRKQDVAGHDRVV  560 (712)
Q Consensus       537 p~~C~~C~~~f~~~~~l~~H~~~~  560 (712)
                      ||+|..|..-..+.++|..|++..
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHH
Confidence            444444444444444444444433

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.54  E-value=0.001  Score=38.77  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=13.3

Q ss_pred             CcccCcCccccCChhHHHHHHHhcCC
Q psy16830        319 GFTCNSCGLIFSEKKYLRNHMISHST  344 (712)
Q Consensus       319 ~~~C~~C~~~f~~~~~l~~H~~~h~~  344 (712)
                      .|.|.+|++.|.+-..|--||+.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            35555555555555555555555543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.00059  Score=34.10  Aligned_cols=22  Identities=23%  Similarity=0.526  Sum_probs=11.2

Q ss_pred             cccCCCCccccCCchhhhhHHh
Q psy16830        599 THLCTMCPASYATIGGLRSHIK  620 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~  620 (712)
                      ||+|.-|...|-++.+|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4555555555555555555543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00069  Score=36.60  Aligned_cols=28  Identities=36%  Similarity=0.675  Sum_probs=25.0

Q ss_pred             CCcccCc--CCcccCCchhHHhHH-hhhcCC
Q psy16830        570 KSYKCSL--CPKAFTYLGALEDHQ-FVHTGQ  597 (712)
Q Consensus       570 ~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~  597 (712)
                      +||.|.+  |.++|++.+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            4899998  999999999999997 898754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.28  E-value=0.00094  Score=33.51  Aligned_cols=24  Identities=25%  Similarity=0.683  Sum_probs=21.6

Q ss_pred             ccCCCCccccCCchhhhhHHhhhc
Q psy16830        600 HLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       600 ~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      |.|++|-+.|+.+.++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999998877

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.05  E-value=0.0012  Score=34.64  Aligned_cols=28  Identities=32%  Similarity=0.587  Sum_probs=18.6

Q ss_pred             CccccCC--CCcccCChHHHhhhhhhcCCC
Q psy16830        508 DYFSCNY--CGKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       508 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  535 (712)
                      +||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3566655  777777777777777666653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.70  E-value=0.0021  Score=32.07  Aligned_cols=20  Identities=40%  Similarity=0.803  Sum_probs=8.4

Q ss_pred             cccCcCCcccCCchhHHhHH
Q psy16830        572 YKCSLCPKAFTYLGALEDHQ  591 (712)
Q Consensus       572 ~~C~~C~~~f~~~~~L~~H~  591 (712)
                      |+|.-|...|..+..|+.||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            34444444444444444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0029  Score=32.57  Aligned_cols=25  Identities=24%  Similarity=0.462  Sum_probs=18.7

Q ss_pred             cccCCCCccccCCchhhhhHHhhhc
Q psy16830        599 THLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      .|+|+.|+..-..+++|+.|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3677777777777777777777665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.0055  Score=31.66  Aligned_cols=25  Identities=36%  Similarity=0.547  Sum_probs=19.1

Q ss_pred             ceecCCcccccCChHHHHHHHHHhc
Q psy16830        186 SYKCSLCPKAFTHLAALEDHQYVHT  210 (712)
Q Consensus       186 ~~~C~~C~k~f~~~~~L~~H~~~H~  210 (712)
                      |-+|+.|.++.+++..|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4568888888888888888887774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0056  Score=31.64  Aligned_cols=25  Identities=32%  Similarity=0.392  Sum_probs=18.8

Q ss_pred             ccccCCCCcccCChHHHhhhhhhcC
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHIVIHS  533 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~~~H~  533 (712)
                      |-+|+.|.++.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467888888888888888877774

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0042  Score=35.72  Aligned_cols=28  Identities=43%  Similarity=0.653  Sum_probs=25.5

