Psyllid ID: psy16836


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MSFPGPGHRRLDLAFSSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLDP
ccccccccccccccccccccccccccccccccEEcccccHHHHcccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccc
cccccccccccccccccccccccccEEEcccEEEccHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccHHHHHHcHHHHccccccccccHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEEEcccccc
msfpgpghrrldlafssknavgpdhvyaipkrqvlkdsdmkqwenseayHEYQGFILSMNEAVrgkaidtrlepsnnVMSVFQMLEHFNKlidetppidqpqrfgNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKEsfgnstridygtgHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCeyrmepagshgvwslddyqfvpfiwgssqlfgnkdeiepnmfLLERTVLDHRDKYMFLACIQYIMKVKtghfsehsnqlwnisalpswsKINQGLLKMykgevlakfpvistrpcldp
msfpgpghrRLDLAfssknavgpdhvYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEvlakfpvistrpcldp
MSFPGPGHRRLDLAFSSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLDP
***********************DHVYAIPKRQVL******QWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVIST******
***************************AIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPID***RFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLD*
MSFPGPGHRRLDLAFSSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLDP
*********************GPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLDP
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MSFPGPGHRRLDLAFSSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCLDP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q2KJ44324 Serine/threonine-protein yes N/A 0.924 0.910 0.523 1e-91
Q28717323 Serine/threonine-protein yes N/A 0.890 0.879 0.540 2e-91
P58389323 Serine/threonine-protein yes N/A 0.890 0.879 0.533 5e-91
Q15257358 Serine/threonine-protein no N/A 0.924 0.824 0.474 3e-87
Q55CJ3325 Probable serine/threonine yes N/A 0.902 0.886 0.427 1e-69
P0CQ02382 Serine/threonine-protein yes N/A 0.899 0.751 0.379 1e-56
P0CQ03382 Serine/threonine-protein N/A N/A 0.899 0.751 0.379 1e-56
Q54WH6 468 Probable serine/threonine no N/A 0.887 0.604 0.376 9e-56
Q4PCR0457 Serine/threonine-protein N/A N/A 0.890 0.621 0.386 9e-55
Q59ST6358 Serine/threonine-protein N/A N/A 0.877 0.782 0.376 2e-52
>sp|Q2KJ44|PTPA_BOVIN Serine/threonine-protein phosphatase 2A activator OS=Bos taurus GN=PPP2R4 PE=2 SV=1 Back     alignment and function desciption
 Score =  336 bits (862), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 155/296 (52%), Positives = 212/296 (71%), Gaps = 1/296 (0%)

Query: 16  SSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPS 75
           SS++A      + IPK+++    DM +W+ S+AY +Y GFIL++NE V+GK +    + S
Sbjct: 12  SSEDAPPTTQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLSFEYKVS 71

Query: 76  NNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAA 135
             +  +  +L   ++ IDETPP+DQP RFGNKA+  W  K+ +  E  +   +P    AA
Sbjct: 72  EAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDQEAENLVATVVPTNLAAA 131

Query: 136 IPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDL 195
           +PE++VYLKES GNSTRIDYGTGHE AF  FL CL +IG   ++D++A+V ++F RYL++
Sbjct: 132 VPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEV 191

Query: 196 VRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDK 255
           +R+LQ  YRMEPAGS GVW LDD+QF+PFIWGSSQL  +   +EP  F+ E+ V ++   
Sbjct: 192 MRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLI-DHPYLEPRHFVDEKAVNENHKD 250

Query: 256 YMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
           YMFL CI +I ++KTG F+EHSNQLWNISA+PSWSK+NQGL++MYK E L KFPVI
Sbjct: 251 YMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVI 306




PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Acts as a regulatory subunit for serine/threonine-protein phosphatase 2A (PP2A) modulating its activity or substrate specificity, probably by inducing a conformational change in the catalytic subunit, a proposed direct target of the PPIase. Can reactivate inactive phosphatase PP2A-phosphatase methylesterase complexes (PP2A(i)) in presence of ATP and Mg(2+) (By similarity). Reversibly stimulates the variable phosphotyrosyl phosphatase activity of PP2A core heterodimer PP2A(D) in presence of ATP and Mg(2+) (in vitro). The phosphotyrosyl phosphatase activity is dependent of an ATPase activty of the PP2A(D):PPP2R4 complex. Is involved in apoptosis; the function appears to be independent from PP2A.
Bos taurus (taxid: 9913)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8
>sp|Q28717|PTPA_RABIT Serine/threonine-protein phosphatase 2A activator OS=Oryctolagus cuniculus GN=PPP2R4 PE=1 SV=1 Back     alignment and function description
>sp|P58389|PTPA_MOUSE Serine/threonine-protein phosphatase 2A activator OS=Mus musculus GN=Ppp2r4 PE=1 SV=1 Back     alignment and function description
>sp|Q15257|PTPA_HUMAN Serine/threonine-protein phosphatase 2A activator OS=Homo sapiens GN=PPP2R4 PE=1 SV=3 Back     alignment and function description
>sp|Q55CJ3|PTPA1_DICDI Probable serine/threonine-protein phosphatase 2A activator 1 OS=Dictyostelium discoideum GN=ppp2r4A PE=3 SV=1 Back     alignment and function description
>sp|P0CQ02|PTPA2_CRYNJ Serine/threonine-protein phosphatase 2A activator 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RRD2 PE=3 SV=1 Back     alignment and function description
>sp|P0CQ03|PTPA2_CRYNB Serine/threonine-protein phosphatase 2A activator 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RRD2 PE=3 SV=1 Back     alignment and function description
>sp|Q54WH6|PTPA2_DICDI Probable serine/threonine-protein phosphatase 2A activator 2 OS=Dictyostelium discoideum GN=ppp2r4B PE=3 SV=1 Back     alignment and function description
>sp|Q4PCR0|PTPA2_USTMA Serine/threonine-protein phosphatase 2A activator 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=RRD2 PE=3 SV=1 Back     alignment and function description
>sp|Q59ST6|PTPA2_CANAL Serine/threonine-protein phosphatase 2A activator 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RRD2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
350402427333 PREDICTED: serine/threonine-protein phos 0.924 0.885 0.599 1e-101
340711795333 PREDICTED: serine/threonine-protein phos 0.924 0.885 0.595 1e-101
380029843333 PREDICTED: serine/threonine-protein phos 0.924 0.885 0.589 1e-100
328778848333 PREDICTED: serine/threonine-protein phos 0.924 0.885 0.592 1e-100
383861236339 PREDICTED: serine/threonine-protein phos 0.924 0.870 0.599 1e-100
307209214337 Serine/threonine-protein phosphatase 2A 0.902 0.854 0.603 2e-98
307191280341 Serine/threonine-protein phosphatase 2A 0.902 0.844 0.603 6e-98
242006559355 serine/threonine-protein phosphatase 2A 0.912 0.819 0.589 7e-98
345480066337 PREDICTED: serine/threonine-protein phos 0.924 0.875 0.574 1e-97
332019804331 Serine/threonine-protein phosphatase 2A 0.896 0.864 0.592 2e-97
>gi|350402427|ref|XP_003486480.1| PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Bombus impatiens] Back     alignment and taxonomy information
 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/297 (59%), Positives = 222/297 (74%), Gaps = 2/297 (0%)