Q ss_pred             cCCCccC--ChhhhhhhChHHHHhHHhhhc
Q psy16830        671 LNKPFKC--DDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       671 ~~k~~~C--~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      .+|||.|  +-|+.+|.+..-|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3799999  789999999999999999884

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.0077  Score=34.60  Aligned_cols=28  Identities=39%  Similarity=0.616  Sum_probs=23.9

Q ss_pred             CCCCccC--ccChhccCCHHHHHHhHhhcC
Q psy16830         94 LNKPFKC--DDCDQCFLTKILLNKHKLLHT  121 (712)
Q Consensus        94 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  121 (712)
                      .+|||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3789999  569999999999999988773

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.93  E-value=0.0044  Score=31.04  Aligned_cols=23  Identities=35%  Similarity=1.022  Sum_probs=12.3

Q ss_pred             ccCcccccccCChhhHHhhhhhc
Q psy16830        538 FSCPVCKKQFKRKQDVAGHDRVV  560 (712)
Q Consensus       538 ~~C~~C~~~f~~~~~l~~H~~~~  560 (712)
                      |.|++|-+.|.++.++..|.+..
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            44555555555555555555443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.0082  Score=36.23  Aligned_cols=25  Identities=36%  Similarity=0.615  Sum_probs=21.1

Q ss_pred             CcccCcCCcccCCchhHHhHHhhhc
Q psy16830        571 SYKCSLCPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       571 ~~~C~~C~~~f~~~~~L~~H~~~H~  595 (712)
                      .|.|-.|+|.|+....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5788888888888888888888874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.69  E-value=0.0076  Score=30.88  Aligned_cols=23  Identities=22%  Similarity=0.324  Sum_probs=19.6

Q ss_pred             cccCCCCccccCCchhhhhHHhh
Q psy16830        599 THLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      ||+|..||+.+..+.+|..|-.+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            78999999999999999988643

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.65  E-value=0.01  Score=30.39  Aligned_cols=22  Identities=36%  Similarity=0.973  Sum_probs=18.0

Q ss_pred             CccCccChhccCCHHHHHHhHh
Q psy16830         97 PFKCDDCDQCFLTKILLNKHKL  118 (712)
Q Consensus        97 ~~~C~~C~~~f~~~~~l~~H~~  118 (712)
                      ||+|..||+.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888888854

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.0081  Score=30.90  Aligned_cols=24  Identities=42%  Similarity=0.783  Sum_probs=13.3

Q ss_pred             ccCcccccccCChhhHHhhhhhcc
Q psy16830        538 FSCPVCKKQFKRKQDVAGHDRVVH  561 (712)
Q Consensus       538 ~~C~~C~~~f~~~~~l~~H~~~~h  561 (712)
                      |+|+.|+....++++|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            455555555555555555555433

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.021  Score=34.39  Aligned_cols=25  Identities=36%  Similarity=0.650  Sum_probs=21.1

Q ss_pred             ceecCCcccccCChHHHHHHHHHhc
Q psy16830        186 SYKCSLCPKAFTHLAALEDHQYVHT  210 (712)
Q Consensus       186 ~~~C~~C~k~f~~~~~L~~H~~~H~  210 (712)
                      .|.|..|+|.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5789999999999988988888773

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.018  Score=32.39  Aligned_cols=24  Identities=33%  Similarity=0.329  Sum_probs=18.9

Q ss_pred             cCcCCcccCCchhHHhHHhhhcCC
Q psy16830        574 CSLCPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       574 C~~C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      |+-=++.|.....|..|+|+||||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456788999999999999986

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.06  E-value=0.033  Score=31.25  Aligned_cols=20  Identities=25%  Similarity=0.350  Sum_probs=15.5

Q ss_pred             CcccCChHHHhhhhhhcCCC
Q psy16830        516 GKTFLHKYKLRRHIVIHSTA  535 (712)
Q Consensus       516 ~k~f~~~~~L~~H~~~H~~~  535 (712)
                      ++.|.....|..|+|+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688888888888888775