Query: 16  SSKNAVGPD-HVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEP 74
           +SK+ V PD H + +PK+ +   SDM  WE SEAY EY GFIL++NE+V+GKA++     
Sbjct: 3   TSKSPVNPDDHEFVVPKKSIKVPSDMVIWEKSEAYFEYLGFILALNESVQGKALNVEYTQ 62

Query: 75  SNNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHA 134
           S  + S+ QML  F++ I + PP +QPQRFGNK+F +W  ++ +    ELQK LPEK H 
Sbjct: 63  SPTIASIVQMLNEFDEWITQIPPTEQPQRFGNKSFREWHERLQQNGIAELQKVLPEKLHR 122

Query: 135 AIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLD 194
           A+PEI  YL E FGN TRIDYGTGHEMAF MFL C+F+IGAF+ +D+VAVV +IF RYL+
Sbjct: 123 AVPEIVQYLYEGFGNPTRIDYGTGHEMAFLMFLCCMFKIGAFTQDDKVAVVVKIFNRYLE 182

Query: 195 LVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRD 254
           LVRRLQ  YRMEPAGSHGVWSLDDYQFVPFIWGS+QL G+   IEP  F+    +     
Sbjct: 183 LVRRLQLTYRMEPAGSHGVWSLDDYQFVPFIWGSAQLIGHP-RIEPRHFVEPDIIQAFNK 241

Query: 255 KYMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
           +YMFL CI++I KVK G F+EHSNQLWN+SA+ SW K+N GL+KMY+ EVLAKFPVI
Sbjct: 242 QYMFLGCIEFISKVKIGPFAEHSNQLWNVSAVSSWVKVNNGLIKMYRAEVLAKFPVI 298




Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711795|ref|XP_003394454.1| PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|380029843|ref|XP_003698574.1| PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Apis florea] Back     alignment and taxonomy information
>gi|328778848|ref|XP_392956.3| PREDICTED: serine/threonine-protein phosphatase 2A activator [Apis mellifera] Back     alignment and taxonomy information
>gi|383861236|ref|XP_003706092.1| PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307209214|gb|EFN86321.1| Serine/threonine-protein phosphatase 2A regulatory subunit B' [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307191280|gb|EFN74927.1| Serine/threonine-protein phosphatase 2A regulatory subunit B' [Camponotus floridanus] Back     alignment and taxonomy information
>gi|242006559|ref|XP_002424117.1| serine/threonine-protein phosphatase 2A regulatory subunit B', putative [Pediculus humanus corporis] gi|212507434|gb|EEB11379.1| serine/threonine-protein phosphatase 2A regulatory subunit B', putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|345480066|ref|XP_001606279.2| PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332019804|gb|EGI60265.1| Serine/threonine-protein phosphatase 2A regulatory subunit B' [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
UNIPROTKB|Q2KJ44324 PPP2R4 "Serine/threonine-prote 0.924 0.910 0.523 3.4e-84
UNIPROTKB|Q28717323 PPP2R4 "Serine/threonine-prote 0.890 0.879 0.540 4.4e-84
MGI|MGI:1346006323 Ppp2r4 "protein phosphatase 2A 0.890 0.879 0.533 1.5e-83
ZFIN|ZDB-GENE-040801-11324 ppp2r4 "protein phosphatase 2A 0.890 0.876 0.536 1.9e-83
UNIPROTKB|F1RR44357 PPP2R4 "Uncharacterized protei 0.742 0.663 0.563 3.1e-83
UNIPROTKB|Q5ZM56321 LOC100859123 "Uncharacterized 0.890 0.884 0.526 6.4e-83
UNIPROTKB|F1PD37323 PPP2R4 "Uncharacterized protei 0.890 0.879 0.533 8.2e-83
UNIPROTKB|A6PVN5329 PPP2R4 "Serine/threonine-prote 0.924 0.896 0.516 4.5e-82
UNIPROTKB|A6PVN9263 PPP2R4 "Serine/threonine-prote 0.824 1.0 0.541 3e-78
UNIPROTKB|Q15257358 PPP2R4 "Serine/threonine-prote 0.742 0.662 0.567 3.6e-73
UNIPROTKB|Q2KJ44 PPP2R4 "Serine/threonine-protein phosphatase 2A activator" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
 Identities = 155/296 (52%), Positives = 212/296 (71%)

Query:    16 SSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPS 75
             SS++A      + IPK+++    DM +W+ S+AY +Y GFIL++NE V+GK +    + S
Sbjct:    12 SSEDAPPTTQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLSFEYKVS 71

Query:    76 NNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAA 135
               +  +  +L   ++ IDETPP+DQP RFGNKA+  W  K+ +  E  +   +P    AA
Sbjct:    72 EAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDQEAENLVATVVPTNLAAA 131

Query:   136 IPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDL 195
             +PE++VYLKES GNSTRIDYGTGHE AF  FL CL +IG   ++D++A+V ++F RYL++
Sbjct:   132 VPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEV 191

Query:   196 VRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDK 255
             +R+LQ  YRMEPAGS GVW LDD+QF+PFIWGSSQL  +   +EP  F+ E+ V ++   
Sbjct:   192 MRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHP-YLEPRHFVDEKAVNENHKD 250

Query:   256 YMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
             YMFL CI +I ++KTG F+EHSNQLWNISA+PSWSK+NQGL++MYK E L KFPVI
Sbjct:   251 YMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVI 306




GO:0005737 "cytoplasm" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0051721 "protein phosphatase 2A binding" evidence=IEA
GO:0043065 "positive regulation of apoptotic process" evidence=IEA
GO:0042803 "protein homodimerization activity" evidence=IEA
GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA
GO:0035307 "positive regulation of protein dephosphorylation" evidence=IEA
GO:0034704 "calcium channel complex" evidence=IEA
GO:0032516 "positive regulation of phosphoprotein phosphatase activity" evidence=IEA
GO:0032515 "negative regulation of phosphoprotein phosphatase activity" evidence=IEA
GO:0016887 "ATPase activity" evidence=IEA
GO:0008160 "protein tyrosine phosphatase activator activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005102 "receptor binding" evidence=IEA
GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA
GO:0006457 "protein folding" evidence=IEA
UNIPROTKB|Q28717 PPP2R4 "Serine/threonine-protein phosphatase 2A activator" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms
MGI|MGI:1346006 Ppp2r4 "protein phosphatase 2A, regulatory subunit B (PR 53)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-11 ppp2r4 "protein phosphatase 2A activator, regulatory subunit 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RR44 PPP2R4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZM56 LOC100859123 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PD37 PPP2R4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A6PVN5 PPP2R4 "Serine/threonine-protein phosphatase 2A activator" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A6PVN9 PPP2R4 "Serine/threonine-protein phosphatase 2A activator" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q15257 PPP2R4 "Serine/threonine-protein phosphatase 2A activator" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q75BY1PTPA2_ASHGO5, ., 2, ., 1, ., 80.34730.87770.7799yesN/A
Q6CKF0PTPA2_KLULA5, ., 2, ., 1, ., 80.35410.87460.775yesN/A
Q28717PTPA_RABIT5, ., 2, ., 1, ., 80.54030.89020.8792yesN/A
Q9P7H4PTPA2_SCHPO5, ., 2, ., 1, ., 80.38240.87770.7954yesN/A
P0CQ02PTPA2_CRYNJ5, ., 2, ., 1, ., 80.37930.89960.7513yesN/A
P40454PTPA1_YEAST5, ., 2, ., 1, ., 80.37580.89340.7251yesN/A
Q6FK00PTPA2_CANGA5, ., 2, ., 1, ., 80.39230.88400.7877yesN/A
Q4WSA8PTPA2_ASPFU5, ., 2, ., 1, ., 80.36640.89340.6753yesN/A
Q6CFX5PTPA1_YARLI5, ., 2, ., 1, ., 80.32230.88400.6527yesN/A
Q55CJ3PTPA1_DICDI5, ., 2, ., 1, ., 80.42700.90280.8861yesN/A
Q4I0M9PTPA1_GIBZE5, ., 2, ., 1, ., 80.35290.89020.6382yesN/A
Q2UCL6PTPA2_ASPOR5, ., 2, ., 1, ., 80.37670.89340.6753yesN/A
P58389PTPA_MOUSE5, ., 2, ., 1, ., 80.53330.89020.8792yesN/A
Q2KJ44PTPA_BOVIN5, ., 2, ., 1, ., 80.52360.92470.9104yesN/A
Q6BU97PTPA2_DEBHA5, ., 2, ., 1, ., 80.36120.90590.7874yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.2.10.921
4th Layer5.2.1.80.914

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
pfam03095298 pfam03095, PTPA, Phosphotyrosyl phosphate activato 1e-142
cd04087266 cd04087, PTPA, Phosphotyrosyl phosphatase activato 1e-137
COG5057353 COG5057, LAG1, Phosphotyrosyl phosphatase activato 8e-95
>gnl|CDD|217364 pfam03095, PTPA, Phosphotyrosyl phosphate activator (PTPA) protein Back     alignment and domain information
 Score =  401 bits (1034), Expect = e-142
 Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 2/283 (0%)

Query: 30  PKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFN 89
           P +++L  SD++ +  S+AY++   FI  ++++V+GK I      S  V  + ++L+  +
Sbjct: 1   PVKRILSPSDLELFLRSQAYYDILAFIQKLSDSVQGKPISDTFPISPAVRKLLEILDKLD 60