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.06  Score=29.57  Aligned_cols=26  Identities=31%  Similarity=0.606  Sum_probs=20.9

Q ss_pred             ceecCCcccccCChHHHHHHHHHhcC
Q psy16830        186 SYKCSLCPKAFTHLAALEDHQYVHTG  211 (712)
Q Consensus       186 ~~~C~~C~k~f~~~~~L~~H~~~H~~  211 (712)
                      .|.|..|+++|.....+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58888888888888888888776554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.034  Score=30.55  Aligned_cols=23  Identities=13%  Similarity=0.467  Sum_probs=20.2

Q ss_pred             cccCCCCccccCCchhhhhHHhh
Q psy16830        599 THLCTMCPASYATIGGLRSHIKI  621 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~  621 (712)
                      .|.|..|++.|+.+..+.+|...
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            58899999999999999999754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.47  E-value=0.053  Score=28.87  Aligned_cols=27  Identities=37%  Similarity=0.634  Sum_probs=16.6

Q ss_pred             CcccCc--CCcccCCchhHHhHHhhhcCC
Q psy16830        571 SYKCSL--CPKAFTYLGALEDHQFVHTGQ  597 (712)
Q Consensus       571 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~  597 (712)
                      .|.|+.  |+..|...-.|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455544  666666666666666666664

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.42  E-value=0.042  Score=30.32  Aligned_cols=29  Identities=28%  Similarity=0.594  Sum_probs=24.6

Q ss_pred             CCCcccCCCCccccCCchhhhhHHhhhcc
Q psy16830        596 GQKTHLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       596 ~~k~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      |+..|+|.+|.+.++..+++-+|....|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            56679999999999999999999888774

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.25  E-value=0.047  Score=27.77  Aligned_cols=24  Identities=50%  Similarity=0.815  Sum_probs=17.5

Q ss_pred             cccC--cCCcccCCchhHHhHHhhhc
Q psy16830        572 YKCS--LCPKAFTYLGALEDHQFVHT  595 (712)
Q Consensus       572 ~~C~--~C~~~f~~~~~L~~H~~~H~  595 (712)
                      |.|.  -|+++|..-.+|..|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4454  38888888888888887775

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.13  E-value=0.081  Score=31.68  Aligned_cols=28  Identities=25%  Similarity=0.561  Sum_probs=24.1

Q ss_pred             CCCcccCCCCccccCCchhhhhHHhhhc
Q psy16830        596 GQKTHLCTMCPASYATIGGLRSHIKIVH  623 (712)
Q Consensus       596 ~~k~~~C~~C~~~f~~~~~L~~H~~~~H  623 (712)
                      .+.|-.|++|+...+++.+|++|+...|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4678889999999999999999988877

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.98  E-value=0.15  Score=27.08  Aligned_cols=28  Identities=39%  Similarity=0.697  Sum_probs=22.4

Q ss_pred             cceecCC--cccccCChHHHHHHHHHhcCC
Q psy16830        185 KSYKCSL--CPKAFTHLAALEDHQYVHTGQ  212 (712)
Q Consensus       185 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  212 (712)
                      +.|.|.+  |+-.|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3577865  888888888899998888875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.69  E-value=0.13  Score=27.93  Aligned_cols=22  Identities=27%  Similarity=0.534  Sum_probs=16.8

Q ss_pred             CccCccChhccCCHHHHHHhHh
Q psy16830         97 PFKCDDCDQCFLTKILLNKHKL  118 (712)
Q Consensus        97 ~~~C~~C~~~f~~~~~l~~H~~  118 (712)
                      .|.|.-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888877764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.69  E-value=0.2  Score=26.11  Aligned_cols=20  Identities=30%  Similarity=0.722  Sum_probs=8.7

Q ss_pred             cccCcCccccCChhHHHHHH
Q psy16830        320 FTCNSCGLIFSEKKYLRNHM  339 (712)
Q Consensus       320 ~~C~~C~~~f~~~~~l~~H~  339 (712)
                      |.|..||+...+...++.|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            34444444444444444443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.39  E-value=0.17  Score=25.69  Aligned_cols=24  Identities=46%  Similarity=0.816  Sum_probs=18.4

Q ss_pred             eecC--CcccccCChHHHHHHHHHhc
Q psy16830        187 YKCS--LCPKAFTHLAALEDHQYVHT  210 (712)
Q Consensus       187 ~~C~--~C~k~f~~~~~L~~H~~~H~  210 (712)
                      |.|.  .|++.|.....|+.|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5554  48888888888888888775

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.99  E-value=0.18  Score=26.03  Aligned_cols=18  Identities=33%  Similarity=0.724  Sum_probs=14.0

Q ss_pred             CCcccCChHHHhhhhhhc
Q psy16830        515 CGKTFLHKYKLRRHIVIH  532 (712)
Q Consensus       515 C~k~f~~~~~L~~H~~~H  532 (712)
                      |+|.|+..++++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777888888888777766

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.067  Score=36.20  Aligned_cols=27  Identities=19%  Similarity=0.288  Sum_probs=23.5

Q ss_pred             ccCCCccCChhhhhhhChHHHHhHHhh
Q psy16830        670 ALNKPFKCDDCDQRFLTKILLNKHKLL  696 (712)
Q Consensus       670 ~~~k~~~C~~C~~~f~~~~~L~~H~~~  696 (712)
                      .|...|.|..|++.|.+..+|..|++.
T Consensus        11 pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          11 PGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCEEecccccCccCCHHHHHHHHcc
Confidence            345669999999999999999999864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.29  E-value=0.15  Score=26.31  Aligned_cols=19  Identities=32%  Similarity=0.515  Sum_probs=16.5

Q ss_pred             CcccccCChHHHHHHHHHh
Q psy16830        191 LCPKAFTHLAALEDHQYVH  209 (712)
Q Consensus       191 ~C~k~f~~~~~L~~H~~~H  209 (712)
                      -|++.|++.+.++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4889999999999998887

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.67  E-value=0.25  Score=25.70  Aligned_cols=26  Identities=19%  Similarity=0.563  Sum_probs=16.7

Q ss_pred             cccCCCCccccCCchhhhhHHhhhcc
Q psy16830        599 THLCTMCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      .|.|..|++...+...++-|+..-|+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            35666777777777777766665553

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.21  E-value=0.23  Score=25.83  Aligned_cols=27  Identities=22%  Similarity=0.556  Sum_probs=21.4

Q ss_pred             CcccCC--CCccccCCchhhhhHHhhhcc
Q psy16830        598 KTHLCT--MCPASYATIGGLRSHIKIVHH  624 (712)
Q Consensus       598 k~~~C~--~C~~~f~~~~~L~~H~~~~H~  624 (712)
                      +.|.|.  -|+..|+++.+++.|..+.|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            356774  599999999999999888774

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.85  E-value=0.17  Score=29.46  Aligned_cols=12  Identities=33%  Similarity=0.800  Sum_probs=6.7

Q ss_pred             CccccCCCCccc
Q psy16830        508 DYFSCNYCGKTF  519 (712)
Q Consensus       508 ~~~~C~~C~k~f  519 (712)
                      +.|.|..||+.+
T Consensus         4 ~~~~C~vCG~i~   15 (37)
T d1nnqa2           4 KVYICPICGYTA   15 (37)
T ss_dssp             CEEECTTTCCEE
T ss_pred             cEEECCCCCCEe
Confidence            345666666543

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.42  E-value=0.4  Score=29.40  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=27.1