Query: 90  KLIDETPPIDQ-PQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFG 148
            LIDETPP+DQ P RFGNKAF  W +K+ E   + L + LP     AI E+S YL  SFG
Sbjct: 61  ALIDETPPLDQNPSRFGNKAFRDWHDKLEERAPSLLSELLPSSKDEAINELSYYLLNSFG 120

Query: 149 NSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRMEPA 208
           N TRIDYGTGHE+ F  FLLCLF++G  +  D  A+V R+F RYL+L+RRLQ  Y +EPA
Sbjct: 121 NRTRIDYGTGHELNFLAFLLCLFKLGILTEEDEGALVLRVFARYLELMRRLQLTYWLEPA 180

Query: 209 GSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIMKV 268
           GSHGVW LDDYQF+PFI+G++QL G+   I+P     E  V ++RD+Y++L CI +I KV
Sbjct: 181 GSHGVWGLDDYQFLPFIFGAAQLLGHP-PIKPKSIHNEEIVEEYRDEYLYLGCIAFINKV 239

Query: 269 KTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
           KTG F EHS  L +IS + SWSK+NQGL+KMYK EVL KFPV+
Sbjct: 240 KTGPFREHSPMLDDISGVKSWSKVNQGLIKMYKAEVLGKFPVV 282


Phosphotyrosyl phosphatase activator (PTPA) proteins stimulate the phosphotyrosyl phosphatase (PTPase) activity of the dimeric form of protein phosphatase 2A (PP2A). PTPase activity in PP2A (in vitro) is relatively low when compared to the better recognised phosphoserine/ threonine protein phosphorylase activity. The specific biological role of PTPA is unknown, Basal expression of PTPA depends on the activity of a ubiquitous transcription factor, Yin Yang 1 (YY1). The tumour suppressor protein p53 can inhibit PTPA expression through an unknown mechanism that negatively controls YY1. Length = 298

>gnl|CDD|239754 cd04087, PTPA, Phosphotyrosyl phosphatase activator (PTPA) is also known as protein phosphatase 2A (PP2A) phosphatase activator Back     alignment and domain information
>gnl|CDD|227390 COG5057, LAG1, Phosphotyrosyl phosphatase activator [Cell division and chromosome partitioning / Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PF03095299 PTPA: Phosphotyrosyl phosphate activator (PTPA) pr 100.0
KOG2867|consensus367 100.0
cd04087266 PTPA Phosphotyrosyl phosphatase activator (PTPA) i 100.0
COG5057353 LAG1 Phosphotyrosyl phosphatase activator [Cell di 100.0
>PF03095 PTPA: Phosphotyrosyl phosphate activator (PTPA) protein; InterPro: IPR004327 Phosphotyrosyl phosphatase activator (PTPA) proteins stimulate the phosphotyrosyl phosphatase (PTPase) activity of the dimeric form of protein phosphatase 2A (PP2A) Back     alignment and domain information
Probab=100.00  E-value=1.5e-131  Score=942.35  Aligned_cols=287  Identities=52%  Similarity=0.928  Sum_probs=269.5

Q ss_pred             cccceecCccchhhhhcCHhHHHHHHHHHHHHHhcCCCCCC-CCCCCCHhHHHHHHHHHHHHHhhhhCCCCCC-CCCCCc
Q psy16836         29 IPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAID-TRLEPSNNVMSVFQMLEHFNKLIDETPPIDQ-PQRFGN  106 (319)
Q Consensus        29 ~P~K~I~~~~D~~~f~~S~Ay~~i~~fI~~l~~av~g~~~~-~~~~~S~~v~~l~~iL~~l~~~i~e~PP~~~-p~RFGN  106 (319)
                      +|+|||.+++||++|++|+||++|+.||++||++|+|++++ ++.+.|++|++++++|++|++||+|+||+++ |+||||
T Consensus         1 ~P~KrI~~~~D~~~f~~S~Ay~~i~~FI~~l~~sV~g~~~~~~~~~~S~~v~~ll~iL~~l~~~i~e~PP~~~~p~RFGN   80 (299)
T PF03095_consen    1 TPVKRILSPEDMEKFKRSQAYADIIGFIQNLNESVKGKKLSTDDYPVSENVQKLLDILDTLEQWIDEIPPVDQGPSRFGN   80 (299)
T ss_dssp             --EE---SCCHHHHHHTSHHHHHHHHHHHHHHHHHTT-STTTSTSSSSHHHHHHHHHHHHHHHHHHTS---SS-STTSS-
T ss_pred             CCcceECCHhHHHHHcCCHHHHHHHHHHHHHHHHccCCCCCCcccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence            59999999999999999999999999999999999999999 8999999999999999999999999999998 999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHhCCccccccHHHHHHHHHhccCCCcccccCChhHHHHHHHHHHHHhhCCcCCCccchhhH
Q psy16836        107 KAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVN  186 (319)
Q Consensus       107 ~AfR~W~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRIDYGTGHEL~Fl~fL~~L~klgil~~~d~~a~vL  186 (319)
                      +|||+|++||++++++|+++++|+..+++++||+.||.+||||+|||||||||||||+||||||+++|+++.+|..++||
T Consensus        81 ~AfR~w~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRiDYGTGHEL~Fl~fL~~L~~lg~l~~~d~~a~vL  160 (299)
T PF03095_consen   81 KAFRTWHDKLEEEAPSLLEDILPSSLCGAIIELSYYLLNSFGNSTRIDYGTGHELSFLAFLCCLFKLGILTEEDYPALVL  160 (299)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHSTGGGGGGHHHHHHHHHTSSSBTTTTEEEHHHHHHHHHHHHHHHHTTSSTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHhCcCCCeeeecCcHHHHHHHHHHHHHHHcCCCCccccceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHhhccccCCCCcccccCCcccchhhhhhccccCCCCCCCCccccchhhHhhhcCCCccHHHHHHHH
Q psy16836        187 RIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIM  266 (319)
Q Consensus       187 ~vF~~Yl~lvR~Lq~~Y~LEPAGSHGvWGLDDy~fLPfi~GsaQL~~~~~~~~P~~i~d~~iv~~~~~~yly~~~I~~I~  266 (319)
                      +||.||+++||+||++|+|||||||||||||||||||||||||| +.| +.++|++|+|+++|++|+++|||++||+||+
T Consensus       161 ~vF~~Yl~l~R~Lq~~Y~LEPAGSHGVWGLDDy~fLPfi~GsaQ-~~~-~~~~P~~i~~~~~v~~~~~~yly~~~I~fI~  238 (299)
T PF03095_consen  161 RVFNRYLELVRRLQSTYRLEPAGSHGVWGLDDYQFLPFIFGSAQ-LDH-PPIKPKSILDPDIVEEYRDDYLYLDCIDFIN  238 (299)
T ss_dssp             THHHHHHHHHHHHHHHCT-EECSCCCCCSSSSS-SHHHHHHHHH-TTT-SSGGGGGGGSHHHHHHHTTT-HHHHHHHHHH
T ss_pred             eeHHHHHHHHHHHHHheeeccCCCCCCCccccceeecccccccc-ccC-CCCChHHhcCHHHHHHhcccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999 788 8999999999999999999999999999999