Q ss_pred             cCCCcccCCC--CccccCCchhhhhHHhhhccCC
Q psy16830        595 TGQKTHLCTM--CPASYATIGGLRSHIKIVHHGL  626 (712)
Q Consensus       595 ~~~k~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  626 (712)
                      ..-+||.|-.  |..+|+-..+|.-|++.+|...
T Consensus        16 spyrpyrcvhqgc~aaftiq~nlilhy~avh~s~   49 (61)
T d1x3ca1          16 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD   49 (61)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred             CCCCceeeeccchhhhhhhhhhHHHHHHHHhhhc
Confidence            3568899965  9999999999999999999653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.34  E-value=0.39  Score=25.99  Aligned_cols=21  Identities=33%  Similarity=0.572  Sum_probs=10.8

Q ss_pred             ccccCCCCcccCChHHHhhhh
Q psy16830        509 YFSCNYCGKTFLHKYKLRRHI  529 (712)
Q Consensus       509 ~~~C~~C~k~f~~~~~L~~H~  529 (712)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            345555555555555555553

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.33  E-value=0.34  Score=28.91  Aligned_cols=24  Identities=25%  Similarity=0.481  Sum_probs=13.2

Q ss_pred             CCccccCCCCcccCChHHHhhhhh
Q psy16830        507 KDYFSCNYCGKTFLHKYKLRRHIV  530 (712)
Q Consensus       507 ~~~~~C~~C~k~f~~~~~L~~H~~  530 (712)
                      +.|-.|++|+.......+|++|+.
T Consensus        22 ~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHH
Confidence            344455555555555555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.26  E-value=0.093  Score=34.77  Aligned_cols=36  Identities=22%  Similarity=0.498  Sum_probs=28.0

Q ss_pred             CCCccCChhhhhhhChHHHHhHHhhhcCCCccccccccC
Q psy16830        672 NKPFKCDDCDQRFLTKILLNKHKLLHFDKDYFSCNYCGK  710 (712)
Q Consensus       672 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  710 (712)
                      ...|.|+.|+++|....++..   +-.....|.|.+|+-
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            356999999999988777654   444556899999974

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.20  E-value=0.15  Score=33.74  Aligned_cols=37  Identities=22%  Similarity=0.485  Sum_probs=23.7

Q ss_pred             CCCccCccChhccCCHHHHHHhHhhcCCCCCcCcchhHh
Q psy16830         95 NKPFKCDDCDQCFLTKILLNKHKLLHTEGHLTCNLCGQT  133 (712)
Q Consensus        95 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~  133 (712)
                      ...|+|+.|+++|.....+..  .-...+.|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh--cCcCCCeEEecCCCCE
Confidence            345889999888876554432  2234566777777643

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=83.42  E-value=0.28  Score=28.32  Aligned_cols=25  Identities=24%  Similarity=0.704  Sum_probs=13.8

Q ss_pred             CccccCCCCcccCChHHHhhhhhhcCCCCcccCccccc
Q psy16830        508 DYFSCNYCGKTFLHKYKLRRHIVIHSTARPFSCPVCKK  545 (712)
Q Consensus       508 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~C~~  545 (712)
                      +.|.|.+||+..             .|+.|-.|++|+.
T Consensus         4 ~~~vC~vCGyi~-------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           4 KFHLCPICGYIH-------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CEEECSSSCCEE-------------ESSCCSBCTTTCC
T ss_pred             CEEECCCCCCEe-------------eCCCCCcCCCCCC
Confidence            445666666543             2344556666653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.95  E-value=0.29  Score=31.64  Aligned_cols=29  Identities=24%  Similarity=0.563  Sum_probs=25.7

Q ss_pred             ccCCCccCChhhhhhhChHHHHhHHhhhc
Q psy16830        670 ALNKPFKCDDCDQRFLTKILLNKHKLLHF  698 (712)
Q Consensus       670 ~~~k~~~C~~C~~~f~~~~~L~~H~~~H~  698 (712)
                      .+...|+|..|.-.|.+...|..|+..|.
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34456999999999999999999999985