Q ss_pred             HhCccCccccchhhhcccCCCChHHHhHHHHHHHHHhhcCCCccccccccC
Q psy16836        267 KVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCL  317 (319)
Q Consensus       267 ~~K~gpf~ehSp~L~dIs~v~sW~KVn~GliKMY~~EVL~KfpVvQHf~~~  317 (319)
                      ++|+|||+||||||||||+|++|+|||+||||||++|||+||||||||+|.
T Consensus       239 ~~K~gpf~ehSp~L~~Is~v~~W~KV~~GliKMY~~EVL~KfpVvQHf~FG  289 (299)
T PF03095_consen  239 KVKTGPFREHSPMLWDISGVPSWSKVNSGLIKMYKAEVLGKFPVVQHFWFG  289 (299)
T ss_dssp             HHTTS-HHHHSHHHHHHTTSSSHHHHHHHHHHHHHHHTTT-HHHHTTSEBB
T ss_pred             HhCCCcHHHHhHHHHhhhcCCCCcchhhHHHHHHHHHHhhcchhhhhhhhh
Confidence            999999999999999999999999999999999999999999999999995



PTPase activity in PP2A (in vitro) is relatively low when compared to the better recognised phosphoserine/ threonine protein phosphorylase activity. The specific biological role of PTPA is unknown, Basal expression of PTPA depends on the activity of a ubiquitous transcription factor, Yin Yang 1 (YY1). The tumour suppressor protein p53 can inhibit PTPA expression through an unknown mechanism that negatively controls YY1 [].; GO: 0019211 phosphatase activator activity; PDB: 2HV7_H 2HV6_A 2IXM_A 2G62_A 2IXN_B 2IXO_B 2IXP_B.

>KOG2867|consensus Back     alignment and domain information
>cd04087 PTPA Phosphotyrosyl phosphatase activator (PTPA) is also known as protein phosphatase 2A (PP2A) phosphatase activator Back     alignment and domain information
>COG5057 LAG1 Phosphotyrosyl phosphatase activator [Cell division and chromosome partitioning / Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
2hv6_A323 Crystal Structure Of The Phosphotyrosyl Phosphatase 1e-92
2g62_A325 Crystal Structure Of Human Ptpa Length = 325 2e-92
2ixm_A303 Structure Of Human Ptpa Length = 303 4e-92
2ixp_A323 Crystal Structure Of The Pp2a Phosphatase Activator 4e-50
2ixo_A323 Crystal Structure Of The Pp2a Phosphatase Activator 2e-49
2ixn_A310 Crystal Structure Of The Pp2a Phosphatase Activator 3e-49
>pdb|2HV6|A Chain A, Crystal Structure Of The Phosphotyrosyl Phosphatase Activator Length = 323 Back     alignment and structure

Iteration: 1

Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 156/296 (52%), Positives = 210/296 (70%), Gaps = 1/296 (0%) Query: 16 SSKNAVGPDHVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPS 75 SS+ A + IPK+++ DM +W+ S+AY +Y GFIL++NE V+GK + S Sbjct: 12 SSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFEYRVS 71 Query: 76 NNVMSVFQMLEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAA 135 + + +L ++ IDETPP+DQP RFGNKA+ W K+ E E + +P AA Sbjct: 72 EAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAA 131 Query: 136 IPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDL 195 +PE++VYLKES GNSTRIDYGTGHE AF FL CL +IG ++D++A+V ++F RYL++ Sbjct: 132 VPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEV 191 Query: 196 VRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDK 255 +R+LQ YRMEPAGS GVW LDD+QF+PFIWGSSQL + +EP F+ E+ V ++ Sbjct: 192 MRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLI-DHPYLEPRHFVDEKAVNENHKD 250 Query: 256 YMFLACIQYIMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311 YMFL CI +I ++KTG F+EHSNQLWNISA+PSWSK+NQGL++MYK E L KFPVI Sbjct: 251 YMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVI 306
>pdb|2G62|A Chain A, Crystal Structure Of Human Ptpa Length = 325 Back     alignment and structure
>pdb|2IXM|A Chain A, Structure Of Human Ptpa Length = 303 Back     alignment and structure
>pdb|2IXP|A Chain A, Crystal Structure Of The Pp2a Phosphatase Activator Ypa1 Ptpa1 In Complex With Model Substrate Length = 323 Back     alignment and structure
>pdb|2IXO|A Chain A, Crystal Structure Of The Pp2a Phosphatase Activator Ypa1 Ptpa1 Length = 323 Back     alignment and structure
>pdb|2IXN|A Chain A, Crystal Structure Of The Pp2a Phosphatase Activator Ypa2 Ptpa2 Length = 310 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
2ixm_A303 Serine/threonine-protein phosphatase 2A regulatory 1e-133
2ixn_A310 Serine/threonine-protein phosphatase 2A activator; 1e-126
2ixo_A323 Serine/threonine-protein phosphatase 2A activator 1e-124
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>2ixm_A Serine/threonine-protein phosphatase 2A regulatory subunit B'; 2 PTPA, ppiase, hydrolase activator; 1.5A {Homo sapiens} SCOP: a.268.1.1 PDB: 2hv6_A 2hv7_A* 2g62_A Length = 303 Back     alignment and structure
 Score =  379 bits (975), Expect = e-133
 Identities = 153/287 (53%), Positives = 206/287 (71%), Gaps = 1/287 (0%)

Query: 25  HVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQM 84
             + IPK+++    DM +W+ S+AY +Y GFIL++NE V+GK +      S  +  +  +
Sbjct: 2   QNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFEYRVSEAIEKLLAL 61

Query: 85  LEHFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLK 144
           L   ++ IDETPP+DQP RFGNKA+  W  K+ E  E  +   +P    AA+PE++VYLK
Sbjct: 62  LNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLK 121

Query: 145 ESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYR 204
           ES GNSTRIDYGTGHE AF  FL CL +IG   ++D++A+V ++F RYL+++R+LQ  YR
Sbjct: 122 ESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYR 181

Query: 205 MEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQY 264
           MEPAGS GVW LDD+QF+PFIWGSSQL  +   +EP  F+ E+ V ++   YMFL CI +
Sbjct: 182 MEPAGSQGVWGLDDFQFLPFIWGSSQLIDHP-YLEPRHFVDEKAVNENHKDYMFLECILF 240

Query: 265 IMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
           I ++KTG F+EHSNQLWNISA+PSWSK+NQGL++MYK E L KFPVI
Sbjct: 241 ITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVI 287


>2ixn_A Serine/threonine-protein phosphatase 2A activator; PP2A phosphatase activator prolyl isomerase PTPA, isomerase; 2.8A {Saccharomyces cerevisiae} SCOP: a.268.1.1 Length = 310 Back     alignment and structure
>2ixo_A Serine/threonine-protein phosphatase 2A activator 1; isomerase, PP2A phosphatase activator prolyl isomerase PTPA, nuclear protein; 2.6A {Saccharomyces cerevisiae} SCOP: a.268.1.1 PDB: 2ixp_A* Length = 323 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
2ixm_A303 Serine/threonine-protein phosphatase 2A regulatory 100.0
2ixn_A310 Serine/threonine-protein phosphatase 2A activator; 100.0
2ixo_A323 Serine/threonine-protein phosphatase 2A activator 100.0
>2ixm_A Serine/threonine-protein phosphatase 2A regulatory subunit B'; 2 PTPA, ppiase, hydrolase activator; 1.5A {Homo sapiens} SCOP: a.268.1.1 PDB: 2hv6_A 2hv7_A* 2g62_A Back     alignment and structure
Probab=100.00  E-value=1.6e-134  Score=960.91  Aligned_cols=292  Identities=52%  Similarity=0.983  Sum_probs=288.1

Q ss_pred             CccccccceecCccchhhhhcCHhHHHHHHHHHHHHHhcCCCCCCCCCCCCHhHHHHHHHHHHHHHhhhhCCCCCCCCCC
Q psy16836         25 HVYAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRF  104 (319)
Q Consensus        25 ~~f~~P~K~I~~~~D~~~f~~S~Ay~~i~~fI~~l~~av~g~~~~~~~~~S~~v~~l~~iL~~l~~~i~e~PP~~~p~RF  104 (319)
                      ++|..|+|||.+++||++|++|+||++|++||+++|+||+|+++++..++|++|++|+++|++|++||+|+||+++|+||
T Consensus         2 ~~f~~P~KrI~~~~D~~~f~~S~ay~~i~~fI~~l~~sv~g~~~~~~~~~s~~v~~l~~iL~~l~~~i~e~PP~~~p~RF   81 (303)
T 2ixm_A            2 QNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFEYRVSEAIEKLLALLNTLDRWIDETPPVDQPSRF   81 (303)
T ss_dssp             --CCCCEECCCSSHHHHHHHTBHHHHHHHHHHHHHHHHTTTCCTTCCCCCCHHHHHHHHHHHHHHHHHHTSCCCCCSCSS
T ss_pred             CCcCCCeeeeCCHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHhHHHHHHHhCCccccccHHHHHHHHHhccCCCcccccCChhHHHHHHHHHHHHhhCCcCCCccchh
Q psy16836        105 GNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAV  184 (319)
Q Consensus       105 GN~AfR~W~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRIDYGTGHEL~Fl~fL~~L~klgil~~~d~~a~  184 (319)
                      ||+|||+|+++|++++++|+++++|+..+++++||++||.+||||+|||||||||||||+||||||+|+|+|+.+|..++
T Consensus        82 GN~AfR~w~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRiDYGTGHEL~Fl~fL~cL~klgil~~~d~~a~  161 (303)
T 2ixm_A           82 GNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI  161 (303)
T ss_dssp             SCTHHHHHHHHHHHHHHHHHHTTSCGGGGGGHHHHHHHHHTSSCBTTTTEECHHHHHHHHHHHHHHHHTTSSCGGGHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHhCcCCCccCccCcHHHHHHHHHHHHHHHcCCCccchhhhh
Confidence            99999999999999999999999999899999999999999999999999999999999999999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHhhccccCCCCcccccCCcccchhhhhhccccCCCCCCCCccccchhhHhhhcCCCccHHHHHH
Q psy16836        185 VNRIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQY  264 (319)
Q Consensus       185 vL~vF~~Yl~lvR~Lq~~Y~LEPAGSHGvWGLDDy~fLPfi~GsaQL~~~~~~~~P~~i~d~~iv~~~~~~yly~~~I~~  264 (319)
                      ||+||.|||++|||||+||+|||||||||||||||||||||||||||++| ++++|++|+|+++|++|+++||||+||+|
T Consensus       162 vL~vF~~Yl~l~R~Lq~tY~LEPAGSHGVWgLDDy~FLPfifGsaQL~~~-~~~~P~~i~~~~ive~~~~~ymy~~~I~f  240 (303)
T 2ixm_A          162 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDH-PYLEPRHFVDEKAVNENHKDYMFLECILF  240 (303)
T ss_dssp             HHTHHHHHHHHHHHHHHHTTCEESSCCGGGCSSSSCCHHHHHHHHHTTTC-SSCCGGGGGCHHHHHHHGGGCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccccCCCCCccccchhhhhhHHHhHHHHccC-CCCCchhhcCHHHHHHhcccCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhCccCccccchhhhcccCCCChHHHhHHHHHHHHHhhcCCCccccccccC
Q psy16836        265 IMKVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCL  317 (319)
Q Consensus       265 I~~~K~gpf~ehSp~L~dIs~v~sW~KVn~GliKMY~~EVL~KfpVvQHf~~~  317 (319)
                      |+++|+|||+||||||||||+|++|+|||+||+|||++|||+||||||||+|.
T Consensus       241 I~~vK~gpf~eHSp~L~dIS~v~~W~KV~~GmiKMY~aEVL~KfpVvQHf~FG  293 (303)
T 2ixm_A          241 ITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFG  293 (303)
T ss_dssp             HHHHCCSCHHHHCHHHHHHTTSSCHHHHHHHHHHHHHHHTTTCHHHHTTCEEC
T ss_pred             HHHcCCCcHHhhCHHHHhhhcCCChHHHHHHHHHHHHHHHhccccchhhhhhh
Confidence            99999999999999999999999999999999999999999999999999985



>2ixn_A Serine/threonine-protein phosphatase 2A activator; PP2A phosphatase activator prolyl isomerase PTPA, isomerase; 2.8A {Saccharomyces cerevisiae} SCOP: a.268.1.1 Back     alignment and structure
>2ixo_A Serine/threonine-protein phosphatase 2A activator 1; isomerase, PP2A phosphatase activator prolyl isomerase PTPA, nuclear protein; 2.6A {Saccharomyces cerevisiae} SCOP: a.268.1.1 PDB: 2ixp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 319
d2ixma1300 a.268.1.1 (A:23-322) Serine/threonine-protein phos 1e-140
d2ixoa1316 a.268.1.1 (A:2-317) Serine/threonine-protein phosp 1e-131
d2ixna1297 a.268.1.1 (A:3-299) Serine/threonine-protein phosp 1e-125
>d2ixma1 a.268.1.1 (A:23-322) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Human (Homo sapiens) [TaxId: 9606]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: PTPA-like
superfamily: PTPA-like
family: PTPA-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  395 bits (1017), Expect = e-140
 Identities = 153/285 (53%), Positives = 206/285 (72%), Gaps = 1/285 (0%)

Query: 27  YAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLE 86
           + IPK+++    DM +W+ S+AY +Y GFIL++NE V+GK +      S  +  +  +L 
Sbjct: 1   FIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFEYRVSEAIEKLLALLN 60

Query: 87  HFNKLIDETPPIDQPQRFGNKAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKES 146
             ++ IDETPP+DQP RFGNKA+  W  K+ E  E  +   +P    AA+PE++VYLKES
Sbjct: 61  TLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKES 120

Query: 147 FGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVNRIFVRYLDLVRRLQCEYRME 206
            GNSTRIDYGTGHE AF  FL CL +IG   ++D++A+V ++F RYL+++R+LQ  YRME
Sbjct: 121 VGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRME 180

Query: 207 PAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIM 266
           PAGS GVW LDD+QF+PFIWGSSQL  +   +EP  F+ E+ V ++   YMFL CI +I 
Sbjct: 181 PAGSQGVWGLDDFQFLPFIWGSSQLIDHPY-LEPRHFVDEKAVNENHKDYMFLECILFIT 239

Query: 267 KVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVI 311
           ++KTG F+EHSNQLWNISA+PSWSK+NQGL++MYK E L KFPVI
Sbjct: 240 EMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVI 284


>d2ixoa1 a.268.1.1 (A:2-317) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 Back     information, alignment and structure
>d2ixna1 a.268.1.1 (A:3-299) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 297 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
d2ixma1300 Serine/threonine-protein phosphatase 2A regulatory 100.0
d2ixna1297 Serine/threonine-protein phosphatase 2A regulatory 100.0
d2ixoa1316 Serine/threonine-protein phosphatase 2A regulatory 100.0
>d2ixma1 a.268.1.1 (A:23-322) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: PTPA-like
superfamily: PTPA-like
family: PTPA-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=8.1e-134  Score=952.27  Aligned_cols=290  Identities=53%  Similarity=0.991  Sum_probs=287.7

Q ss_pred             cccccceecCccchhhhhcCHhHHHHHHHHHHHHHhcCCCCCCCCCCCCHhHHHHHHHHHHHHHhhhhCCCCCCCCCCCc
Q psy16836         27 YAIPKRQVLKDSDMKQWENSEAYHEYQGFILSMNEAVRGKAIDTRLEPSNNVMSVFQMLEHFNKLIDETPPIDQPQRFGN  106 (319)
Q Consensus        27 f~~P~K~I~~~~D~~~f~~S~Ay~~i~~fI~~l~~av~g~~~~~~~~~S~~v~~l~~iL~~l~~~i~e~PP~~~p~RFGN  106 (319)
                      |..|+|||.+++||++|++|+||++|++||+++|++|+|++++++.++|++|++|+++|++|++||+|+||+++|+||||
T Consensus         1 f~~P~KrI~~~~D~~~f~~S~ay~~i~~fI~~l~~sv~g~~~~~~~~~S~~i~~l~~iL~~l~~~i~e~PP~~~~~RFGN   80 (300)
T d2ixma1           1 FIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFEYRVSEAIEKLLALLNTLDRWIDETPPVDQPSRFGN   80 (300)
T ss_dssp             CCCCEECCCSSHHHHHHHTBHHHHHHHHHHHHHHHHTTTCCTTCCCCCCHHHHHHHHHHHHHHHHHHTSCCCCCSCSSSC
T ss_pred             CCCCeeccCCHhHHHHHhcCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHhCCccccccHHHHHHHHHhccCCCcccccCChhHHHHHHHHHHHHhhCCcCCCccchhhH
Q psy16836        107 KAFAQWLNKIGECVETELQKALPEKFHAAIPEISVYLKESFGNSTRIDYGTGHEMAFCMFLLCLFRIGAFSMNDRVAVVN  186 (319)
Q Consensus       107 ~AfR~W~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRIDYGTGHEL~Fl~fL~~L~klgil~~~d~~a~vL  186 (319)
                      +|||+|+++|++++++|+++++|+..+++++||++||.+||||+|||||||||||||+||||||+|+|+++++|..++||
T Consensus        81 ~afR~w~~~l~~~~~~ll~~~l~~~~~~~~~EL~~Yl~~SFGn~tRiDYGTGHEL~F~~fL~~L~klgil~~~d~~~~vL  160 (300)
T d2ixma1          81 KAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVF  160 (300)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTSCGGGGGGHHHHHHHHHTSSCBTTTTEECHHHHHHHHHHHHHHHHTTSSCGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHhccCCCcccccCChHHHHHHHHHHHHHHcCCCchhhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHhhccccCCCCcccccCCcccchhhhhhccccCCCCCCCCccccchhhHhhhcCCCccHHHHHHHH
Q psy16836        187 RIFVRYLDLVRRLQCEYRMEPAGSHGVWSLDDYQFVPFIWGSSQLFGNKDEIEPNMFLLERTVLDHRDKYMFLACIQYIM  266 (319)
Q Consensus       187 ~vF~~Yl~lvR~Lq~~Y~LEPAGSHGvWGLDDy~fLPfi~GsaQL~~~~~~~~P~~i~d~~iv~~~~~~yly~~~I~~I~  266 (319)
                      +||.||+++||+||++|+|||||||||||||||||||||||||||++| +.++|++|+|+++|++|+++|||++||+||+
T Consensus       161 ~vF~~Yl~l~R~Lq~~Y~LEPAGSHGvWgLDDy~fLPfi~GsaQL~~~-~~~~P~~i~~~~iv~~~~~~ymy~~~I~fI~  239 (300)
T d2ixma1         161 KVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDH-PYLEPRHFVDEKAVNENHKDYMFLECILFIT  239 (300)
T ss_dssp             THHHHHHHHHHHHHHHTTCEESSCCGGGCSSSSCCHHHHHHHHHTTTC-SSCCGGGGGCHHHHHHHGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCCCcccccccchhhhhhHhhcCC-CCCCcccccCHHHHHHHHhcchHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhCccCccccchhhhcccCCCChHHHhHHHHHHHHHhhcCCCccccccccC
Q psy16836        267 KVKTGHFSEHSNQLWNISALPSWSKINQGLLKMYKGEVLAKFPVISTRPCL  317 (319)
Q Consensus       267 ~~K~gpf~ehSp~L~dIs~v~sW~KVn~GliKMY~~EVL~KfpVvQHf~~~  317 (319)
                      ++|+|||+||||||||||+|++|+|||+||+|||++|||+||||||||+|-
T Consensus       240 ~vK~Gpf~eHSp~L~dIS~v~~W~KV~~GliKMY~~EVL~KfpVvQHf~FG  290 (300)
T d2ixma1         240 EMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFG  290 (300)
T ss_dssp             HHCCSCHHHHCHHHHHHTTSSCHHHHHHHHHHHHHHHTTTCHHHHTTCEEC
T ss_pred             HhCCCchhhcCHHHHHHhcCCCchHHHHHHHHHHHHHHhhccchhhhhHhh
Confidence            999999999999999999999999999999999999999999999999984



>d2ixna1 a.268.1.1 (A:3-299) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ixoa1 a.268.1.1 (A:2-317) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure