Psyllid ID: psy16893

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
Protein Sequence
MASGKTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQGPH
Secondary Structure (PSIPRED)
cccccEEEEcccccccccccccccccEEEEEEcccccccccEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEccccccccccEEEEEccccccccHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEccccccccEEEEEEEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEccccccccEEEEEEEcccccccHHHcccccccc
Coil and Loop (DISEMBL)
masgktfsrpsdeigtmmhdEVGLLSICSSvkavtdprdgrRVALKKLPNVFQSLVSSKRVFRELKMLCFfkhdnvsitqhtpyttrrmypgltlrlGEVHVRrwtkdqgph
Flexible Loop (DISEMBL)
masgktfsrpsdeiGTMMHDEVGLLSICSSVKAVTDPRDGRrvalkklpnvfqslvssKRVFRELKMLCffkhdnvsitqhtpyttrrmypgltlrlgevhvrrwtkdqgph
Low Complexity Region (SEG)
MASGKTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQGPH
Disordered region (IsUnstruct)
******************HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRW*******
Disordered Region (DISOPRED)
****KTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVR*********
Disordered Region (DISEMBL)
*********PSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQGPH
Disordered Region (DISPRO)
********RPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHV*RWTK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASGKTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQGPH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	112	2.2.26 [Sep-21-2011]
E2QWQ2	527	Serine/threonine-protein	yes	N/A	0.410	0.087	0.869	1e-17
D3ZSZ3	527	Serine/threonine-protein	yes	N/A	0.410	0.087	0.869	1e-17
O54949	527	Serine/threonine-protein	yes	N/A	0.410	0.087	0.869	1e-17
Q9UBE8	527	Serine/threonine-protein	yes	N/A	0.410	0.087	0.869	1e-17
E1BMN8	534	Serine/threonine-protein	yes	N/A	0.410	0.086	0.869	1e-17
Q8QGV6	447	Serine/threonine-protein	N/A	N/A	0.410	0.102	0.869	2e-17
B1H3E1	454	Serine/threonine-protein	no	N/A	0.410	0.101	0.869	2e-17
Q9U9Y8	634	Serine/threonine kinase N	no	N/A	0.410	0.072	0.739	1e-13
A8XSC1	657	Serine/threonine kinase N	N/A	N/A	0.410	0.070	0.739	2e-13
P70618	360	Mitogen-activated protein	no	N/A	0.419	0.130	0.510	1e-06

>sp|E2QWQ2|NLK_CANFA Serine/threonine-protein kinase NLK OS=Canis familiaris GN=NLK PE=3 SV=1

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.
Canis familiaris (taxid: 9615)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 4

>sp|D3ZSZ3|NLK_RAT Serine/threonine-protein kinase NLK OS=Rattus norvegicus GN=Nlk PE=3 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|O54949|NLK_MOUSE Serine/threonine-protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q9UBE8|NLK_HUMAN Serine/threonine-protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|E1BMN8|NLK_BOVIN Serine/threonine-protein kinase NLK OS=Bos taurus GN=NLK PE=3 SV=2

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 159 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 204

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q8QGV6|NLK2_XENLA Serine/threonine-protein kinase NLK2 OS=Xenopus laevis GN=nlk.2 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 74  VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 119

Negatively regulates Wnt/beta-catenin-signaling during development. Plays a role together with sox11 in neural induction during early embryogenesis. Involved in TGFbeta-mediated mesoderm induction in early embryos, acting downstream of map3k7/tak1 to phosphorylate stat3.1. Augments the rnf138/narf-directed ubiquitination and degradation of tcf/lef by enhancing the association of rnf138/narf and tcf/lef. Phosphorylates mef2a to play a role in anterior neural development, including eye formation.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|B1H3E1|NLK2_XENTR Serine/threonine-protein kinase NLK2 OS=Xenopus tropicalis GN=nlk.2 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 81  VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 126

Negatively regulates Wnt/beta-catenin-signaling during development. Plays a role together with sox11 in neural induction during early embryogenesis. Involved in TGFbeta-mediated mesoderm induction in early embryos, acting downstream of map3k7/tak1 to phosphorylate stat3. Augments the rnf138/narf-directed ubiquitination and degradation of tcf/lef by enhancing the association of rnf138/narf and tcf/lef. Phosphorylates mef2a to play a role in anterior neural development, including eye formation.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q9U9Y8|NLK_CAEEL Serine/threonine kinase NLK OS=Caenorhabditis elegans GN=lit-1 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/46 (73%), Positives = 40/46 (86%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPR G+RVALKK+PNVFQ+L S KRVFRE+KML  F+HDNV
Sbjct: 254 VWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV 299

Has a role in the Wnt signaling pathway controlling the asymmetry of cell divisions during embryogenesis. Operates in the AB and EMS cell lineages influencing cell specification. Required for body wall muscle development, endoderm development, pop-1 asymmetry and T-cell division asymmetry. Lit-1/wrm-1 complex regulates pop-1 localization and is required for pop-1/par-5 interaction.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|A8XSC1|NLK_CAEBR Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/46 (73%), Positives = 40/46 (86%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +VTDPR G+RVALKK+PNVFQ+L S KRVFRE+KML  F+HDNV
Sbjct: 222 VWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV 267

Has a role in the Wnt signaling pathway controlling the asymmetry of cell divisions during embryogenesis. Operates in the AB and EMS cell lineages influencing cell specification. Required for body wall muscle development, endoderm development, pop-1 asymmetry and T-cell division asymmetry. Lit-1/wrm-1 complex regulates pop-1 localization and is required for pop-1/par-5 interaction.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P70618|MK14_RAT Mitogen-activated protein kinase 14 OS=Rattus norvegicus GN=Mapk14 PE=2 SV=3

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)

Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. MAPK14 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. Some of the targets are downstream kinases which are activated through phosphorylation and further phosphorylate additionnal targets. RPS6KA5/MSK1 and RPS6KA4/MSK2 can directly phosphorylate and activate transcription factors such as CREB1, ATF1, the NF-kappa-B isoform RELA/NFKB3, STAT1 and STAT3, but can also phosphorylate histone H3 and the nucleosomal protein HMGN1. RPS6KA5/MSK1 and RPS6KA4/MSK2 play important roles in the rapid induction of immediate-early genes in response to stress or mitogenic stimuli, either by inducing chromatin remodeling or by recruiting the transcription machinery. On the other hand, two other kinase targets, MAPKAPK2/MK2 and MAPKAPK3/MK3, participate in the control of gene expression mostly at the post-transcriptional level, by phosphorylating ZFP36 (tristetraprolin) and ELAVL1, and by regulating EEF2K, which is important for the elongation of mRNA during translation. MKNK1/MNK1 and MKNK2/MNK2, two other kinases activated by p38 MAPKs, regulate protein synthesis by phosphorylating the initiation factor EIF4E2. MAPK14 interacts also with casein kinase II, leading to its activation through autophosphorylation and further phosphorylation of TP53/p53. In the cytoplasm, the p38 MAPK pathway is an important regulator of protein turnover. For example, CFLAR is an inhibitor of TNF-induced apoptosis whose proteasome-mediated degradation is regulated by p38 MAPK phosphorylation. In a similar way, MAPK14 phosphorylates the ubiquitin ligase SIAH2, regulating its activity towards EGLN3. MAPK14 may also inhibit the lysosomal degradation pathway of autophagy by interfering with the intracellular trafficking of the transmembrane protein ATG9. Another function of MAPK14 is to regulate the endocytosis of membrane receptors by different mechanisms that impinge on the small GTPase RAB5A. In addition, clathrin-mediated EGFR internalization induced by inflammatory cytokines and UV irradiation depends on MAPK14-mediated phosphorylation of EGFR itself as well as of RAB5A effectors. Ectodomain shedding of transmembrane proteins is regulated by p38 MAPKs as well. In response to inflammatory stimuli, p38 MAPKs phosphorylate the membrane-associated metalloprotease ADAM17. Such phosphorylation is required for ADAM17-mediated ectodomain shedding of TGF-alpha family ligands, which results in the activation of EGFR signaling and cell proliferation. Another p38 MAPK substrate is FGFR1. FGFR1 can be translocated from the extracellular space into the cytosol and nucleus of target cells, and regulates processes such as rRNA synthesis and cell growth. FGFR1 translocation requires p38 MAPK activation. In the nucleus, many transcription factors are phosphorylated and activated by p38 MAPKs in response to different stimuli. Classical examples include ATF1, ATF2, ATF6, ELK1, PTPRH, DDIT3, TP53/p53 and MEF2C and MEF2A. The p38 MAPKs are emerging as important modulators of gene expression by regulating chromatin modifiers and remodelers. The promoters of several genes involved in the inflammatory response, such as IL6, IL8 and IL12B, display a p38 MAPK-dependent enrichment of histone H3 phosphorylation on 'Ser-10' (H3S10ph) in LPS-stimulated myeloid cells. This phosphorylation enhances the accessibility of the cryptic NF-kappa-B-binding sites marking promoters for increased NF-kappa-B recruitment. Phosphorylates CDC25B and CDC25C which is required for binding to 14-3-3 proteins and leads to initiation of a G2 delay after ultraviolet radiation. Phosphorylates TIAR following DNA damage, releasing TIAR from GADD45A mRNA and preventing mRNA degradation. The p38 MAPKs may also have kinase-independent roles, which are thought to be due to the binding to targets in the absence of phosphorylation. Protein O-Glc-N-acylation catalyzed by the OGT is regulated by MAPK14, and, although OGT does not seem to be phosphorylated by MAPK14, their interaction increases upon MAPK14 activation induced by glucose deprivation. This interaction may regulate OGT activity by recruiting it to specific targets such as neurofilament H, stimulating its O-Glc-N-acylation. Required in mid-fetal development for the growth of embryo-derived blood vessels in the labyrinth layer of the placenta. Also plays an essential role in developmental and stress-induced erythropoiesis, through regulation of EPO gene expression.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	112
170061465	185	conserved hypothetical protein [Culex qu	0.464	0.281	0.905	1e-18
307212788	98	Serine/threonine kinase NLK [Harpegnatho	0.687	0.785	0.640	4e-18
322786880	311	hypothetical protein SINV_15007 [Solenop	0.544	0.196	0.725	4e-18
157107527	417	serine/threonine kinase NLK [Aedes aegyp	0.401	0.107	0.977	7e-18
194751109	513	GF23805 [Drosophila ananassae] gi|190625	0.410	0.089	0.956	2e-17
345483126	413	PREDICTED: serine/threonine-protein kina	0.410	0.111	0.956	2e-17
195016958	546	GH14986 [Drosophila grimshawi] gi|193897	0.410	0.084	0.956	2e-17
158294958	442	AGAP005898-PA [Anopheles gambiae str. PE	0.410	0.104	0.956	2e-17
195126687	556	GI13148 [Drosophila mojavensis] gi|19391	0.410	0.082	0.956	2e-17
195379084	519	GJ13897 [Drosophila virilis] gi|19415546	0.410	0.088	0.956	2e-17

>gi|170061465|ref|XP_001866244.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167879671|gb|EDS43054.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/53 (90%), Positives = 51/53 (96%), Gaps = 1/53 (1%)

Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQH 81
           SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+N++ I QH
Sbjct: 125 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENMNQIYQH 177

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212788|gb|EFN88459.1| Serine/threonine kinase NLK [Harpegnathos saltator]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/89 (64%), Positives = 60/89 (67%), Gaps = 12/89 (13%)

Query: 33  AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV----SITQ--HTPYTT 86
           AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV     I Q  H  +  
Sbjct: 1   AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVLSALDILQPPHLDF-F 59

Query: 87  RRMYPGLT-----LRLGEVHVRRWTKDQG 110
           + MYP L      LR GE +  R     G
Sbjct: 60  QEMYPFLNTRTRPLRRGETNFSRLKSRAG 88

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786880|gb|EFZ13144.1| hypothetical protein SINV_15007 [Solenopsis invicta]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 52/62 (83%), Gaps = 1/62 (1%)

Query: 15  GTMMHDEVGLLSICSSV-KAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH 73
            + M + +    + S++ +AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH
Sbjct: 124 SSQMKEYICKFVVLSAISRAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH 183

Query: 74  DN 75
           DN
Sbjct: 184 DN 185

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107527|ref|XP_001649822.1| serine/threonine kinase NLK [Aedes aegypti] gi|108879565|gb|EAT43790.1| AAEL004797-PA [Aedes aegypti]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/45 (97%), Positives = 45/45 (100%)

Query: 32 KAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV
Sbjct: 8  RAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 52

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194751109|ref|XP_001957869.1| GF23805 [Drosophila ananassae] gi|190625151|gb|EDV40675.1| GF23805 [Drosophila ananassae]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct: 137 VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 182

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483126|ref|XP_003424747.1| PREDICTED: serine/threonine-protein kinase NLK-like [Nasonia vitripennis]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V AVTDPRDG+RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV
Sbjct: 54 VWAVTDPRDGKRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 99

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195016958|ref|XP_001984509.1| GH14986 [Drosophila grimshawi] gi|193897991|gb|EDV96857.1| GH14986 [Drosophila grimshawi]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct: 170 VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 215

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158294958|ref|XP_315928.3| AGAP005898-PA [Anopheles gambiae str. PEST] gi|157015807|gb|EAA11880.4| AGAP005898-PA [Anopheles gambiae str. PEST]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct: 66  VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195126687|ref|XP_002007802.1| GI13148 [Drosophila mojavensis] gi|193919411|gb|EDW18278.1| GI13148 [Drosophila mojavensis]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct: 180 VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 225

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379084|ref|XP_002048311.1| GJ13897 [Drosophila virilis] gi|194155469|gb|EDW70653.1| GJ13897 [Drosophila virilis]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct: 143 VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 188

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	112
FB|FBgn0011817	477	nmo "nemo" [Drosophila melanog	0.410	0.096	0.956	1.2e-17
UNIPROTKB|I3LBZ4	221	NLK "Uncharacterized protein"	0.535	0.271	0.701	2e-17
UNIPROTKB|Q8QGV6	447	nlk.2 "Serine/threonine-protei	0.410	0.102	0.869	2e-16
UNIPROTKB|B1H3E1	454	nlk.2 "Serine/threonine-protei	0.410	0.101	0.869	2.1e-16
UNIPROTKB|F1N862	462	NLK "Uncharacterized protein"	0.410	0.099	0.869	2.2e-16
UNIPROTKB|H0YD75	475	NLK "Serine/threonine-protein	0.410	0.096	0.869	2.3e-16
UNIPROTKB|H2XJE9	527	NLK "Serine/threonine-protein	0.410	0.087	0.869	3e-16
UNIPROTKB|E2QWQ2	527	NLK "Serine/threonine-protein	0.410	0.087	0.869	3e-16
UNIPROTKB|Q9UBE8	527	NLK "Serine/threonine-protein	0.410	0.087	0.869	3e-16
MGI|MGI:1201387	527	Nlk "nemo like kinase" [Mus mu	0.410	0.087	0.869	3e-16

FB|FBgn0011817 nmo "nemo" [Drosophila melanogaster (taxid:7227)]

 Score = 222 (83.2 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH+NV
Sbjct:    54 VWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 99

GO:0048749 "compound eye development" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0016318 "ommatidial rotation" evidence=IGI;IMP

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP

GO:0042332 "gravitaxis" evidence=IMP

GO:0001736 "establishment of planar polarity" evidence=TAS

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IGI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

UNIPROTKB|I3LBZ4 NLK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 47/67 (70%), Positives = 51/67 (76%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV----SITQ--HTPY 84
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV     I Q  H  Y
Sbjct:   152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDY 211

Query:    85 TTRRMYP 91
                 MYP
Sbjct:   212 F-EEMYP 217

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|Q8QGV6 nlk.2 "Serine/threonine-protein kinase NLK2" [Xenopus laevis (taxid:8355)]

 Score = 210 (79.0 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:    74 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 119

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0001707 "mesoderm formation" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IMP

GO:0007399 "nervous system development" evidence=IGI

GO:0008134 "transcription factor binding" evidence=IPI

GO:0009952 "anterior/posterior pattern specification" evidence=IMP

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IPI

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IMP

UNIPROTKB|B1H3E1 nlk.2 "Serine/threonine-protein kinase NLK2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 210 (79.0 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:    81 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 126

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0001707 "mesoderm formation" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0007399 "nervous system development" evidence=ISS

GO:0008134 "transcription factor binding" evidence=ISS

GO:0009952 "anterior/posterior pattern specification" evidence=ISS

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISS

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

GO:0031398 "positive regulation of protein ubiquitination" evidence=ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=ISS

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=ISS

UNIPROTKB|F1N862 NLK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 210 (79.0 bits), Expect = 2.2e-16, P = 2.2e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:    87 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 132

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

UNIPROTKB|H0YD75 NLK "Serine/threonine-protein kinase NLK" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:   100 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 145

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

UNIPROTKB|H2XJE9 NLK "Serine/threonine-protein kinase NLK" [Bos taurus (taxid:9913)]

 Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:   152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E2QWQ2 NLK "Serine/threonine-protein kinase NLK" [Canis lupus familiaris (taxid:9615)]

 Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:   152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q9UBE8 NLK "Serine/threonine-protein kinase NLK" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:   152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=ISS

GO:0004707 "MAP kinase activity" evidence=ISS

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0042169 "SH2 domain binding" evidence=ISS

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=ISS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

MGI|MGI:1201387 Nlk "nemo like kinase" [Mus musculus (taxid:10090)]

 Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query:    31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct:   152 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 197

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004707 "MAP kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0008134 "transcription factor binding" evidence=ISO

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0023014 "signal transduction by phosphorylation" evidence=IDA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IMP

GO:0031625 "ubiquitin protein ligase binding" evidence=ISO

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IDA

GO:0042169 "SH2 domain binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UBE8	NLK_HUMAN	2, ., 7, ., 1, 1, ., 2, 4	0.8695	0.4107	0.0872	yes	N/A
O54949	NLK_MOUSE	2, ., 7, ., 1, 1, ., 2, 4	0.8695	0.4107	0.0872	yes	N/A
D3ZSZ3	NLK_RAT	2, ., 7, ., 1, 1, ., 2, 4	0.8695	0.4107	0.0872	yes	N/A
E2QWQ2	NLK_CANFA	2, ., 7, ., 1, 1, ., 2, 4	0.8695	0.4107	0.0872	yes	N/A
E1BMN8	NLK_BOVIN	2, ., 7, ., 1, 1, ., 2, 4	0.8695	0.4107	0.0861	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	112
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-27
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-16
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	8e-10
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-09
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-09
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-08
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-08
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-08
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-08
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	6e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	6e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.001
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	0.002
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.002

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  102 bits (256), Expect = 3e-27
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V +VTDPRDG+RVALKK+PNVFQ+LVS KRVFRELKMLCFFKHDNV
Sbjct: 16 VWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV 61

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 70.6 bits (174), Expect = 9e-16
 Identities = 21/46 (45%), Positives = 33/46 (71%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V +  D R GR+VA+KK+ NVF  L+ +KR+ RE+K+L   +H+N+
Sbjct: 16 VCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +CS++    D R G++VA+KK+P+ F     +KR  RELK+L  FKHDN+
Sbjct: 21 VCSAI----DTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI 66

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 53.8 bits (130), Expect = 8e-10
 Identities = 21/47 (44%), Positives = 31/47 (65%)

Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V +  D + GR+VA+KKL   FQS + +KR +REL++L    H+NV
Sbjct: 30 QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV 76

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 51.6 bits (124), Expect = 5e-09
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +CS+  + T      +VA+KK+ N F + + +KR  RE+K+L    H+NV
Sbjct: 21 VCSAKNSET----NEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENV 66

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 51.2 bits (122), Expect = 8e-09
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)

Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+C++     D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 32 SVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 78

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS 77
          S+CS++    D R G +VA+KKL   FQS + +KR +REL +L   +H+NV 
Sbjct: 30 SVCSAI----DKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI 77

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 49.3 bits (117), Expect = 4e-08
 Identities = 22/47 (46%), Positives = 33/47 (70%)

Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV +  D R  ++VA+KKL   FQSL+ ++R +REL++L   KH+NV
Sbjct: 30 SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV 76

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
          +CS+  A T       VA+KK+ NVF   + +KR  RELK+L  F+ H N+
Sbjct: 16 VCSARNAETSE--EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNI 64

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 48.8 bits (116), Expect = 5e-08
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)

Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          ++CS++    D R G +VA+KKL   FQS + +KR +REL++L   KH+NV
Sbjct: 30 TVCSAL----DRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV 76

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +C++   VT    G+ VA+KKL   FQ++  +KR +REL ++    H N+
Sbjct: 32 VCAAYDTVT----GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI 77

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 42.9 bits (101), Expect = 6e-06
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +CS+   +T    G+ VA+KK+   F + V +KR +RELK+L   +H+N+
Sbjct: 26 VCSARDQLT----GQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENI 71

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    D + G+ VA+K +          +R+ RE+K+L   KH N+
Sbjct: 13 GKVYLARDKKTGKLVAIKVIKKKKIK-KDRERILREIKILKKLKHPNI 59

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 16/51 (31%), Positives = 31/51 (60%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH 81
          V +  D   G +VA+KK+ +VF+ +  + R+ RE+K+L   +H ++   +H
Sbjct: 16 VCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKH 66

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 22/48 (45%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    D   G  VA+KK+   F+S    K   RE+K+L    H N+
Sbjct: 13 GVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +C++  AV D    R VA+KKL   FQ+   +KR +REL ++    H N+
Sbjct: 33 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 27 ICSSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +CS+    T    G +VA+KK+ P  F+     +R  RE+K+L  FKH+N+
Sbjct: 21 VCSATHKPT----GVKVAIKKISP--FEHQTFCQRTLREIKILRRFKHENI 65

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          +C++  A+ +    R VA+KKL   FQ+   +KR +REL ++    H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 35.6 bits (83), Expect = 0.002
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V      R G+ VA+K +    +S    +++  E+++L   KH N+
Sbjct: 15 EVYKARHKRTGKEVAIKVIK--LESKEKKEKIINEIQILKKCKHPNI 59

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	112
KOG0595|consensus	429		99.87
KOG0615|consensus	475		99.81
KOG0575|consensus	592		99.76
KOG0197|consensus	468		99.74
KOG0593|consensus	396		99.71
KOG0194|consensus	474		99.71
KOG0611|consensus	668		99.7
KOG0600|consensus	560		99.7
KOG0659|consensus	318		99.69
KOG0591|consensus	375		99.69
KOG0032|consensus	382		99.69
KOG0597|consensus	808		99.69
KOG0583|consensus	370		99.66
KOG0588|consensus	786		99.66
KOG0586|consensus	596		99.65
KOG1187|consensus	361		99.65
KOG0582|consensus	516		99.64
KOG0192|consensus	362		99.64
KOG0589|consensus	426		99.64
KOG0598|consensus	357		99.64
KOG0581|consensus	364		99.63
KOG0605|consensus	550		99.63
KOG0196|consensus	996		99.62
KOG1026|consensus	774		99.62
KOG0661|consensus	538		99.62
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.62
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.61
KOG0580|consensus	281		99.61
KOG0660|consensus	359		99.61
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.6
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.6
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.6
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.59
KOG4279|consensus	1226		99.58
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.58
KOG1094|consensus	807		99.58
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.58
KOG0663|consensus	419		99.57
KOG0198|consensus	313		99.57
KOG0585|consensus	576		99.57
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.57
KOG4236|consensus	888		99.56
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.56
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.56
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.56
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.56
KOG4278|consensus	1157		99.56
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.55
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.55
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.55
KOG0574|consensus	502		99.55
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.55
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.55
KOG0616|consensus	355		99.55
KOG4250|consensus	732		99.54
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.54
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.54
KOG0610|consensus	459		99.54
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.54
KOG4717|consensus	864		99.54
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.54
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.54
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.54
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.54
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.54
KOG1095|consensus	1025		99.54
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.54
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.54
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.53
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.53
KOG0607|consensus	463		99.53
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.53
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.53
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.53
KOG0662|consensus	292		99.52
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.52
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.52
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.52
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.52
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.51
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.51
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.51
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.51
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.51
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.5
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.5
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.5
KOG0033|consensus	355		99.5
PTZ00267	478	NIMA-related protein kinase; Provisional	99.49
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.49
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.49
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.49
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.49
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.49
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.49
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.49
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.48
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.48
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.48
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.48
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.48
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.48
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.47
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.47
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.47
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.47
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.47
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.47
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.47
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.46
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.46
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.46
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.46
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.46
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.46
KOG1989|consensus	738		99.46
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.46
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.46
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.46
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.45
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.45
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.45
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.45
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.45
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.45
KOG0201|consensus	467		99.45
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.45
KOG0577|consensus	948		99.45
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.45
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.45
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.45
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.44
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.44
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.44
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.44
KOG0592|consensus	604		99.44
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.44
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.44
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.44
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.44
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.43
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.43
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.43
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.43
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.43
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.43
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.43
PTZ00283	496	serine/threonine protein kinase; Provisional	99.43
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.43
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.43
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.43
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.43
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.43
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.43
KOG0694|consensus	694		99.43
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.42
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.42
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.42
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.42
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.42
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.42
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.42
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.42
PHA02988	283	hypothetical protein; Provisional	99.42
KOG0193|consensus	678		99.42
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.41
KOG0578|consensus	550		99.41
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.41
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.41
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.41
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.41
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.41
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.41
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.41
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.4
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.4
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.4
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.4
KOG0594|consensus	323		99.4
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.4
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.4
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.4
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.4
KOG4721|consensus	904		99.4
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.4
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.4
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.4
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.4
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.4
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.4
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.39
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.39
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.39
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.39
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.39
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.39
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.39
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.39
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.39
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.39
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.39
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.38
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.38
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.38
KOG0199|consensus	1039		99.38
PLN00009	294	cyclin-dependent kinase A; Provisional	99.38
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.38
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.38
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.38
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.38
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.38
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.38
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.37
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.37
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.37
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.37
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.37
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.37
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.37
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.36
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.36
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.36
PHA03212	391	serine/threonine kinase US3; Provisional	99.36
KOG0667|consensus	586		99.36
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.36
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.36
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.36
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.36
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.35
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.35
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.35
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.35
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.35
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.35
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.35
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.35
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.35
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.35
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.35
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.34
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.34
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.34
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.34
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.34
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.34
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.34
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.34
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.34
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.34
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.33
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.33
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.33
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.33
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.33
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.33
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.33
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.33
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.33
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.33
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.33
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.33
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.33
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.32
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.32
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.32
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.32
PRK09188	365	serine/threonine protein kinase; Provisional	99.32
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.32
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.32
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.32
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.32
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.31
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.31
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.31
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.31
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.31
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.31
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.31
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.3
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.3
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.3
KOG0584|consensus	632		99.3
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.3
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.3
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.3
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.3
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.3
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.29
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.29
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.29
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.29
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.29
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.29
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.29
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.29
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.28
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.28
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.28
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.28
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.27
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.27
KOG2052|consensus	513		99.27
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.26
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.26
KOG0576|consensus	829		99.26
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.26
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.26
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.26
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.25
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.25
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.25
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.25
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.25
KOG0690|consensus	516		99.25
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.25
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.25
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.25
KOG0587|consensus	953		99.25
KOG1025|consensus	1177		99.25
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.24
KOG0658|consensus	364		99.24
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.24
KOG4257|consensus	974		99.24
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.24
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.24
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.23
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.23
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.23
KOG0612|consensus	1317		99.23
PHA03211	461	serine/threonine kinase US3; Provisional	99.23
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.23
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.22
PHA03209	357	serine/threonine kinase US3; Provisional	99.22
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.22
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.22
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.22
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.22
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.21
PTZ00036	440	glycogen synthase kinase; Provisional	99.21
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.21
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.2
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.2
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.2
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.19
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.19
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.19
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.18
KOG0666|consensus	438		99.18
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.18
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.17
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.17
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.17
KOG0604|consensus	400		99.17
KOG0579|consensus	1187		99.16
KOG0599|consensus	411		99.16
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.16
KOG4645|consensus	1509		99.15
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.15
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.14
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.14
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.13
KOG3653|consensus	534		99.12
KOG1035|consensus	1351		99.12
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.1
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.1
PTZ00284	467	protein kinase; Provisional	99.07
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.07
KOG2345|consensus	302		99.06
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.06
KOG0608|consensus	1034		99.06
KOG1151|consensus	775		99.06
PRK10345	210	hypothetical protein; Provisional	99.05
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.04
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.04
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.04
PHA03207	392	serine/threonine kinase US3; Provisional	99.03
KOG1152|consensus	772		99.02
KOG0695|consensus	593		99.01
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.01
KOG0200|consensus	609		99.01
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.94
PHA03210	501	serine/threonine kinase US3; Provisional	98.92
PRK14879	211	serine/threonine protein kinase; Provisional	98.88
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.84
KOG1290|consensus	590		98.84
KOG0986|consensus	591		98.8
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.77
KOG0696|consensus	683		98.76
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.76
KOG0669|consensus	376		98.75
KOG0671|consensus	415		98.74
KOG0668|consensus	338		98.72
KOG0596|consensus	677		98.71
KOG0664|consensus	449		98.68
smart00090	237	RIO RIO-like kinase.	98.62
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.62
KOG0603|consensus	612		98.6
KOG1006|consensus	361		98.6
KOG1345|consensus	378		98.58
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.47
KOG1027|consensus	903		98.46
KOG1167|consensus	418		98.44
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.42
KOG1163|consensus	341		98.38
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.34
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.33
KOG0670|consensus	752		98.17
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.14
KOG0983|consensus	391		98.13
PRK12274	218	serine/threonine protein kinase; Provisional	98.09
KOG0984|consensus	282		98.09
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.03
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.96
KOG1165|consensus	449		97.92
KOG0614|consensus	732		97.92
KOG1166|consensus	974		97.91
PHA02882	294	putative serine/threonine kinase; Provisional	97.9
KOG0665|consensus	369		97.88
KOG1164|consensus	322		97.86
KOG0195|consensus	448		97.63
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.6
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.36
KOG3741|consensus	655		97.33
KOG1024|consensus	563		97.29
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.13
KOG0603|consensus	612		96.96
KOG1243|consensus	690		96.93
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.87
KOG0590|consensus	601		96.34
KOG0590|consensus	601		96.32
KOG0601|consensus	524		96.27
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.63
PLN02876	822	acyl-CoA dehydrogenase	95.62
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	94.99
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.73
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.52
PF01636	239	APH: Phosphotransferase enzyme family This family	94.36
PRK10593	297	hypothetical protein; Provisional	94.1
KOG1033|consensus	516		93.32
KOG3087|consensus	229		93.25
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	93.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	92.76
KOG0601|consensus	524		92.73
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.63
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	89.63
KOG1023|consensus	484		89.01
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	88.47
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	88.1
KOG1240|consensus	1431		87.35
PRK12396	409	5-methylribose kinase; Reviewed	86.51
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	86.07
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	85.97
COG0478	304	RIO-like serine/threonine protein kinase fused to	85.7
COG0661	517	AarF Predicted unusual protein kinase [General fun	84.5
PLN02756	418	S-methyl-5-thioribose kinase	83.6
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	83.0
KOG0576|consensus	829		81.51

>KOG0595|consensus

Probab=99.87  E-value=9.8e-22  Score=127.66  Aligned_cols=95  Identities=17%  Similarity=0.101  Sum_probs=82.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||.|+|+ .||++.++.++..||+|++.+..-.....+-+..|+.+|+.++|||||.+.++...++.+|||||
T Consensus        11 ~y~~~~~iG~Gsfa-vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   11 DYELSREIGSGSFA-VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             cceehhhccCcceE-EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            45566679999999 99999999999999999997543344555678899999999999999999999999999999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      ||.||+|.++++..+.
T Consensus        90 yC~gGDLs~yi~~~~~  105 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRGR  105 (429)
T ss_pred             eCCCCCHHHHHHHcCC
Confidence            9999999999987644

>KOG0615|consensus

Probab=99.81  E-value=6.2e-20  Score=119.75  Aligned_cols=92  Identities=17%  Similarity=0.156  Sum_probs=79.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhh-----HHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVS-----SKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .|..+..+++++.||+|.+++.......     ...+++|+.+|++++|||||.+.+++...+..
T Consensus       173 ~yii~~~LGsGafg-~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  173 YYIISKTLGSGAFG-LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             eeEeeeeecCCcee-EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            55788899999999 9999999999999999999754322211     23468999999999999999999999999999


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||++||+||+++-.
T Consensus       252 YmVlE~v~GGeLfd~vv~  269 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVA  269 (475)
T ss_pred             EEEEEEecCccHHHHHHh
Confidence            999999999999999853

>KOG0575|consensus

Probab=99.76  E-value=8.7e-18  Score=113.72  Aligned_cols=95  Identities=18%  Similarity=0.165  Sum_probs=83.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccc-cCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNV-FQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|...+.||+|+|+ .+|.+.+..+|+.||+|.+++. .......+.+.+|+++++.|+|||||.+..++++.+.+|++.
T Consensus        19 ~Y~~g~~LGkGgFA-~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFA-RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             eeeeeeeeccCcce-EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            46778899999999 9999999999999999999753 234455678999999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhcCCC
Q psy16893         94 TLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~~  111 (112)
                      |+|..++|++.++ ++.|
T Consensus        98 ELC~~~sL~el~K-rrk~  114 (592)
T KOG0575|consen   98 ELCHRGSLMELLK-RRKP  114 (592)
T ss_pred             EecCCccHHHHHH-hcCC
Confidence            9999999999887 5554

>KOG0197|consensus

Probab=99.74  E-value=1.4e-17  Score=111.07  Aligned_cols=98  Identities=15%  Similarity=0.091  Sum_probs=81.4

Q ss_pred             CCccchhh---hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC
Q psy16893          9 RPSDEIGT---MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT   85 (112)
Q Consensus         9 ~~~~~~~~---~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~   85 (112)
                      .+.+++.+   .+.+.||+|.|| .|+.+..+.. ..||+|.+...   ....+.+.+|+.+|++|+|+|||.+.+++..
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG-~V~~g~~~~~-~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~  272 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFG-EVWLGKWNGS-TKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTK  272 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccc-eEEEEEEcCC-CcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence            55566644   677899999999 9999988644 35899998532   2334678899999999999999999999999


Q ss_pred             CCceEEEEeccCCcchhhhhhhcCCC
Q psy16893         86 TRRMYPGLTLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        86 ~~~~~lv~e~~~~~~l~~~~~~~~~~  111 (112)
                      .+.+|||||||+.|+|.++|+.+.|.
T Consensus       273 ~~piyIVtE~m~~GsLl~yLr~~~~~  298 (468)
T KOG0197|consen  273 QEPIYIVTEYMPKGSLLDYLRTREGG  298 (468)
T ss_pred             CCceEEEEEecccCcHHHHhhhcCCC
Confidence            88999999999999999999875543

>KOG0593|consensus

Probab=99.71  E-value=1.8e-17  Score=105.25  Aligned_cols=82  Identities=24%  Similarity=0.192  Sum_probs=70.5

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +..+|+|+|| .|++|+++.+|+.||+|..-....++.-.+-.++|+++|++++|+|+|.+.+++.....++||+|||+.
T Consensus         7 LgkvGEGSYG-vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh   85 (396)
T KOG0593|consen    7 LGKVGEGSYG-VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH   85 (396)
T ss_pred             hhccccCcce-EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence            4578999999 999999999999999999854333344456689999999999999999999999998999999999987


Q ss_pred             cch
Q psy16893         99 EVH  101 (112)
Q Consensus        99 ~~l  101 (112)
                      -.|
T Consensus        86 TvL   88 (396)
T KOG0593|consen   86 TVL   88 (396)
T ss_pred             HHH
Confidence            443

>KOG0194|consensus

Probab=99.71  E-value=1.1e-16  Score=107.53  Aligned_cols=103  Identities=15%  Similarity=0.052  Sum_probs=81.5

Q ss_pred             CCCCCccch---hhhcccccccCCcceEEEEEEcCCCC----CeEEEEEcccc-cCChhhHHHHHHHHHHHhhCCCCCeE
Q psy16893          6 TFSRPSDEI---GTMMHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNV-FQSLVSSKRVFRELKMLCFFKHDNVS   77 (112)
Q Consensus         6 ~~~~~~~~~---~~~~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~-~~~~~~~~~~~~e~~~l~~l~h~niv   77 (112)
                      |.....|+.   ...+.+.||+|+|| .||++.....+    ..||+|..... .........++.|+++|+.++|+|||
T Consensus       146 PI~r~~Wel~H~~v~l~kkLGeGaFG-eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV  224 (474)
T KOG0194|consen  146 PIPRQKWELSHSDIELGKKLGEGAFG-EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV  224 (474)
T ss_pred             cccccccEEeccCccccceeeccccc-EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence            445555554   22455899999999 99999754432    22899988642 23345568899999999999999999


Q ss_pred             eeeccCCCCCceEEEEeccCCcchhhhhhhcC
Q psy16893         78 ITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        78 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      .++++......+||+||+|.||+|.++|++..
T Consensus       225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~  256 (474)
T KOG0194|consen  225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNK  256 (474)
T ss_pred             EEEEEEcCCCccEEEEEecCCCcHHHHHHhCC
Confidence            99999988889999999999999999998754

>KOG0611|consensus

Probab=99.70  E-value=3.1e-17  Score=107.96  Aligned_cols=93  Identities=13%  Similarity=0.122  Sum_probs=80.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||.|.|| .|-++.....|+.||+|.|+++... ....-.+.+|+++|..++||||++++.+++..+.+.|||
T Consensus        54 RyE~~etLGkGTYG-KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   54 RYEITETLGKGTYG-KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             HHHHHHHhcCCccc-ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            44677899999999 9999998899999999999765432 233466889999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||..+|+|+|++..+
T Consensus       133 EYaS~GeLYDYiSer  147 (668)
T KOG0611|consen  133 EYASGGELYDYISER  147 (668)
T ss_pred             EecCCccHHHHHHHh
Confidence            999999999998543

>KOG0600|consensus

Probab=99.70  E-value=4.2e-17  Score=108.81  Aligned_cols=89  Identities=18%  Similarity=0.109  Sum_probs=73.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .+..++.||+|+|| .||++.+..++..||+|+++.+...........+|+.+|+++.||||+.+.+....  ...+|+|
T Consensus       118 ~feki~kIGeGTyg-~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYG-QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHhcCcchh-heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            44555789999999 99999999999999999997554445556778899999999999999998886654  4789999


Q ss_pred             EeccCCcchhhhh
Q psy16893         93 LTLRLGEVHVRRW  105 (112)
Q Consensus        93 ~e~~~~~~l~~~~  105 (112)
                      +|||+.+ |...+
T Consensus       197 FeYMdhD-L~GLl  208 (560)
T KOG0600|consen  197 FEYMDHD-LSGLL  208 (560)
T ss_pred             Eecccch-hhhhh
Confidence            9999985 44443

>KOG0659|consensus

Probab=99.69  E-value=8.7e-17  Score=100.34  Aligned_cols=90  Identities=18%  Similarity=0.076  Sum_probs=75.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |...+.+|+|+|| .||++.+..+|+.||+|+|........-....++|++.|+.++|+||+.+.+.+.....+.||+||
T Consensus         4 Y~~~~~lGEG~~g-vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    4 YEKLEKLGEGTYG-VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhcCcceE-EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            3456789999999 999999999999999999975433333345678999999999999999999998888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      ++. +|...++.
T Consensus        83 m~t-dLe~vIkd   93 (318)
T KOG0659|consen   83 MPT-DLEVVIKD   93 (318)
T ss_pred             ccc-cHHHHhcc
Confidence            997 46666654

>KOG0591|consensus

Probab=99.69  E-value=4.4e-18  Score=107.11  Aligned_cols=91  Identities=18%  Similarity=0.109  Sum_probs=77.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec-cCCCCCc-eEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH-TPYTTRR-MYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv   92 (112)
                      .+.+.+.||+|+|| .||++....++..+|.|.++-+.-+....+.+..|+.+|+.++|||||.++. .+.+++. ++|+
T Consensus        20 ~y~Il~~IG~GsFg-~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   20 DYQILKKIGRGSFG-EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHcCCcch-heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            56788899999999 9999999999999999999744444555678999999999999999998776 5555444 8999


Q ss_pred             EeccCCcchhhhhh
Q psy16893         93 LTLRLGEVHVRRWT  106 (112)
Q Consensus        93 ~e~~~~~~l~~~~~  106 (112)
                      ||+|..|+|.+.++
T Consensus        99 mE~c~~GDLsqmIk  112 (375)
T KOG0591|consen   99 MELCDAGDLSQMIK  112 (375)
T ss_pred             HHhhcccCHHHHHH
Confidence            99999999887764

>KOG0032|consensus

Probab=99.69  E-value=2e-16  Score=104.79  Aligned_cols=92  Identities=21%  Similarity=0.179  Sum_probs=80.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv   92 (112)
                      .|.+.+.||+|+|| .||.|..+.++..+|+|.+.+.... ......+.+|+.+|+++. |||+|.+.+.++....+++|
T Consensus        36 ~Y~l~~~lG~G~Fg-~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   36 KYELGRELGRGQFG-VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             cEEehhhhCCCCce-EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            56777899999999 9999999999999999999654321 223467899999999999 99999999999998999999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      ||++.||+|++++..
T Consensus       115 mEL~~GGeLfd~i~~  129 (382)
T KOG0032|consen  115 MELCEGGELFDRIVK  129 (382)
T ss_pred             EEecCCchHHHHHHH
Confidence            999999999999865

>KOG0597|consensus

Probab=99.69  E-value=5e-17  Score=110.26  Aligned_cols=91  Identities=16%  Similarity=0.082  Sum_probs=80.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||+++.+.+.+.||+|.+.+......+.+.+.+|+++++.++|||||.+.+.++...++|+|.||
T Consensus         4 yhv~e~iG~Gsfg-~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    4 YHVYEMIGEGSFG-RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             hhHHHHhcCCccc-eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            4556789999999 999999999999999999976655556678899999999999999999999999999999999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.| +|+..+..|
T Consensus        83 a~g-~L~~il~~d   94 (808)
T KOG0597|consen   83 AVG-DLFTILEQD   94 (808)
T ss_pred             hhh-hHHHHHHhc
Confidence            998 788877544

>KOG0583|consensus

Probab=99.66  E-value=6.1e-16  Score=102.30  Aligned_cols=95  Identities=18%  Similarity=0.144  Sum_probs=80.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC--Ch-hhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ--SL-VSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~--~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .|+.+.+..++..||+|.+.+...  .. ...+.+.+|+.+++.+. ||||+.+.+++.....+|
T Consensus        18 ~y~~~~~lG~Gsfg-kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~   96 (370)
T KOG0583|consen   18 KYELGRTLGSGSFG-KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY   96 (370)
T ss_pred             ceeeeeeecCCCCe-eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence            66888899999999 999999999999999997654311  11 22455668999999999 999999999999888899


Q ss_pred             EEEeccCCcchhhhhhhcCCC
Q psy16893         91 PGLTLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~~~~  111 (112)
                      +||||+.||+|++++.. .|+
T Consensus        97 ivmEy~~gGdL~~~i~~-~g~  116 (370)
T KOG0583|consen   97 IVMEYCSGGDLFDYIVN-KGR  116 (370)
T ss_pred             EEEEecCCccHHHHHHH-cCC
Confidence            99999999999999987 554

>KOG0588|consensus

Probab=99.66  E-value=2.5e-16  Score=108.07  Aligned_cols=92  Identities=16%  Similarity=0.146  Sum_probs=81.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+++.+.||.|+.| .|-.+.+..||+.+|+|.|.+..... .....+.+|+.+|+.+.|||++.+++++++..++||+.
T Consensus        13 pwkLgkTLG~Gstg-~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTG-CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             ceeccccccCCCCc-eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            56899999999999 99999999999999999997553222 22467889999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+||+.+..
T Consensus        92 Eyv~gGELFdylv~  105 (786)
T KOG0588|consen   92 EYVPGGELFDYLVR  105 (786)
T ss_pred             EecCCchhHHHHHh
Confidence            99999999999864

>KOG0586|consensus

Probab=99.65  E-value=7.4e-16  Score=104.58  Aligned_cols=93  Identities=16%  Similarity=0.140  Sum_probs=83.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +|.+...||+|.|+ .|.++.+..++..||+|.|.+...+....+.+.+|+.+|+.+.|||||.+..+......+|+|||
T Consensus        57 ~y~i~~tig~g~f~-~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e  135 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFA-KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME  135 (596)
T ss_pred             ceeeeeeeccceeE-EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence            66788899999999 99999999999999999997665555555678999999999999999999999999899999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+|++++++.+.
T Consensus       136 ya~~ge~~~yl~~~  149 (596)
T KOG0586|consen  136 YASGGELFDYLVKH  149 (596)
T ss_pred             eccCchhHHHHHhc
Confidence            99999999999653

>KOG1187|consensus

Probab=99.65  E-value=1.1e-15  Score=100.80  Aligned_cols=87  Identities=15%  Similarity=0.091  Sum_probs=72.4

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC-ceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR-RMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~   98 (112)
                      ..||+|+|| .||++.-. .+..||||.+...... . .++|.+|+.++.+++|+|+|.+.++|.+.+ +.+||+|||++
T Consensus        81 ~~ig~Ggfg-~VYkG~l~-~~~~vAVK~~~~~~~~-~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~n  156 (361)
T KOG1187|consen   81 NLIGEGGFG-TVYKGVLS-DGTVVAVKRLSSNSGQ-G-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPN  156 (361)
T ss_pred             cceecCCCe-EEEEEEEC-CCCEEEEEEecCCCCc-c-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCC
Confidence            589999999 99998754 4478999987532211 1 456999999999999999999999999877 59999999999


Q ss_pred             cchhhhhhhcCC
Q psy16893         99 EVHVRRWTKDQG  110 (112)
Q Consensus        99 ~~l~~~~~~~~~  110 (112)
                      |+|.+++....+
T Consensus       157 GsL~d~L~~~~~  168 (361)
T KOG1187|consen  157 GSLEDHLHGKKG  168 (361)
T ss_pred             CCHHHHhCCCCC
Confidence            999999976554

>KOG0582|consensus

Probab=99.64  E-value=1e-15  Score=101.18  Aligned_cols=95  Identities=9%  Similarity=0.065  Sum_probs=82.3

Q ss_pred             ccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         11 SDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        11 ~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .....|.+.++||.|.-+ .||++...+++..||+|.+..+..+. +...+++|+..|..++||||+.++..+..++.+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa-~V~~A~c~p~~e~VAIK~inLEkc~~-~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASA-VVYLARCIPTNEVVAIKIINLEKCNN-DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             CCccceeEEEEEecccee-EeeeeeecccCCEEEEEEeehhhhhh-hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence            334467888999999998 99999999999999999997554333 3678899999999999999999999888888999


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +||.||.+|++++.++.
T Consensus       101 vVmpfMa~GS~ldIik~  117 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKT  117 (516)
T ss_pred             EeehhhcCCcHHHHHHH
Confidence            99999999999998864

>KOG0192|consensus

Probab=99.64  E-value=2.4e-15  Score=99.04  Aligned_cols=88  Identities=18%  Similarity=0.046  Sum_probs=72.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCe-EEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC-ceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRR-VALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR-RMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~-va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e   94 (112)
                      .+.+.+|+|+|| .||++..+  |.. ||+|.+..........+.+.+|+.+|.+++|||||.+.+.+.... .+++|||
T Consensus        44 ~~~~~iG~G~~g-~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   44 PIEEVLGSGSFG-TVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             hhhhhcccCCce-eEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            344569999999 99998876  444 999998644333333678999999999999999999999888866 7999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus       121 y~~~GsL~~~l~~  133 (362)
T KOG0192|consen  121 YMPGGSLSVLLHK  133 (362)
T ss_pred             eCCCCcHHHHHhh
Confidence            9999999998865

>KOG0589|consensus

Probab=99.64  E-value=6.6e-16  Score=102.50  Aligned_cols=95  Identities=15%  Similarity=0.104  Sum_probs=81.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc-eEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR-MYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~   93 (112)
                      .|..++.+|.|+|| .++...++..+..+++|.|..........+....|+.+++++.|||||.+.+.+..++. ++|+|
T Consensus         5 ~Ye~~~~iG~GafG-~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFG-SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             hhhhhhhcCccccc-hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            45677899999999 88888888888899999997655555555678899999999999999999998888777 99999


Q ss_pred             eccCCcchhhhhhhcCC
Q psy16893         94 TLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~  110 (112)
                      +||+||++.+.++..+|
T Consensus        84 ~Y~eGg~l~~~i~~~k~  100 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKG  100 (426)
T ss_pred             eecCCCCHHHHHHHHhh
Confidence            99999999999876554

>KOG0598|consensus

Probab=99.64  E-value=8.7e-16  Score=99.05  Aligned_cols=92  Identities=17%  Similarity=0.074  Sum_probs=79.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.++++||.|+|| .|+......+++.+|+|++++..... .+......|..+|.+++||.||.+...+.+.+.+|||+
T Consensus        26 dF~~lkviGkG~fG-kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl  104 (357)
T KOG0598|consen   26 DFEILKVIGKGSFG-KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL  104 (357)
T ss_pred             heeeeeeeeccCCc-eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence            44788899999999 99999999999999999997543222 23456788999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.||+|+-.|..
T Consensus       105 d~~~GGeLf~hL~~  118 (357)
T KOG0598|consen  105 DYLNGGELFYHLQR  118 (357)
T ss_pred             eccCCccHHHHHHh
Confidence            99999999988863

>KOG0581|consensus

Probab=99.63  E-value=1.9e-15  Score=97.62  Aligned_cols=88  Identities=16%  Similarity=0.051  Sum_probs=75.1

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC-ceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR-RMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~   96 (112)
                      .+..||+|..| .|+++.++.+++.+|+|.|... ..+...+.+.+|++++...+||+||.+++.+.... .++++||||
T Consensus        83 ~~~~lG~G~gG-~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM  160 (364)
T KOG0581|consen   83 RLGVLGSGNGG-TVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM  160 (364)
T ss_pred             hhhhcccCCCc-EEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence            34589999999 9999999999999999999532 23444577899999999999999999999888766 599999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .+|+|-+.++.
T Consensus       161 DgGSLd~~~k~  171 (364)
T KOG0581|consen  161 DGGSLDDILKR  171 (364)
T ss_pred             CCCCHHHHHhh
Confidence            99998776653

>KOG0605|consensus

Probab=99.63  E-value=1.8e-15  Score=101.52  Aligned_cols=91  Identities=13%  Similarity=0.001  Sum_probs=77.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.++.+||+|+|| .||.|..+.+|..+|+|.+++.. ....+...++.|-.+|....++++|.++..+.+.+.+||||
T Consensus       142 DFe~Lk~IgkGAfG-eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM  220 (550)
T KOG0605|consen  142 DFELLKVIGKGAFG-EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM  220 (550)
T ss_pred             cchhheeeccccce-eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence            44677899999999 99999999999999999997532 22334566888999999989999999999999999999999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||++||+.+-.|.
T Consensus       221 EylPGGD~mTLL~  233 (550)
T KOG0605|consen  221 EYLPGGDMMTLLM  233 (550)
T ss_pred             EecCCccHHHHHH
Confidence            9999999776553

>KOG0196|consensus

Probab=99.62  E-value=8.1e-16  Score=107.29  Aligned_cols=93  Identities=13%  Similarity=0.054  Sum_probs=80.5

Q ss_pred             hcccccccCCcceEEEEEEcCCCC---CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~---~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ++.++||.|-|| .|+.+.-+..+   ..||+|.++ ......+...|+.|+.||.++.||||+.+.++......+++|.
T Consensus       632 ~Ie~VIGaGEFG-EVc~GrLk~pgkre~~VAIKTLK-~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  632 KIEKVIGAGEFG-EVCSGRLKLPGKREITVAIKTLK-AGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             EEEEEEeccccc-ceecccccCCCCcceeEEEeeec-cCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            677899999999 99999865544   469999996 3344556678999999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhcCCC
Q psy16893         94 TLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~~  111 (112)
                      |||++|.|-.+|+.+.|.
T Consensus       710 EyMENGsLDsFLR~~DGq  727 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDGQ  727 (996)
T ss_pred             hhhhCCcHHHHHhhcCCc
Confidence            999999999999887663

>KOG1026|consensus

Probab=99.62  E-value=5.2e-16  Score=108.35  Aligned_cols=91  Identities=14%  Similarity=0.042  Sum_probs=77.5

Q ss_pred             hcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      ..++.||+|+|| .||++...     ...+.||||.++. .......++|++|++++..++|||||.+.++|...+.+|+
T Consensus       489 ~~~~eLGegaFG-kVf~a~~~~l~p~~~~~lVAVK~LKd-~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M  566 (774)
T KOG1026|consen  489 VFKEELGEGAFG-KVFLAEAYGLLPGQDEQLVAVKALKD-KAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM  566 (774)
T ss_pred             eehhhhcCchhh-hhhhhhccCCCCCccceehhHhhhcc-cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence            566789999999 99998642     2346799999963 3344466889999999999999999999999999999999


Q ss_pred             EEeccCCcchhhhhhhcC
Q psy16893         92 GLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~  109 (112)
                      |+|||..|+|-++|+...
T Consensus       567 vFEYm~~GDL~eFLra~s  584 (774)
T KOG1026|consen  567 VFEYMDHGDLHEFLRARS  584 (774)
T ss_pred             EEEecccccHHHHHHhhC
Confidence            999999999999998643

>KOG0661|consensus

Probab=99.62  E-value=2.7e-16  Score=104.44  Aligned_cols=91  Identities=19%  Similarity=0.124  Sum_probs=76.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCC-ceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTR-RMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv   92 (112)
                      .|.+++.||.|+|| .||++....++..||+|.+.+.+....+.- -+||+..|++++ |||||.+.+++.+.+ .+|+|
T Consensus        11 RY~~i~klGDGTfG-sV~la~~~~~~~~VAIK~MK~Kf~s~ee~~-nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   11 RYTVIRKLGDGTFG-SVYLAKSKETGELVAIKKMKKKFYSWEECM-NLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHhcCCcce-eEEEeeecCCCceeeHHHHHhhhccHHHHH-HHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            45778899999999 999999999999999999975544433333 368999999999 999999999888855 89999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      ||||.. .|++.++.+
T Consensus        89 fE~Md~-NLYqLmK~R  103 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDR  103 (538)
T ss_pred             HHhhhh-hHHHHHhhc
Confidence            999997 589988765

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.62  E-value=4e-15  Score=98.67  Aligned_cols=91  Identities=12%  Similarity=-0.020  Sum_probs=76.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+.... ........+.+|+.++..++|+||+.+...+.+.+.+|++||
T Consensus         3 f~~~~~LG~G~~g-~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           3 FVKIKTLGIGAFG-EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             ceEEEEEeecCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            4456789999999 99999999999999999986432 122334668899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        82 ~~~gg~L~~~l~~   94 (381)
T cd05626          82 YIPGGDMMSLLIR   94 (381)
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.61  E-value=4e-15  Score=96.97  Aligned_cols=92  Identities=18%  Similarity=0.138  Sum_probs=77.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++....+++.+|+|.+.... ......+.+.+|+.++..++||||+.+.+.+...+.+|++|
T Consensus        19 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         19 DFEMGETLGTGSFG-RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             heEEEEEEEecCCe-EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            45677899999999 99999998899999999985321 11223456889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+++|.+.+..
T Consensus        98 e~~~~~~L~~~l~~  111 (329)
T PTZ00263         98 EFVVGGELFTHLRK  111 (329)
T ss_pred             cCCCCChHHHHHHH
Confidence            99999999988864

>KOG0580|consensus

Probab=99.61  E-value=6.6e-16  Score=95.20  Aligned_cols=95  Identities=15%  Similarity=0.067  Sum_probs=79.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||.|.|| .||.+..++++..||+|++.+.-. .....+.+.+|+++...++||||+.++..+.+...+||++
T Consensus        23 dfeigr~LgkgkFG-~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   23 DFEIGRPLGKGKFG-NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hccccccccCCccc-cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            33677789999999 999999999999999999864311 1122356889999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhcCC
Q psy16893         94 TLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~  110 (112)
                      ||.+.|+++..|..+++
T Consensus       102 Eya~~gel~k~L~~~~~  118 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRM  118 (281)
T ss_pred             EecCCchHHHHHHhccc
Confidence            99999999999875443

>KOG0660|consensus

Probab=99.61  E-value=1.4e-15  Score=97.97  Aligned_cols=90  Identities=24%  Similarity=0.314  Sum_probs=75.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC-----CCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY-----TTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-----~~~~~~l   91 (112)
                      ...+.||.|+|| .|+.+.+..++..||+|++.+.+.+...+++..+|+++|++++|+||+.+.+...     ..+.+|+
T Consensus        25 ~~~~~iG~GAyG-vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi  103 (359)
T KOG0660|consen   25 VLIEPIGRGAYG-VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL  103 (359)
T ss_pred             cccccccCccee-eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence            336789999999 9999999999999999999877888888999999999999999999996655443     3677999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      |+|+|+. +|.+-++++
T Consensus       104 V~elMet-DL~~iik~~  119 (359)
T KOG0660|consen  104 VFELMET-DLHQIIKSQ  119 (359)
T ss_pred             ehhHHhh-HHHHHHHcC
Confidence            9999976 466666543

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=4.6e-15  Score=98.20  Aligned_cols=91  Identities=15%  Similarity=0.009  Sum_probs=76.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+.... ........+.+|+.++..++||||+.+.+.+.+.+.+|+|||
T Consensus         3 y~~~~~lG~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           3 FHTVKVIGKGAFG-EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             ceEeEEEeecCCE-EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            3456789999999 99999999999999999985322 112234567889999999999999999988888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (377)
T cd05629          82 FLPGGDLMTMLIK   94 (377)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999988864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=3.9e-15  Score=98.03  Aligned_cols=92  Identities=16%  Similarity=0.020  Sum_probs=76.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+.... ........+.+|+.++..++|+||+.+...+...+.+|++||
T Consensus         3 y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           3 FESIKVIGRGAFG-EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             ceEEEEEEecCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            4566789999999 99999999899999999986321 112234567789999999999999999888888889999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++|+|.+.+...
T Consensus        82 ~~~~g~L~~~l~~~   95 (364)
T cd05599          82 YLPGGDMMTLLMKK   95 (364)
T ss_pred             CCCCcHHHHHHHHc
Confidence            99999999988653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.60  E-value=5.1e-15  Score=97.94  Aligned_cols=91  Identities=13%  Similarity=0.011  Sum_probs=76.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|+.++..+.|+||+.+...+...+.+|++||
T Consensus         3 y~~~~~lG~G~~g-~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           3 FVKIKTIGIGAFG-EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             ceEEEEEEeCCCe-EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            4567889999999 999999999999999999853211 11234567889999999999999999888888889999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        82 ~~~~g~L~~~i~~   94 (376)
T cd05598          82 YIPGGDMMSLLIR   94 (376)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999998864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=6.5e-15  Score=94.42  Aligned_cols=91  Identities=19%  Similarity=0.056  Sum_probs=75.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+.... ......+.+.+|+.+++.++||||+.+...+.+.+.+|++||
T Consensus         3 y~~~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           3 LERIKTVGTGTFG-RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             ceeeeeeecCCCe-EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            3456789999999 99999998899999999985321 112234567889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        82 ~~~~~~L~~~~~~   94 (291)
T cd05612          82 YVPGGELFSYLRN   94 (291)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999988764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG4279|consensus

Probab=99.58  E-value=1.7e-15  Score=105.31  Aligned_cols=89  Identities=16%  Similarity=0.142  Sum_probs=80.9

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      +||.|.|| .||.+++..+..+.|+|.|+.  ..+...+.+..|+..+++++|.|||++.+.+..++.+-++||-++||+
T Consensus       582 VLGKGTYG-~VYA~RD~~tqvrIaIKEIpe--kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYG-TVYAARDMDTQVRIAIKEIPE--KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCcee-EEEeeccccceeEEEeeeccc--ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            69999999 999999999999999999963  334556788899999999999999999998888889999999999999


Q ss_pred             hhhhhhhcCCCC
Q psy16893        101 HVRRWTKDQGPH  112 (112)
Q Consensus       101 l~~~~~~~~~~~  112 (112)
                      |.+.+++.+||.
T Consensus       659 LSsLLrskWGPl  670 (1226)
T KOG4279|consen  659 LSSLLRSKWGPL  670 (1226)
T ss_pred             HHHHHHhccCCC
Confidence            999999999994

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.58  E-value=9.3e-15  Score=96.90  Aligned_cols=91  Identities=12%  Similarity=-0.030  Sum_probs=76.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+.... ......+.+.+|+.+++.++|+||+.+...+...+.+|+|||
T Consensus         3 f~~~~~LG~G~~g-~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           3 FVKIKTLGIGAFG-EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             cEEEEEEEeCCCE-EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            3456789999999 99999999999999999986421 112334568889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        82 ~~~gg~L~~~l~~   94 (382)
T cd05625          82 YIPGGDMMSLLIR   94 (382)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG1094|consensus

Probab=99.58  E-value=3.9e-15  Score=101.47  Aligned_cols=93  Identities=14%  Similarity=0.069  Sum_probs=78.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+++.||+|.|| .|-.|... .+..||+|.++.+ ........+..|+++|.+++||||+.+.++|..++.+++++|||
T Consensus       541 ~~~ekiGeGqFG-EVhLCeve-g~lkVAVK~Lr~~-a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  541 RFKEKIGEGQFG-EVHLCEVE-GPLKVAVKILRPD-ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             ehhhhhcCcccc-eeEEEEec-CceEEEEeecCcc-cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            456789999999 99998754 3578999999643 22334578999999999999999999999999999999999999


Q ss_pred             CCcchhhhhhhcCCCC
Q psy16893         97 LGEVHVRRWTKDQGPH  112 (112)
Q Consensus        97 ~~~~l~~~~~~~~~~~  112 (112)
                      ++|.|-++|...+.|+
T Consensus       618 EnGDLnqFl~aheapt  633 (807)
T KOG1094|consen  618 ENGDLNQFLSAHELPT  633 (807)
T ss_pred             hcCcHHHHHHhccCcc
Confidence            9999999998766653

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.58  E-value=1.2e-14  Score=95.81  Aligned_cols=91  Identities=14%  Similarity=-0.011  Sum_probs=75.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+..|+.++..++|+||+.+...+.+...+|+|||
T Consensus         3 y~~~~~LG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           3 FESLKVIGRGAFG-EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             ceEeEEEEeCCCE-EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            3456789999999 999999988999999999864221 12223567889999999999999998888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (363)
T cd05628          82 FLPGGDMMTLLMK   94 (363)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0663|consensus

Probab=99.57  E-value=5.2e-15  Score=95.15  Aligned_cols=84  Identities=15%  Similarity=0.092  Sum_probs=68.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .+..+..|++|+|| .||++.+.++++.||+|+++.......-.-..++|+.+|.+++|||||.+..+...  -+.+|+|
T Consensus        77 efe~lnrI~EGtyG-iVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   77 EFEKLNRIEEGTYG-VVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHhhcccCcce-eEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            45556789999999 99999999999999999997543333333456899999999999999988875543  4569999


Q ss_pred             EeccCCc
Q psy16893         93 LTLRLGE   99 (112)
Q Consensus        93 ~e~~~~~   99 (112)
                      ||||+.+
T Consensus       156 Me~~EhD  162 (419)
T KOG0663|consen  156 MEYVEHD  162 (419)
T ss_pred             HHHHHhh
Confidence            9999975

>KOG0198|consensus

Probab=99.57  E-value=5.2e-14  Score=90.92  Aligned_cols=94  Identities=17%  Similarity=0.110  Sum_probs=77.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CC-ceEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TR-RMYP   91 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~-~~~l   91 (112)
                      ......+.||+|+|| .||.+.+.+++...|+|.+...  +....+.+.+|+.+|..++|||||++.+.... .+ .+++
T Consensus        17 ~~~~~~~~lG~Gs~G-~V~l~~~~~~g~~~AvK~v~~~--~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFG-SVYLATNKKTGELMAVKSVELE--DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             chhhhhccccCccce-EEEEEEecCCCcceeeeeeecc--cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            445777889999999 9999999888999999998543  12225678999999999999999999886444 33 6899


Q ss_pred             EEeccCCcchhhhhhhcCC
Q psy16893         92 GLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~~  110 (112)
                      +|||+++|+|.+.++..+|
T Consensus        94 ~mEy~~~GsL~~~~~~~g~  112 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGG  112 (313)
T ss_pred             eeeccCCCcHHHHHHHcCC
Confidence            9999999999999987664

>KOG0585|consensus

Probab=99.57  E-value=1.6e-14  Score=96.37  Aligned_cols=87  Identities=23%  Similarity=0.182  Sum_probs=71.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-------CChh-----hHHHHHHHHHHHhhCCCCCeEeeecc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-------QSLV-----SSKRVFRELKMLCFFKHDNVSITQHT   82 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-------~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~   82 (112)
                      .|.+.+.||+|+|| .|-++++..+++.||+|.+.+..       ....     ..+.+.+|+.+|+++.|+|+|.+.++
T Consensus        98 qy~l~~eiG~G~yG-kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   98 QYELIKEIGSGQYG-KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             heehhhhhcCCccc-eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            44677899999999 99999999999999999996421       1111     12578999999999999999999887


Q ss_pred             CCC--CCceEEEEeccCCcchh
Q psy16893         83 PYT--TRRMYPGLTLRLGEVHV  102 (112)
Q Consensus        83 ~~~--~~~~~lv~e~~~~~~l~  102 (112)
                      ..+  ++.+|+|+|||..|.+.
T Consensus       177 LDDP~s~~~YlVley~s~G~v~  198 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVK  198 (576)
T ss_pred             ecCcccCceEEEEEeccCCccc
Confidence            766  67899999999988754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.57  E-value=1.7e-14  Score=93.80  Aligned_cols=87  Identities=15%  Similarity=0.090  Sum_probs=72.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|+.+++.++||||+.+...+...+.+|++|||+++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFG-KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            368999999 999999988999999999864321 122345677899999999999999988888888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus        80 ~~L~~~l~~   88 (323)
T cd05571          80 GELFFHLSR   88 (323)
T ss_pred             CcHHHHHHH
Confidence            999888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4236|consensus

Probab=99.56  E-value=1.6e-14  Score=97.96  Aligned_cols=88  Identities=15%  Similarity=0.146  Sum_probs=74.6

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ..++||+|+|| .||.+.++++|+.||+|.|.+..........++.|+++|..+.||.||.+..+++..+.+|+|||-+.
T Consensus       568 ~devLGSGQFG-~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  568 ADEVLGSGQFG-TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             hHhhccCCcce-eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            34689999999 99999999999999999997554333344668899999999999999999999999999999999998


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      |+ .++.+.+
T Consensus       647 GD-MLEMILS  655 (888)
T KOG4236|consen  647 GD-MLEMILS  655 (888)
T ss_pred             ch-HHHHHHH
Confidence            75 5665543

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.56  E-value=2.4e-14  Score=94.96  Aligned_cols=91  Identities=15%  Similarity=0.065  Sum_probs=74.1

Q ss_pred             hhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|+|| .||++..     ..++..||+|.+.... .....+.+.+|+.++..+ +||||+.+.+.+...+..
T Consensus        37 ~~~~~~LG~G~fG-~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          37 LSFGKTLGAGAFG-KVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             eehhheecCCccc-eEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            4667899999999 9998852     3456689999985322 223346788999999999 799999999988888889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      +++|||+++|+|.++++..
T Consensus       115 ~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             eeeehhccCCcHHHHHHhc
Confidence            9999999999999998754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.56  E-value=3e-14  Score=92.70  Aligned_cols=89  Identities=11%  Similarity=0.048  Sum_probs=74.0

Q ss_pred             cccccccC--CcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         18 MHDEVGLL--SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        18 ~~~~lg~g--~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.++||+|  +|+ .||++.+..+++.||+|.+............+..|+.+++.++||||+.+.+.+...+..|+||||
T Consensus         2 ~~~~ig~G~~~~~-~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLM-TVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceE-EEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            45688999  677 899999999999999999864433333445677899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      ++++++.+.+..
T Consensus        81 ~~~~~l~~~~~~   92 (327)
T cd08227          81 MAYGSAKDLICT   92 (327)
T ss_pred             cCCCcHHHHHHh
Confidence            999999888754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.8e-14  Score=93.89  Aligned_cols=91  Identities=16%  Similarity=0.116  Sum_probs=75.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+..|+.++..++|+||+.+...+...+.+|++||
T Consensus         3 y~~~~~ig~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           3 FQILTQVGQGGYG-QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             cEEEEEEeecCCe-EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            4566789999999 999999988999999999864321 11234567889999999999999998888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        82 ~~~g~~L~~~l~~   94 (333)
T cd05600          82 YVPGGDFRTLLNN   94 (333)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999988754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.56  E-value=3.4e-14  Score=94.99  Aligned_cols=90  Identities=17%  Similarity=0.061  Sum_probs=72.8

Q ss_pred             hcccccccCCcceEEEEEEcCCC-----CCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRD-----GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~-----~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.||+|+|| .||++.+...     ...||+|.+... ......+.+.+|+.++..+. ||||+.+.+.+...+.+|
T Consensus        40 ~~~~~LG~G~fG-~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~  117 (400)
T cd05105          40 VLGRILGSGAFG-KVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY  117 (400)
T ss_pred             ehhheecCCCCc-eEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence            566789999999 9999875322     346999998532 22334567899999999996 999999999888888899


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+++|+|.+.+...
T Consensus       118 lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         118 IITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             EEEEecCCCcHHHHHHHh
Confidence            999999999999988653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG4278|consensus

Probab=99.56  E-value=5.4e-15  Score=101.88  Aligned_cols=94  Identities=14%  Similarity=0.010  Sum_probs=81.0

Q ss_pred             Cccchhh---hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC
Q psy16893         10 PSDEIGT---MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT   86 (112)
Q Consensus        10 ~~~~~~~---~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~   86 (112)
                      +.|+..+   .+...||-|+|| .||.+..++-.-.||||.+..+   .....+|+.|+.+|+.++|||+|++.++|...
T Consensus       260 DkWEmeRtdItMkhKLGGGQYG-eVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E  335 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE  335 (1157)
T ss_pred             chhhccchheeeeeccCCCccc-ceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence            4555543   566689999999 9999998888888999998632   34568899999999999999999999999998


Q ss_pred             CceEEEEeccCCcchhhhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..+|||.|||..|.|+|+|+.
T Consensus       336 pPFYIiTEfM~yGNLLdYLRe  356 (1157)
T KOG4278|consen  336 PPFYIITEFMCYGNLLDYLRE  356 (1157)
T ss_pred             CCeEEEEecccCccHHHHHHH
Confidence            889999999999999999975

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.55  E-value=3.3e-14  Score=92.47  Aligned_cols=87  Identities=16%  Similarity=0.086  Sum_probs=72.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.||+|+|| .||++.+..++..||+|.+..... .......+.+|+.+++.++|||++.+...+...+.+|+||||+++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFG-KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence            368999999 999999988999999999864321 122345667899999999999999988888888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus        80 ~~L~~~l~~   88 (323)
T cd05595          80 GELFFHLSR   88 (323)
T ss_pred             CcHHHHHHH
Confidence            999887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=3.6e-14  Score=91.82  Aligned_cols=85  Identities=16%  Similarity=0.131  Sum_probs=71.4

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||+|+|| .||++.+..++..+|+|.+.... ........+.+|+.++..++||||+.+...+...+.+|++|||+++++
T Consensus         1 lg~G~~g-~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFG-KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            6899999 99999998899999999985322 122334567889999999999999998888888888999999999999


Q ss_pred             hhhhhhh
Q psy16893        101 HVRRWTK  107 (112)
Q Consensus       101 l~~~~~~  107 (112)
                      |.+.+..
T Consensus        80 L~~~l~~   86 (312)
T cd05585          80 LFHHLQR   86 (312)
T ss_pred             HHHHHHh
Confidence            9988854

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.55  E-value=9e-14  Score=93.02  Aligned_cols=90  Identities=16%  Similarity=0.096  Sum_probs=73.3

Q ss_pred             hcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.||+|+|| .||++...     ..+..||+|.+.... .....+.+.+|+.++..+. ||||+.+.+.+...+.++
T Consensus        40 ~~~~~lG~G~fG-~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~  117 (401)
T cd05107          40 VLGRTLGSGAFG-RVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY  117 (401)
T ss_pred             ehhhhccCCCce-eEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence            466799999999 99998743     345679999996432 2233456889999999997 999999988888878899


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      +++||+.+|+|.+++...
T Consensus       118 iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         118 IITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEEeccCCCcHHHHHHhc
Confidence            999999999999988653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0574|consensus

Probab=99.55  E-value=2.1e-15  Score=96.32  Aligned_cols=99  Identities=15%  Similarity=0.194  Sum_probs=81.6

Q ss_pred             CCCCccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC
Q psy16893          7 FSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT   86 (112)
Q Consensus         7 ~~~~~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~   86 (112)
                      .+.+.++.+.. ++.||+|+|| .|+++.++.+|..+|+|+++.    ....+++..|+.++.++..+++|.+++.+...
T Consensus        27 L~K~PEEVFDi-~~KLGEGSYG-SV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~  100 (502)
T KOG0574|consen   27 LNKPPEEVFDI-VGKLGEGSYG-SVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH  100 (502)
T ss_pred             hcCChHHHHHH-HHHhcCCcch-HHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhccC
Confidence            44444544444 4689999999 999999999999999999863    23468889999999999999999988877776


Q ss_pred             CceEEEEeccCCcchhhhhhhcCCC
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~~~~  111 (112)
                      ..+|+|||||.-|++.|.++-++-|
T Consensus       101 sDLWIVMEYCGAGSiSDI~R~R~K~  125 (502)
T KOG0574|consen  101 SDLWIVMEYCGAGSISDIMRARRKP  125 (502)
T ss_pred             CceEeehhhcCCCcHHHHHHHhcCC
Confidence            6699999999999999988776544

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.55  E-value=5.7e-14  Score=88.93  Aligned_cols=93  Identities=13%  Similarity=-0.015  Sum_probs=74.2

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++...   ..+..+|+|.+.... .......+.+|+..+..++|||++.+.+.+...+..++
T Consensus         6 ~~~~~~~ig~G~fg-~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           6 SIKIERILGTGRFG-ELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             HeEEeeeecccCCC-eEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            45677889999999 99998643   345679999986432 22334568899999999999999999888878788999


Q ss_pred             EEeccCCcchhhhhhhcC
Q psy16893         92 GLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~  109 (112)
                      ||||+++++|.+++....
T Consensus        84 v~e~~~~~~L~~~l~~~~  101 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE  101 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC
Confidence            999999999988876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.55  E-value=5.3e-14  Score=91.88  Aligned_cols=91  Identities=15%  Similarity=0.019  Sum_probs=76.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... .......+.+|++++..++|+||+.+.+.+...+.++++||
T Consensus         6 ~y~~~~~lg~g~~g-~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           6 DFEKISELGAGNGG-VVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhheeccccCCCCE-EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            45677889999999 99999998889999999885332 22334568899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus        84 ~~~~~~L~~~l~~   96 (333)
T cd06650          84 HMDGGSLDQVLKK   96 (333)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999888754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0616|consensus

Probab=99.55  E-value=3.9e-14  Score=89.83  Aligned_cols=93  Identities=17%  Similarity=0.074  Sum_probs=79.7

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      ..+..+.+||.|+|| .|-..+.+.++..+|+|.+.+.. ....+.+...+|..+|+.+.||.++.+...+.+...+|+|
T Consensus        44 ~dfe~~~tlGtGSFG-rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFG-RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhheeeeccCccc-eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            455677899999999 99999999999999999996432 1123345678999999999999999999999999999999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||.+||+||.++++
T Consensus       123 meyv~GGElFS~Lrk  137 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRK  137 (355)
T ss_pred             EeccCCccHHHHHHh
Confidence            999999999999976

>KOG4250|consensus

Probab=99.54  E-value=8.5e-15  Score=101.03  Aligned_cols=89  Identities=21%  Similarity=0.171  Sum_probs=72.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------CceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~   90 (112)
                      ...+.||.|+|| .||+++++.+|+.||+|.++... ......++-+|+.+|++++|+|||.+.+.-++.      ..-.
T Consensus        16 ~~~e~LG~Ga~g-~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   16 EMDERLGKGAFG-NVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             eehhhhcCCccc-eeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            456789999999 99999999999999999986433 223456788999999999999999877655442      2347


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++||||.||+|...+.+
T Consensus        94 lvmEyC~gGsL~~~L~~  110 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNS  110 (732)
T ss_pred             EEEeecCCCcHHHHhcC
Confidence            89999999999887753

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.54  E-value=5.2e-14  Score=93.21  Aligned_cols=92  Identities=14%  Similarity=0.062  Sum_probs=76.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+..|+.+++.++||||+.+...+...+.+|+||
T Consensus        44 ~y~~~~~lG~G~fg-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05621          44 DYDVVKVIGRGAFG-EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM  122 (370)
T ss_pred             HCeEEEEEEecCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            45567789999999 999999988999999999853211 1222355778999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus       123 Ey~~gg~L~~~l~~  136 (370)
T cd05621         123 EYMPGGDLVNLMSN  136 (370)
T ss_pred             cCCCCCcHHHHHHh
Confidence            99999999988754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=3.5e-14  Score=92.63  Aligned_cols=91  Identities=13%  Similarity=0.028  Sum_probs=75.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++....+++.+|+|.+.... ......+.+..|+.++..++|+||+.+...+...+.+|+|||
T Consensus         3 y~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           3 FEILKVIGRGAFG-EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             ceEEEEEEecCCe-EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            4567889999999 99999998899999999985321 112234557789999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        82 ~~~g~~L~~~l~~   94 (331)
T cd05597          82 YYVGGDLLTLLSK   94 (331)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999988854

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0610|consensus

Probab=99.54  E-value=3.5e-14  Score=93.23  Aligned_cols=95  Identities=16%  Similarity=0.033  Sum_probs=79.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ...+++.||.|.-| .||++....++..+|+|++.+.... .....+.+.|-+||..+.||.++.+++.++.++..||+|
T Consensus        78 ~f~llk~LG~GdiG-~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIG-TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHcCCCCce-eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            33677899999999 9999999989999999999654322 223467788999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhcCC
Q psy16893         94 TLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~  110 (112)
                      |||+||+|....+.+.+
T Consensus       157 eyCpGGdL~~LrqkQp~  173 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPG  173 (459)
T ss_pred             ecCCCccHHHHHhhCCC
Confidence            99999998876655443

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.54  E-value=4.6e-14  Score=92.04  Aligned_cols=87  Identities=15%  Similarity=0.083  Sum_probs=72.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... .......+.+|+.+++.+.|||++.+...+...+.+|+||||+++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFG-KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            368999999 999999998999999999864321 223345678899999999999999988888888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus        80 g~L~~~l~~   88 (328)
T cd05593          80 GELFFHLSR   88 (328)
T ss_pred             CCHHHHHHh
Confidence            999887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=7.7e-14  Score=89.20  Aligned_cols=91  Identities=18%  Similarity=-0.037  Sum_probs=73.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..++..+|+|.+...... ......+.+|+.+++.++|+|++.+...+...+.++++||
T Consensus         2 y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           2 FRHYRVLGKGGFG-EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             ceEEEEEecCCCe-EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            3456789999999 9999998888999999998532211 1123446789999999999999999888888788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+++..
T Consensus        81 ~~~~~~L~~~~~~   93 (285)
T cd05605          81 LMNGGDLKFHIYN   93 (285)
T ss_pred             ccCCCcHHHHHHh
Confidence            9999998877643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG4717|consensus

Probab=99.54  E-value=1.4e-14  Score=98.08  Aligned_cols=92  Identities=20%  Similarity=0.188  Sum_probs=80.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|.|+ .|-.+.+--+|..||||+|.+..-+......+.+|+++|+..+|||||.++++......+|||+|
T Consensus        19 LYDLekTlG~GHFA-VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFA-VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eehhhhhhcCCcee-hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            34677899999999 99999988899999999997665444555678899999999999999999999999999999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      +-.+|.|+|++-+
T Consensus        98 LGD~GDl~DyImK  110 (864)
T KOG4717|consen   98 LGDGGDLFDYIMK  110 (864)
T ss_pred             ecCCchHHHHHHh
Confidence            9999999999843

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.54  E-value=4.1e-14  Score=92.11  Aligned_cols=92  Identities=13%  Similarity=0.055  Sum_probs=76.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..++..+|+|.+..... .....+.+..|+.++..++|+|++.+...+...+..|+|||
T Consensus         3 y~~~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           3 FDVKSLVGRGHFG-EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             ceEEEEEEeccCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            4566789999999 999999998999999999864322 12234567789999999999999998888877788999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        82 ~~~~~~L~~~l~~~   95 (330)
T cd05601          82 YQPGGDLLSLLNRY   95 (330)
T ss_pred             CCCCCCHHHHHHHh
Confidence            99999999988654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.54  E-value=4e-14  Score=91.79  Aligned_cols=87  Identities=22%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             cccccCCcceEEEEEEc---CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTD---PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~---~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.||+|+|| .||++.+   ..++..+|+|.+...............|+.++..++||||+.+...+...+.+|+||||+
T Consensus         2 ~~lg~G~~g-~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           2 KVLGQGSFG-KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             ceeeeCCCE-EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            578999999 9998765   357889999998643222223345678999999999999999988888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+++..
T Consensus        81 ~~~~L~~~l~~   91 (318)
T cd05582          81 RGGDLFTRLSK   91 (318)
T ss_pred             CCCcHHHHHHH
Confidence            99999988754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.54  E-value=4.7e-14  Score=93.37  Aligned_cols=92  Identities=12%  Similarity=0.049  Sum_probs=75.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... ........+..|+.+++.++|||++.+...+...+.+|+||
T Consensus        44 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05596          44 DFDVIKVIGRGAFG-EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVM  122 (370)
T ss_pred             HcEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEE
Confidence            45677889999999 99999999899999999985321 11122345678999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus       123 Ey~~gg~L~~~l~~  136 (370)
T cd05596         123 EYMPGGDLVNLMSN  136 (370)
T ss_pred             cCCCCCcHHHHHHh
Confidence            99999999887754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.54  E-value=1.2e-13  Score=86.64  Aligned_cols=92  Identities=11%  Similarity=0.091  Sum_probs=77.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |...+.||+|+|| .++.+....++..+++|.+............+.+|+.+++.++|+|++.+.+.+...+.++++|||
T Consensus         2 y~~~~~ig~g~~g-~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           2 YIPIRVLGKGAFG-EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             ceEeeEecccCCc-eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            3456789999999 999999888899999998864433344456788999999999999999998888888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (256)
T cd08221          81 ANGGTLYDKIVRQ   93 (256)
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.54  E-value=5.2e-14  Score=92.74  Aligned_cols=92  Identities=15%  Similarity=0.026  Sum_probs=75.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..++..+|+|.+..... .......+..|+.++..++|+|++.+...+...+.+|+|||
T Consensus         3 f~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           3 FESLKVIGRGAFG-EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             ceEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            3456789999999 999999988999999999863221 12234567889999999999999998888888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        82 ~~~gg~L~~~l~~~   95 (360)
T cd05627          82 FLPGGDMMTLLMKK   95 (360)
T ss_pred             CCCCccHHHHHHhc
Confidence            99999999988643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG1095|consensus

Probab=99.54  E-value=4.2e-14  Score=101.74  Aligned_cols=90  Identities=16%  Similarity=0.049  Sum_probs=75.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCC-----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDG-----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~-----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||.|+|| .||.+......     ..||+|.+.+. ....+...|+.|+.+|+.++|||||.+.+.+.+....+|
T Consensus       695 ~l~~~lG~G~FG-~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  695 TLLRVLGKGAFG-EVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             Eeeeeecccccc-ceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            566789999999 99999765432     34999999643 334556789999999999999999999999988888899


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ++|||++|+|..+|++-
T Consensus       773 ~leyM~gGDL~sflr~~  789 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRES  789 (1025)
T ss_pred             EehhcccCcHHHHHHhc
Confidence            99999999999999864

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.54  E-value=1.1e-13  Score=86.72  Aligned_cols=87  Identities=15%  Similarity=0.122  Sum_probs=73.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      +.||+|+|| .||++....++..+|+|.+... ........+.+|+.+++.+.|+|++.+.+.+......|++|||+.++
T Consensus         1 ~~lg~g~~g-~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFG-EVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCc-cEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            368999999 9999998888999999987532 22333466889999999999999999988888888899999999999


Q ss_pred             chhhhhhhc
Q psy16893        100 VHVRRWTKD  108 (112)
Q Consensus       100 ~l~~~~~~~  108 (112)
                      +|.+++...
T Consensus        79 ~L~~~~~~~   87 (252)
T cd05084          79 DFLTFLRTE   87 (252)
T ss_pred             cHHHHHHhC
Confidence            999888643

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.54  E-value=7.5e-14  Score=91.05  Aligned_cols=91  Identities=14%  Similarity=0.018  Sum_probs=76.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... .......+.+|+.+++.++|+|++.+.+.+...+.++++||
T Consensus         6 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           6 DFERISELGAGNGG-VVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cceEEEeecCCCCE-EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            44566789999999 99999999899999999885322 22334678899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        84 ~~~~~~L~~~l~~   96 (331)
T cd06649          84 HMDGGSLDQVLKE   96 (331)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999887754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.53  E-value=6e-14  Score=89.51  Aligned_cols=87  Identities=18%  Similarity=0.123  Sum_probs=71.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+............+.+|+.+++.++|+||+.+.+.+...+.+|++|||
T Consensus         3 y~~~~~lg~g~~~-~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           3 FEVLGVVGEGAYG-VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             ceEEEEecccCCE-EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            4566789999999 999999998999999999864322233345678899999999999999998888888889999999


Q ss_pred             cCCcchhh
Q psy16893         96 RLGEVHVR  103 (112)
Q Consensus        96 ~~~~~l~~  103 (112)
                      ++++.+..
T Consensus        82 ~~~~~l~~   89 (287)
T cd07848          82 VEKNMLEL   89 (287)
T ss_pred             CCCCHHHH
Confidence            99875443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=3.9e-14  Score=92.74  Aligned_cols=92  Identities=14%  Similarity=0.010  Sum_probs=76.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+..|+.++..++|+|++.+...+...+.+|+|||
T Consensus         3 y~~~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           3 FEVIKVIGRGAFG-EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             ceEEEEEEeCCcE-EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            4566789999999 999999998999999999864321 11334567889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        82 ~~~~~~L~~~l~~~   95 (350)
T cd05573          82 YMPGGDLMNLLIRK   95 (350)
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999888653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0607|consensus

Probab=99.53  E-value=5.2e-15  Score=94.98  Aligned_cols=88  Identities=20%  Similarity=0.201  Sum_probs=77.3

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      -.++||+|+|+ .|-.|.+..++.++|||.|.+.  ......++.+|+.++.+++ |+||+++.++++++..+|||||-|
T Consensus        82 t~e~LGeGAya-sVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm  158 (463)
T KOG0607|consen   82 TSELLGEGAYA-SVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM  158 (463)
T ss_pred             HHHHhcCccce-eeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc
Confidence            34589999999 9999999999999999998543  2344578899999999987 999999999999999999999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      .||.|+.++.++
T Consensus       159 ~GGplLshI~~~  170 (463)
T KOG0607|consen  159 RGGPLLSHIQKR  170 (463)
T ss_pred             cCchHHHHHHHh
Confidence            999999998764

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.53  E-value=8.3e-14  Score=90.89  Aligned_cols=91  Identities=13%  Similarity=0.010  Sum_probs=74.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++....+++.+|+|.+.... ........+..|..++..+.|+||+.+...+...+..|++||
T Consensus         3 y~i~~~lG~G~fg-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           3 FEIIKVIGRGAFG-EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             ceEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            4566789999999 99999998899999999985321 112223457788889999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        82 y~~gg~L~~~l~~   94 (331)
T cd05624          82 YYVGGDLLTLLSK   94 (331)
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999988865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.53  E-value=1.4e-13  Score=90.45  Aligned_cols=87  Identities=18%  Similarity=0.095  Sum_probs=72.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +...+.||+|+|| .||++.+..+++.||+|.+... ........+.+|+.+++.++|+||+.+.+.+...+.+|++|||
T Consensus        76 ~~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         76 LERVNRIGSGAGG-TVYKVIHRPTGRLYALKVIYGN-HEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HhhhhhccCCCCe-EEEEEEECCCCCEEEEEEEecC-CcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            3566789999999 9999999888999999998532 2223346688999999999999999999888888889999999


Q ss_pred             cCCcchhhh
Q psy16893         96 RLGEVHVRR  104 (112)
Q Consensus        96 ~~~~~l~~~  104 (112)
                      +.+++|.+.
T Consensus       154 ~~~~~L~~~  162 (353)
T PLN00034        154 MDGGSLEGT  162 (353)
T ss_pred             CCCCccccc
Confidence            999987543

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.53  E-value=1.1e-13  Score=88.57  Aligned_cols=89  Identities=17%  Similarity=-0.033  Sum_probs=72.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ...+.||+|+|| .||++....++..+|+|.+...... ......+.+|+.++..++|+|++.+...+...+..+++|||
T Consensus         3 ~~~~~lg~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           3 RHYRVLGKGGFG-EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             eEEEEEecCCCE-EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            456789999999 9999999889999999988533211 12234567899999999999999988888887889999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +++++|.+.+.
T Consensus        82 ~~~g~L~~~~~   92 (285)
T cd05631          82 MNGGDLKFHIY   92 (285)
T ss_pred             cCCCcHHHHHH
Confidence            99999877664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0662|consensus

Probab=99.52  E-value=2.4e-14  Score=85.72  Aligned_cols=80  Identities=15%  Similarity=0.115  Sum_probs=71.1

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .+.||+|.|| .|+++.+..+++.||+|.++.+.+........++|+.+++.++|.|||.+.+....+..+-||+|||..
T Consensus         7 mekigegtyg-tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq   85 (292)
T KOG0662|consen    7 MEKIGEGTYG-TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_pred             HHhhcCCcce-eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH
Confidence            4689999999 999999999999999999986655555566788999999999999999999999988999999999986


Q ss_pred             c
Q psy16893         99 E   99 (112)
Q Consensus        99 ~   99 (112)
                      .
T Consensus        86 d   86 (292)
T KOG0662|consen   86 D   86 (292)
T ss_pred             H
Confidence            4

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.52  E-value=8.2e-14  Score=90.62  Aligned_cols=87  Identities=16%  Similarity=0.093  Sum_probs=71.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... .......+..|+.++..+.||||+.+...+...+.+|+||||+++
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFG-KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            368999999 999999988999999999864321 122345667899999999999999988888888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus        80 ~~L~~~l~~   88 (325)
T cd05594          80 GELFFHLSR   88 (325)
T ss_pred             CcHHHHHHh
Confidence            999887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.52  E-value=7.5e-14  Score=91.11  Aligned_cols=90  Identities=16%  Similarity=0.041  Sum_probs=70.8

Q ss_pred             hhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CCc
Q psy16893         16 TMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TRR   88 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~~   88 (112)
                      +.+.+.||+|+|| .||++..     ..++..||+|.+... ........+.+|+.++..+ +||||+.+.+.+.. ...
T Consensus         9 ~~~~~~lG~G~fg-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (338)
T cd05102           9 LRLGKVLGHGAFG-KVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP   86 (338)
T ss_pred             ceeeeEeccCCcc-eEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence            4667889999999 9999863     234567999998532 2223346788999999999 79999988876655 556


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      ++++|||+++|+|.+.+..
T Consensus        87 ~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          87 LMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             eEEEEecCCCCcHHHHHHh
Confidence            8999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.52  E-value=2.1e-13  Score=85.46  Aligned_cols=91  Identities=11%  Similarity=0.026  Sum_probs=76.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|++| .+|++....++..+++|.+............+..|+.+++.++|+|++.+.+.+...+..|++|||+
T Consensus         3 ~~~~~l~~g~~~-~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           3 EILNKIGKGSFG-VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             eEeEEecCCCCe-EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            455789999999 9999998888999999998543223344567889999999999999999888888888899999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~l~~~   93 (256)
T cd08529          82 ENGDLHKLLKMQ   93 (256)
T ss_pred             CCCcHHHHHHHh
Confidence            999999888654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.52  E-value=1.7e-13  Score=99.17  Aligned_cols=95  Identities=13%  Similarity=0.028  Sum_probs=77.2

Q ss_pred             cchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCCce
Q psy16893         12 DEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTRRM   89 (112)
Q Consensus        12 ~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~   89 (112)
                      ....+.+.+.||+|+|| .||++.+..++..+|+|.+............+..|+.++..+.||||+.+.+.+.  ....+
T Consensus        11 ~l~~YeIl~kLG~GgFG-tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFG-EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             ccCCEEEEEEEecCCCe-EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            33356788899999999 9999999989999999998643333344567889999999999999998887653  35678


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      ||||||+++++|.+.+..
T Consensus        90 yIVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999887754

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.51  E-value=6.2e-14  Score=91.92  Aligned_cols=93  Identities=17%  Similarity=0.134  Sum_probs=74.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-CeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-RRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..++ ..+|+|.+.... ........+.+|+.++..++||||+.+.+.+...+.+|++
T Consensus        31 ~y~~~~~ig~G~~g-~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         31 DFNFIRTLGTGSFG-RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hcEEEEEEeecCCe-EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            45677899999999 99999765544 679999885322 1122345678899999999999999998888888889999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      |||+++|+|.+++...
T Consensus       110 ~Ey~~~g~L~~~i~~~  125 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN  125 (340)
T ss_pred             EeCCCCCcHHHHHHHc
Confidence            9999999999888643

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.51  E-value=2e-13  Score=87.92  Aligned_cols=90  Identities=12%  Similarity=0.002  Sum_probs=71.7

Q ss_pred             hhcccccccCCcceEEEEEEcCC----------------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEee
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPR----------------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSIT   79 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~----------------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~   79 (112)
                      +.+.+.||+|+|| .||++....                ++..+|+|.+.... .......+.+|+.++..++||||+.+
T Consensus         7 ~~~~~~lg~G~fg-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           7 LLFKEKLGEGQFG-EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             CeeeeEecccCCe-EEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            4567789999999 999986422                33469999885322 23334678899999999999999999


Q ss_pred             eccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         80 QHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        80 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+.+...+..+++|||+.+++|.+++..
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSS  112 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            8888877889999999999999887754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.51  E-value=9.8e-14  Score=91.92  Aligned_cols=93  Identities=15%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+.... ........+..|+.++..++||||+.+...+...+.+|++|
T Consensus        44 ~y~i~~~lG~G~fg-~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          44 DYEVVKVIGRGAFG-EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hcEEEEEEeecCCe-EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            55677899999999 99999999999999999985321 11222345678899999999999999888888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++++|.+.+...
T Consensus       123 Ey~~gg~L~~~~~~~  137 (371)
T cd05622         123 EYMPGGDLVNLMSNY  137 (371)
T ss_pred             cCCCCCcHHHHHHhc
Confidence            999999998887543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.51  E-value=2.6e-13  Score=85.22  Aligned_cols=92  Identities=16%  Similarity=0.150  Sum_probs=76.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .+|.+....+++.+++|.+............+.+|+.+++.++|+|++.+.+.+...+..++++||
T Consensus         2 y~~~~~lg~g~~g-~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           2 YVKVKKIGEGSFG-KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             ceEEEEeccCCce-EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            3456789999999 999999888899999999854322233446788999999999999999999888888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+.+...
T Consensus        81 ~~~~~l~~~~~~~   93 (256)
T cd08218          81 CEGGDLYKKINAQ   93 (256)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999998887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.51  E-value=1.2e-13  Score=90.11  Aligned_cols=87  Identities=15%  Similarity=0.029  Sum_probs=71.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ++||+|+|| .||++.+..+++.+|+|.+..... .......+..|..++..+ +||||+.+.+.+...+.+|++|||++
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           1 RVIGRGSYA-KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             CeEeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            368999999 999999998999999999964322 122345577899999888 59999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~~~~   89 (329)
T cd05588          80 GGDLMFHMQR   89 (329)
T ss_pred             CCCHHHHHHH
Confidence            9999887753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.50  E-value=2.5e-13  Score=86.94  Aligned_cols=90  Identities=17%  Similarity=0.051  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+.... .......+.+|+.+++.++|+|++.+.+.+...+..+++||
T Consensus         6 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           6 TYVKLDKLGEGTYA-TVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cceEeeEEecCCCE-EEEEEEECCCCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            35667889999999 99999998899999999985322 12223456789999999999999999888878788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ +|.+.+..
T Consensus        84 ~~~~-~l~~~l~~   95 (288)
T cd07871          84 YLDS-DLKQYLDN   95 (288)
T ss_pred             CCCc-CHHHHHHh
Confidence            9986 77777654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.50  E-value=2.1e-13  Score=85.44  Aligned_cols=92  Identities=14%  Similarity=0.057  Sum_probs=76.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|.+| .+|.+....+++.+++|.+..........+.+.+|+.+++.++|+|++.+.+.+...+..++++||+
T Consensus         3 ~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           3 EKIRVVGRGAFG-IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             eEEEEecccCce-EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            456789999999 9999998889999999998644333344567889999999999999998888777778899999999


Q ss_pred             CCcchhhhhhhcC
Q psy16893         97 LGEVHVRRWTKDQ  109 (112)
Q Consensus        97 ~~~~l~~~~~~~~  109 (112)
                      ++++|.+.+....
T Consensus        82 ~~~~L~~~~~~~~   94 (256)
T cd08220          82 PGGTLAEYIQKRC   94 (256)
T ss_pred             CCCCHHHHHHHhc
Confidence            9999988886543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.50  E-value=2.5e-13  Score=87.78  Aligned_cols=90  Identities=17%  Similarity=0.026  Sum_probs=75.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..++..+++|.+.... .......+.+|+.++..++||||+.+.+.+...+.+++++||
T Consensus         3 ~~~~~~lg~G~~g-~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           3 FEKLGELGAGNGG-VVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             ceEEeeccCCCCe-EEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3456789999999 99999998889999999885332 222345678899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+++..
T Consensus        81 ~~~~~L~~~l~~   92 (308)
T cd06615          81 MDGGSLDQVLKK   92 (308)
T ss_pred             cCCCcHHHHHHh
Confidence            999999888754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0033|consensus

Probab=99.50  E-value=1.1e-15  Score=95.10  Aligned_cols=91  Identities=15%  Similarity=0.110  Sum_probs=78.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.++||+|+|+ .|++|.+..+|+.+|+|.|+.........+.+.+|+++-..++||||+.+...+......|+|+|
T Consensus        12 ~y~l~e~igkG~FS-vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   12 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhHHHHHccCchH-HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            45677899999999 99999999999999999986433333456889999999999999999999999888888999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      ++.|++|+.-+-
T Consensus        91 ~m~G~dl~~eIV  102 (355)
T KOG0033|consen   91 LVTGGELFEDIV  102 (355)
T ss_pred             cccchHHHHHHH
Confidence            999999977654

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.49  E-value=2.2e-13  Score=92.93  Aligned_cols=88  Identities=13%  Similarity=0.014  Sum_probs=73.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCC-CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD-GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~-~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|++| .||.+....+ +..+++|.+..  ........+.+|+.++..++||||+.+.+.+...+.+|+|||
T Consensus        69 y~~~~~lg~G~~g-~vy~a~~~~~~~~~vv~K~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         69 YVLTTLVGRNPTT-AAFVATRGSDPKEKVVAKFVML--NDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             EEEEEEEEeCCCc-EEEEEEEcCCCCeEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            5777899999999 9999987766 67788887642  223334567789999999999999999998888889999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |+++++|.+.+.
T Consensus       146 ~~~gg~L~~~l~  157 (478)
T PTZ00267        146 YGSGGDLNKQIK  157 (478)
T ss_pred             CCCCCCHHHHHH
Confidence            999999987664

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.49  E-value=2.2e-13  Score=88.90  Aligned_cols=91  Identities=12%  Similarity=0.023  Sum_probs=74.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++....++..+|+|.+.... ........+..|+.++..++|+|++.+...+...+.+|+|||
T Consensus         3 y~~~~~lG~G~fg-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           3 FEILKVIGRGAFG-EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             ceEEEEEEeCCCe-EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            4566789999999 99999998889999999985321 112223457788889999999999998888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        82 y~~~g~L~~~l~~   94 (332)
T cd05623          82 YYVGGDLLTLLSK   94 (332)
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999998865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.49  E-value=1.5e-13  Score=86.46  Aligned_cols=92  Identities=16%  Similarity=0.065  Sum_probs=76.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||.|+|+ .||.+.+..++..+++|.+....... .....+.+|+.++++++|||++.+...+......|+++|
T Consensus         2 y~~~~~i~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           2 FELLRVIGKGAFG-KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             ceEEEEeccCCCc-eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4566789999999 99999988889999999986432222 345678899999999999999998888888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+++|.+++...
T Consensus        81 ~~~~~~L~~~l~~~   94 (258)
T cd05578          81 LLLGGDLRYHLSQK   94 (258)
T ss_pred             CCCCCCHHHHHHhc
Confidence            99999998888654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.49  E-value=2.1e-13  Score=90.43  Aligned_cols=91  Identities=16%  Similarity=0.043  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++....     ++..||+|.+.... .......+.+|+.+++.+ +|+||+.+.+.+...+.
T Consensus        39 ~~~~~~~LG~G~fg-~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          39 NLQFGKTLGAGAFG-KVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HceehheecCCCcc-cEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            34677899999999 999887433     34579999986332 223345688999999999 79999999988888888


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+.+|+|.+++..
T Consensus       117 ~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             eEEeHhhccCCcHHHHHHh
Confidence            9999999999999998854

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.49  E-value=3.8e-13  Score=85.84  Aligned_cols=92  Identities=14%  Similarity=0.028  Sum_probs=76.2

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ..+.+.+.||+|+|| .||++....++..+|+|.+.... .......+.+|+.++..++|+|++.+.+.+...+..++++
T Consensus         5 ~~~~~~~~ig~g~~g-~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           5 EDLETISDLGAGNGG-SVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHcCCCCCe-EEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            345677899999999 99999998889999999875321 2233467889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        83 e~~~~~~L~~~~~~   96 (284)
T cd06620          83 EFMDCGSLDRIYKK   96 (284)
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999998777654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.49  E-value=2.9e-13  Score=86.34  Aligned_cols=83  Identities=16%  Similarity=0.015  Sum_probs=68.3

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||+|+|| .||++.+..+++.+|+|.+...... ....+.+..|+.+++.++|+|++.+...+...+.+|++|||+++++
T Consensus         1 lg~G~~g-~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFG-EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCce-eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            6899999 9999999889999999998532211 1123456789999999999999998888878788999999999999


Q ss_pred             hhhhh
Q psy16893        101 HVRRW  105 (112)
Q Consensus       101 l~~~~  105 (112)
                      |.+.+
T Consensus        80 L~~~~   84 (280)
T cd05608          80 LRYHI   84 (280)
T ss_pred             HHHHH
Confidence            87665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=4.5e-13  Score=85.24  Aligned_cols=90  Identities=14%  Similarity=0.048  Sum_probs=75.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||.|+|| .||++....++..+++|.+..  ......+.+.+|+.+++.++|+|++.+.+.+......|++||
T Consensus         6 ~~~i~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           6 IWEIIGELGDGAFG-KVYKAQHKETGLFAAAKIIQI--ESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             HHHHHHHhcCCCCc-eEEEEEEcCCCcEEEEEEEee--CCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            35677789999999 999999888889999998852  223345678889999999999999999988888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        83 ~~~~~~L~~~~~~   95 (280)
T cd06611          83 FCDGGALDSIMLE   95 (280)
T ss_pred             ccCCCcHHHHHHH
Confidence            9999998887754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.49  E-value=3.8e-13  Score=84.49  Aligned_cols=90  Identities=16%  Similarity=0.090  Sum_probs=75.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|+|| .||.+.+..++..+++|.+.... .....+.+..|+.+++.++|+|++.+.+.+...+.+|+++||+
T Consensus         3 ~~~~~lg~g~~g-~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           3 NVLRVVGEGSFG-RALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             eEEEEeeccCCe-EEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            456789999999 99999998899999999885322 2233466778999999999999999888888888899999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      +++++.+++...
T Consensus        81 ~~~~l~~~~~~~   92 (255)
T cd08219          81 DGGDLMQKIKLQ   92 (255)
T ss_pred             CCCcHHHHHHhc
Confidence            999998887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.48  E-value=3.5e-13  Score=87.75  Aligned_cols=90  Identities=22%  Similarity=0.360  Sum_probs=69.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~   90 (112)
                      +.+.+.||+|+|| .||++.+..++..||+|.+............+.+|+.+++.++||||+.+.+.+..     ...+|
T Consensus         2 y~i~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           2 YKIQEVIGKGSYG-VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             eEEEEEEeecCCe-EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            3456789999999 99999999899999999986433223334567899999999999999987665432     24589


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+.+ +|.+.+..
T Consensus        81 lv~e~~~~-~L~~~l~~   96 (338)
T cd07859          81 VVFELMES-DLHQVIKA   96 (338)
T ss_pred             EEEecCCC-CHHHHHHh
Confidence            99999975 67777653

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.48  E-value=2.4e-13  Score=97.85  Aligned_cols=90  Identities=21%  Similarity=0.156  Sum_probs=76.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+++.+|+.+++.++|||++.+.+.+...+..|++||
T Consensus         4 YeIi~~LGkGgfG-~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME   82 (932)
T PRK13184          4 YDIIRLIGKGGMG-EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP   82 (932)
T ss_pred             eEEEEEEecCCCE-EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence            4566789999999 999999988999999999864322 22334678899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |++|++|.+.+.
T Consensus        83 Y~eGGSL~~lL~   94 (932)
T PRK13184         83 YIEGYTLKSLLK   94 (932)
T ss_pred             cCCCCCHHHHHH
Confidence            999999988765

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.48  E-value=3e-13  Score=87.10  Aligned_cols=91  Identities=18%  Similarity=0.074  Sum_probs=73.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+..... ........+|+.+++.++|||++.+.+.+...+..+++||
T Consensus         6 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           6 SYEKLEKLGEGSYA-TVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cceEeeeEEecCCE-EEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            35567889999999 999999988899999999863321 1223456789999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+ ++.+.+...
T Consensus        84 ~~~~-~l~~~~~~~   96 (303)
T cd07869          84 YVHT-DLCQYMDKH   96 (303)
T ss_pred             CCCc-CHHHHHHhC
Confidence            9975 577766543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.48  E-value=2e-13  Score=88.83  Aligned_cols=90  Identities=11%  Similarity=-0.047  Sum_probs=70.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHH---hhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKML---CFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.||+|+|| .||++.+..+++.||+|.+.... ......+.+.+|++++   +.++|||++.+.+.+...+..|+|
T Consensus         2 ~i~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           2 RCLAVLGRGHFG-KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             eEEEEEeecCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            356789999999 99999998899999999986432 1122335566666554   566799999998888888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|...+..
T Consensus        81 ~E~~~~~~L~~~~~~   95 (324)
T cd05589          81 MEYAAGGDLMMHIHT   95 (324)
T ss_pred             EcCCCCCcHHHHhhc
Confidence            999999998877653

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.48  E-value=6.1e-13  Score=83.49  Aligned_cols=92  Identities=21%  Similarity=0.150  Sum_probs=74.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   94 (112)
                      |.+.+.||.|++| .||.+.+..+++.+++|.+..........+.+.+|+.++++++|+|++.+...+.. ...+|++||
T Consensus         2 y~~~~~lg~g~~~-~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           2 YCFVRVVGKGSYG-EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             ceEEEEecCCCCe-EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4567889999999 99999988888999999986433333445667889999999999999988776543 556899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |++++++.++++..
T Consensus        81 ~~~~~~l~~~l~~~   94 (257)
T cd08223          81 FCEGGDLYHKLKEQ   94 (257)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.48  E-value=7.7e-13  Score=83.67  Aligned_cols=88  Identities=16%  Similarity=0.109  Sum_probs=74.2

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ..||+|+|| .||++.+..++..+++|.+...  .....+.+.+|+.+++.++|+|++.+.+.+...+..++++||++++
T Consensus        14 ~~lg~g~~g-~v~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          14 VVLGKGTYG-IVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             EEEecCCce-EEEEeEecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            378999999 9999998888889999988532  2334567889999999999999999988888888899999999999


Q ss_pred             chhhhhhhcCC
Q psy16893        100 VHVRRWTKDQG  110 (112)
Q Consensus       100 ~l~~~~~~~~~  110 (112)
                      +|.+.+....+
T Consensus        91 ~L~~~l~~~~~  101 (268)
T cd06624          91 SLSALLRSKWG  101 (268)
T ss_pred             CHHHHHHHhcc
Confidence            99988875433

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.47  E-value=3.2e-13  Score=88.52  Aligned_cols=93  Identities=15%  Similarity=0.041  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~   87 (112)
                      .+.+.+.||+|+|| .||++.+     ..+++.||+|.+.... .......+.+|+.++..+ +|+|++.+.+.+.. ..
T Consensus         8 ~~~~~~~lG~G~fg-~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           8 RLKLGKPLGRGAFG-QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             HhcccccccCCccc-eEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            45778899999999 9999873     3456789999986332 223345688899999999 58999988876544 55


Q ss_pred             ceEEEEeccCCcchhhhhhhcC
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      .++++|||+++|+|.+.+...+
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~  107 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKR  107 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcC
Confidence            6899999999999999887543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.47  E-value=3.8e-13  Score=84.37  Aligned_cols=92  Identities=13%  Similarity=0.135  Sum_probs=75.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++....++..+++|.+............+.+|+.+++.++|+|++.+.+.+......|+++||
T Consensus         2 ~~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           2 YEIIKKIGEGSFG-KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             ceEEEEecCCCcc-eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            3456789999999 999999988899999999854322223345677899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (257)
T cd08225          81 CDGGDLMKRINRQ   93 (257)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999887643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.47  E-value=3.1e-13  Score=87.88  Aligned_cols=87  Identities=17%  Similarity=0.076  Sum_probs=69.8

Q ss_pred             cccccCCcceEEEEEEcC---CCCCeEEEEEccccc--CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         20 DEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVF--QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.||+|+|| .||++...   .+++.+|+|.+....  ........+..|+.+++.++||||+.+...+...+.+|++||
T Consensus         2 ~~lg~G~~g-~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           2 KVLGKGGYG-KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             ceeeecCCe-EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            579999999 99998753   467889999985421  111223456789999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+++..
T Consensus        81 ~~~~~~L~~~~~~   93 (323)
T cd05584          81 YLSGGELFMHLER   93 (323)
T ss_pred             CCCCchHHHHHHH
Confidence            9999999988854

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.47  E-value=6.5e-13  Score=84.02  Aligned_cols=91  Identities=13%  Similarity=0.033  Sum_probs=73.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCC---CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~---~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++....++   ..+|+|.+... ........+..|+.++..++|||++.+.+.+...+..|++
T Consensus         6 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           6 IKIEKVIGAGEFG-EVCSGRLKLPGKREIPVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             eEeeeeecccCCC-ceEEEEEecCCCCceEEEEEECCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4567889999999 99998765333   36999988532 2233456788999999999999999998888788889999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      |||+++++|.+++...
T Consensus        84 ~e~~~~~~L~~~~~~~   99 (267)
T cd05066          84 TEYMENGSLDAFLRKH   99 (267)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999998888654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.47  E-value=3.8e-13  Score=87.38  Aligned_cols=87  Identities=15%  Similarity=0.048  Sum_probs=70.2

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+..... ..........|..++..+ +||||+.+.+.+...+.+|+||||++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           1 KVLGKGSFG-KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             CccccCCCe-EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence            368999999 999999988899999999864321 122334567788888766 69999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~~~L~~~l~~   89 (321)
T cd05591          80 GGDLMFQIQR   89 (321)
T ss_pred             CCcHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.47  E-value=7.7e-13  Score=83.39  Aligned_cols=90  Identities=20%  Similarity=0.124  Sum_probs=74.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|++| .||++....+++.+++|.+.... ........+.+|+.++++++|+|++.+...+...+..+++||
T Consensus         4 y~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   82 (267)
T cd08224           4 FKIEKKIGKGQFS-VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE   82 (267)
T ss_pred             eeeeeeeccCCce-EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence            4566789999999 99999998899999999885322 222335678899999999999999998888877788999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |+++++|.+.+.
T Consensus        83 ~~~~~~L~~~l~   94 (267)
T cd08224          83 LADAGDLSRMIK   94 (267)
T ss_pred             cCCCCCHHHHHH
Confidence            999999988774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.47  E-value=4.4e-13  Score=87.48  Aligned_cols=87  Identities=15%  Similarity=0.022  Sum_probs=70.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+.... ........+..|+.++..+ +||||+.+.+.+...+.+|+||||++
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           1 RVIGRGSYA-KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            368999999 99999999999999999986432 2223345577888888766 69999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+++..
T Consensus        80 ~~~L~~~~~~   89 (329)
T cd05618          80 GGDLMFHMQR   89 (329)
T ss_pred             CCCHHHHHHH
Confidence            9999877654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.46  E-value=6.7e-13  Score=83.86  Aligned_cols=90  Identities=13%  Similarity=0.021  Sum_probs=74.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++....++..+|+|.+....  ......+.+|+.++..++|+|++.+.+.+...+..|+++|
T Consensus        10 ~y~~~~~lg~g~~g-~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646          10 DYELIQRVGSGTYG-DVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             hcchhheeecCCCe-EEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            45677889999999 99999988889999999885321  1223456789999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        87 ~~~~~~L~~~~~~   99 (267)
T cd06646          87 YCGGGSLQDIYHV   99 (267)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.46  E-value=1e-12  Score=83.63  Aligned_cols=89  Identities=13%  Similarity=0.068  Sum_probs=73.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ...+.||+|+|| .||++.+..++..+|+|.+... ........+.+|+.++..+.|+|++.+.+.+...+..|++|||+
T Consensus         7 ~~~~~ig~G~~~-~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           7 TKLEKIGKGSFG-EVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhheeEeecCCe-EEEEEEECCCCcEEEEEEeccc-cchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            455679999999 9999988888899999987422 22233456788999999999999999988888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .+++|.+.+..
T Consensus        85 ~~~~l~~~i~~   95 (277)
T cd06641          85 GGGSALDLLEP   95 (277)
T ss_pred             CCCcHHHHHhc
Confidence            99999887753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.46  E-value=5.8e-13  Score=84.78  Aligned_cols=90  Identities=17%  Similarity=0.013  Sum_probs=75.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .+|++.+..++..+++|.+............+.+|+.+++.++|+|++.+.+.+......|+++||
T Consensus         2 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           2 YKILGRIGEGAHG-IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             ceEEeecccCCCc-EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            3566789999999 999999888899999999864332233456788999999999999999988888778889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      + +++|.+.+..
T Consensus        81 ~-~~~L~~~~~~   91 (286)
T cd07832          81 M-PSDLSEVLRD   91 (286)
T ss_pred             c-CCCHHHHHHh
Confidence            9 8899887754

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.46  E-value=5.2e-13  Score=88.34  Aligned_cols=88  Identities=49%  Similarity=0.658  Sum_probs=70.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC-----ceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR-----RMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l   91 (112)
                      .+.+.||+|+|| .||++.+..++..||+|.+..........+.+.+|+.+++.++|+||+.+.+.+...+     .+|+
T Consensus         3 ~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           3 EPDRPIGYGAFG-VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             cccceeeeCCCE-EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            356789999999 9999998889999999998644333344567889999999999999998877666544     7899


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      ++||+.+ .|.+.+.
T Consensus        82 v~e~~~~-~l~~~~~   95 (372)
T cd07853          82 VTELMQS-DLHKIIV   95 (372)
T ss_pred             Eeecccc-CHHHHHh
Confidence            9999985 5666554

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=9.6e-13  Score=82.87  Aligned_cols=91  Identities=14%  Similarity=0.053  Sum_probs=75.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh---hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL---VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|++| .||.+.+..++..+++|.+.......   ...+.+.+|+.++++++|||++.+.+.+...+.++++
T Consensus         4 ~~~~~~lg~g~~~-~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   82 (263)
T cd06625           4 WRRGKLLGQGAFG-RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF   82 (263)
T ss_pred             ccccceecCCCce-EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence            4567789999999 99999988889999999885332111   1235678899999999999999999888888899999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +||+++++|.+.+..
T Consensus        83 ~e~~~~~~l~~~~~~   97 (263)
T cd06625          83 MEYMPGGSVKDQLKA   97 (263)
T ss_pred             EEECCCCcHHHHHHH
Confidence            999999998887754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.46  E-value=6.5e-13  Score=84.62  Aligned_cols=84  Identities=17%  Similarity=0.008  Sum_probs=68.1

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||+|+|| .||++....+++.+|+|.+...... .........|+.++..++|||++.+...+.....+|++|||+.+++
T Consensus         1 lg~G~~g-~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFG-EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCce-EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            6899999 9999998889999999998532111 1122345569999999999999999888888888999999999999


Q ss_pred             hhhhhh
Q psy16893        101 HVRRWT  106 (112)
Q Consensus       101 l~~~~~  106 (112)
                      |.+++.
T Consensus        80 L~~~~~   85 (277)
T cd05607          80 LKYHIY   85 (277)
T ss_pred             HHHHHH
Confidence            877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG1989|consensus

Probab=99.46  E-value=3.7e-13  Score=94.36  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=71.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeec-cCC-----C-CCc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQH-TPY-----T-TRR   88 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~-~~~-----~-~~~   88 (112)
                      .+.+.|.+|+|+ .||.+.....+..+|+|++-.  .+....+.+.+|+.+|+.|+ |+|||.+.+ ...     . .-+
T Consensus        40 ~V~~vLAEGGFa-~VYla~~~~~~~~~AlKrm~~--~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   40 TVEKVLAEGGFA-QVYLAQDVKGGKKYALKRMYV--NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEccCCcE-EEEEEEecCCCceeeeeeeec--CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            567789999999 999999988878899998842  34556788999999999998 999998776 221     1 235


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      ++|+||||.||.|.|++..
T Consensus       117 vllLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             EEeehhhccCCcHHHHHHH
Confidence            7899999999999998854

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.46  E-value=7.8e-13  Score=83.47  Aligned_cols=90  Identities=12%  Similarity=0.142  Sum_probs=74.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC----hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS----LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      ...+.||+|++| .+|.+.+..++..+|+|.+......    ....+.+.+|+.+++.++|+|++.+.+.+...+..+++
T Consensus         3 ~~~~~lg~g~~~-~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           3 LKGQQLGTGAFS-SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             cccceecCcCce-EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            345679999999 9999998889999999998532211    11246788999999999999999999988888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +||+.+++|.+.+..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (268)
T cd06630          82 VEWMAGGSVSHLLSK   96 (268)
T ss_pred             EeccCCCcHHHHHHH
Confidence            999999999887753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.46  E-value=9.6e-13  Score=83.72  Aligned_cols=90  Identities=13%  Similarity=0.048  Sum_probs=75.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +...+.||+|+|| .+|.+.+..++..+|+|.+... ........+.+|+.+++++.|+|++.+.+.+...+..|++|||
T Consensus         6 y~~~~~lg~g~~~-~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           6 FTKLERIGKGSFG-EVFKGIDNRTQQVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             hhhhhhcccCCCe-EEEEEEEccCCEEEEEEEEecc-ccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3455679999999 9999998888899999988532 2233456788999999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        84 ~~~~~L~~~i~~   95 (277)
T cd06640          84 LGGGSALDLLRA   95 (277)
T ss_pred             CCCCcHHHHHhc
Confidence            999999988754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.46  E-value=1.1e-12  Score=83.93  Aligned_cols=90  Identities=13%  Similarity=0.066  Sum_probs=75.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||.|+|| .||++.+..++..+++|.+..  ......+.+.+|+.+++.++|+|++.+.+.+......|++||
T Consensus        13 ~y~i~~~lg~g~~g-~vy~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          13 VWEIIGELGDGAFG-KVYKAKNKETGALAAAKVIET--KSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhheecCCCCe-EEEEEEECCCCceEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            34567789999999 999999988899999999853  223445678889999999999999998887777778999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |++++++.+.+..
T Consensus        90 ~~~~~~l~~~~~~  102 (292)
T cd06644          90 FCPGGAVDAIMLE  102 (292)
T ss_pred             cCCCCcHHHHHHh
Confidence            9999988776654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.45  E-value=1.1e-12  Score=84.38  Aligned_cols=90  Identities=13%  Similarity=0.102  Sum_probs=75.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|++| .||++.+..++..+|+|.+...  .......+.+|+.+++.++|+|++.+.+.+...+..|++||
T Consensus        20 ~y~~~~~lg~g~~g-~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          20 KYTRFEKIGQGASG-TVYTAIDIATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hceeeeeeccCCCe-EEEEEEECCCCCEEEEEEEecC--ccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            45667889999999 9999998888999999988532  22234567889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        97 ~~~~~~L~~~~~~  109 (297)
T cd06656          97 YLAGGSLTDVVTE  109 (297)
T ss_pred             ccCCCCHHHHHHh
Confidence            9999999887754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.45  E-value=4.4e-13  Score=87.06  Aligned_cols=87  Identities=18%  Similarity=0.104  Sum_probs=68.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHH-HHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELK-MLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ++||+|+|| .||++.+..++..+|+|.+..... .......+..|.. +++.++|+||+.+...+...+.+|++|||++
T Consensus         1 ~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFG-KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCE-EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            368999999 999999988999999999853221 1122344555654 6788899999998888878888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~~~L~~~l~~   89 (321)
T cd05603          80 GGELFFHLQR   89 (321)
T ss_pred             CCCHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.45  E-value=1.3e-12  Score=82.80  Aligned_cols=85  Identities=12%  Similarity=-0.062  Sum_probs=68.0

Q ss_pred             ccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++...  .++..+++|.+.... .......+.+|+.+++.++|||++.+.+.+......+++|||+++
T Consensus         2 ~lg~G~~g-~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           2 EIGNGWFG-KVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             cccccCCc-eEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            58999999 99998643  345679999885332 222334678899999999999999988887777788999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+++..
T Consensus        80 g~L~~~l~~   88 (269)
T cd05087          80 GDLKGYLRS   88 (269)
T ss_pred             CcHHHHHHH
Confidence            999888864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.45  E-value=5.9e-13  Score=85.24  Aligned_cols=92  Identities=18%  Similarity=0.131  Sum_probs=75.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|++| .||.+.+..+++.+|+|.+..... .......+.+|+.+++.+.|||++.+.+.+...+..|++||
T Consensus         3 y~~~~~ig~g~~~-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           3 FEFIKTLGTGSFG-RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             eEEEEEeecCCCe-EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            4456789999999 999999888899999998853221 12234568889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+++...
T Consensus        82 ~~~~~~L~~~~~~~   95 (290)
T cd05580          82 YVPGGELFSHLRKS   95 (290)
T ss_pred             cCCCCCHHHHHHHc
Confidence            99999998887653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.45  E-value=1.8e-12  Score=82.67  Aligned_cols=92  Identities=20%  Similarity=0.173  Sum_probs=71.8

Q ss_pred             hhhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~   88 (112)
                      .+.+.+.||+|+|| .||.+.    +..++..+++|.+...  .....+.+.+|+.++..++|+|++.+.+.+.  ....
T Consensus         5 ~~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           5 HLKFIQQLGKGNFG-SVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             cceeeeeccCCCCc-eEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            34566789999999 999986    3456788999998532  2334567889999999999999998877543  2456


Q ss_pred             eEEEEeccCCcchhhhhhhcC
Q psy16893         89 MYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      +++++||+++++|.+.+...+
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~  102 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHR  102 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcC
Confidence            899999999999999886543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.45  E-value=4.6e-13  Score=87.04  Aligned_cols=87  Identities=17%  Similarity=0.071  Sum_probs=70.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... ..........|..++..+ .|||++.+...+...+.+|++|||++
T Consensus         1 ~~lg~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           1 RVLGKGSFG-KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             CeeeeCCCe-EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence            368999999 999999988999999999864321 122335567788888766 59999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~i~~   89 (320)
T cd05590          80 GGDLMFHIQK   89 (320)
T ss_pred             CchHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0201|consensus

Probab=99.45  E-value=3.5e-14  Score=93.65  Aligned_cols=87  Identities=13%  Similarity=0.082  Sum_probs=77.1

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .+.||+|+|| .||++.+..+++.||+|.+..+ ....+...+++|+.+|..++++||..+++.+.....++++||||.|
T Consensus        18 ~~~IgrGsfG-~Vyk~~d~~t~k~vAiKii~Le-~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~g   95 (467)
T KOG0201|consen   18 LELIGRGSFG-EVYKAIDNKTKKVVAIKIIDLE-EAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGG   95 (467)
T ss_pred             chhccccccc-eeeeeeeccccceEEEEEechh-hcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcC
Confidence            3789999999 9999999999999999999643 3344567889999999999999999999988888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      |++.+.++.
T Consensus        96 Gsv~~lL~~  104 (467)
T KOG0201|consen   96 GSVLDLLKS  104 (467)
T ss_pred             cchhhhhcc
Confidence            999998864

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.45  E-value=5.4e-13  Score=86.64  Aligned_cols=87  Identities=14%  Similarity=0.018  Sum_probs=69.3

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhh-CCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCF-FKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... ..........|..++.. +.||||+.+.+.+...+.+|++|||++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           1 KMLGKGSFG-KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            368999999 999999998999999999864321 11223455667777765 479999998888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~l~~   89 (316)
T cd05619          80 GGDLMFHIQS   89 (316)
T ss_pred             CCcHHHHHHH
Confidence            9999888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0577|consensus

Probab=99.45  E-value=4.4e-14  Score=96.83  Aligned_cols=85  Identities=21%  Similarity=0.190  Sum_probs=69.9

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +..||-|+|| .||-+++..+.+.||+|++.-.. .....=+.++.|++.|+++.|||.|.+.+.+......|||||||-
T Consensus        31 LrEIGHGSFG-AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl  109 (948)
T KOG0577|consen   31 LREIGHGSFG-AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL  109 (948)
T ss_pred             HHHhcCCccc-eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh
Confidence            3579999999 99999999999999999985332 222223668899999999999999999998888888999999999


Q ss_pred             Ccchhhhh
Q psy16893         98 GEVHVRRW  105 (112)
Q Consensus        98 ~~~l~~~~  105 (112)
                      |. -.|.+
T Consensus       110 GS-AsDll  116 (948)
T KOG0577|consen  110 GS-ASDLL  116 (948)
T ss_pred             cc-HHHHH
Confidence            75 34443

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.45  E-value=5.8e-13  Score=86.46  Aligned_cols=87  Identities=14%  Similarity=0.004  Sum_probs=68.0

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.||+|.+..... .....+....|..++... .||||+.+...+...+.+|++|||++
T Consensus         1 ~~lG~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           1 KVLGKGSFG-KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            368999999 999999988999999999864321 112234455666666544 79999998888777788999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+++..
T Consensus        80 gg~L~~~~~~   89 (316)
T cd05592          80 GGDLMFHIQS   89 (316)
T ss_pred             CCcHHHHHHH
Confidence            9999888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.45  E-value=1.4e-13  Score=86.43  Aligned_cols=89  Identities=16%  Similarity=0.170  Sum_probs=73.2

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|+|| .||++.+..+++.+|+|.+..............+|+.++..++|+||+.+.+.......++++||++
T Consensus         2 ~~~~~lg~G~~g-~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    2 RLVKKLGSGGFG-TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEESSE-EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             EEeEEEEeCCCE-EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            456789999999 9999999999999999999643222222233456999999999999998888887788899999999


Q ss_pred             CCcchhhhhh
Q psy16893         97 LGEVHVRRWT  106 (112)
Q Consensus        97 ~~~~l~~~~~  106 (112)
                      .+++|.+.+.
T Consensus        81 ~~~~L~~~l~   90 (260)
T PF00069_consen   81 PGGSLQDYLQ   90 (260)
T ss_dssp             TTEBHHHHHH
T ss_pred             cccccccccc
Confidence            9999988776

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.45  E-value=7.8e-13  Score=84.08  Aligned_cols=90  Identities=12%  Similarity=0.046  Sum_probs=74.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +...+.||+|.|| .||++.+..++..+|+|.+... ......+.+.+|+.+++.+.|+|++.+.+.+...+..|+++||
T Consensus         6 y~~~~~l~~g~~~-~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           6 FTKLERIGKGSFG-EVYKGIDNRTKEVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHhcCCCCe-eEEEEEEcCCCeEEEEEEeccc-cchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            3455679999999 9999988888889999988532 2223456788999999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        84 ~~~~~L~~~~~~   95 (277)
T cd06642          84 LGGGSALDLLKP   95 (277)
T ss_pred             cCCCcHHHHhhc
Confidence            999999887754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.44  E-value=3.6e-13  Score=85.13  Aligned_cols=89  Identities=15%  Similarity=0.091  Sum_probs=70.2

Q ss_pred             cccccccCCcceEEEEEEcC----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDP----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.||.|+|| .|+++...    ..+..|++|.+.. .........+..|+..++.++||||+.+.+.+...+..++|+
T Consensus         3 ~~~~ig~G~fg-~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    3 LIKQIGEGSFG-KVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEESSE-EEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             EeeEEccCCCc-EEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccccccccc
Confidence            45689999999 99998765    3456799999843 233334678899999999999999999999888777799999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++|+|.+.+...
T Consensus        81 e~~~~g~L~~~L~~~   95 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSK   95 (259)
T ss_dssp             E--TTEBHHHHHHHT
T ss_pred             ccccccccccccccc
Confidence            999999999988764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.44  E-value=5.4e-13  Score=86.73  Aligned_cols=87  Identities=20%  Similarity=0.115  Sum_probs=68.5

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHH-HHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELK-MLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+..... .......+..|.. +++.++||||+.+...+...+.+|++|||++
T Consensus         1 ~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFG-KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            368999999 999999999999999999854321 1222344555554 5678899999998887777888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~l~~   89 (323)
T cd05575          80 GGELFFHLQR   89 (323)
T ss_pred             CCCHHHHHHh
Confidence            9999887754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.44  E-value=5.9e-13  Score=86.43  Aligned_cols=87  Identities=15%  Similarity=0.036  Sum_probs=70.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... .......+..|..++..+ .|||++.+.+.+...+.+|++|||++
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           1 KVLGKGSFG-KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            368999999 999999988899999999864321 122334567788888877 59999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+++..
T Consensus        80 ~~~L~~~~~~   89 (318)
T cd05570          80 GGDLMFHIQR   89 (318)
T ss_pred             CCCHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.44  E-value=6.8e-13  Score=86.34  Aligned_cols=87  Identities=21%  Similarity=0.144  Sum_probs=68.5

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHH-HHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELK-MLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+..... .......+..|.. +++.++||||+.+...+...+..|++|||+.
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFG-KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence            368999999 999999988999999999853321 1122344555554 5677899999998888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+++..
T Consensus        80 ~~~L~~~l~~   89 (325)
T cd05604          80 GGELFFHLQR   89 (325)
T ss_pred             CCCHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0592|consensus

Probab=99.44  E-value=1.6e-13  Score=92.68  Aligned_cols=93  Identities=18%  Similarity=0.084  Sum_probs=76.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh-hHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV-SSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .++..+.||+|+|+ .|++|....++..+|+|++.+...... ..+-+.+|-.+|..| .||.|+.+...+.+...+|+|
T Consensus        74 DF~Fg~~lGeGSYS-tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   74 DFKFGKILGEGSYS-TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hcchhheeccccce-eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            44788899999999 999999999999999999864321111 123356777788888 699999999999999999999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      +||+++|+|++.+++-
T Consensus       153 Le~A~nGdll~~i~K~  168 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKY  168 (604)
T ss_pred             EEecCCCcHHHHHHHh
Confidence            9999999999999763

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.44  E-value=8.6e-13  Score=85.83  Aligned_cols=91  Identities=13%  Similarity=-0.008  Sum_probs=71.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCC-eEeeeccCCCCCceEEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDN-VSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+..... .....+.+..|+.++..+.|++ ++.+...+...+.+|++|
T Consensus         2 y~~~~~lg~G~~g-~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           2 FNFLMVLGKGSFG-KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             ceEEEEEeeccCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            3456789999999 999999988899999999864321 1223456778899999888654 667777777778899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        81 E~~~~g~L~~~~~~   94 (324)
T cd05587          81 EYVNGGDLMYHIQQ   94 (324)
T ss_pred             cCCCCCcHHHHHHH
Confidence            99999999887754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.44  E-value=1.3e-12  Score=82.56  Aligned_cols=90  Identities=18%  Similarity=0.094  Sum_probs=73.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++....++..+|+|.+.... ........+.+|+.+++.++|||++.+.+.+...+..++++|
T Consensus         4 ~~i~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08228           4 FQIEKKIGRGQFS-EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE   82 (267)
T ss_pred             eeeeeeeccCCCe-eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence            4567789999999 99999988889999999875322 222334567889999999999999998887777788999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |+++++|.+.+.
T Consensus        83 ~~~~~~L~~~~~   94 (267)
T cd08228          83 LADAGDLSQMIK   94 (267)
T ss_pred             ecCCCcHHHHHH
Confidence            999998876653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.44  E-value=1.6e-12  Score=82.30  Aligned_cols=92  Identities=13%  Similarity=0.070  Sum_probs=74.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++....++.   .+++|.+... ......+.+..|+.+++.+.|||++.+.+.+......+++
T Consensus         6 ~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           6 VKIEEVIGAGEFG-EVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             eEEEeEecCCCCC-eEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            3567889999999 999988765543   5999988533 2234456789999999999999999998888888889999


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      |||+.+++|.++++...
T Consensus        84 ~e~~~~~~L~~~l~~~~  100 (269)
T cd05065          84 TEFMENGALDSFLRQND  100 (269)
T ss_pred             EecCCCCcHHHHHhhCC
Confidence            99999999888876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.44  E-value=1.3e-12  Score=83.53  Aligned_cols=88  Identities=18%  Similarity=-0.024  Sum_probs=71.8

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ..+.||+|+|| .||++.+..+++.+|+|.+...... ......+..|+.+++.++|+|++.+...+...+.++++|||+
T Consensus         4 ~~~~ig~G~~g-~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05630           4 QYRVLGKGGFG-EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             eeEEeecCCCe-EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence            44679999999 9999999999999999988532211 122345678999999999999998888777778899999999


Q ss_pred             CCcchhhhhh
Q psy16893         97 LGEVHVRRWT  106 (112)
Q Consensus        97 ~~~~l~~~~~  106 (112)
                      ++++|.+.+.
T Consensus        83 ~g~~L~~~l~   92 (285)
T cd05630          83 NGGDLKFHIY   92 (285)
T ss_pred             CCCcHHHHHH
Confidence            9999887774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.43  E-value=2e-12  Score=81.70  Aligned_cols=92  Identities=13%  Similarity=-0.001  Sum_probs=73.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++....+   ...+|+|.+... ........+.+|+.++..++|+|++.+.+.+...+..+++
T Consensus         6 ~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           6 VTIEKVIGGGEFG-EVCRGRLKLPGKKEIDVAIKTLKAG-SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             ceeeeEecCCccc-eEEEEEEccCCCCcceEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            4567789999999 9999876433   457999988533 2233456788899999999999999998888777889999


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      |||+++++|.+++....
T Consensus        84 ~e~~~~~~L~~~~~~~~  100 (266)
T cd05033          84 TEYMENGSLDKFLREND  100 (266)
T ss_pred             EEcCCCCCHHHHHHhcc
Confidence            99999999988876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.43  E-value=1.4e-12  Score=81.99  Aligned_cols=88  Identities=14%  Similarity=0.072  Sum_probs=71.0

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|+|| .||++... .+..+|+|.+....   .....+..|+.+++.++|||++.+.+.+...+..+++|||+
T Consensus         7 ~~~~~lg~G~~~-~vy~~~~~-~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           7 TFMKELGSGQFG-VVHLGKWR-AQIKVAIKAINEGA---MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             EEeeEecCCcCc-eEEEEEec-cCceEEEEecccCC---ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            455789999999 99998764 44579999875321   22356788999999999999999888888888899999999


Q ss_pred             CCcchhhhhhhcC
Q psy16893         97 LGEVHVRRWTKDQ  109 (112)
Q Consensus        97 ~~~~l~~~~~~~~  109 (112)
                      ++++|.+.+....
T Consensus        82 ~~~~L~~~~~~~~   94 (256)
T cd05114          82 ENGCLLNYLRQRQ   94 (256)
T ss_pred             CCCcHHHHHHhCc
Confidence            9999999886543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.43  E-value=2.1e-12  Score=82.29  Aligned_cols=89  Identities=15%  Similarity=0.084  Sum_probs=74.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..++..+++|.+...  .....+.+.+|+.+++.+.|+|++.+.+.+...+..|+++||
T Consensus         7 ~~i~~~lg~g~~g-~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFG-KVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCe-EEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            4566789999999 9999999888889999988532  233456788899999999999999988877777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.++++.+.+..
T Consensus        84 ~~~~~l~~~~~~   95 (282)
T cd06643          84 CAGGAVDAVMLE   95 (282)
T ss_pred             cCCCcHHHHHHh
Confidence            999998776654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.43  E-value=1.4e-12  Score=82.34  Aligned_cols=90  Identities=13%  Similarity=0.047  Sum_probs=74.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .+|.+.+..++..+|+|.+....  ......+.+|+.+++.++|||++.+.+.+...+..|+++|
T Consensus        10 ~~~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645          10 DFELIQRIGSGTYG-DVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHhCCCCCe-EEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            55677889999999 99999988889999999885321  2233457789999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        87 ~~~~~~L~~~~~~   99 (267)
T cd06645          87 FCGGGSLQDIYHV   99 (267)
T ss_pred             ccCCCcHHHHHHh
Confidence            9999999887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.43  E-value=9.2e-13  Score=83.91  Aligned_cols=89  Identities=21%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++....+++.+|+|.+..........+.+.+|+.++..++|+|++.+.+.+...+..|+++||
T Consensus         3 y~~~~~lg~g~~~-~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           3 YENLGLVGEGSYG-MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             eeEeeeeccCCCe-EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            3456789999999 999999888899999998854322222345677899999999999999998888888889999999


Q ss_pred             cCCcchhhhh
Q psy16893         96 RLGEVHVRRW  105 (112)
Q Consensus        96 ~~~~~l~~~~  105 (112)
                      +.++.+.+..
T Consensus        82 ~~~~~l~~~~   91 (286)
T cd07846          82 VDHTVLDDLE   91 (286)
T ss_pred             CCccHHHHHH
Confidence            9987765544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.43  E-value=8.7e-13  Score=84.00  Aligned_cols=92  Identities=13%  Similarity=0.037  Sum_probs=73.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|.|| .||++.+..++..+++|.+............+.+|+.+++.++|+|++.+.+.+.+.+..++++||
T Consensus         2 y~~~~~l~~g~~~-~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           2 YEKLEKIGEGTYG-TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             ceeEEEecccCCe-EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            3455789999999 999999988999999999864322222234567899999999999999999988888889999999


Q ss_pred             cCCcchhhhhhhcC
Q psy16893         96 RLGEVHVRRWTKDQ  109 (112)
Q Consensus        96 ~~~~~l~~~~~~~~  109 (112)
                      +.+ ++.+.+.+..
T Consensus        81 ~~~-~l~~~~~~~~   93 (284)
T cd07839          81 CDQ-DLKKYFDSCN   93 (284)
T ss_pred             CCC-CHHHHHHhcC
Confidence            986 6777665433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.43  E-value=8.4e-13  Score=83.10  Aligned_cols=90  Identities=14%  Similarity=0.024  Sum_probs=74.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||.+.... +..+++|.+...  .......+..|+.+++.++|+|++.+.+.+...+..+++||
T Consensus         7 ~y~~~~~ig~g~~~-~vy~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           7 EFTLERKLGSGYFG-EVWEGLWKN-RVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             HHHHhhhhccCCCc-cEEEeEecC-CCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            45677899999999 999998876 778999998532  22234568889999999999999998888888788999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        83 ~~~~~~L~~~~~~~   96 (261)
T cd05148          83 LMEKGSLLAFLRSP   96 (261)
T ss_pred             ecccCCHHHHHhcC
Confidence            99999999988653

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.43  E-value=1.7e-12  Score=89.06  Aligned_cols=92  Identities=12%  Similarity=-0.054  Sum_probs=73.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--------   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------   86 (112)
                      .|.+.+.||+|+|| .||++.+..+++.+|+|.+............+.+|+.++..+.|+|++.+...+...        
T Consensus        33 rY~i~~~LG~G~fG-~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         33 KYWISRVLGSGATG-TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CEEEEEEEecCCCE-EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            55677899999999 999999888999999999864433344456678899999999999999766543221        


Q ss_pred             CceEEEEeccCCcchhhhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..++++|||+++|+|.+.++.
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~  132 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKS  132 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHH
Confidence            136899999999999988754

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.43  E-value=1.1e-12  Score=83.05  Aligned_cols=91  Identities=14%  Similarity=-0.027  Sum_probs=73.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC---C-----hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ---S-----LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR   87 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~---~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (112)
                      +.+.+.||+|++| .||++....+++.+|+|.+.....   .     ....+.+..|+.+++.++|+|++.+.+.+...+
T Consensus         3 ~~~~~~lg~g~~~-~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           3 WVKGELIGKGTYG-RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             eeecceecccCce-EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4566789999999 999999888899999998752211   0     011245678999999999999999988888888


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..++++||+.+++|.+++..
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~  101 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRT  101 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhh
Confidence            89999999999999888754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.43  E-value=2.3e-12  Score=80.69  Aligned_cols=86  Identities=17%  Similarity=0.108  Sum_probs=70.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ++||+|+|| .||++... .+..+|+|.+.... .......+.+|+.++..+.|+|++.+.+.+...+..+++|||++++
T Consensus         1 ~~ig~g~~g-~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFG-EVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCc-eEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            368999999 99998754 67789999885432 2333456889999999999999999888887777899999999999


Q ss_pred             chhhhhhhc
Q psy16893        100 VHVRRWTKD  108 (112)
Q Consensus       100 ~l~~~~~~~  108 (112)
                      +|.+++...
T Consensus        78 ~L~~~~~~~   86 (250)
T cd05085          78 DFLSFLRKK   86 (250)
T ss_pred             cHHHHHHhc
Confidence            998887543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.43  E-value=2.3e-12  Score=81.16  Aligned_cols=89  Identities=13%  Similarity=0.075  Sum_probs=72.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|++| .||++... .+..+++|.+...   ....+.+.+|+.+++.++|+|++.+.+.+...+..+++||
T Consensus         7 ~~~~~~~lg~g~~g-~v~~~~~~-~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           7 SIKLVKKLGAGQFG-EVWMGYYN-NSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             HeEEeeecCCcCCc-eEEEEEec-CCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            45677889999999 99998854 4567999987532   2234678899999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        82 ~~~~~~L~~~l~~~   95 (261)
T cd05072          82 YMAKGSLLDFLKSD   95 (261)
T ss_pred             cCCCCcHHHHHHHh
Confidence            99999999888654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.43  E-value=1.6e-12  Score=82.78  Aligned_cols=89  Identities=17%  Similarity=0.126  Sum_probs=72.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .||++.+..++..+|+|.+............+.+|+.++..+.|+|++.+.+.+...+..|++|||
T Consensus         2 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           2 YTKIEKIGEGTYG-VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             ceEeeEecccCce-EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            3456789999999 999999888899999999864322222345677899999999999999999888888889999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +.+ ++.+.+.
T Consensus        81 ~~~-~l~~~~~   90 (285)
T cd07861          81 LSM-DLKKYLD   90 (285)
T ss_pred             CCC-CHHHHHh
Confidence            985 6666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.43  E-value=2e-12  Score=83.10  Aligned_cols=90  Identities=12%  Similarity=0.093  Sum_probs=74.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|++| .||++.+..++..+++|.+....  ......+.+|+.+++.+.|+|++.+.+.+......|+|||
T Consensus        21 ~y~~~~~lg~g~~~-~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          21 KYTRFEKIGQGASG-TVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             ceeeEEEecCCCCe-EEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            34566789999999 99999988889999999885322  2234667889999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        98 ~~~~~~L~~~~~~  110 (296)
T cd06654          98 YLAGGSLTDVVTE  110 (296)
T ss_pred             ccCCCCHHHHHHh
Confidence            9999999888754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.43  E-value=1.7e-12  Score=83.71  Aligned_cols=91  Identities=16%  Similarity=0.042  Sum_probs=74.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.|++|.+..... .......+.+|+.+++.++|+|++.+.+.+...+.++++||
T Consensus         3 y~~~~~l~~g~~~-~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           3 FETIKLISNGAYG-AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             ceEeeEeecCCCe-eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            4456789999999 999999998999999998854321 12234567789999999999999998888777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        82 ~~~g~~L~~~l~~   94 (305)
T cd05609          82 YVEGGDCATLLKN   94 (305)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999998887754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0694|consensus

Probab=99.43  E-value=1.2e-12  Score=90.39  Aligned_cols=90  Identities=11%  Similarity=-0.033  Sum_probs=74.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+..+||+|+|| .|+++..+.+++.+|+|.+.++.. ...+......|.+++.... ||.++.+.+.+.+.+++|+|
T Consensus       369 ~F~~l~vLGkGsFG-kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv  447 (694)
T KOG0694|consen  369 DFRLLAVLGRGSFG-KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV  447 (694)
T ss_pred             ceEEEEEeccCcCc-eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence            45677899999999 999999999999999999976532 2233466777888887665 99999999999999999999


Q ss_pred             EeccCCcchhhhh
Q psy16893         93 LTLRLGEVHVRRW  105 (112)
Q Consensus        93 ~e~~~~~~l~~~~  105 (112)
                      |||+.||+++-..
T Consensus       448 mey~~Ggdm~~~~  460 (694)
T KOG0694|consen  448 MEYVAGGDLMHHI  460 (694)
T ss_pred             EEecCCCcEEEEE
Confidence            9999999954433

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.42  E-value=1.3e-12  Score=84.38  Aligned_cols=90  Identities=14%  Similarity=0.037  Sum_probs=72.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... .......+.+|+.+++.++|+|++.+.+.+...+..+++||
T Consensus         7 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           7 TYIKLEKLGEGTYA-TVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             ceEEEEEecccCCE-EEEEEEecCCCCeEEEEEeeccc-cCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            35667789999999 99999988889999999985332 12223456789999999999999999988888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ ++.+.+..
T Consensus        85 ~~~~-~l~~~~~~   96 (309)
T cd07872          85 YLDK-DLKQYMDD   96 (309)
T ss_pred             CCCC-CHHHHHHh
Confidence            9986 67776643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.42  E-value=1.6e-12  Score=84.81  Aligned_cols=87  Identities=14%  Similarity=0.008  Sum_probs=70.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++....+++.+|+|.+..... .......+..|+.++..+ .|+|++.+.+.+...+.+|+||||++
T Consensus         1 ~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           1 RVIGRGSYA-KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            368999999 999999988999999999964321 122345677888888887 59999999888878888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~~~L~~~~~~   89 (327)
T cd05617          80 GGDLMFHMQR   89 (327)
T ss_pred             CCcHHHHHHH
Confidence            9999877653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=1.1e-12  Score=83.66  Aligned_cols=90  Identities=14%  Similarity=0.072  Sum_probs=74.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++....++..+|+|.+.... .......+.+|+.++..++|+|++.+.+.+...+..|++|||
T Consensus         3 ~~~~~~ig~g~~g-~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           3 IEVLDELGKGNYG-SVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             hhhhhhhcccCCe-EEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            3456789999999 99999988889999999885322 222345678899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        81 ~~~~~l~~~~~~   92 (286)
T cd06622          81 MDAGSLDKLYAG   92 (286)
T ss_pred             cCCCCHHHHHHh
Confidence            999998776654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.42  E-value=3.1e-12  Score=80.78  Aligned_cols=91  Identities=13%  Similarity=0.046  Sum_probs=72.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc---CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF---QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~   90 (112)
                      +.+.+.||+|+|| .||.+.+..++..+++|.+....   ......+.+.+|+.++..+.|+|++.+.+.+.+  ...++
T Consensus         4 ~~~~~~l~~g~~g-~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           4 WRLGKLLGQGAFG-RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             ceEeeEEecCCce-EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            4556789999999 99999988889999999875321   112234678889999999999999988776554  35688


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+++++|.+++..
T Consensus        83 ~v~e~~~~~~L~~~l~~   99 (265)
T cd06652          83 IFMEHMPGGSIKDQLKS   99 (265)
T ss_pred             EEEEecCCCcHHHHHHH
Confidence            99999999999888754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.42  E-value=2.8e-12  Score=80.34  Aligned_cols=86  Identities=15%  Similarity=0.139  Sum_probs=71.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      +.||+|++| .||++.... +..+++|.+..... ......+..|+.+++.+.|+|++.+.+.+......++++||+.++
T Consensus         1 ~~lg~g~~g-~v~~~~~~~-~~~v~~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFG-DVYKGVLKG-NTEVAVKTCRSTLP-PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCc-eEEEEEEeC-CCcEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            368999999 999998876 88899998864322 234467889999999999999999888888888899999999999


Q ss_pred             chhhhhhhc
Q psy16893        100 VHVRRWTKD  108 (112)
Q Consensus       100 ~l~~~~~~~  108 (112)
                      +|.+++...
T Consensus        78 ~l~~~l~~~   86 (251)
T cd05041          78 SLLTFLRKK   86 (251)
T ss_pred             cHHHHHHhc
Confidence            998888653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.42  E-value=1.8e-12  Score=82.55  Aligned_cols=90  Identities=21%  Similarity=0.105  Sum_probs=71.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+...||+|++| .||++.+..+++.+|+|.+..........+.+.+|+.+++.++|+|++.+.+.+......+++|||
T Consensus         3 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           3 YEKLSKIGEGSYG-VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             eeeeeeecccCCe-EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            3455689999999 999999888899999998853322222235577899999999999999998888888889999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      ++++++.....
T Consensus        82 ~~~~~l~~~~~   92 (286)
T cd07847          82 CDHTVLNELEK   92 (286)
T ss_pred             cCccHHHHHHh
Confidence            99887655543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.42  E-value=2.3e-12  Score=81.14  Aligned_cols=91  Identities=15%  Similarity=0.116  Sum_probs=76.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|++| .+|++....++..+++|.+..........+.+.+|+.+++.++|+|++.+.+.....+..++++||
T Consensus         2 y~~~~~lg~G~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           2 WQRGNKIGGGTFG-KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             ceeeeEeecCCCc-EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            3456789999999 999999888889999999864433223457788999999999999999988877777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        81 ~~~~~L~~~~~~   92 (264)
T cd06626          81 CSGGTLEELLEH   92 (264)
T ss_pred             CCCCcHHHHHhh
Confidence            999999887754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.42  E-value=2.8e-12  Score=81.14  Aligned_cols=86  Identities=14%  Similarity=-0.035  Sum_probs=67.3

Q ss_pred             ccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++...  .....+++|.+... ........+.+|+.+++.++|+||+.+.+.+......|++|||+++
T Consensus         2 ~lg~G~fg-~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           2 EIGNGWFG-KVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             cCCccCCc-eEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            58999999 99988532  23456888877532 2223345678899999999999999998888887889999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      ++|.+++...
T Consensus        80 g~L~~~l~~~   89 (269)
T cd05042          80 GDLKNYLRSN   89 (269)
T ss_pred             CcHHHHHHhc
Confidence            9999988654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PHA02988 hypothetical protein; Provisional

Probab=99.42  E-value=2.3e-12  Score=82.52  Aligned_cols=86  Identities=10%  Similarity=-0.057  Sum_probs=68.2

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhh-HHHHHHHHHHHhhCCCCCeEeeeccCCC----CCceEEEEe
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVS-SKRVFRELKMLCFFKHDNVSITQHTPYT----TRRMYPGLT   94 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e   94 (112)
                      ..+++|+++ .||++..  ++..||+|.+......... .+.+.+|+.++.+++||||+.+.+.+.+    ...++++||
T Consensus        26 ~~i~~g~~~-~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQN-SIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCce-EEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence            368999999 9999886  5788999998643222222 3567799999999999999988876544    456899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++|+|.+.+.+.
T Consensus       103 y~~~g~L~~~l~~~  116 (283)
T PHA02988        103 YCTRGYLREVLDKE  116 (283)
T ss_pred             eCCCCcHHHHHhhC
Confidence            99999999988653

>KOG0193|consensus

Probab=99.42  E-value=8.2e-13  Score=90.30  Aligned_cols=97  Identities=15%  Similarity=-0.029  Sum_probs=79.3

Q ss_pred             CCCCccchhh---hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC
Q psy16893          7 FSRPSDEIGT---MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP   83 (112)
Q Consensus         7 ~~~~~~~~~~---~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (112)
                      .+...|+|..   .+...||+|+|| .||++..-   -.||||.++.+...+...+.|..|+.++++.+|.||+-+.+++
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFG-tV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~  457 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFG-TVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC  457 (678)
T ss_pred             ccccccccCHHHhhccceecccccc-ceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh
Confidence            3445555533   677789999999 99998764   3499999986666667789999999999999999999888888


Q ss_pred             CCCCceEEEEeccCCcchhhhhhhc
Q psy16893         84 YTTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        84 ~~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ..+.. .+|..+|+|.+|+.++.-.
T Consensus       458 ~~p~~-AIiTqwCeGsSLY~hlHv~  481 (678)
T KOG0193|consen  458 MNPPL-AIITQWCEGSSLYTHLHVQ  481 (678)
T ss_pred             cCCce-eeeehhccCchhhhhccch
Confidence            77665 8999999999998887643

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.41  E-value=4e-12  Score=81.16  Aligned_cols=91  Identities=12%  Similarity=0.008  Sum_probs=71.8

Q ss_pred             hhhcccccccCCcceEEEEEEc----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~   88 (112)
                      .+.+.+.||+|+|| .||.+..    ..++..+|+|.+.... .......+.+|+.+++.+.|+|++.+.+.+..  ...
T Consensus         5 ~~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFG-KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCce-eEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            45677889999999 9998863    4567889999985332 23334678899999999999999988776655  356


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+++|||+++++|.+++..
T Consensus        83 ~~lv~e~~~g~~L~~~l~~  101 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPR  101 (284)
T ss_pred             eEEEEEccCCCCHHHHHHh
Confidence            8999999999999888754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0578|consensus

Probab=99.41  E-value=2.7e-13  Score=91.66  Aligned_cols=88  Identities=13%  Similarity=0.075  Sum_probs=73.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .....||+|+-| .||.+....+++.||+|++....  ....+-++.|+.+|+..+|+|||.+.+.+.-.+.+|+|||||
T Consensus       276 ~~~~kigqgaSG-~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  276 TDFKKIGQGATG-GVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             cchhhhcccccc-ceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            344579999999 99999999999999999995432  233456889999999999999998877666668899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      +||+|-|-+..
T Consensus       353 ~ggsLTDvVt~  363 (550)
T KOG0578|consen  353 EGGSLTDVVTK  363 (550)
T ss_pred             CCCchhhhhhc
Confidence            99998886654

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.41  E-value=1.9e-12  Score=83.28  Aligned_cols=90  Identities=16%  Similarity=0.050  Sum_probs=73.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+.... .......+.+|+.+++.++|+||+.+.+.+...+.+++++|
T Consensus         7 ~y~~~~~lg~g~~g-~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           7 TYIKLDKLGEGTYA-TVYKGRSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ceEEeeEeccCcCE-EEEEEEEcCCCcEEEEEEEeccc-ccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            45666789999999 99999988889999999985332 12223456789999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ +|.+.+..
T Consensus        85 ~~~~-~l~~~l~~   96 (301)
T cd07873          85 YLDK-DLKQYLDD   96 (301)
T ss_pred             cccc-CHHHHHHh
Confidence            9985 67776643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.41  E-value=3.2e-12  Score=80.52  Aligned_cols=90  Identities=13%  Similarity=0.090  Sum_probs=75.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||.|++| .+|++....++..+++|.+..... ....+.+.+|+.+++.++|+|++.+...+...+..|+++|+
T Consensus         3 y~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           3 YELIEVIGVGATA-VVYAAICLPNNEKVAIKRIDLEKC-QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             ceeeeeecCCCCe-EEEEEEEcCCCcEEEEEEeccCCc-chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4556789999999 999999887888999998853322 22456788999999999999999888877778889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        81 ~~~~~l~~~~~~   92 (267)
T cd06610          81 LSGGSLLDIMKS   92 (267)
T ss_pred             cCCCcHHHHHHH
Confidence            999999888864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.41  E-value=2e-12  Score=82.39  Aligned_cols=90  Identities=17%  Similarity=0.102  Sum_probs=72.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +...+.||+|++| .||++.+..++..+++|.+............+..|++++++++|+|++.+.+.+...+..+++|||
T Consensus         2 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           2 FQKVEKIGEGTYG-VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             ceeeeeecCCCce-EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            3456789999999 999999888899999998864332222335678899999999999999999888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+ .|.+.+..
T Consensus        81 ~~~-~l~~~~~~   91 (284)
T cd07860          81 LHQ-DLKKFMDA   91 (284)
T ss_pred             ccc-CHHHHHHh
Confidence            974 67766643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.41  E-value=2.3e-12  Score=83.92  Aligned_cols=87  Identities=15%  Similarity=0.048  Sum_probs=71.6

Q ss_pred             cccccC--CcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLL--SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g--~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ..||.|  +|+ .||.+.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..++++||+.
T Consensus         4 ~~ig~g~~~~~-~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLT-SVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCce-eEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            356666  888 99999998899999999886433333445678889999999999999999998888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      ++++.+.+..
T Consensus        83 ~~~l~~~l~~   92 (328)
T cd08226          83 YGSANSLLKT   92 (328)
T ss_pred             CCCHHHHHHh
Confidence            9998887754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.41  E-value=1.6e-12  Score=91.86  Aligned_cols=92  Identities=10%  Similarity=-0.024  Sum_probs=75.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+.... ........+..|+.++..++|+||+.+...+...+.+|+||
T Consensus         5 ~y~i~~~LG~G~fg-~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           5 EFVIVKPISRGAFG-KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CEEEEEEEecCCCe-EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            34567889999999 99999998899999999986432 22233466788999999999999999888777778899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+++|.+++..
T Consensus        84 Ey~~g~~L~~li~~   97 (669)
T cd05610          84 EYLIGGDVKSLLHI   97 (669)
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999887753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.41  E-value=1.5e-12  Score=82.86  Aligned_cols=86  Identities=10%  Similarity=-0.050  Sum_probs=66.0

Q ss_pred             ccccCCcceEEEEEEcCC------------------------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCe
Q psy16893         21 EVGLLSICSSVKAVTDPR------------------------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV   76 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~------------------------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~ni   76 (112)
                      .||+|+|| .||++....                        ....+++|.+...  .......+..|+.+++.++|+||
T Consensus         2 ~lG~G~~~-~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRT-NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCccccc-ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCe
Confidence            68999999 999876321                        1235888887421  12334567788899999999999


Q ss_pred             EeeeccCCCCCceEEEEeccCCcchhhhhhhcC
Q psy16893         77 SITQHTPYTTRRMYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        77 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      +.+.+.+......++||||+++++|.+++....
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~  111 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK  111 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC
Confidence            999998888778899999999999888776543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.41  E-value=2.8e-12  Score=82.01  Aligned_cols=89  Identities=16%  Similarity=-0.026  Sum_probs=71.5

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ..+.||+|+|| .||.+....+++.+|+|.+...... ......+.+|+.++..++|+|++.+...+...+.++++|||+
T Consensus         4 ~~~~lg~G~~g-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05632           4 QYRVLGKGGFG-EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             EEEEEecCCCe-EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence            34679999999 9999999889999999988532211 122345678999999999999998888777778899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .+++|.+.+..
T Consensus        83 ~~~~L~~~~~~   93 (285)
T cd05632          83 NGGDLKFHIYN   93 (285)
T ss_pred             cCccHHHHHHH
Confidence            99988776643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.40  E-value=3.4e-12  Score=81.98  Aligned_cols=90  Identities=14%  Similarity=0.123  Sum_probs=74.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++....++..+++|.+...  .......+.+|+.+++.++|||++.+.+.+...+..|+++|
T Consensus        20 ~~~~~~~lg~g~~g-~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          20 KYTRFEKIGQGASG-TVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hceeeeEecCCCCe-EEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            45667889999999 9999988778889999988532  12234567889999999999999999888877788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        97 ~~~~~~L~~~~~~  109 (293)
T cd06647          97 YLAGGSLTDVVTE  109 (293)
T ss_pred             cCCCCcHHHHHhh
Confidence            9999999887754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.40  E-value=1.4e-12  Score=84.65  Aligned_cols=87  Identities=14%  Similarity=0.016  Sum_probs=69.2

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... ..........|..++... .|+|++.+.+.+...+.+|+||||+.
T Consensus         1 ~~lg~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           1 KVLGKGSFG-KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            368999999 999999998999999999864321 112234556677777654 79999998888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~i~~   89 (316)
T cd05620          80 GGDLMFHIQD   89 (316)
T ss_pred             CCcHHHHHHH
Confidence            9999888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.40  E-value=4.3e-12  Score=80.23  Aligned_cols=90  Identities=13%  Similarity=-0.000  Sum_probs=68.8

Q ss_pred             hcccccccCCcceEEEEEEcCC---CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC------
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR------   87 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------   87 (112)
                      .+.+.||+|+|| .||.+....   ++..+|+|.+............+.+|+..++.++|+|++.+.+.+....      
T Consensus         2 ~~~~~lg~G~~g-~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           2 KLGKILGEGEFG-SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             ccccccCcCCCc-eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            356789999999 999987543   3477999998644333334567889999999999999998777554422      


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..++++||+++++|.+.+..
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~  100 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLY  100 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHH
Confidence            37999999999998877743

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.40  E-value=2.3e-12  Score=83.83  Aligned_cols=90  Identities=13%  Similarity=-0.006  Sum_probs=70.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.||+|+|| .||++.+..++..+|+|.+..... ..........|..++..+. |++++.+...+...+.+|+|||
T Consensus         3 ~~~~~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           3 NFLMVLGKGSFG-KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             eEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            456789999999 999999988899999999864321 1122344667777777775 7888888887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        82 ~~~~g~L~~~~~~   94 (323)
T cd05616          82 YVNGGDLMYQIQQ   94 (323)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999887754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0594|consensus

Probab=99.40  E-value=1.1e-12  Score=84.51  Aligned_cols=90  Identities=19%  Similarity=0.187  Sum_probs=72.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCC-eEeeeccCCCCC------c
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN-VSITQHTPYTTR------R   88 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------~   88 (112)
                      +..++.||+|+|| .||++....+|+.||+|+++.............+|+-+++.++|+| |+.+.+++...+      .
T Consensus        13 ~~~~eklGeGtyg-~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   13 YEKVEKLGEGTYG-VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHhCCCCce-EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            3445679999999 9999999999999999999754332233455688999999999999 999999887765      8


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +++++||+..+ |-+.+..
T Consensus        92 l~lvfe~~d~D-L~~ymd~  109 (323)
T KOG0594|consen   92 LYLVFEFLDRD-LKKYMDS  109 (323)
T ss_pred             EEEEEEeeccc-HHHHHHh
Confidence            99999999874 5555543

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=3.1e-12  Score=82.75  Aligned_cols=91  Identities=19%  Similarity=0.066  Sum_probs=75.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|++| .||.+....++..+|+|.+....... ...+.+..|+.++..+.|+|++.+.+.+......|++||
T Consensus         3 y~~~~~ig~g~~g-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           3 FKKIKLLGKGDVG-RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             eEEeeeecCCccE-EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            3455789999999 99999998889999999986432221 234668889999999999999998888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus        82 ~~~~~~L~~~~~~   94 (316)
T cd05574          82 YCPGGELFRLLQR   94 (316)
T ss_pred             ecCCCCHHHHHHh
Confidence            9999999888764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=3.1e-12  Score=81.18  Aligned_cols=90  Identities=12%  Similarity=0.063  Sum_probs=74.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||.|++| .||++....++..+++|.+.... .......+.+|+.+++.++|+|++.+.+.+.....+|+++||
T Consensus         3 y~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           3 FTLLECIGKGSFG-EVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             hhhhhhhcCCCCe-EEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3455789999999 99999988889999999885332 223345678899999999999999888877777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+++..
T Consensus        81 ~~~~~L~~~~~~   92 (274)
T cd06609          81 CGGGSCLDLLKP   92 (274)
T ss_pred             eCCCcHHHHHhh
Confidence            999999888764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.40  E-value=2.5e-12  Score=81.20  Aligned_cols=88  Identities=14%  Similarity=0.012  Sum_probs=73.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .||++.....+..+++|.+...   ......+.+|+.++..+.|+|++.+.+.+...+.++++|||
T Consensus         8 ~~~~~~ig~g~~~-~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           8 ITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             eEEeeecCCcccc-eEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            3456789999999 9999998888899999987532   22345688899999999999999988888777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        84 ~~~~~L~~~~~~   95 (263)
T cd05052          84 MTYGNLLDYLRE   95 (263)
T ss_pred             CCCCcHHHHHHh
Confidence            999999888754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.40  E-value=3.8e-12  Score=80.37  Aligned_cols=90  Identities=17%  Similarity=0.093  Sum_probs=72.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-------hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-------VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+...||+|++| .||.+.+..++..+++|.+.......       ...+.+.+|+.+++.++|||++.+.+.+...+..
T Consensus         3 ~~~~~ig~g~~~-~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           3 IKGALIGSGSFG-SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             cccceeecCCCe-EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            455689999999 99999988888999999885432111       1124578899999999999999988887777889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      ++++||+++++|.+++..
T Consensus        82 ~lv~e~~~~~~L~~~l~~   99 (267)
T cd06628          82 NIFLEYVPGGSVAALLNN   99 (267)
T ss_pred             EEEEEecCCCCHHHHHHh
Confidence            999999999998887754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG4721|consensus

Probab=99.40  E-value=5e-13  Score=91.47  Aligned_cols=78  Identities=14%  Similarity=0.001  Sum_probs=66.9

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      +.||+|+.| .||.+...  ++.||||+++..         -..+++.|++|+|+||+.+.++|.....+|||||||..|
T Consensus       130 eWlGSGaQG-AVF~Grl~--netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  130 EWLGSGAQG-AVFLGRLH--NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhccCccc-ceeeeecc--CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            478999999 99998754  678999988521         135888999999999999999999988899999999999


Q ss_pred             chhhhhhhcC
Q psy16893        100 VHVRRWTKDQ  109 (112)
Q Consensus       100 ~l~~~~~~~~  109 (112)
                      .|.+.|+..+
T Consensus       198 qL~~VLka~~  207 (904)
T KOG4721|consen  198 QLYEVLKAGR  207 (904)
T ss_pred             cHHHHHhccC
Confidence            9999888654

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.40  E-value=3.6e-12  Score=81.21  Aligned_cols=85  Identities=14%  Similarity=0.050  Sum_probs=70.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.++||+|+|| .||++.+..+++.+|+|.+.... .....+.+.+|+.++..+.|||++.+.+.+...+..+++|||+
T Consensus         4 ~~~~~lg~g~~~-~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           4 QYQEILGHGNGG-TVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             hheeeeccCCCe-EEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            355789999999 99999988899999999885432 2233466889999999999999999988888888899999999


Q ss_pred             CCcchhh
Q psy16893         97 LGEVHVR  103 (112)
Q Consensus        97 ~~~~l~~  103 (112)
                      +++++..
T Consensus        82 ~~~~l~~   88 (279)
T cd06619          82 DGGSLDV   88 (279)
T ss_pred             CCCChHH
Confidence            9987753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.40  E-value=3.9e-12  Score=81.09  Aligned_cols=89  Identities=10%  Similarity=0.008  Sum_probs=71.5

Q ss_pred             hhcccccccCCcceEEEEEEc----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTD----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      +.+.+.||+|+|| .||++..    ...+..+++|.+... ........+.+|+.+++.++|+|++.+.+.+...+..|+
T Consensus         7 ~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           7 VRFMEELGECAFG-KIYKGHLYLPGMDHAQLVAIKTLKDI-NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             ceeeeeccccCCc-ceEEEEEecCCCCCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4566789999999 9999874    335577999988532 223334668889999999999999998887777778999


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      +|||+++++|.+++.
T Consensus        85 v~e~~~~~~L~~~l~   99 (283)
T cd05090          85 LFEYLNQGDLHEFLI   99 (283)
T ss_pred             EEEcCCCCcHHHHHH
Confidence            999999999988874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.40  E-value=2.2e-12  Score=83.97  Aligned_cols=87  Identities=17%  Similarity=0.091  Sum_probs=67.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHH-HHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELK-MLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..++..+|+|.+..... .......+..|.. +++.+.|+||+.+...+...+.+|++|||+.
T Consensus         1 ~~lg~G~fg-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFG-KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCe-EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence            368999999 999999988999999999853211 1122234444544 5677899999998888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~~~L~~~~~~   89 (325)
T cd05602          80 GGELFYHLQR   89 (325)
T ss_pred             CCcHHHHHHh
Confidence            9999888754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.40  E-value=3.7e-12  Score=80.28  Aligned_cols=86  Identities=17%  Similarity=0.118  Sum_probs=72.0

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||.|++| .+|.+.+..++..+++|.+..... .....+.+.+|+.+++.++|+|++.+.+.+.....+|+++||+++++
T Consensus         1 lg~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFG-RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCce-EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            6899999 999999988899999999864322 12334678899999999999999998888777788999999999999


Q ss_pred             hhhhhhhc
Q psy16893        101 HVRRWTKD  108 (112)
Q Consensus       101 l~~~~~~~  108 (112)
                      |.+++...
T Consensus        80 L~~~l~~~   87 (262)
T cd05572          80 LWTILRDR   87 (262)
T ss_pred             HHHHHhhc
Confidence            99888653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.40  E-value=3.3e-12  Score=81.24  Aligned_cols=85  Identities=18%  Similarity=0.008  Sum_probs=69.5

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||+|+|| .||.+.+..++..+++|.+..... .......+..|+.+++.++|||++.+...+...+..|++|||+++++
T Consensus         1 lg~g~~g-~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFG-EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCce-eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            6899999 999999888899999998853211 11223456789999999999999998887777788999999999999


Q ss_pred             hhhhhhh
Q psy16893        101 HVRRWTK  107 (112)
Q Consensus       101 l~~~~~~  107 (112)
                      |.+++..
T Consensus        80 L~~~l~~   86 (277)
T cd05577          80 LKYHIYN   86 (277)
T ss_pred             HHHHHHH
Confidence            9888754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.40  E-value=5.9e-12  Score=79.60  Aligned_cols=90  Identities=13%  Similarity=0.026  Sum_probs=72.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ...+.||+|+|| .||++....++.   .+++|.+... ......+.+..|+.++..+.|+|++.+.+.+...+..|++|
T Consensus         8 ~~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (268)
T cd05063           8 TKQKVIGAGEFG-EVFRGILKMPGRKEVAVAIKTLKPG-YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT   85 (268)
T ss_pred             eEeeEecCCCCc-cEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence            455789999999 999998755443   6999988532 22334567889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++++|.+.+...
T Consensus        86 e~~~~~~L~~~~~~~  100 (268)
T cd05063          86 EYMENGALDKYLRDH  100 (268)
T ss_pred             EcCCCCCHHHHHHhc
Confidence            999999988887643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.39  E-value=3.4e-12  Score=84.09  Aligned_cols=89  Identities=25%  Similarity=0.204  Sum_probs=69.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+............+.+|+.+++.++||||+.+.+.+..      ...
T Consensus        22 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          22 RYQQLKPIGSGAQG-IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             ceEEEEEeecCCCE-EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence            45677899999999 99999998899999999986443333445677899999999999999987775543      235


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      +|++|||+.++ +.+.+
T Consensus       101 ~~lv~e~~~~~-l~~~~  116 (359)
T cd07876         101 VYLVMELMDAN-LCQVI  116 (359)
T ss_pred             eEEEEeCCCcC-HHHHH
Confidence            79999999875 55444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.39  E-value=4.7e-12  Score=79.55  Aligned_cols=90  Identities=17%  Similarity=0.179  Sum_probs=72.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e   94 (112)
                      .+.+.||.|+|| .||++.+..++..+++|.+..........+.+..|+.+++.++|+|++.+.+.+.  .....|+++|
T Consensus         3 ~~~~~lg~g~~~-~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           3 EVLETIGKGSFG-TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             eeeeeeccCCCe-EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            455789999999 9999998888999999988543333344567888999999999999998776443  3556899999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        82 ~~~~~~L~~~l~~   94 (265)
T cd08217          82 YCEGGDLAQLIQK   94 (265)
T ss_pred             hccCCCHHHHHHH
Confidence            9999998887754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.39  E-value=3e-12  Score=82.18  Aligned_cols=91  Identities=11%  Similarity=0.014  Sum_probs=71.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC--------------CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeee
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD--------------GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQ   80 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~--------------~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~   80 (112)
                      .+.+.+.||+|+|| .||.+.+..+              ...+|+|.+... ........+.+|+.++..++|+|++.+.
T Consensus         6 ~~~~~~~lg~G~~g-~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           6 QLRLKEKLGEGQFG-EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hCeehhccCCCCCc-eEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            34567889999999 9998876432              235899988633 2233345688999999999999999998


Q ss_pred             ccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         81 HTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        81 ~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +.+...+..+++|||+.+++|.+.+..
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~  110 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQ  110 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHh
Confidence            888887889999999999999887743

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.39  E-value=2.3e-12  Score=82.11  Aligned_cols=89  Identities=19%  Similarity=0.125  Sum_probs=72.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .+|++.+..+++.+++|.+............+.+|+++++.+.|+|++.+.+.+...+..++++||
T Consensus         3 y~~~~~i~~g~~~-~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           3 YEVLGVVGEGAYG-VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             eeEEEEecccCCe-eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            3456789999999 999999988899999998854322233346788999999999999999998888778889999999


Q ss_pred             cCCcchhhhh
Q psy16893         96 RLGEVHVRRW  105 (112)
Q Consensus        96 ~~~~~l~~~~  105 (112)
                      ++++.+....
T Consensus        82 ~~~~~l~~~~   91 (288)
T cd07833          82 VERTLLELLE   91 (288)
T ss_pred             CCCCHHHHHH
Confidence            9986654433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.39  E-value=3.9e-12  Score=82.06  Aligned_cols=91  Identities=19%  Similarity=0.214  Sum_probs=71.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCe--EEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRR--VALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~--va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++..  +++|.+.. .........+.+|+.++.++ +|+|++.+.+.+...+..|+
T Consensus         8 ~~~~~~~lg~G~~g-~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           8 DIKFQDVIGEGNFG-QVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hceeeeeecCCCCc-eEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            34566789999999 9999987766643  57776642 12223345678899999999 79999999888888788999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ++||+++++|.+++..
T Consensus        86 v~e~~~~~~L~~~l~~  101 (303)
T cd05088          86 AIEYAPHGNLLDFLRK  101 (303)
T ss_pred             EEEeCCCCcHHHHHHh
Confidence            9999999999988864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.39  E-value=2.3e-12  Score=81.40  Aligned_cols=90  Identities=20%  Similarity=0.101  Sum_probs=73.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|++| .||++....++..+++|.+..... .......+.+|+.+++.+.|+|++.+...+...+..+++||
T Consensus         4 y~~~~~ig~g~~g-~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           4 FRIEKKIGRGQFS-EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhcccCCe-EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            4566789999999 999999888899999998753221 22234578889999999999999998888777788999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |+++++|.+.+.
T Consensus        83 ~~~~~~L~~~~~   94 (267)
T cd08229          83 LADAGDLSRMIK   94 (267)
T ss_pred             ecCCCCHHHHHH
Confidence            999999887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.39  E-value=2.5e-12  Score=82.50  Aligned_cols=89  Identities=18%  Similarity=0.065  Sum_probs=72.5

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC---hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS---LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.||+|++| .||++.+..+++.+++|.+......   ......+..|+.+++.++|+|++.+.+.+...+..++||
T Consensus         3 ~~~~~lg~g~~~-~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           3 EKGKKLGEGTYA-VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             eeeeeeeecccc-EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            445689999999 9999998888999999998643222   222355678999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+ +++|.+.+..
T Consensus        82 e~~-~~~L~~~i~~   94 (298)
T cd07841          82 EFM-ETDLEKVIKD   94 (298)
T ss_pred             ccc-CCCHHHHHhc
Confidence            999 7788887754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.39  E-value=3.4e-12  Score=81.08  Aligned_cols=91  Identities=18%  Similarity=0.026  Sum_probs=73.5

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++...     .+...+|+|.+.... .....+.+.+|+.++..+.|+|++.+.+.+......
T Consensus         6 ~~~~~~~lg~g~~~-~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           6 TIVLKRELGEGAFG-KVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             HhhHHhhccccCCc-eEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            34567889999999 99998753     235679999885332 222346788999999999999999988888887889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        84 ~lv~e~~~~~~L~~~i~~  101 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRS  101 (280)
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.39  E-value=4.5e-12  Score=81.58  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=75.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||.|.+| .||++.+..+++.+++|.+...  .......+.+|+.+++.++|+|++.+.+.+...+.+|+++|
T Consensus        20 ~y~~~~~lg~g~~g-~vy~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          20 KYTRYEKIGQGASG-TVFTAIDVATGQEVAIKQINLQ--KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             eEEEEEEEecCCCe-EEEEEEEcCCCcEEEEEEEecc--cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            34566789999999 9999998889999999988532  22234567889999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus        97 ~~~~~~L~~~~~~  109 (296)
T cd06655          97 YLAGGSLTDVVTE  109 (296)
T ss_pred             ecCCCcHHHHHHh
Confidence            9999998887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.39  E-value=6.6e-12  Score=79.26  Aligned_cols=89  Identities=13%  Similarity=0.061  Sum_probs=71.5

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC----hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS----LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.||.|+|| .||++.. .++..+|+|.+......    ......+.+|+.+++.++|+|++.+.+.+...+..+++
T Consensus         3 ~~~~~ig~g~~~-~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           3 TKGEVLGKGAYG-TVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             cccceEeccCCe-EEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            456789999999 9999875 46788999988532211    12235578899999999999999998888888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +||+++++|.+.+..
T Consensus        81 ~e~~~~~~L~~~l~~   95 (265)
T cd06631          81 MEFVPGGSISSILNR   95 (265)
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999888754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.39  E-value=6.6e-12  Score=79.41  Aligned_cols=92  Identities=13%  Similarity=0.024  Sum_probs=73.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC---hhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS---LVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~   89 (112)
                      ++...+.||+|+|| .||++.+..++..+++|.+......   ......+.+|+.+++.++|+|++.+.+.+..  ...+
T Consensus         3 ~~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           3 NWRRGKLLGQGAFG-RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CccccceecCCCCE-EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            45566789999999 9999998888999999988533211   1234567889999999999999988776543  4668


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      ++++||+++++|.+++..
T Consensus        82 ~l~~e~~~~~~L~~~l~~   99 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA   99 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999888754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.38  E-value=2.1e-12  Score=84.07  Aligned_cols=89  Identities=13%  Similarity=0.007  Sum_probs=69.7

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ..+.||+|+|| .||++.+..++..||+|.+..... .....+.+..|..++..+. |++++.+...+...+.+|+||||
T Consensus         4 ~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey   82 (323)
T cd05615           4 FLMVLGKGSFG-KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY   82 (323)
T ss_pred             EEEEEEecCCe-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence            44689999999 999999998999999999864321 1223455677888888886 46666777777777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus        83 ~~~g~L~~~i~~   94 (323)
T cd05615          83 VNGGDLMYHIQQ   94 (323)
T ss_pred             CCCCcHHHHHHH
Confidence            999999887754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.38  E-value=4e-12  Score=81.30  Aligned_cols=89  Identities=18%  Similarity=0.063  Sum_probs=71.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .||++.+..++..+|+|.+..... ......+.+|+.+++.++|+|++.+.+.+...+..|+||||
T Consensus         7 y~~~~~lg~g~~~-~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           7 YKKLDKLGEGSYA-TVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             eeEEEEEeecCCe-EEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            4566789999999 999999888889999999853221 11223456899999999999999999888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+ +|.+.+..
T Consensus        85 ~~~-~L~~~~~~   95 (291)
T cd07844          85 LDT-DLKQYMDD   95 (291)
T ss_pred             CCC-CHHHHHHh
Confidence            986 67776643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.38  E-value=4.6e-12  Score=79.21  Aligned_cols=92  Identities=17%  Similarity=0.126  Sum_probs=76.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||.|++| .+|++.+..++..+++|.+............+..|+++++.++|+|++.+.+.+......++++||
T Consensus         2 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           2 YEIIKQIGKGSFG-KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             ceEEeeeccCCCe-EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            3456789999999 999999988899999999864433334456788999999999999999888777777889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~l~~~   93 (258)
T cd08215          81 ADGGDLSQKIKKQ   93 (258)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999998888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0199|consensus

Probab=99.38  E-value=5.8e-13  Score=92.77  Aligned_cols=88  Identities=18%  Similarity=0.055  Sum_probs=72.4

Q ss_pred             hcccccccCCcceEEEEEEcC-CCC--CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-RDG--RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-~~~--~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.||+|+|| .|+++... .+|  ..||||++..+... .....|++|+.+|-+|+|+|++.+++...+ ..+.+|+
T Consensus       113 ~l~e~LG~GsFg-vV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~  189 (1039)
T KOG0199|consen  113 KLYELLGEGSFG-VVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF  189 (1039)
T ss_pred             HHHHHhcCccee-eEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence            466789999999 99988643 233  45999999644322 245789999999999999999999998887 5578999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      |+++.|+|+|+|++
T Consensus       190 ELaplGSLldrLrk  203 (1039)
T KOG0199|consen  190 ELAPLGSLLDRLRK  203 (1039)
T ss_pred             hhcccchHHHHHhh
Confidence            99999999999987

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.38  E-value=5.1e-12  Score=80.95  Aligned_cols=90  Identities=17%  Similarity=0.112  Sum_probs=72.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|.+| .||++.+..+++.+++|.+............+.+|+.+++.++|+|++.+.+.+...+..|+||||
T Consensus         4 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (294)
T PLN00009          4 YEKVEKIGEGTYG-VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY   82 (294)
T ss_pred             eEEEEEecCCCCE-EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence            3456789999999 999999888899999998854322222235677899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++ ++.+.+..
T Consensus        83 ~~~-~l~~~~~~   93 (294)
T PLN00009         83 LDL-DLKKHMDS   93 (294)
T ss_pred             ccc-cHHHHHHh
Confidence            975 67766643

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.38  E-value=6.5e-12  Score=80.37  Aligned_cols=91  Identities=15%  Similarity=0.025  Sum_probs=71.5

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++...     ..+..+|+|.+... ........+.+|+.+++.++|+|++.+.+.+...+..
T Consensus         7 ~~~i~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           7 KITLLRELGQGSFG-MVYEGNARDIIKGEAETRVAVKTVNES-ASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HceeeeeecCCCCc-EEEEEEEeccCCCCcceEEEEEECCCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            34667899999999 99998643     23457999987532 2222344677899999999999999988877777789


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+.+++|.++++.
T Consensus        85 ~lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          85 LVVMELMAHGDLKSYLRS  102 (288)
T ss_pred             EEEEeCCCCCCHHHHHHH
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.38  E-value=4.9e-12  Score=79.33  Aligned_cols=89  Identities=21%  Similarity=0.159  Sum_probs=73.0

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccC---ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ---SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      ..+.||+|++| .||++....++..+++|.+.....   .....+.+.+|+.+++.++|+|++.+.+.+......|+++|
T Consensus         4 ~~~~ig~g~~~-~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (258)
T cd06632           4 KGELLGSGSFG-SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE   82 (258)
T ss_pred             ccceeeecCCc-eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence            44679999999 999999887889999998853221   12234678899999999999999998888777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        83 ~~~~~~L~~~~~~   95 (258)
T cd06632          83 LVPGGSLAKLLKK   95 (258)
T ss_pred             ecCCCcHHHHHHh
Confidence            9999998887754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.38  E-value=5.1e-12  Score=79.18  Aligned_cols=87  Identities=17%  Similarity=0.088  Sum_probs=72.9

Q ss_pred             cccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.||+|+|| .||++.....   +..+++|.+...... .....+.+|+..+..++|+|++.+.+.+.....++++|||+
T Consensus         1 ~~ig~g~~g-~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFG-EVYKGKLKGKDGKTTEVAVKTLKEDASE-EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCce-EEEEEEEecCCCCCceEEeEeeccccch-hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            368999999 9999988755   788999998644322 23567889999999999999999988888888899999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      ++++|.+++...
T Consensus        79 ~~~~L~~~l~~~   90 (262)
T cd00192          79 EGGDLLDYLRKS   90 (262)
T ss_pred             cCCcHHHHHhhc
Confidence            999999988654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=4.4e-12  Score=79.77  Aligned_cols=90  Identities=14%  Similarity=0.060  Sum_probs=75.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .+|.+....++..+++|.+....  ....+.+.+|+.+++.++|||++.+.+.+...+.+|++|||
T Consensus         5 ~~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           5 YELIQRIGSGTYG-DVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             eEEEEEecCCCce-EEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            4456789999999 99999988888899999885322  22456788999999999999999988877777889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+.+...
T Consensus        82 ~~~~~l~~~~~~~   94 (262)
T cd06613          82 CGGGSLQDIYQVT   94 (262)
T ss_pred             CCCCcHHHHHHhh
Confidence            9999988877654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.38  E-value=7.4e-12  Score=78.74  Aligned_cols=89  Identities=22%  Similarity=0.063  Sum_probs=75.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|++| .+|++.+..+++.+++|.+..... ......+..|+..+..++|+|++.+.+.+...+..++++||+
T Consensus         4 ~~~~~i~~g~~~-~v~~~~~~~~~~~~~vk~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           4 ERVKVLGQGSSG-VVYKVRHKPTGKIYALKKIHVDGD-EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             eeeeeeeecCCe-EEEEEEEcCCCcEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            456789999999 999999988899999998864322 234567889999999999999999988888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+.+..
T Consensus        82 ~~~~L~~~l~~   92 (264)
T cd06623          82 DGGSLADLLKK   92 (264)
T ss_pred             CCCcHHHHHHH
Confidence            99999888754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.38  E-value=4.1e-12  Score=82.85  Aligned_cols=91  Identities=13%  Similarity=0.015  Sum_probs=71.7

Q ss_pred             hhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|+|| .||++...   .++..+|+|.+.....  .......+..|+.++..+. |+|++.+...+...+.+
T Consensus         2 y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           2 FELLKVLGTGAYG-KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             ceEEEEEeecCCE-EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4466789999999 99987653   4678899998853211  1122355778999999995 99999988888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+.+++|.+++..
T Consensus        81 ~lv~e~~~~g~L~~~l~~   98 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ   98 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999988864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.37  E-value=7.1e-12  Score=79.73  Aligned_cols=91  Identities=16%  Similarity=0.091  Sum_probs=73.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|++| .||++....     +...+++|.+... ........+..|+.+++.++|+|++.+.+.+...+..
T Consensus         7 ~~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           7 SITLLRALGHGAFG-EVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HcEeeeECCCCCCC-cEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            44667889999999 999998765     6678999987532 2222335678899999999999999988877777778


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+.+++|.+.+..
T Consensus        85 ~lv~e~~~g~~L~~~i~~  102 (277)
T cd05036          85 FILLELMAGGDLKSFLRE  102 (277)
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999888754

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.37  E-value=5.6e-12  Score=80.26  Aligned_cols=91  Identities=11%  Similarity=-0.004  Sum_probs=72.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.....+     ..+++|.+... ........+.+|+.++..++|||++.+.+.+......
T Consensus         6 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           6 AVRFLEELGEGAFG-KVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             HcchhhcccCccCC-cEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            34567889999999 99998765443     57999988532 2223345688999999999999999988887777789


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        84 ~~~~e~~~~~~L~~~l~~  101 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVR  101 (283)
T ss_pred             EEEEecCCCCcHHHHHHh
Confidence            999999999999988864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.37  E-value=5e-12  Score=81.16  Aligned_cols=90  Identities=12%  Similarity=0.053  Sum_probs=70.9

Q ss_pred             hhcccccccCCcceEEEEEEcC----------------CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEee
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP----------------RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSIT   79 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~----------------~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~   79 (112)
                      +.+.+.||+|+|| .||.+...                .+...+|+|.+... ........+.+|+.++..++|+|++.+
T Consensus         7 ~~~~~~lg~G~~g-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           7 LTFKEKLGEGQFG-EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             ceeeeeccCCCCC-eEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4667789999999 99987432                23346899988532 222334678899999999999999998


Q ss_pred             eccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         80 QHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        80 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+.+...+..+++|||+.+++|.+++..
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSR  112 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHh
Confidence            8888777789999999999999888754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.37  E-value=4.6e-12  Score=79.85  Aligned_cols=89  Identities=16%  Similarity=0.098  Sum_probs=74.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|++| .||++.+..+++.+++|.+.... .......+.+|+.+++.+.|+|++.+.+.+...+..++++||+
T Consensus         4 ~~~~~ig~g~~~-~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           4 EYLGELGAGNSG-VVSKVLHRPTGKIMAVKTIRLEI-NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             hHHHHhcCCCCe-EEEEEEEcCCCcEEEEEEEeccc-ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            345689999999 99999998899999999886432 2234467889999999999999998888777778899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .+++|.+.+..
T Consensus        82 ~~~~L~~~~~~   92 (265)
T cd06605          82 DGGSLDKILKE   92 (265)
T ss_pred             CCCcHHHHHHH
Confidence            99998887754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.37  E-value=9.3e-12  Score=79.13  Aligned_cols=91  Identities=15%  Similarity=0.039  Sum_probs=72.2

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+...||+|+|| .||.+...     .++..+|+|.+... ........+.+|+.+++.++|+|++.+.+.+......
T Consensus         7 ~~~~~~~ig~G~~g-~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   84 (277)
T cd05062           7 KITMSRELGQGSFG-MVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   84 (277)
T ss_pred             HceeeeeeccccCC-eEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence            34667789999999 99987643     23467999988532 2223345688999999999999999998888877889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        85 ~lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          85 LVIMELMTRGDLKSYLRS  102 (277)
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999888764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.37  E-value=8.7e-12  Score=78.46  Aligned_cols=88  Identities=14%  Similarity=0.044  Sum_probs=70.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||.+... ++..+++|.+....   .....+.+|+.+++.++|+|++.+.+.+...+..|++|||
T Consensus         6 ~~~~~~lg~G~~~-~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           6 LTFLKELGSGQFG-VVHLGKWR-GKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             cchhhhhccCCCc-eEEEeEec-CCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            3466789999999 99998765 45679999875321   1234577899999999999999988877777889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~l~~~   93 (256)
T cd05059          81 MANGCLLNYLRER   93 (256)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999988653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.37  E-value=8.2e-12  Score=78.62  Aligned_cols=85  Identities=15%  Similarity=0.036  Sum_probs=67.5

Q ss_pred             ccccCCcceEEEEEE--cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVT--DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~--~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++.  ...++..+|+|.+..........+.+..|+.++..+.|+|++.+.+.+.. +..+++|||+++
T Consensus         2 ~lg~G~~g-~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFG-TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCc-ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence            58999999 999985  34567889999886443333445678899999999999999988876544 457899999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+++..
T Consensus        80 ~~L~~~l~~   88 (257)
T cd05116          80 GPLNKFLQK   88 (257)
T ss_pred             CcHHHHHHh
Confidence            999888754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.36  E-value=8.5e-12  Score=78.20  Aligned_cols=87  Identities=13%  Similarity=0.080  Sum_probs=74.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .+|.+....++..+++|.+...    ...+.+.+|+.+++.++|+|++.+.+.+......|+++||
T Consensus         5 y~~~~~i~~g~~~-~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           5 FDILEKLGEGSYG-SVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             chhhhhhcCCCCe-EEEEEEEcCCCcEEEEEEeecH----HHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            4556789999999 9999998888899999988532    1256788999999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+++|.+.+..
T Consensus        80 ~~~~~L~~~l~~   91 (256)
T cd06612          80 CGAGSVSDIMKI   91 (256)
T ss_pred             CCCCcHHHHHHh
Confidence            999999888754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.36  E-value=7e-12  Score=79.80  Aligned_cols=89  Identities=15%  Similarity=0.095  Sum_probs=71.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +...+.||.|++| .+|++.+..++..+|+|.+..... ......+.+|+.+++.++|+|++.+.+.+...+..+++|||
T Consensus         2 y~~~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           2 FKQLEKLGEGTYA-TVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             ceEeeeeccCCce-EEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            3456789999999 999999988899999999864321 22234567899999999999999999888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++ ++.+.+..
T Consensus        80 ~~~-~l~~~~~~   90 (284)
T cd07836          80 MDK-DLKKYMDT   90 (284)
T ss_pred             CCc-cHHHHHHh
Confidence            986 67776643

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=9.6e-12  Score=77.76  Aligned_cols=90  Identities=19%  Similarity=0.114  Sum_probs=75.2

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|++| .+|++.+..+++.+++|.+............+.+|+.++.++.|+|++.+...+...+..++++||+
T Consensus         3 ~~~~~l~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           3 QLGDLIGRGAFG-VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             eeeeEEcccCCe-EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            456789999999 9999998888899999998654332234567889999999999999998888777778899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+.+..
T Consensus        82 ~~~~L~~~~~~   92 (254)
T cd06627          82 ENGSLRQIIKK   92 (254)
T ss_pred             CCCcHHHHHHh
Confidence            99999887754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.36  E-value=2.9e-12  Score=85.56  Aligned_cols=83  Identities=12%  Similarity=-0.073  Sum_probs=69.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|....        ..+.+|+.+++.++||||+.+.+.+......++++|
T Consensus        93 ~y~~~~~lg~G~~g-~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         93 GFSILETFTPGAEG-FAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             CcEEEEEEcCCCCe-EEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            45677899999999 999999999999999996531        345789999999999999999887777788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      ++.+ +|++++..
T Consensus       164 ~~~~-~L~~~l~~  175 (391)
T PHA03212        164 RYKT-DLYCYLAA  175 (391)
T ss_pred             cCCC-CHHHHHHh
Confidence            9974 67777654

>KOG0667|consensus

Probab=99.36  E-value=3.5e-12  Score=87.43  Aligned_cols=88  Identities=16%  Similarity=0.107  Sum_probs=74.0

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC------CCCeEeeeccCCCCCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK------HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~~~~   90 (112)
                      .+.++||+|+|| .|.+|.+.++++.||+|.+++.   ..-....+.|+.+|..++      .-|+|++.+.+...+++|
T Consensus       189 ~V~e~LGkGtFG-QVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  189 EVLEVLGKGSFG-QVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEecccccc-eeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            677899999999 9999999999999999999632   233445567898888887      368899999999999999


Q ss_pred             EEEeccCCcchhhhhhhcC
Q psy16893         91 PGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~~  109 (112)
                      ||+|.+.. .|.++++.+.
T Consensus       265 iVfELL~~-NLYellK~n~  282 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNK  282 (586)
T ss_pred             eeehhhhh-hHHHHHHhcC
Confidence            99999987 6999998754

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.36  E-value=5.1e-12  Score=79.15  Aligned_cols=91  Identities=16%  Similarity=0.069  Sum_probs=74.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .+|++....++..+++|.+............+..|+.+++.++|+|++.+.+.+......|+++||
T Consensus         2 y~~~~~i~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           2 FKVLKKLGKGSYG-SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             ceEeeeecCCCce-eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            3456789999999 999998888899999999864332333445678899999999999999988877777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+++..
T Consensus        81 ~~~~~L~~~~~~   92 (256)
T cd08530          81 APFGDLSKAISK   92 (256)
T ss_pred             cCCCCHHHHHHH
Confidence            999998877654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.36  E-value=1.2e-11  Score=77.90  Aligned_cols=89  Identities=13%  Similarity=0.059  Sum_probs=72.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++... .+..+++|.+....   .....+.+|+.+++.++|+|++.+.+.+......+++||
T Consensus         7 ~~~i~~~ig~g~~~-~v~~~~~~-~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           7 SLKLERKLGAGQFG-EVWMGTWN-GTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             heeeeeeeccCcce-EEEEEEEc-CCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            34566789999999 99998865 45779999885322   234568889999999999999999888777778999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        82 ~~~~~~L~~~i~~~   95 (261)
T cd05034          82 YMSKGSLLDFLKSG   95 (261)
T ss_pred             ccCCCCHHHHHhcc
Confidence            99999999888654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.36  E-value=9.9e-12  Score=78.32  Aligned_cols=87  Identities=13%  Similarity=0.023  Sum_probs=69.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++... .+..+|+|.+....   .....+.+|+.+++.++|+|++.+.+... .+..+++|||
T Consensus         8 ~~~~~~ig~G~~g-~v~~~~~~-~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           8 LKLVKKLGAGQFG-EVWMGYYN-GHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             ceeeeeeccCccc-eEEeeecC-CCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            4567889999999 99998854 56789999885322   22356788999999999999998877654 4568999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (260)
T cd05067          82 MENGSLVDFLKTP   94 (260)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999987653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.36  E-value=1.1e-11  Score=77.87  Aligned_cols=87  Identities=14%  Similarity=0.091  Sum_probs=72.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|.|| .||.+...  ++.+|+|.+....   ...+.+.+|+.+++.++|+|++.+.+.+...+..+++|||
T Consensus         8 ~~~~~~ig~g~~g-~v~~~~~~--~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           8 LKLGATIGKGEFG-DVMLGDYR--GQKVAVKCLKDDS---TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             ccceeeeecCCCc-eEEEEEec--CcEEEEEEeccch---hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            3556789999999 99998764  7789999986332   2456788999999999999999988877777789999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+.+...
T Consensus        82 ~~~~~L~~~~~~~   94 (256)
T cd05039          82 MAKGSLVDYLRSR   94 (256)
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999887643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.35  E-value=1.1e-11  Score=78.16  Aligned_cols=88  Identities=15%  Similarity=0.064  Sum_probs=70.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||.+.... +..+|+|.+....   .....+.+|+.++..++|||++.+.+.+.....++++|||
T Consensus         6 ~~~~~~lg~G~~~-~vy~~~~~~-~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05113           6 LTFLKELGTGQFG-VVKYGKWRG-QYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY   80 (256)
T ss_pred             eEEeeEecCcccc-eEEEEEecC-CCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence            3566789999999 999987543 4459999885322   2235678899999999999999998888777788999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+.+...
T Consensus        81 ~~~~~l~~~i~~~   93 (256)
T cd05113          81 MSNGCLLNYLREH   93 (256)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999998888653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.35  E-value=1.2e-11  Score=78.80  Aligned_cols=88  Identities=17%  Similarity=0.115  Sum_probs=69.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccC-----CCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTP-----YTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~-----~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..+++|.+...   ......+.+|+.++..+ +|+|++.+.+.+     ...+.
T Consensus        19 ~~~~~~~lg~g~~~-~vy~~~~~~~~~~~~ik~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          19 TWEIIETIGKGTYG-KVFKVLNKKNGSKAAVKILDPI---HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             ceeeeeeeccCCCc-EEEEEEECCCCceeEEEeeccc---cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            45677899999999 9999998888999999987432   12234567788999998 599999877754     23466


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .+++|||+++++|.+.+.
T Consensus        95 ~~lv~e~~~~~~L~~~l~  112 (286)
T cd06638          95 LWLVLELCNGGSVTDLVK  112 (286)
T ss_pred             EEEEEeecCCCCHHHHHH
Confidence            899999999999887654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=1.2e-11  Score=78.44  Aligned_cols=90  Identities=16%  Similarity=0.055  Sum_probs=72.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC---CCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK---HDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv   92 (112)
                      +...+.||+|+|| .+|++.+..++..+++|.+.... .......+.+|+.+++.+.   |+|++.+.+.+......|++
T Consensus         3 y~~~~~l~~g~~g-~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           3 YQRLELIGRGAYG-AVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhheeccCCc-eEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            3455789999999 99999988889999999885332 2233456778998888886   99999988877777889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+.+..
T Consensus        81 ~e~~~~~~L~~~~~~   95 (277)
T cd06917          81 MEYAEGGSVRTLMKA   95 (277)
T ss_pred             EecCCCCcHHHHHHc
Confidence            999999998887643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.35  E-value=9.2e-12  Score=79.67  Aligned_cols=90  Identities=17%  Similarity=0.070  Sum_probs=71.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||.+.+..++..+++|.+..... ......+.+|+.++..++|+|++.+.+.+...+..|+++|
T Consensus         6 ~y~~~~~ig~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           6 SYLNLEKLGEGSYA-TVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             eeEEEEEEEecCCE-EEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            34567789999999 999999888899999999853221 2223456789999999999999998888878788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ ++++.+..
T Consensus        84 ~~~~-~l~~~~~~   95 (291)
T cd07870          84 YMHT-DLAQYMIQ   95 (291)
T ss_pred             cccC-CHHHHHHh
Confidence            9974 56665543

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.35  E-value=1e-11  Score=80.14  Aligned_cols=92  Identities=13%  Similarity=0.061  Sum_probs=72.5

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||.+..     ..++..+|+|.+... ......+.+.+|+.+++++ +|+|++.+.+.+...+.
T Consensus        36 ~~~~~~~ig~G~~g-~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          36 NLSFGKTLGAGAFG-KVVEATAYGLSKSDAVMKVAVKMLKPT-AHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HeEEcceeeccCCe-eEEEEEEecCCCCCceeEEEEEecCcc-CChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            34567789999999 9998863     234557999988532 2233346788999999999 79999998888777788


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .|++|||+.+++|.+.++..
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~  133 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRK  133 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhC
Confidence            99999999999999888653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.35  E-value=1.4e-11  Score=78.11  Aligned_cols=91  Identities=15%  Similarity=0.024  Sum_probs=72.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++....     ++..+|+|.+... ........+.+|+.++..+.|+|++.+.+.+......
T Consensus         7 ~~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           7 KITLIRELGQGSFG-MVYEGLAKGVVKGEPETRVAIKTVNEN-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             HeeEEeEecCCCCc-eEEEEEEeccCCCCcceeEEEEecCCc-cCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            34566789999999 999987653     3367999988532 2223345678899999999999999999888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        85 ~~v~e~~~~~~L~~~l~~  102 (277)
T cd05032          85 LVVMELMAKGDLKSYLRS  102 (277)
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.35  E-value=1.3e-11  Score=78.23  Aligned_cols=86  Identities=19%  Similarity=0.180  Sum_probs=69.0

Q ss_pred             cccccCCcceEEEEEEcCCCCC--eEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGR--RVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~--~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.||+|+|| .||++....++.  .+++|.+... ......+.+.+|+.++.++ .|||++.+.+.+...+..|++|||+
T Consensus         1 ~~lg~g~~g-~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFG-QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCc-eEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            368999999 999998776665  4688877522 2233346788899999999 6999999888887777899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+++..
T Consensus        79 ~~~~L~~~i~~   89 (270)
T cd05047          79 PHGNLLDFLRK   89 (270)
T ss_pred             CCCcHHHHHHh
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.35  E-value=1.7e-11  Score=76.61  Aligned_cols=90  Identities=19%  Similarity=0.094  Sum_probs=74.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--CceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e   94 (112)
                      ...+.||+|++| .+|.+....++..+++|.+..........+.+.+|+.++++++|+|++.+.+.....  ...++++|
T Consensus         3 ~~~~~i~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           3 TRGELLGRGSFG-SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             eeeeEeeecCce-EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            345689999999 999999888899999999864332233456788999999999999999888777665  78999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        82 ~~~~~~L~~~~~~   94 (260)
T cd06606          82 YVSGGSLSSLLKK   94 (260)
T ss_pred             ecCCCcHHHHHHH
Confidence            9999999887754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.35  E-value=1.2e-11  Score=78.66  Aligned_cols=92  Identities=14%  Similarity=0.003  Sum_probs=72.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      +.+.+.||+|+|| .||++....++.    .+|+|.+.... .......+.+|+.++..+.|+|++.+.+.+.. ...++
T Consensus         9 ~~~~~~ig~g~~g-~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           9 LEKIKVLGSGAFG-TVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             cEEcceecCCCCc-cEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            3566789999999 999998655543    58999875332 23344678899999999999999988877666 66899


Q ss_pred             EEeccCCcchhhhhhhcCC
Q psy16893         92 GLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~~  110 (112)
                      ++||+++++|.+.+....+
T Consensus        86 v~e~~~~g~L~~~l~~~~~  104 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKD  104 (279)
T ss_pred             EEecCCCCcHHHHHHhccC
Confidence            9999999999998876443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.35  E-value=2.1e-11  Score=78.69  Aligned_cols=92  Identities=13%  Similarity=0.052  Sum_probs=72.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||.+....       ....+|+|.+... ........+..|+.++..+ +|+|++.+.+.+...
T Consensus        19 ~~~i~~~lg~G~~g-~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          19 RLVLGKPLGEGCFG-QVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             HeEEeeeeccCCCe-eEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            45788899999999 999886432       2346999988532 2233345678899999999 699999998888887


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +..|++|||+++++|.+++...
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            8899999999999999988653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.35  E-value=2.1e-11  Score=79.15  Aligned_cols=90  Identities=21%  Similarity=0.124  Sum_probs=72.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +...+.||+|+|| .+|++.+..++..+++|.+..... .......+..|+.+++.++|+|++.+.+.+...+..|++||
T Consensus        27 f~~~~~lg~G~~~-~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          27 FTDLREIGHGSFG-AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhheeccCCCe-EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            3456689999999 999999888899999998864322 22334568889999999999999999888888788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ ++.+.+..
T Consensus       106 ~~~g-~l~~~~~~  117 (317)
T cd06635         106 YCLG-SASDLLEV  117 (317)
T ss_pred             CCCC-CHHHHHHH
Confidence            9986 56666543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.34  E-value=5.1e-12  Score=92.21  Aligned_cols=81  Identities=10%  Similarity=0.001  Sum_probs=67.4

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ...||+|+|| .||++....++..||+|.+.....      ....|++.+++++|||||.+.+.+...+..|+||||+++
T Consensus       695 ~~~ig~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~  767 (968)
T PLN00113        695 ENVISRGKKG-ASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEG  767 (968)
T ss_pred             ccEEccCCCe-eEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence            3579999999 999999888899999998853211      112457889999999999999988887889999999999


Q ss_pred             cchhhhhh
Q psy16893         99 EVHVRRWT  106 (112)
Q Consensus        99 ~~l~~~~~  106 (112)
                      |+|.+.++
T Consensus       768 g~L~~~l~  775 (968)
T PLN00113        768 KNLSEVLR  775 (968)
T ss_pred             CcHHHHHh
Confidence            99988774

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.34  E-value=7.4e-12  Score=82.05  Aligned_cols=91  Identities=16%  Similarity=0.025  Sum_probs=70.8

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~   87 (112)
                      .+.+.+.||+|+|| .||.+...     .+++.||+|.+... ......+.+..|+.++.++ +|+||+.+.+.+.. ..
T Consensus         8 ~~~i~~~lG~G~fg-~Vy~a~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           8 RLKLGKPLGRGAFG-KVIQASAFGIEKSASCRTVAVKMLKEG-ATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HhhhhcccccCcCc-eEEeccccccccccccceeeeeeccCC-CCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            35677899999999 99998643     34578999988632 2233345678899999999 79999988776544 56


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+++++||+++++|.+.+..
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHh
Confidence            78999999999999988864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.34  E-value=8.9e-12  Score=78.56  Aligned_cols=88  Identities=13%  Similarity=0.010  Sum_probs=71.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .||++... .+..+|+|.+....   ...+.+.+|+.+++.++|+|++.+...+...+..|++|||
T Consensus         8 ~~~~~~lg~g~~~-~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           8 IQLLRKLGAGQFG-EVWEGLWN-NTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             eeeEEEecccCCc-cEEEEEec-CCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            3566789999999 99998864 45679999885322   2245678899999999999999888877777889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+++...
T Consensus        83 ~~~~~L~~~~~~~   95 (261)
T cd05068          83 MKYGSLLEYLQGG   95 (261)
T ss_pred             ccCCcHHHHHhcc
Confidence            9999999888653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.34  E-value=2e-11  Score=79.67  Aligned_cols=92  Identities=13%  Similarity=0.034  Sum_probs=72.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||.+.+..       ....+|+|.+... ......+.+.+|+.++.++ +|+||+.+.+.+...
T Consensus        13 ~~~i~~~ig~G~~g-~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          13 RLTLGKPLGEGCFG-QVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HeeecceeccccCC-cEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            45677899999999 999987532       1236899987532 2223356788999999999 799999998888887


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+++++||+++++|.+++...
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            8899999999999999888653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.34  E-value=7.8e-12  Score=79.24  Aligned_cols=92  Identities=16%  Similarity=0.039  Sum_probs=75.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.+.||+|++| .||++....+++.+++|.+..... .......+..|+.++..+. |+|++.+.+.+...+..+++|
T Consensus         3 y~~~~~lg~g~~~-~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           3 FKFGKIIGEGSFS-TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             ceEeeeecCCCce-EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            4566789999999 999999888899999998854222 1222356788999999998 999999988888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      |++.+++|.+.+...
T Consensus        82 e~~~~~~L~~~l~~~   96 (280)
T cd05581          82 EYAPNGELLQYIRKY   96 (280)
T ss_pred             cCCCCCcHHHHHHHc
Confidence            999999998887643

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.34  E-value=1.3e-11  Score=78.83  Aligned_cols=90  Identities=16%  Similarity=0.010  Sum_probs=72.3

Q ss_pred             hhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      +.+...||+|+|| .||++...     .++..+|+|.+.... .......+.+|+.+++++.|+|++.+.+.+...+..+
T Consensus         7 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           7 IEYVRDIGQGAFG-RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             ceecccccccccc-cEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            4566789999999 99998753     256789999885322 2233456888999999999999999888877777899


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +++||+++++|.+.+..
T Consensus        85 lv~e~~~~~~L~~~l~~  101 (288)
T cd05050          85 LLFEYMAYGDLNEFLRH  101 (288)
T ss_pred             EEEecCCCCCHHHHHHH
Confidence            99999999999888864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.34  E-value=1.4e-11  Score=78.83  Aligned_cols=86  Identities=15%  Similarity=0.011  Sum_probs=69.2

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEEEec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPGLTL   95 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~   95 (112)
                      ..+.||.|++| .||.+.+..++..+|+|.+.... .......+.+|+.+++.++|+||+.+.+.+..  ...+|++|||
T Consensus         5 ~~~~lg~g~~~-~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   82 (287)
T cd06621           5 ELSRLGEGAGG-SVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY   82 (287)
T ss_pred             EEEEeccCCce-EEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence            45689999999 99999998889999999885332 22334668899999999999999988775533  4568999999


Q ss_pred             cCCcchhhhh
Q psy16893         96 RLGEVHVRRW  105 (112)
Q Consensus        96 ~~~~~l~~~~  105 (112)
                      +++++|.+.+
T Consensus        83 ~~~~~L~~~l   92 (287)
T cd06621          83 CEGGSLDSIY   92 (287)
T ss_pred             cCCCCHHHHH
Confidence            9999987654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.34  E-value=1.6e-11  Score=78.82  Aligned_cols=91  Identities=18%  Similarity=0.088  Sum_probs=69.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC-------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR-------   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------   87 (112)
                      .+.+.+.||+|+|| .||++....++..+++|.+............+.+|+.+++.++|||++.+.+.+....       
T Consensus         8 ~~~~~~~lg~g~~g-~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864           8 KFDIIGQIGEGTYG-QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             hhheeeeecccCCE-EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence            45667889999999 9999999888999999998643222222345678999999999999998877665433       


Q ss_pred             ---ceEEEEeccCCcchhhhhhh
Q psy16893         88 ---RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ---~~~lv~e~~~~~~l~~~~~~  107 (112)
                         .+++++||+++ .+.+.+..
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~~  108 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLES  108 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHhc
Confidence               78999999987 55555543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.34  E-value=9.6e-12  Score=78.13  Aligned_cols=86  Identities=20%  Similarity=0.086  Sum_probs=69.1

Q ss_pred             cccccCCcceEEEEEEcCC-CC--CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPR-DG--RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~-~~--~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.||+|++| .||++.... .+  ..+|+|.+...... ...+.+.+|+.++++++|+|++.+.+.+.. ...++++||+
T Consensus         1 ~~ig~g~~~-~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFG-VVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcc-cEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            368999999 999987644 23  35899998643322 445778899999999999999988877666 7789999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      ++++|.+.+...
T Consensus        78 ~~~~L~~~l~~~   89 (257)
T cd05040          78 PLGSLLDRLRKD   89 (257)
T ss_pred             CCCcHHHHHHhc
Confidence            999999988654

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.34  E-value=1.7e-11  Score=77.57  Aligned_cols=88  Identities=15%  Similarity=-0.015  Sum_probs=67.3

Q ss_pred             cccccccCCcceEEEEEEcCCCCC--eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCce
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGR--RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRRM   89 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~--~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~   89 (112)
                      +.+.||+|+|| .||++.....+.  .+|+|.+..........+.+..|+.+++.++|+|++.+.+.+..      ....
T Consensus         3 i~~~ig~G~~g-~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           3 LGKTLGEGEFG-SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccccCcccCc-eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            45689999999 999998766654  58999886443334445778889999999999999987664321      2346


Q ss_pred             EEEEeccCCcchhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~  106 (112)
                      ++++||+.+++|.+++.
T Consensus        82 ~~v~e~~~~~~l~~~~~   98 (272)
T cd05075          82 VVILPFMKHGDLHSFLL   98 (272)
T ss_pred             EEEEEeCCCCcHHHHHH
Confidence            89999999999877764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.33  E-value=1.9e-11  Score=76.74  Aligned_cols=89  Identities=12%  Similarity=0.048  Sum_probs=71.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|+|| .||++... .+..+++|.+....   .....+.+|+++++.+.|||++.+.+.+......++++||+
T Consensus         7 ~~~~~ig~g~~g-~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           7 TLVQEIGSGQFG-LVWLGYWL-EKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             EEEeeecCcccc-eEEEEEEe-CCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            445789999999 99998765 45679999885322   22346788999999999999999888777777889999999


Q ss_pred             CCcchhhhhhhcCC
Q psy16893         97 LGEVHVRRWTKDQG  110 (112)
Q Consensus        97 ~~~~l~~~~~~~~~  110 (112)
                      .+++|.+++....+
T Consensus        82 ~~~~L~~~~~~~~~   95 (256)
T cd05112          82 EHGCLSDYLRAQRG   95 (256)
T ss_pred             CCCcHHHHHHhCcc
Confidence            99999888865444

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.33  E-value=2e-11  Score=78.20  Aligned_cols=91  Identities=13%  Similarity=-0.018  Sum_probs=72.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC----------------CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG----------------RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSI   78 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~----------------~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~   78 (112)
                      .+.+.+.||+|+|| .||++.....+                ..+|+|.+.... .......+.+|+.++..++|+|++.
T Consensus         6 ~~~~~~~lg~G~~g-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           6 PLNFVEKLGEGQFG-EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hCcccccccCCCCc-cEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            34567899999999 99998765432                458999885332 2234567889999999999999999


Q ss_pred             eeccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         79 TQHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        79 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +.+.+...+..++++||+.+++|.+++..
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQK  112 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHh
Confidence            88887777889999999999999888754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.33  E-value=1.4e-11  Score=77.16  Aligned_cols=88  Identities=15%  Similarity=0.053  Sum_probs=72.8

Q ss_pred             cccccccCCcceEEEEEEcCCCC----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.||.|+|| .||++.....+    ..+|+|.+... ......+.+..|+.++..++|+|++.+...+...+..+++|
T Consensus         3 ~~~~lg~g~~g-~v~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        3 LGKKLGEGAFG-EVYKGTLKGLSGEKEVEVAVKTLKED-ADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             ccceeccCCCc-ceEEEEecCCCCCCCceEEEEEccCC-CChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            45689999999 99999887655    88999998533 22224567889999999999999999988888778899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        81 e~~~~~~l~~~~~~   94 (258)
T smart00219       81 EYMEGGDLLDYLRK   94 (258)
T ss_pred             eccCCCCHHHHHHh
Confidence            99999999888764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.33  E-value=1.1e-11  Score=81.79  Aligned_cols=89  Identities=24%  Similarity=0.187  Sum_probs=69.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..........+.+.+|+.+++.++|+|++.+.+.+..      ...
T Consensus        25 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~  103 (364)
T cd07875          25 RYQNLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  103 (364)
T ss_pred             ceeEEEEeecCCCe-EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence            44667889999999 99999998899999999986543334445678889999999999999977664432      345


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      +|+||||+.++ +.+.+
T Consensus       104 ~~lv~e~~~~~-l~~~~  119 (364)
T cd07875         104 VYIVMELMDAN-LCQVI  119 (364)
T ss_pred             EEEEEeCCCCC-HHHHH
Confidence            79999999874 55544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.33  E-value=2e-11  Score=76.76  Aligned_cols=86  Identities=16%  Similarity=0.063  Sum_probs=67.3

Q ss_pred             cccccCCcceEEEEEEcCCCC---CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~---~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.||+|+|| .||++.....+   ..+++|.+..... ....+.+.+|+.+++.+.|+|++.+.+.+.. +..+++|||+
T Consensus         1 ~~ig~G~~g-~v~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFG-SVVKGVYLMKSGKEVEVAVKTLKQEHI-AAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA   77 (257)
T ss_pred             CccCccCce-eEEEeEeeccCCCcceEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC
Confidence            368999999 99998754443   6799999864322 2334668889999999999999988876554 4579999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      ++++|.+.+...
T Consensus        78 ~~~~L~~~l~~~   89 (257)
T cd05060          78 PLGPLLKYLKKR   89 (257)
T ss_pred             CCCcHHHHHHhC
Confidence            999999888653

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=8.4e-12  Score=81.36  Aligned_cols=85  Identities=15%  Similarity=0.039  Sum_probs=65.8

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhC---CCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFF---KHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ||+|+|| .||++.+..++..+|+|.+.... ...........|..++...   .|||++.+...+...+.+|++|||+.
T Consensus         1 lG~G~~g-~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~   79 (330)
T cd05586           1 IGKGTFG-QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS   79 (330)
T ss_pred             CCCCCce-EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence            6899999 99999999899999999985321 1112223345566666554   59999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        80 ~g~L~~~l~~   89 (330)
T cd05586          80 GGELFWHLQK   89 (330)
T ss_pred             CChHHHHHHh
Confidence            9999887754

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.33  E-value=1.7e-11  Score=80.37  Aligned_cols=90  Identities=29%  Similarity=0.302  Sum_probs=69.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+............+.+|+.+++.++|+||+.+.+.+...      ..
T Consensus        16 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          16 RYRDLKQVGSGAYG-TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             ceEEEEEeeecCCe-EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence            34567889999999 999999888899999998854333333345678999999999999999877755442      24


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .+++|||+ ++++.+.+.
T Consensus        95 ~~lv~e~~-~~~l~~~~~  111 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMK  111 (343)
T ss_pred             EEEEEecC-CCCHHHHHh
Confidence            58999998 556666554

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.33  E-value=1.2e-11  Score=78.80  Aligned_cols=89  Identities=17%  Similarity=0.110  Sum_probs=71.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|.+| .||++.+..++..+++|.+............+.+|+.+++.++|+|++.+.+.+...+..|+++||+
T Consensus         2 ~~~~~l~~g~~~-~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           2 QKVEKIGEGTYG-VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             chheEecCCCCe-EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            345689999999 9999998888999999988643222223356778999999999999999888888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      + ++|.+.+..
T Consensus        81 ~-~~l~~~~~~   90 (283)
T cd07835          81 D-LDLKKYMDS   90 (283)
T ss_pred             C-cCHHHHHhh
Confidence            6 477777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.33  E-value=1.8e-11  Score=79.86  Aligned_cols=91  Identities=26%  Similarity=0.278  Sum_probs=70.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~   93 (112)
                      .+.+.+.||.|+|| .||++.+..++..+|+|.+..........+.+..|+.++..++|||++.+.+.+.. ....|+++
T Consensus        11 ~y~~~~~ig~g~~g-~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~   89 (328)
T cd07856          11 RYVDLQPVGMGAFG-LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVT   89 (328)
T ss_pred             ceEEEEeecccCCe-EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEe
Confidence            34567899999999 99999988899999999885432222334667789999999999999988876644 56789999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+ +|.+.++.
T Consensus        90 e~~~~-~L~~~~~~  102 (328)
T cd07856          90 ELLGT-DLHRLLTS  102 (328)
T ss_pred             ehhcc-CHHHHHhc
Confidence            99854 66665543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.33  E-value=1.6e-11  Score=77.97  Aligned_cols=91  Identities=14%  Similarity=0.095  Sum_probs=71.3

Q ss_pred             hhcccccccCCcceEEEEEEcC----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~   89 (112)
                      +.+.+.||+|+|| .||++...    .++..+|+|.+...... ...+.+.+|+.+++.+.|+|++.+.+.+..  ....
T Consensus         6 ~~~~~~ig~g~~~-~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           6 LKFIKQLGEGHFG-KVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             chhheeeccCCCe-eEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            3455789999999 99998743    34778999998643221 235678899999999999999988776655  5578


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      +++|||+++++|.+++...
T Consensus        84 ~lv~e~~~~~~l~~~l~~~  102 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH  102 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC
Confidence            9999999999998888653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.33  E-value=2.6e-11  Score=76.46  Aligned_cols=85  Identities=14%  Similarity=0.087  Sum_probs=66.1

Q ss_pred             ccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++...  ..+..+|+|.+... ......+.+.+|+.++++++|+|++.+.+.+.. +..+++|||+++
T Consensus         2 ~ig~G~~g-~v~~~~~~~~~~~~~vavk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFG-CVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcc-cEEEEEEecCCCceeEEEEEcccc-cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence            48999999 99988643  34556999988533 222334668899999999999999988876654 467999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      ++|.+.+...
T Consensus        79 ~~L~~~l~~~   88 (257)
T cd05115          79 GPLNKFLSGK   88 (257)
T ss_pred             CCHHHHHHhC
Confidence            9999888643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.33  E-value=1.7e-11  Score=78.41  Aligned_cols=90  Identities=16%  Similarity=0.069  Sum_probs=72.4

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||.+..     ..++..+++|.+...  .......+.+|+.++..++|+|++.+.+.+...+..
T Consensus         6 ~~~~~~~lg~G~~~-~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           6 NIVLKRELGEGAFG-KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             HeeeccccCCcCCe-eEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            45677889999999 9998864     234456899988532  233356788999999999999999998888887889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      ++++||+++++|.+++..
T Consensus        83 ~lv~e~~~~~~L~~~i~~  100 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRA  100 (288)
T ss_pred             EEEEEcCCCCCHHHHHHH
Confidence            999999999999888864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.33  E-value=2e-11  Score=78.83  Aligned_cols=90  Identities=20%  Similarity=0.124  Sum_probs=71.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+...+.||+|+|| .||.+....+++.+++|.+.... ......+.+.+|+.+++.++|||++.+.+.+...+..|+++
T Consensus        16 ~y~~~~~lg~g~~g-~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          16 LFTDLREIGHGSFG-AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhheeecCCCCe-EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            35566789999999 99999988889999999885332 22233466889999999999999999988888878899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+.+ ++.+.+.
T Consensus        95 e~~~g-~l~~~~~  106 (307)
T cd06607          95 EYCLG-SASDILE  106 (307)
T ss_pred             HhhCC-CHHHHHH
Confidence            99986 4555543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.32  E-value=1.3e-11  Score=79.45  Aligned_cols=92  Identities=13%  Similarity=0.068  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEcC-------CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-------RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-------~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||.+...       ..+..+++|.+... ......+.+.+|+.++..+ .|+|++.+.+.+...
T Consensus        16 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          16 KLTLGKPLGEGCFG-QVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HeeecceeeccCCc-eEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            55677899999999 99988632       23457999988532 2233456788999999999 799999988887777


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ...|++|||+.+++|.+++...
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            8899999999999998888654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.32  E-value=2e-11  Score=77.42  Aligned_cols=91  Identities=15%  Similarity=-0.042  Sum_probs=71.6

Q ss_pred             hhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      +...+.||.|+|| .||++....     ....+++|.+.... .......+.+|+.++..++|+|++.+.+.+...+..|
T Consensus         7 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           7 LQEITTLGRGEFG-EVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             ceeeeeeccccee-EEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            3456789999999 999998543     34568999874321 1223467889999999999999999988888777889


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+++++|.+.+...
T Consensus        85 lv~e~~~~~~L~~~i~~~  102 (275)
T cd05046          85 MILEYTDLGDLKQFLRAT  102 (275)
T ss_pred             EEEEecCCCcHHHHHHhc
Confidence            999999999998887643

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.32  E-value=2.2e-11  Score=77.98  Aligned_cols=89  Identities=15%  Similarity=0.020  Sum_probs=70.1

Q ss_pred             hcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||+|+|| .||++....     ....+++|.+... ........+.+|+.+++.+.||||+.+.+.+...+..++
T Consensus         3 ~~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           3 VLGKTLGEGEFG-KVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             cccccccCcCCc-ceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            456789999999 999987542     2346888887532 222334678899999999999999998887777778899


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ++||+.+++|.+.+..
T Consensus        81 v~e~~~~~~L~~~l~~   96 (290)
T cd05045          81 IVEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEEecCCCCHHHHHHh
Confidence            9999999999887754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.32  E-value=1.5e-11  Score=78.76  Aligned_cols=91  Identities=16%  Similarity=0.092  Sum_probs=70.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--CceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   92 (112)
                      .+.+.+.||+|.|| .||++.+..++..+++|.+............+.+|+.++..+.|||++.+.+.+...  +..|++
T Consensus         6 ~y~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           6 EYEKLNRIEEGTYG-VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhcCCCCe-EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            45666789999999 999999988899999999864322222234567899999999999999887766554  789999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +||+.+ +|.+.+..
T Consensus        85 ~e~~~~-~L~~~~~~   98 (293)
T cd07843          85 MEYVEH-DLKSLMET   98 (293)
T ss_pred             ehhcCc-CHHHHHHh
Confidence            999985 67666543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.32  E-value=1.7e-11  Score=81.11  Aligned_cols=83  Identities=11%  Similarity=-0.087  Sum_probs=63.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-CCCeEEEEEcccccC---ChhhHHHHHHHHHHHhhCCCCCeEe-eeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-DGRRVALKKLPNVFQ---SLVSSKRVFRELKMLCFFKHDNVSI-TQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-~~~~va~k~i~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~   89 (112)
                      .|.+.+.||+|+|| .||++.+.. +++.+|+|.+.....   .......+.+|+++|..++|+|++. +...    +..
T Consensus        19 ~Y~~~~~IG~G~fg-~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~   93 (365)
T PRK09188         19 RFVETAVLKRDVFS-TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKD   93 (365)
T ss_pred             CceEccEEeecCcE-EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCc
Confidence            56778899999999 999998765 677789998642211   1223456889999999999999983 4432    347


Q ss_pred             EEEEeccCCcchh
Q psy16893         90 YPGLTLRLGEVHV  102 (112)
Q Consensus        90 ~lv~e~~~~~~l~  102 (112)
                      |++|||++|++|.
T Consensus        94 ~LVmE~~~G~~L~  106 (365)
T PRK09188         94 GLVRGWTEGVPLH  106 (365)
T ss_pred             EEEEEccCCCCHH
Confidence            9999999998875

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.32  E-value=1.3e-11  Score=80.80  Aligned_cols=90  Identities=30%  Similarity=0.289  Sum_probs=68.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+..........+.+.+|+.+++.++|+||+.+.+.+..      ...
T Consensus        16 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07878          16 RYQNLTPVGSGAYG-SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE   94 (343)
T ss_pred             hhhhheecccCCCe-EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence            45667899999999 99999998899999999986433222334567789999999999999977665432      345


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .|++++++ +++|.+.++
T Consensus        95 ~~~~~~~~-~~~l~~~~~  111 (343)
T cd07878          95 VYLVTNLM-GADLNNIVK  111 (343)
T ss_pred             EEEEeecC-CCCHHHHHh
Confidence            79999988 456666554

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=2e-11  Score=77.17  Aligned_cols=91  Identities=14%  Similarity=0.104  Sum_probs=72.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc---CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF---QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~   90 (112)
                      +.+.+.||+|+|| .||++.+..++..+++|.+....   ........+.+|+.+++.++|+|++.+.+.+..  ...++
T Consensus         4 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           4 WRLGKLLGRGAFG-EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             eeeeeeEccCCCe-EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            4556789999999 99999988889999999874321   112334678899999999999999987775543  35688


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +++||+++++|.+.+..
T Consensus        83 ~v~e~~~~~~L~~~~~~   99 (264)
T cd06653          83 IFVEYMPGGSIKDQLKA   99 (264)
T ss_pred             EEEEeCCCCcHHHHHHH
Confidence            99999999999888754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.32  E-value=1.7e-11  Score=79.50  Aligned_cols=91  Identities=14%  Similarity=0.003  Sum_probs=70.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++....++.    .+|+|.+... ......+.+..|+.+++.+.|+||+.+.+.+... ..+
T Consensus         8 ~f~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   84 (316)
T cd05108           8 EFKKIKVLGSGAFG-TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   84 (316)
T ss_pred             hceeeeeeecCCCc-eEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence            34566789999999 999997655544    3899988532 2233456788899999999999999888876654 468


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++|+++|+|.+.+...
T Consensus        85 ~v~e~~~~g~l~~~l~~~  102 (316)
T cd05108          85 LITQLMPFGCLLDYVREH  102 (316)
T ss_pred             eeeecCCCCCHHHHHHhc
Confidence            999999999999988754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.32  E-value=1.6e-11  Score=77.54  Aligned_cols=87  Identities=14%  Similarity=0.047  Sum_probs=68.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+ ..+++|.+.....   ....+.+|+.++..++|+|++.+.+.... +..|++|||
T Consensus         8 ~~~~~~lg~g~~~-~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~   81 (262)
T cd05071           8 LRLEVKLGQGCFG-EVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY   81 (262)
T ss_pred             eeEeeecCCCCCC-cEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence            5677789999999 9999977655 4599998863221   23467889999999999999987775544 457999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (262)
T cd05071          82 MSKGSLLDFLKGE   94 (262)
T ss_pred             CCCCcHHHHHhhc
Confidence            9999998888653

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.31  E-value=2.3e-11  Score=77.86  Aligned_cols=90  Identities=13%  Similarity=0.039  Sum_probs=71.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCC-----CCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD-----GRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~-----~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|+|| .||++.....     ...+|+|.+... ........+.+|+.++..+ +|+|++.+.+.+.....+
T Consensus        14 ~~~~~~ig~g~~g-~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          14 LTLGKPLGEGAFG-QVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             eEEeeEecccccc-cEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            4566789999999 9999876433     367999988633 2233345688899999999 799999998888887889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        92 ~li~e~~~~~~L~~~l~~  109 (293)
T cd05053          92 YVVVEYAAHGNLRDFLRA  109 (293)
T ss_pred             EEEEEeCCCCcHHHHHHh
Confidence            999999999999988854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.31  E-value=1.1e-11  Score=79.60  Aligned_cols=87  Identities=18%  Similarity=0.167  Sum_probs=72.0

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .....||+|+|| .||++.+..++..+|+|.+...  .......+.+|+.+++.++|+|++.+.+.+...+..|++|||+
T Consensus        25 ~~~~~lg~g~~g-~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          25 DSFIKIGEGSTG-IVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             hhhhcccCCCCe-EEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            334579999999 9999988888999999988532  2233456889999999999999998888777778899999999


Q ss_pred             CCcchhhhhh
Q psy16893         97 LGEVHVRRWT  106 (112)
Q Consensus        97 ~~~~l~~~~~  106 (112)
                      ++++|.+++.
T Consensus       102 ~~~~L~~~~~  111 (292)
T cd06658         102 EGGALTDIVT  111 (292)
T ss_pred             CCCcHHHHHh
Confidence            9998887664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.31  E-value=3.1e-11  Score=78.16  Aligned_cols=92  Identities=12%  Similarity=0.042  Sum_probs=72.0

Q ss_pred             hhhcccccccCCcceEEEEEEcC-------CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-------RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-------~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++...       .....+|+|.+... ........+..|+.+++.+ .|+|++.+.+.+...
T Consensus        13 ~~~~~~~lg~G~~g-~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          13 RLVLGKPLGEGCFG-QVVRAEAYGIDKSRPDQTVTVAVKMLKDN-ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HeeeeeeecCCCcc-cEEEeeecccCCccCCcceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            44677899999999 99998642       23446899987532 2233345678899999999 599999998888777


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+|++|||+++++|.+++...
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            7899999999999999888653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.31  E-value=9.8e-12  Score=81.78  Aligned_cols=89  Identities=24%  Similarity=0.203  Sum_probs=69.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+............+.+|+.+++.++|+||+.+.+.+..      ...
T Consensus        18 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   96 (355)
T cd07874          18 RYQNLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD   96 (355)
T ss_pred             ceeEEEEeeecCCE-EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence            44667899999999 99999988889999999986544334445677889999999999999977665432      345


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      +|++|||+.++ +.+.+
T Consensus        97 ~~lv~e~~~~~-l~~~~  112 (355)
T cd07874          97 VYLVMELMDAN-LCQVI  112 (355)
T ss_pred             eEEEhhhhccc-HHHHH
Confidence            79999999874 55544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.31  E-value=2.5e-11  Score=76.91  Aligned_cols=85  Identities=12%  Similarity=-0.062  Sum_probs=65.8

Q ss_pred             ccccCCcceEEEEEEcCC--CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTDPR--DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~--~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++....  ....+++|.+... ........+.+|+.+++.++|||++.+.+.+......|++|||+++
T Consensus         2 ~lg~G~~g-~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           2 EIGNGWFG-KVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             cCCCCcCc-eEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence            58999999 999886332  2334667766422 2223346788999999999999999988888887889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+++..
T Consensus        80 ~~L~~~l~~   88 (268)
T cd05086          80 GDLKSYLSQ   88 (268)
T ss_pred             CcHHHHHHh
Confidence            999888764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.31  E-value=2.4e-11  Score=79.26  Aligned_cols=91  Identities=18%  Similarity=0.067  Sum_probs=71.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh------------hHHHHHHHHHHHhhCCCCCeEeeecc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV------------SSKRVFRELKMLCFFKHDNVSITQHT   82 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~------------~~~~~~~e~~~l~~l~h~niv~~~~~   82 (112)
                      +..+.+.||+|+|| .||++.+..+++.+|+|.+........            ....+.+|+.+++.++|+|++.+.+.
T Consensus        10 y~~~~~~ig~G~~g-~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024         10 YIQKGAHLGEGTYG-KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             hhhhhhcccCCCce-eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            34566789999999 999999888899999998853221110            01246789999999999999998888


Q ss_pred             CCCCCceEEEEeccCCcchhhhhhh
Q psy16893         83 PYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        83 ~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +...+..+++|||+.+ +|.+.+..
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~l~~  112 (335)
T PTZ00024         89 YVEGDFINLVMDIMAS-DLKKVVDR  112 (335)
T ss_pred             EecCCcEEEEEecccc-CHHHHHHh
Confidence            8888889999999985 67777643

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.31  E-value=2.2e-11  Score=77.39  Aligned_cols=89  Identities=17%  Similarity=0.102  Sum_probs=71.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--CceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e   94 (112)
                      .+.+.||+|++| .||++....++..+++|.+............+.+|+.+++.+.|+|++.+.+.+...  ...++++|
T Consensus         2 ~~~~~l~~g~~~-~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           2 EKIAQIGEGTYG-QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             eeeEEeccCCCe-EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            355689999999 999999888889999999964332233345678899999999999999888877665  78999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++ ++.+.+..
T Consensus        81 ~~~~-~l~~~~~~   92 (287)
T cd07840          81 YMDH-DLTGLLDS   92 (287)
T ss_pred             cccc-cHHHHHhc
Confidence            9986 67666643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.30  E-value=2.4e-12  Score=81.11  Aligned_cols=86  Identities=13%  Similarity=0.029  Sum_probs=66.6

Q ss_pred             cccccCCcceEEEEEEcCCCCC-------eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGR-------RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~-------~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.||+|+|| .||++.....+.       .+++|.+...  .....+.+..|+.+++.+.|||++.+.+.+......+++
T Consensus         1 ~~lg~G~~~-~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFT-KIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccch-hheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            468999999 999988654432       3777766321  123345678899999999999999888877776778999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      |||+.+|+|.+.+...
T Consensus        78 ~e~~~~g~L~~~l~~~   93 (258)
T cd05078          78 QEYVKFGSLDTYLKKN   93 (258)
T ss_pred             EecCCCCcHHHHHhcC
Confidence            9999999998888654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.30  E-value=1.1e-11  Score=78.38  Aligned_cols=85  Identities=19%  Similarity=0.090  Sum_probs=68.2

Q ss_pred             ccccCCcceEEEEEEcCCCC------CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         21 EVGLLSICSSVKAVTDPRDG------RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~------~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .||+|+|| .||.+......      ..+++|.+.... .......+.+|+.+++.++||||+.+.+.+...+..+++||
T Consensus         2 ~lg~g~~g-~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (269)
T cd05044           2 FLGSGAFG-EVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME   79 (269)
T ss_pred             ccccccce-eEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence            58999999 99998765333      678999875321 12334568889999999999999999888888788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        80 ~~~~~~L~~~l~~   92 (269)
T cd05044          80 LMEGGDLLSYLRD   92 (269)
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999988854

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.30  E-value=3.1e-11  Score=76.95  Aligned_cols=89  Identities=13%  Similarity=0.013  Sum_probs=68.3

Q ss_pred             hcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~   90 (112)
                      ...+.||+|+|| .||.+.    ...++..+|+|.+... ........+.+|+.+++.++|||++.+.+.+..  ...++
T Consensus         7 ~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (283)
T cd05080           7 KKIRVLGEGHFG-KVSLYCYDPANDGTGEMVAVKTLKRE-CGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ   84 (283)
T ss_pred             eeceecccCCCc-EEEEeeEccccCCCCceEEEEEeccc-cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence            566789999999 997653    3346778999988533 222334567889999999999999988775443  45689


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+++++|.+++..
T Consensus        85 lv~e~~~~~~l~~~~~~  101 (283)
T cd05080          85 LIMEYVPLGSLRDYLPK  101 (283)
T ss_pred             EEecCCCCCCHHHHHHH
Confidence            99999999999887754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0584|consensus

Probab=99.30  E-value=3.2e-12  Score=87.56  Aligned_cols=90  Identities=18%  Similarity=0.113  Sum_probs=76.0

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccc--cCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNV--FQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      +...+||+|+|- .||++.+..+|..||+-.+...  ...+...+++..|+++|+.|+|+||+.++..|.+  ...+-+|
T Consensus        43 k~~evLGrGafK-tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   43 KFDEVLGRGAFK-TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             ehhhhcccccce-eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            566789999999 9999999999999999877532  3445567899999999999999999999888776  4458899


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +|++..|+|..+.+.
T Consensus       122 TEL~TSGtLr~Y~kk  136 (632)
T KOG0584|consen  122 TELFTSGTLREYRKK  136 (632)
T ss_pred             eecccCCcHHHHHHH
Confidence            999999999887754

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.30  E-value=2.2e-11  Score=78.29  Aligned_cols=84  Identities=19%  Similarity=0.160  Sum_probs=70.5

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ..||+|+|| .||++....++..+|+|.+...  .......+.+|+.+++.++|+|++.+.+.+...+..+++|||++++
T Consensus        26 ~~lg~g~~g-~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          26 IKIGEGSTG-IVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHcCCCCCe-EEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            478999999 9999988888999999987422  2233456888999999999999998888887888899999999999


Q ss_pred             chhhhhh
Q psy16893        100 VHVRRWT  106 (112)
Q Consensus       100 ~l~~~~~  106 (112)
                      +|.+.+.
T Consensus       103 ~L~~~~~  109 (292)
T cd06657         103 ALTDIVT  109 (292)
T ss_pred             cHHHHHh
Confidence            8877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.30  E-value=5.3e-11  Score=75.80  Aligned_cols=89  Identities=12%  Similarity=0.047  Sum_probs=70.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCC------CCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPY------TTR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~------~~~   87 (112)
                      .+.+.+.||.|+|| .||++.+..+++.+|+|.+...   ......+..|+.++.++ .|+|++.+.+.+.      ..+
T Consensus        17 ~~~~~~~lg~g~~~-~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          17 IFELVEVVGNGTYG-QVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhheeeccCCCe-EEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            44566789999999 9999999888999999987432   22334577888888888 5999998777653      245


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..|++|||+.+++|.+.+..
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~  112 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKN  112 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHH
Confidence            78999999999999887764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.30  E-value=3.1e-11  Score=77.64  Aligned_cols=91  Identities=19%  Similarity=0.092  Sum_probs=68.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--------   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------   86 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+..............+|+.++++++|||++.+.+.+...        
T Consensus        13 ~y~~~~~lg~g~~~-~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          13 KYEKLAKIGQGTFG-EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             heEEEEEeecCCCE-EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            55677899999999 999999988999999998853322222234566899999999999999777654332        


Q ss_pred             CceEEEEeccCCcchhhhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...+++|||+.+ ++.+.+..
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~  111 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSN  111 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHh
Confidence            346999999986 56665543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.30  E-value=1.8e-11  Score=76.88  Aligned_cols=85  Identities=12%  Similarity=0.006  Sum_probs=70.2

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||.|+|| .+|.+.+..+++.+++|.+..... .......+.+|+.++..+.|+|++.+.+.+......|+++||+.+++
T Consensus         1 lg~g~~~-~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYG-RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCce-EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence            5889999 999999988899999998854321 12234668889999999999999998887777888999999999999


Q ss_pred             hhhhhhh
Q psy16893        101 HVRRWTK  107 (112)
Q Consensus       101 l~~~~~~  107 (112)
                      |.+.+..
T Consensus        80 L~~~l~~   86 (265)
T cd05579          80 LASLLEN   86 (265)
T ss_pred             HHHHHHH
Confidence            8877754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.30  E-value=3.2e-11  Score=76.34  Aligned_cols=87  Identities=13%  Similarity=0.079  Sum_probs=68.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC------CCce
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT------TRRM   89 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~   89 (112)
                      .+.+.||+|+|| .||.+....++..+|+|.+....   .....+.+|+.++..+ .|+|++.+.+.+..      ...+
T Consensus         9 ~~~~~lg~g~~g-~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           9 ELVELVGNGTYG-QVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hHHHheeecCCe-EEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            445689999999 99999988889999999885321   2235677899988888 59999977765532      2468


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+.+++|.+.+..
T Consensus        85 ~iv~e~~~~~~L~~~l~~  102 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKN  102 (272)
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999888765

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.29  E-value=1.9e-11  Score=78.28  Aligned_cols=90  Identities=14%  Similarity=0.079  Sum_probs=68.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCc-----e
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRR-----M   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~-----~   89 (112)
                      +.+.+.||+|+|| .||++.+..++..||+|.+............+.+|+.+++.+. |+|++.+.+.+...+.     .
T Consensus         3 y~~~~~lg~g~~g-~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           3 YEKLEKIGEGTYG-KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             ceEeeEecccCCe-EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            3456789999999 9999999889999999988543222223356788999999996 6999987776554333     7


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+++ ++.+.+..
T Consensus        82 ~lv~e~~~~-~l~~~~~~   98 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDS   98 (295)
T ss_pred             EEEeeccCc-CHHHHHHH
Confidence            999999997 67776653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.29  E-value=2.1e-11  Score=78.48  Aligned_cols=86  Identities=16%  Similarity=0.149  Sum_probs=70.7

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ...||+|+|| .||++.+..++..+|+|.+....  ......+.+|+.++..+.|||++.+.+.+...+..|+++||+++
T Consensus        26 ~~~ig~g~~g-~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          26 YIKIGEGSTG-IVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             hhhcCCCCce-eEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            3478999999 99999988889999999985321  22345678899999999999999988888778889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus       103 ~~L~~~~~~  111 (297)
T cd06659         103 GALTDIVSQ  111 (297)
T ss_pred             CCHHHHHhh
Confidence            988776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.29  E-value=1.7e-11  Score=80.09  Aligned_cols=91  Identities=27%  Similarity=0.356  Sum_probs=70.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC----CCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY----TTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~   90 (112)
                      .+.+.+.||+|++| .||++....++..+++|.+............+.+|+.+++.++|+|++.+.+.+.    ....+|
T Consensus         6 ~y~~~~~lg~g~~g-~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           6 RYKPIENIGSGAYG-VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             ceeeeeeeecCCCe-EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            44566789999999 9999999889999999998643333334566788999999999999998766543    345689


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +++||+.+ +|.+.+..
T Consensus        85 lv~e~~~~-~l~~~~~~  100 (334)
T cd07855          85 VVMDLMES-DLHHIIHS  100 (334)
T ss_pred             EEEehhhh-hHHHHhcc
Confidence            99999975 67776643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.29  E-value=5.3e-11  Score=75.29  Aligned_cols=90  Identities=17%  Similarity=0.142  Sum_probs=69.5

Q ss_pred             hhcccccccCCcceEEEEEEcCC-CCCeEEEEEccccc--------CChhhHHHHHHHHHHHhh-CCCCCeEeeeccCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPR-DGRRVALKKLPNVF--------QSLVSSKRVFRELKMLCF-FKHDNVSITQHTPYT   85 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~-~~~~va~k~i~~~~--------~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~   85 (112)
                      +.+.+.||+|+|| .||.+.... ++..+|+|.+....        ........+.+|+.++.+ ++|+|++.+...+..
T Consensus         2 y~~~~~ig~G~~~-~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           2 YAVLEHLGSGAFG-CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             chhhhhhcCCCCc-eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4556789999999 999998776 67889999875321        111223456778887764 689999999888888


Q ss_pred             CCceEEEEeccCCcchhhhhh
Q psy16893         86 TRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        86 ~~~~~lv~e~~~~~~l~~~~~  106 (112)
                      .+..+++|||+++++|.+.+.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~  101 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFN  101 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHH
Confidence            888999999999999887663

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.29  E-value=3.9e-11  Score=75.68  Aligned_cols=87  Identities=14%  Similarity=0.101  Sum_probs=69.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++... .+..+++|.+...   ......+.+|+.+++.++|+|++.+.+.... ...+++|||
T Consensus         8 ~~~~~~lg~g~~~-~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           8 LKLEKKLGAGQFG-EVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             eeEEeEecCccce-EEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            4667789999999 99998754 4456999987532   2234567889999999999999988776665 668999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +++++|.+++.+.
T Consensus        82 ~~~~~L~~~~~~~   94 (260)
T cd05073          82 MAKGSLLDFLKSD   94 (260)
T ss_pred             CCCCcHHHHHHhC
Confidence            9999999988653

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.29  E-value=3.5e-11  Score=76.53  Aligned_cols=87  Identities=11%  Similarity=0.121  Sum_probs=65.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHH-HhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKM-LCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      .+.+.||+|+|| .||++.+..++..||+|.+....... ....+..|+.. ++...|+|++.+.+.+...+.+|+++||
T Consensus         4 ~~~~~ig~g~~g-~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           4 EVIEELGRGAYG-VVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             eEEEEecccCCe-EEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            455789999999 99999999899999999986432222 22345556654 6667899999988888777789999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +++ +|.+.+.
T Consensus        82 ~~~-~l~~~l~   91 (283)
T cd06617          82 MDT-SLDKFYK   91 (283)
T ss_pred             hcc-cHHHHHH
Confidence            985 5555443

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=4.6e-11  Score=76.27  Aligned_cols=90  Identities=18%  Similarity=0.128  Sum_probs=75.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.....+++|.+| .+|.+.+..++..+++|.+.....   ..+.+..|+.+++.++|+|++.+.+.+......|+++|
T Consensus        20 ~~~~~~~l~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          20 LYKNLEKIGEGASG-EVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             cchHhHhccCCCCe-EEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            44556789999999 999999888889999999853221   34567889999999999999998887777788999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        96 ~~~~~~L~~~l~~~  109 (286)
T cd06614          96 YMDGGSLTDIITQN  109 (286)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999888653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.29  E-value=3.3e-11  Score=76.53  Aligned_cols=88  Identities=20%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.+.||+|++| .+|++.+..+++.+++|.+............+.+|+.+++.++|+|++.+.+.+......++++||++
T Consensus         3 ~~~~i~~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           3 KLGKIGEGTYG-VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             cceeeecCCCc-eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            45689999999 99999988889999999986433222334567889999999999999999888888888999999998


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      + ++.+.+..
T Consensus        82 ~-~l~~~l~~   90 (283)
T cd05118          82 T-DLYKLIKD   90 (283)
T ss_pred             C-CHHHHHHh
Confidence            6 67777654

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.29  E-value=2.2e-11  Score=78.64  Aligned_cols=90  Identities=16%  Similarity=0.065  Sum_probs=68.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+..............+|+.+++.++|+|++.+.+.+..  .+.++++
T Consensus         8 ~y~~~~~ig~g~~~-~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845           8 EFEKLNRIGEGTYG-IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             ceeEeeeeeecCCE-EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence            45667789999999 99999998899999999885332222222345679999999999999988776543  3568999


Q ss_pred             EeccCCcchhhhhh
Q psy16893         93 LTLRLGEVHVRRWT  106 (112)
Q Consensus        93 ~e~~~~~~l~~~~~  106 (112)
                      |||+.+ +|.+.+.
T Consensus        87 ~e~~~~-~l~~~l~   99 (309)
T cd07845          87 MEYCEQ-DLASLLD   99 (309)
T ss_pred             EecCCC-CHHHHHH
Confidence            999986 5655554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.28  E-value=2.6e-11  Score=77.98  Aligned_cols=90  Identities=20%  Similarity=0.183  Sum_probs=71.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCC--eEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGR--RVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~--~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++....++.  .+++|.+.. .......+.+.+|+.++.++ .|||++.+.+.+......|++
T Consensus         4 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           4 IKFEDVIGEGNFG-QVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ceeeeeecCCCcc-eEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            3566789999999 999998766554  468887742 22233356788899999999 699999988887777789999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      +||+++++|.+++..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (297)
T cd05089          82 IEYAPYGNLLDFLRK   96 (297)
T ss_pred             EEecCCCcHHHHHHh
Confidence            999999999988864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.28  E-value=4e-11  Score=76.52  Aligned_cols=90  Identities=19%  Similarity=0.070  Sum_probs=64.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC---CCCCeEeeeccCCC-----CC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF---KHDNVSITQHTPYT-----TR   87 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~   87 (112)
                      |.+.+.||+|+|| .||++.+..+++.+|+|.+..............+|+.++..+   .|+||+.+.+.+..     ..
T Consensus         2 y~~~~~lg~g~~g-~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           2 YEPVAEIGVGAYG-TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             ceEeeEEeecCCe-EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            3456789999999 999999999999999998864322222223445666666554   69999988765432     34


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+++++||+.+ ++.+.+..
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~   99 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDK   99 (288)
T ss_pred             eEEEEEccccc-CHHHHHHh
Confidence            58999999986 67766643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.28  E-value=3.2e-11  Score=77.13  Aligned_cols=92  Identities=13%  Similarity=0.035  Sum_probs=71.9

Q ss_pred             hhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|+|| .||.+...   .++..+|+|.+.....  .....+.+.+|+.++..+. |+||+.+...+......
T Consensus         2 y~~~~~lg~G~~g-~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           2 FELLKVLGTGAYG-KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             ceeeeeeccCCcc-eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            3456789999999 99988753   4678899998853221  1123456778999999994 99999988877777889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |+++||+++++|.+++...
T Consensus        81 ~lv~e~~~~~~L~~~l~~~   99 (290)
T cd05613          81 HLILDYINGGELFTHLSQR   99 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc
Confidence            9999999999999988653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.28  E-value=3e-11  Score=79.00  Aligned_cols=91  Identities=21%  Similarity=0.236  Sum_probs=70.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~   89 (112)
                      .+.+.+.||+|+|| .||.+.+..++..||+|.+..............+|+.+++.++|+|++.+.+.+..     ...+
T Consensus         6 ~y~~~~~lg~G~~~-~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           6 KYVPIKPIGRGAYG-IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             ceeEEEEeccCCCe-EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            35667789999999 99999998899999999986433223334567789999999999999987765543     2458


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+++||+.+ +|.+.+..
T Consensus        85 ~lv~e~~~~-~L~~~~~~  101 (337)
T cd07858          85 YIVYELMDT-DLHQIIRS  101 (337)
T ss_pred             EEEEeCCCC-CHHHHHhc
Confidence            999999974 67766643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.27  E-value=2.2e-11  Score=76.50  Aligned_cols=85  Identities=9%  Similarity=-0.049  Sum_probs=65.9

Q ss_pred             cccccCCcceEEEEEEcCCCC----------CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         20 DEVGLLSICSSVKAVTDPRDG----------RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~----------~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      +.||+|+|| .||++....++          ..+++|.+....   .....+.+|+.+++.++|+|++.+.+.+.. ...
T Consensus         1 ~~lg~G~~~-~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFT-NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             Ccccccccc-eEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            368999999 99999876555          347777664221   114677889999999999999988876665 567


Q ss_pred             EEEEeccCCcchhhhhhhcC
Q psy16893         90 YPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~~  109 (112)
                      ++++||+.+++|.+++....
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREK   95 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhc
Confidence            99999999999998886543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.27  E-value=5.3e-11  Score=76.25  Aligned_cols=90  Identities=16%  Similarity=0.073  Sum_probs=71.5

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||.+...     .+...+++|.+...  .....+.+.+|+.++..++|+|++.+.+.+...+..
T Consensus         6 ~~~~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (291)
T cd05094           6 DIVLKRELGEGAFG-KVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL   82 (291)
T ss_pred             HeEEeeeecccCCC-eEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence            34566789999999 99988643     34456888887422  223345688999999999999999998888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus        83 ~lv~e~~~~~~L~~~i~~  100 (291)
T cd05094          83 IMVFEYMKHGDLNKFLRA  100 (291)
T ss_pred             EEEEecCCCCcHHHHHHh
Confidence            999999999999988854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG2052|consensus

Probab=99.27  E-value=9.4e-12  Score=82.73  Aligned_cols=83  Identities=13%  Similarity=0.118  Sum_probs=63.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHh--hCCCCCeEeeeccCCC----CCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLC--FFKHDNVSITQHTPYT----TRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~~~~~~~~----~~~~~   90 (112)
                      .+.+.||+|.|| .||++..+  |+.||||.+..     .+...+.+|.++..  .++|+||+.+.+....    ..++|
T Consensus       214 ~L~e~IGkGRyG-EVwrG~wr--Ge~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  214 VLQEIIGKGRFG-EVWRGRWR--GEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             EEEEEecCcccc-ceeecccc--CCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            466789999999 99999876  78899998742     22245667777766  4579999976554332    34689


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ||.+|-+.|+|+|+|..
T Consensus       286 LvTdYHe~GSL~DyL~r  302 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNR  302 (513)
T ss_pred             EeeecccCCcHHHHHhh
Confidence            99999999999999964

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.26  E-value=5.4e-11  Score=75.59  Aligned_cols=89  Identities=16%  Similarity=0.147  Sum_probs=68.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCC--CceEEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTT--RRMYPGL   93 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~   93 (112)
                      .+.+.||+|+|| .||++.+..++..+|+|.+...... .......+|+.++.++. |+|++.+.+.+.+.  +.+++++
T Consensus         2 ~~~~~lg~g~~~-~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           2 KILGKIGEGTFS-EVLKAQSRKTGKYYAIKCMKKHFKS-LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             ceEeeccccccc-eEEEEEEcCCCcEEEEEEehhccCC-chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            356789999999 9999998888999999988643222 22233457888888886 99999888877665  7899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+.+ ++++.+...
T Consensus        80 e~~~~-~l~~~l~~~   93 (282)
T cd07831          80 ELMDM-NLYELIKGR   93 (282)
T ss_pred             ecCCc-cHHHHHHhc
Confidence            99985 778777653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.26  E-value=3.2e-11  Score=75.36  Aligned_cols=86  Identities=19%  Similarity=0.150  Sum_probs=70.9

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      ||+|+|| .+|.+....+++.+++|.+..... .......+..|+.+++.++|+|++.+...+......+++|||+++++
T Consensus         1 lg~G~~~-~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFG-KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCce-EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            6899999 999999888889999998854321 11234567889999999999999998888888888999999999999


Q ss_pred             hhhhhhhc
Q psy16893        101 HVRRWTKD  108 (112)
Q Consensus       101 l~~~~~~~  108 (112)
                      |.+.+...
T Consensus        80 L~~~l~~~   87 (250)
T cd05123          80 LFSHLSKE   87 (250)
T ss_pred             HHHHHHhc
Confidence            98888653

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0576|consensus

Probab=99.26  E-value=6.1e-13  Score=91.93  Aligned_cols=87  Identities=16%  Similarity=0.066  Sum_probs=73.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+...+|+|+|| .||++++..++...|+|.+....  ....+..++|+.+++..+|||||.+.+.+...+.+|+.||
T Consensus        16 dyellqrvgsgTyg-dvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   16 DYELLQRVGSGTYG-DVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             chhheeeecCCccc-chhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            45677889999999 99999999999999999986432  2223556789999999999999999988888788999999


Q ss_pred             ccCCcchhhh
Q psy16893         95 LRLGEVHVRR  104 (112)
Q Consensus        95 ~~~~~~l~~~  104 (112)
                      ||.+|+|.|.
T Consensus        93 ycgggslQdi  102 (829)
T KOG0576|consen   93 YCGGGSLQDI  102 (829)
T ss_pred             ecCCCcccce
Confidence            9999987663

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.26  E-value=6.4e-11  Score=77.93  Aligned_cols=90  Identities=23%  Similarity=0.229  Sum_probs=69.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+...+.||+|+|| .||.+.+..++..+|+|.+............+.+|+.+++.++|+|++.+.+.+..      ...
T Consensus        17 ~y~~~~~lg~g~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          17 RYQNLKPIGSGAQG-IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             ceEEEEEeccCCCE-EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            34566789999999 99999999899999999986443333445667789999999999999977665432      245


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .|++|||+.+ ++.+.+.
T Consensus        96 ~~lv~e~~~~-~l~~~~~  112 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQ  112 (353)
T ss_pred             EEEEEeccCC-CHHHHHh
Confidence            7999999976 5666543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.26  E-value=7.2e-11  Score=74.46  Aligned_cols=87  Identities=13%  Similarity=0.042  Sum_probs=67.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|++| .||++....+ ..+++|.+....   ...+.+.+|+.+++.+.|+|++.+...+.. +..+++|||
T Consensus         8 ~~~~~~ig~g~~~-~v~~~~~~~~-~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05069           8 LRLDVKLGQGCFG-EVWMGTWNGT-TKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEF   81 (260)
T ss_pred             eeeeeeecCcCCC-eEEEEEEcCC-ceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEc
Confidence            4566789999999 9999886544 458999875322   223567889999999999999987776544 457999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (260)
T cd05069          82 MGKGSLLDFLKEG   94 (260)
T ss_pred             CCCCCHHHHHhhC
Confidence            9999999888653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.26  E-value=1.1e-10  Score=72.73  Aligned_cols=88  Identities=15%  Similarity=0.177  Sum_probs=73.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|.+| .+|++....++..+++|.+.....  .....+.+|+..++.+.|+|++.+.+.+......++++||+
T Consensus         3 ~~~~~l~~g~~~-~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~   79 (253)
T cd05122           3 EILEKIGKGGFG-EVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC   79 (253)
T ss_pred             eeeeeeccCCce-EEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence            345689999999 999999888889999999864322  34567889999999999999999988887778899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+.+..
T Consensus        80 ~~~~L~~~~~~   90 (253)
T cd05122          80 SGGSLKDLLKS   90 (253)
T ss_pred             CCCcHHHHHhh
Confidence            99998887754

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.25  E-value=4.1e-11  Score=77.41  Aligned_cols=78  Identities=15%  Similarity=-0.018  Sum_probs=62.7

Q ss_pred             EEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        30 ~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .++.+....++..+|+|.+............+..|+.+++.++|+||+.+.+.+...+..+++|||++++++.+.+..
T Consensus        15 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~   92 (314)
T cd08216          15 IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT   92 (314)
T ss_pred             eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH
Confidence            455555566889999999864423334456788999999999999999988888888889999999999998887754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.25  E-value=8.1e-11  Score=74.48  Aligned_cols=87  Identities=11%  Similarity=-0.077  Sum_probs=65.6

Q ss_pred             cccccCCcceEEEEEEcCC------------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC
Q psy16893         20 DEVGLLSICSSVKAVTDPR------------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR   87 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~------------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (112)
                      +.||+|+|| .||++....            ....+++|.+...  .......+..|+.++..++||||+.+.+.+....
T Consensus         1 ~~lg~G~~~-~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRT-QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcc-eEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            368999999 999986421            1235888887432  1233456778889999999999999988877777


Q ss_pred             ceEEEEeccCCcchhhhhhhcC
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      ..+++|||+++++|...+....
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~   99 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKS   99 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcC
Confidence            7899999999998776665433

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.25  E-value=7.7e-11  Score=75.15  Aligned_cols=88  Identities=17%  Similarity=0.074  Sum_probs=70.2

Q ss_pred             hcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||+|+|| .||.+..     ..++..+++|.+...  .......+.+|+.+++.++|+|++.+.+.+...+..++
T Consensus         8 ~~~~~lg~g~~g-~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           8 VLKWELGEGAFG-KVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             eeccccCCccCC-eEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            456789999999 9998853     234567899987532  23345678899999999999999998887777777899


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ++||+++++|.+.+..
T Consensus        85 v~e~~~~~~L~~~i~~  100 (280)
T cd05092          85 VFEYMRHGDLNRFLRS  100 (280)
T ss_pred             EEecCCCCCHHHHHHh
Confidence            9999999999888754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.25  E-value=9.2e-11  Score=73.90  Aligned_cols=87  Identities=14%  Similarity=0.048  Sum_probs=68.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++... .+..+|+|.+.....   ....+.+|+.++++++|+|++.+...... ...|++||
T Consensus         7 ~~~~~~~ig~g~~~-~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e   80 (260)
T cd05070           7 SLQLIKKLGNGQFG-EVWMGTWN-GNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTE   80 (260)
T ss_pred             HhhhhheeccccCc-eEEEEEec-CCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEE
Confidence            34667789999999 99998755 556699998853222   23467889999999999999988776544 45799999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+.+
T Consensus        81 ~~~~~~L~~~~~~   93 (260)
T cd05070          81 YMSKGSLLDFLKD   93 (260)
T ss_pred             ecCCCcHHHHHHh
Confidence            9999999888764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.25  E-value=8.6e-11  Score=76.17  Aligned_cols=89  Identities=19%  Similarity=0.141  Sum_probs=71.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ...+.||+|+|| .||++....++..+++|.+..... .....+.+..|+.+++.++|+|++.+.+.+...+..|++|||
T Consensus        24 ~~~~~lg~g~~g-~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          24 VGLHEIGHGSFG-AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hcceeeccCCCe-EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            444579999999 999999888899999998853322 223345678899999999999999998888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+ ++.+.+..
T Consensus       103 ~~~-~l~~~l~~  113 (313)
T cd06633         103 CLG-SASDLLEV  113 (313)
T ss_pred             CCC-CHHHHHHh
Confidence            975 56666644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0690|consensus

Probab=99.25  E-value=5.1e-12  Score=81.78  Aligned_cols=90  Identities=13%  Similarity=0.063  Sum_probs=74.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ..+++||.|.|| .|..|..+.+++.+|+|.+++... ...+...-+.|-++|...+||.+..+...+...+.+|+||||
T Consensus       171 dfLKvLGkGTFG-KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey  249 (516)
T KOG0690|consen  171 DFLKVLGKGTFG-KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY  249 (516)
T ss_pred             hHHHHhcCCccc-eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence            456789999999 999999999999999999976532 222334456788999999999999998888888999999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      ..||.|+-.+..
T Consensus       250 anGGeLf~HLsr  261 (516)
T KOG0690|consen  250 ANGGELFFHLSR  261 (516)
T ss_pred             ccCceEeeehhh
Confidence            999999877643

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.25  E-value=4.9e-11  Score=75.90  Aligned_cols=89  Identities=19%  Similarity=0.151  Sum_probs=70.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      .+.+.||+|++| .||++....+++.+++|.+...... .......+|+..+..+. |+|++.+.+.+...+..+++|||
T Consensus         2 ~~~~~ig~g~~g-~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           2 KVIKQLGDGTFG-SVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             eeheeeccCCce-EEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            345689999999 9999998888899999998543222 22233456889999999 99999998888888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      + ++++.+.+...
T Consensus        80 ~-~~~l~~~~~~~   91 (283)
T cd07830          80 M-EGNLYQLMKDR   91 (283)
T ss_pred             C-CCCHHHHHHhc
Confidence            9 66888877654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.25  E-value=8.9e-11  Score=73.81  Aligned_cols=88  Identities=14%  Similarity=0.084  Sum_probs=69.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-CCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-YTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++...  +..+++|.+...    ...+.+.+|+.+++.++|+|++.+.+.+ ...+..++++
T Consensus         7 ~~~~~~~lg~g~~~-~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (256)
T cd05082           7 ELKLLQTIGKGEFG-DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   79 (256)
T ss_pred             hCeeeeeecccCCC-eEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence            44667889999999 99998654  667999987532    2245678899999999999999887654 4456789999


Q ss_pred             eccCCcchhhhhhhcC
Q psy16893         94 TLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~  109 (112)
                      ||+++++|.+.++...
T Consensus        80 e~~~~~~L~~~~~~~~   95 (256)
T cd05082          80 EYMAKGSLVDYLRSRG   95 (256)
T ss_pred             ECCCCCcHHHHHHhcC
Confidence            9999999999886543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.25  E-value=9.7e-11  Score=74.95  Aligned_cols=86  Identities=20%  Similarity=0.192  Sum_probs=71.3

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .+.||+|++| .+|++....++..+++|.+...  .....+.+.+|+.+++.+.|+|++.+.+.+...+..++++||+.+
T Consensus        24 ~~~lg~g~~g-~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          24 FVKIGEGSTG-IVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             ceEeccCCCe-EEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            3589999999 9999988888899999987532  223345678899999999999999988877777889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      ++|.+.+..
T Consensus       101 ~~L~~~~~~  109 (285)
T cd06648         101 GALTDIVTH  109 (285)
T ss_pred             CCHHHHHHh
Confidence            999887754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0587|consensus

Probab=99.25  E-value=4.3e-11  Score=84.85  Aligned_cols=89  Identities=13%  Similarity=0.052  Sum_probs=70.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCC-----CCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPY-----TTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~-----~~~~   88 (112)
                      ...+.+++|.|.+| .||++...++++.+|+|.....   .....+...|..+++... |||++.+++++.     .+++
T Consensus        20 ~~ei~evig~Gtyg-kv~k~k~~~~~~~aa~kI~~~~---~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYG-KVYKGRHVKTGQLAAIKIMDPT---EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             ccEEEEEEeeccce-eEEEEeeeecCceeeeEeecCC---ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            33667799999999 9999999999999999987432   233355666788888776 999997766542     3678


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|||||||.+|+.-|.+++
T Consensus        96 LWLVMEfC~gGSVTDLVKn  114 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKN  114 (953)
T ss_pred             EEEEeeccCCccHHHHHhh
Confidence            9999999999998887764

>KOG1025|consensus

Probab=99.25  E-value=4e-12  Score=89.94  Aligned_cols=92  Identities=15%  Similarity=0.005  Sum_probs=74.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCC----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +..++||+|+|| .||++..-..+    .+||+|++. .+.......+++.|+-+|..+.|||++.+.+++..+. +.||
T Consensus       699 kk~kvLGsgAfG-tV~kGiw~Pege~vKipVaiKvl~-~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  699 KKDKVLGSGAFG-TVYKGIWIPEGENVKIPVAIKVLI-EFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhceeccccce-eEEeeeEecCCceecceeEEEEee-ccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            445689999999 99998654333    459999885 3333445678999999999999999999999887754 8899


Q ss_pred             EeccCCcchhhhhhhcCCC
Q psy16893         93 LTLRLGEVHVRRWTKDQGP  111 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~~~  111 (112)
                      ++||+.|.|+|+++..+++
T Consensus       776 tq~mP~G~LlDyvr~hr~~  794 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDN  794 (1177)
T ss_pred             HHhcccchHHHHHHHhhcc
Confidence            9999999999999876664

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=9.5e-11  Score=74.05  Aligned_cols=88  Identities=14%  Similarity=0.106  Sum_probs=70.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC------CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT------TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~   87 (112)
                      .+.+.+.||+|++| .+|.+.+..+++.+++|.+...   ......+.+|+.++..+ .|+|++.+.+.+..      ..
T Consensus         7 ~y~~~~~l~~g~~~-~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           7 IFELVEVIGEGTYG-KVYKARHKKTGQLVAIKIMDII---EDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             heeheeeecCCCCe-EEEEEEECCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            45667889999999 9999998888889999988532   22335678899999998 69999988776643      34


Q ss_pred             ceEEEEeccCCcchhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~  106 (112)
                      .+|++|||+++++|.+.+.
T Consensus        83 ~~~lv~e~~~~~~L~~~~~  101 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVK  101 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHH
Confidence            5899999999998877664

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0658|consensus

Probab=99.24  E-value=2.2e-12  Score=83.58  Aligned_cols=84  Identities=17%  Similarity=0.008  Sum_probs=63.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC---CC--ce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT---TR--RM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---~~--~~   89 (112)
                      .+.-.+++|.|+|| .||.+....+++.+|+|++..+.      +---+|+.+|+.+.|||||.+..++..   .+  .+
T Consensus        25 ~~~~~~liG~GsFg-~Vyq~~~~e~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFG-VVYQAKLRETEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEEeeEEEeecccc-eEEEEEEcCCCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence            44455789999999 99999988889999999885221      112369999999999999976554432   22  45


Q ss_pred             EEEEeccCCcchhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~  106 (112)
                      .|||||++. +|.+.++
T Consensus        98 nlVleymP~-tL~~~~r  113 (364)
T KOG0658|consen   98 NLVLEYMPE-TLYRVIR  113 (364)
T ss_pred             HHHHHhchH-HHHHHHH
Confidence            689999986 7888876

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.24  E-value=5.1e-11  Score=76.88  Aligned_cols=87  Identities=20%  Similarity=0.130  Sum_probs=68.1

Q ss_pred             hcccccccCCcceEEEEEEcCC--CCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--CceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPR--DGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~--~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l   91 (112)
                      .+.+.||+|++| .||++....  ++..+|+|.+.... ..........+|+.++..++|||++.+.+.+...  ..+++
T Consensus         3 ~~~~~ig~g~~g-~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           3 EIEGCIGRGTYG-RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             eEEEEeccCCcE-EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            455689999999 999999877  78899999986422 1122235677899999999999999888877665  78999


Q ss_pred             EEeccCCcchhhhh
Q psy16893         92 GLTLRLGEVHVRRW  105 (112)
Q Consensus        92 v~e~~~~~~l~~~~  105 (112)
                      ||||+++ ++.+.+
T Consensus        82 v~e~~~~-~l~~~~   94 (316)
T cd07842          82 LFDYAEH-DLWQII   94 (316)
T ss_pred             EEeCCCc-CHHHHH
Confidence            9999986 455544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG4257|consensus

Probab=99.24  E-value=2.8e-11  Score=83.85  Aligned_cols=87  Identities=11%  Similarity=0.019  Sum_probs=70.8

Q ss_pred             cccccccCCcceEEEEEEcCCC----CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRD----GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~----~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.||.|.|| .||.+.+...    .-.||+|....+ ..+...+.+++|+-+|+.+.|||||.+.+.+.. ..+|+||
T Consensus       393 l~r~iG~GqFG-dVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm  469 (974)
T KOG4257|consen  393 LKRLIGEGQFG-DVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM  469 (974)
T ss_pred             HHHhhcCCccc-ceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence            45689999999 9999975432    234899988543 445557889999999999999999999998877 3489999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      |+++-|+|-.+++.
T Consensus       470 EL~~~GELr~yLq~  483 (974)
T KOG4257|consen  470 ELAPLGELREYLQQ  483 (974)
T ss_pred             ecccchhHHHHHHh
Confidence            99999999888864

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.24  E-value=1.3e-10  Score=74.10  Aligned_cols=86  Identities=14%  Similarity=0.015  Sum_probs=63.6

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHH---HHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRE---LKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e---~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .||+|+|| .||++.+..+++.+|+|.+...... .........|   +..+....|+|++.+...+...+..+++|||+
T Consensus         1 ~ig~g~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFG-EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCe-EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence            47999999 9999998888999999988543211 1111122233   33455567999999888888878899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .+++|.+++..
T Consensus        80 ~g~~L~~~l~~   90 (278)
T cd05606          80 NGGDLHYHLSQ   90 (278)
T ss_pred             CCCcHHHHHHh
Confidence            99998877753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.24  E-value=7.2e-11  Score=77.15  Aligned_cols=91  Identities=20%  Similarity=0.177  Sum_probs=70.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC--CCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT--TRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~l   91 (112)
                      .+.+.+.||+|+|| .+|++.+..++..+++|.+............+.+|+.++..+ +|+||+.+.+.+..  ....|+
T Consensus         8 ~y~~~~~lg~g~~~-~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           8 KYEILQKLGKGAYG-IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             HHHHhHhhcCCCCe-eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            44666789999999 999999888889999998854332233345677899999999 89999988876543  346899


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      +|||+.+ +|.+.+..
T Consensus        87 v~e~~~~-~L~~~~~~  101 (337)
T cd07852          87 VFEYMET-DLHAVIRA  101 (337)
T ss_pred             Eeccccc-CHHHHHhc
Confidence            9999985 67776643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.23  E-value=1.4e-10  Score=73.06  Aligned_cols=86  Identities=15%  Similarity=-0.013  Sum_probs=65.7

Q ss_pred             cccccCCcceEEEEEEcCC---CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC-CCCceEEEEec
Q psy16893         20 DEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY-TTRRMYPGLTL   95 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~   95 (112)
                      +.||+|+|| .||++....   ....+|+|.+... ........+.+|+.+++.++|||++.+.+.+. .....++++||
T Consensus         1 ~~lg~g~~g-~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFG-CVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCc-eEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            368999999 999987532   3456999987432 22334567788999999999999998877554 35567999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+++|.+++..
T Consensus        79 ~~~~~L~~~~~~   90 (262)
T cd05058          79 MKHGDLRNFIRS   90 (262)
T ss_pred             CCCCCHHHHHHh
Confidence            999999888754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.23  E-value=5.1e-11  Score=77.52  Aligned_cols=90  Identities=27%  Similarity=0.358  Sum_probs=71.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC-----CceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT-----RRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~   90 (112)
                      +.+.+.||+|++| .||++.+..++..+++|.+..........+.+.+|+.+++.++|+|++.+.+.+...     ..+|
T Consensus         2 y~i~~~ig~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           2 YELLKPIGSGAYG-VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             ceeeeeecCCCCe-EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            3456789999999 999999888899999999864433234456788999999999999999887766554     3789


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+++ +|.+.+..
T Consensus        81 lv~e~~~~-~l~~~l~~   96 (330)
T cd07834          81 IVTELMET-DLHKVIKS   96 (330)
T ss_pred             EEecchhh-hHHHHHhC
Confidence            99999985 67776653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.23  E-value=1.1e-10  Score=74.61  Aligned_cols=90  Identities=19%  Similarity=0.058  Sum_probs=63.3

Q ss_pred             hhcccccccCCcceEEEEEEcCC-CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC---CCCCeEeeeccCC-----CC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPR-DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF---KHDNVSITQHTPY-----TT   86 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~-~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~~   86 (112)
                      |.+.+.||+|+|| .||++.+.. .+..+|+|.+..............+|+.+++.+   .||||+.+.+.+.     ..
T Consensus         3 Y~~~~~lg~G~~g-~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           3 YECVAEIGEGAYG-KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             cceeeEeccCCCe-EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            4456789999999 999998754 467899998854322222234455677666655   6999998776542     34


Q ss_pred             CceEEEEeccCCcchhhhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..++++|||+.+ +|.+.+..
T Consensus        82 ~~~~lv~e~~~~-~l~~~~~~  101 (290)
T cd07862          82 TKLTLVFEHVDQ-DLTTYLDK  101 (290)
T ss_pred             CcEEEEEccCCC-CHHHHHHh
Confidence            568999999975 67776643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0612|consensus

Probab=99.23  E-value=2.3e-12  Score=93.13  Aligned_cols=92  Identities=13%  Similarity=0.043  Sum_probs=74.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.++++||+|+|| .|.....+.+++.+|+|.+++-. .......-|..|-.+|...+.+.|+.+.-.+.+.+++|+||
T Consensus        76 DfeilKvIGrGaFG-EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM  154 (1317)
T KOG0612|consen   76 DFEILKVIGRGAFG-EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM  154 (1317)
T ss_pred             hhHHHHHhcccccc-eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence            34577899999999 99999999999999999986421 11222334666777888888999999988899999999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||++||+|+..+.+
T Consensus       155 dY~pGGDlltLlSk  168 (1317)
T KOG0612|consen  155 DYMPGGDLLTLLSK  168 (1317)
T ss_pred             ecccCchHHHHHhh
Confidence            99999999876643

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=3.7e-11  Score=81.83  Aligned_cols=84  Identities=15%  Similarity=-0.012  Sum_probs=69.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      ++.+.+.||+|+|| .||++.+..+++.||+|....        ....+|+.+++.++|+||+.+.+.+...+..+++||
T Consensus       170 gy~i~~~Lg~G~~G-~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        170 GFAIHRALTPGSEG-CVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             CeEEEEEEccCCCe-EEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            45677889999999 999999998999999996421        234679999999999999998887777778899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      ++. ++|.+++...
T Consensus       241 ~~~-~~L~~~l~~~  253 (461)
T PHA03211        241 KYR-SDLYTYLGAR  253 (461)
T ss_pred             ccC-CCHHHHHHhc
Confidence            996 4677777543

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.23  E-value=1.1e-10  Score=74.41  Aligned_cols=89  Identities=12%  Similarity=-0.047  Sum_probs=71.2

Q ss_pred             hhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      +.+.+.||+|+|| .||++....     .+..+|+|.+.... .......+..|+.++..++||||+.+.+.+......+
T Consensus         7 ~~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           7 VRFMEELGEDRFG-KVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHhCCCCCC-eEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            4566789999999 999987543     34679999986332 2223456788999999999999999988888877899


Q ss_pred             EEEeccCCcchhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWT  106 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~  106 (112)
                      +++||+.+++|.+++.
T Consensus        85 ~~~e~~~~~~l~~~l~  100 (283)
T cd05091          85 MIFSYCSHSDLHEFLV  100 (283)
T ss_pred             EEEEcCCCCcHHHHHH
Confidence            9999999999888874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.22  E-value=1.3e-10  Score=73.62  Aligned_cols=89  Identities=12%  Similarity=-0.014  Sum_probs=68.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++.....   ...+++|...... .....+.+.+|+.+++.+.|+|++.+.+.+.. +..|++
T Consensus         8 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           8 ITLGRCIGEGQFG-DVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             ceeeeeeCCccce-eEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            3466789999999 9999875433   3468999875322 23345678899999999999999988876655 457899


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+++..
T Consensus        85 ~e~~~~~~L~~~l~~   99 (270)
T cd05056          85 MELAPLGELRSYLQV   99 (270)
T ss_pred             EEcCCCCcHHHHHHh
Confidence            999999999988865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.22  E-value=6.7e-11  Score=78.07  Aligned_cols=85  Identities=19%  Similarity=0.000  Sum_probs=69.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      ++.+.+.||+|+|| .||++....++..||+|.....        ....|+.+++.++|+||+.+.+.+......++++|
T Consensus        67 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         67 GYTVIKTLTPGSEG-RVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             CcEEEEEecCCCCe-EEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            45677899999999 9999999888889999975321        12458889999999999999888888788899999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      ++.+ +|.+++....
T Consensus       138 ~~~~-~l~~~l~~~~  151 (357)
T PHA03209        138 HYSS-DLYTYLTKRS  151 (357)
T ss_pred             ccCC-cHHHHHHhcc
Confidence            9965 6788776543

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.22  E-value=1.5e-10  Score=73.89  Aligned_cols=86  Identities=13%  Similarity=-0.013  Sum_probs=63.2

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHH---HHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELK---MLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .||+|+|| .||++.+..++..+|+|.+...... .........+..   ++....|+|++.+...+...+..+++|||+
T Consensus         1 ~lg~G~~g-~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFG-EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             CcccCCCe-EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence            47999999 9999998888999999988543221 111222334443   333446999998888777777899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+++..
T Consensus        80 ~~~~L~~~i~~   90 (279)
T cd05633          80 NGGDLHYHLSQ   90 (279)
T ss_pred             CCCCHHHHHHh
Confidence            99998877753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.22  E-value=1.4e-10  Score=74.29  Aligned_cols=88  Identities=20%  Similarity=0.161  Sum_probs=69.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-----CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-----TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~   88 (112)
                      .+.+...||+|+|| .||++....++..+|+|.+...   ......+.+|+.++..+ +|+|++.+.+.+..     ...
T Consensus        23 ~y~~~~~l~~g~~~-~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~   98 (291)
T cd06639          23 TWEIIETIGKGTYG-KVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ   98 (291)
T ss_pred             CeEEEEEeecCCCe-EEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence            45667789999999 9999998888999999988532   12234567788888888 69999987775543     245


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .|+++||+++++|.+.++
T Consensus        99 ~~lv~ey~~~~sL~~~~~  116 (291)
T cd06639          99 LWLVLELCNGGSVTELVK  116 (291)
T ss_pred             eEEEEEECCCCcHHHHHH
Confidence            899999999999887664

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.22  E-value=9.7e-11  Score=75.38  Aligned_cols=93  Identities=19%  Similarity=0.061  Sum_probs=69.6

Q ss_pred             cchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------
Q psy16893         12 DEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------   85 (112)
Q Consensus        12 ~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------   85 (112)
                      ....+.+.+.||+|+|| .||++....+++.+++|.+..............+|+.+++.++|+||+.+.+.+..      
T Consensus         6 ~~~~y~~~~~lg~g~~~-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           6 KLRDYEILGKLGEGTFG-EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             ccccEEEEEEeccCCCE-EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence            34466778899999999 99999998889999999885332222223456789999999999999987665432      


Q ss_pred             --CCceEEEEeccCCcchhhhhh
Q psy16893         86 --TRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        86 --~~~~~lv~e~~~~~~l~~~~~  106 (112)
                        ...+++++||+.+ ++.+.+.
T Consensus        85 ~~~~~~~lv~~~~~~-~l~~~~~  106 (311)
T cd07866          85 RKRGSVYMVTPYMDH-DLSGLLE  106 (311)
T ss_pred             ccCceEEEEEecCCc-CHHHHHh
Confidence              3357999999986 4555543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=1.8e-10  Score=72.50  Aligned_cols=87  Identities=13%  Similarity=-0.035  Sum_probs=65.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHH-HhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKM-LCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.+..+++.+|+|.+...... .........|..+ .....|+|++.+...+...+..|+++||++
T Consensus         2 ~~l~~g~~~-~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           2 KPISKGAFG-SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             ccCCcCCCe-eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            468999999 9999998888999999988543211 1122334445443 344579999999888888888999999999


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      +++|.+.+..
T Consensus        81 ~~~L~~~l~~   90 (260)
T cd05611          81 GGDCASLIKT   90 (260)
T ss_pred             CCCHHHHHHH
Confidence            9998887754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.21  E-value=1.8e-10  Score=73.41  Aligned_cols=91  Identities=9%  Similarity=-0.040  Sum_probs=67.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.||+|+|| .||++....++.    .+++|.+... ........+..|+..+..+.||||+.+.+.+.. ...+++
T Consensus        10 ~~~~~lg~G~~~-~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i   86 (279)
T cd05111          10 RKLKLLGSGVFG-TVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV   86 (279)
T ss_pred             eeccccCccCCc-ceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence            456789999999 999998766665    3677776421 112233567778888899999999988876554 447889


Q ss_pred             EeccCCcchhhhhhhcCC
Q psy16893         93 LTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~~  110 (112)
                      +||+++++|.+.+....+
T Consensus        87 ~e~~~~gsL~~~l~~~~~  104 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRD  104 (279)
T ss_pred             EEeCCCCcHHHHHHhccc
Confidence            999999999998865443

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.21  E-value=6.7e-11  Score=80.13  Aligned_cols=82  Identities=16%  Similarity=0.051  Sum_probs=62.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--------CCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--------TTR   87 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--------~~~   87 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+....      ....+|+.+++.++|+|++.+.+.+.        ...
T Consensus        68 y~~~~~LG~G~fg-~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         68 YKLGNIIGNGSFG-VVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             EEEeEEEEeCCCE-EEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            4677899999999 99999998899999999884221      22346999999999999997655332        123


Q ss_pred             ceEEEEeccCCcchhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~  105 (112)
                      .++++|||+++ ++.+.+
T Consensus       141 ~l~lvmE~~~~-~l~~~~  157 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYM  157 (440)
T ss_pred             EEEEEEecCCc-cHHHHH
Confidence            46799999986 455544

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.21  E-value=1.8e-10  Score=74.52  Aligned_cols=90  Identities=20%  Similarity=0.140  Sum_probs=70.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +...+.||+|++| .||++....++..+++|.+.... ......+.+..|+.+++.++|+|++.+.+.+...+..++++|
T Consensus        17 ~~~~~~lg~g~~g-~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          17 FSDLREIGHGSFG-AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHheeeCCCE-EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            4455689999999 99999988888999999885321 222334567789999999999999998887777788899999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ ++.+.+..
T Consensus        96 ~~~~-~l~~~~~~  107 (308)
T cd06634          96 YCLG-SASDLLEV  107 (308)
T ss_pred             ccCC-CHHHHHHH
Confidence            9975 66665543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.20  E-value=1.7e-10  Score=73.09  Aligned_cols=89  Identities=17%  Similarity=0.011  Sum_probs=66.7

Q ss_pred             hcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------C
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------R   87 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~   87 (112)
                      .+.++||+|+|| .||++...   .+++.+|+|.+............+.+|+.+++.++|||++.+.+.....      .
T Consensus         2 ~~~~~ig~g~~g-~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           2 TLGRMLGKGEFG-SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             cchhcccCCCCC-CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345689999999 99998743   3567899999864433344456688899999999999999877754321      1


Q ss_pred             ceEEEEeccCCcchhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~  106 (112)
                      ..+++++|+.++++.+.+.
T Consensus        81 ~~~~~~~~~~~~~l~~~~~   99 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLL   99 (273)
T ss_pred             ceEEEEecCCCCcHHHHHH
Confidence            3478899999998876653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.20  E-value=7e-11  Score=75.00  Aligned_cols=88  Identities=22%  Similarity=0.152  Sum_probs=72.1

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ..+.||+|.+| .+|.+....+++.+++|.+..........+.+..|+.+++.++|+|++.+.+.+...+..++++||+.
T Consensus         3 ~~~~ig~g~~~-~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           3 KLEKLGEGTYG-VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eehcccccCcc-eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            34678999999 99999998889999999986433222234567789999999999999999988888788999999998


Q ss_pred             Ccchhhhhhh
Q psy16893         98 GEVHVRRWTK  107 (112)
Q Consensus        98 ~~~l~~~~~~  107 (112)
                      + +|.+.+..
T Consensus        82 ~-~l~~~i~~   90 (282)
T cd07829          82 M-DLKKYLDK   90 (282)
T ss_pred             c-CHHHHHHh
Confidence            5 78877754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.20  E-value=1.8e-10  Score=73.27  Aligned_cols=91  Identities=10%  Similarity=-0.062  Sum_probs=71.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCC----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~   89 (112)
                      .+.+.+.||+|+|| .||++....    .+..+++|.+... ........+.+|+.+++.++|+|++.+.+.+.. ....
T Consensus         7 ~~~~~~~i~~g~~g-~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           7 RVTLSDLLQEGTFG-RIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             heEEeeeecccCCc-eEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            45677899999999 999998654    2577999987532 233445678899999999999999988775544 5668


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++++|+++++|.+.+..
T Consensus        85 ~~~~~~~~~~~L~~~l~~  102 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQ  102 (280)
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999998887754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.19  E-value=1.4e-10  Score=75.76  Aligned_cols=90  Identities=21%  Similarity=0.157  Sum_probs=68.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+... ........+..|+.++..++|+|++.+.+.+..     ...+
T Consensus         6 ~y~i~~~lg~G~~g-~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           6 RYQNLSYIGEGAYG-MVCSATHKPTGVKVAIKKISPF-EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ceEEEEEEEecCCe-EEEEEEEcCCCCeEEEEEeccc-ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            35567889999999 9999998889999999998522 222334567889999999999999977664332     3468


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+++||+.+ ++.+.+..
T Consensus        84 ~lv~e~~~~-~l~~~~~~  100 (336)
T cd07849          84 YIVQELMET-DLYKLIKT  100 (336)
T ss_pred             EEEehhccc-CHHHHHhc
Confidence            999999986 56665543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.19  E-value=2.5e-10  Score=72.64  Aligned_cols=90  Identities=16%  Similarity=-0.009  Sum_probs=69.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.||+|+|| .||++....++.    .||+|.+... ........+.+|+.++..+.|+|++.+.+.+.. ...+++
T Consensus        10 ~~~~~lg~G~~g-~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~   86 (279)
T cd05109          10 KKVKVLGSGAFG-TVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV   86 (279)
T ss_pred             eeeeecCCCCCc-eEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence            456789999999 999998665554    4799988532 223334668889999999999999988776654 346899


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      +||+++|+|.+.++...
T Consensus        87 ~~~~~~g~l~~~l~~~~  103 (279)
T cd05109          87 TQLMPYGCLLDYVRENK  103 (279)
T ss_pred             EEcCCCCCHHHHHhhcc
Confidence            99999999999886543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.19  E-value=2.2e-10  Score=74.16  Aligned_cols=81  Identities=22%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             cccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCCceEEEEec
Q psy16893         20 DEVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTRRMYPGLTL   95 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~   95 (112)
                      ..||+|+|| .||++...  .++..+|+|.+....    ......+|+.++++++||||+.+...+.  ....+|+++||
T Consensus         7 ~~lG~G~~g-~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           7 CKVGRGTYG-HVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             cccccCCCe-EEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            478999999 99999854  466789999885321    1244678999999999999998877553  35668999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +.+ .+.+.+.
T Consensus        82 ~~~-~l~~~~~   91 (317)
T cd07868          82 AEH-DLWHIIK   91 (317)
T ss_pred             cCC-CHHHHHH
Confidence            976 5666553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.18  E-value=8.3e-11  Score=74.07  Aligned_cols=90  Identities=13%  Similarity=0.057  Sum_probs=67.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccc---cCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNV---FQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~---~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++.+..++...++|.+...   ............|+.++..++|||++.+.+.+......+++
T Consensus         2 y~i~~~ig~g~~g-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           2 YILQQRLGKGSFG-TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             ceeeeeecCCCCc-eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3456789999999 9999987766665666655321   11122234566788999999999999988888777789999


Q ss_pred             EeccCCcchhhhhh
Q psy16893         93 LTLRLGEVHVRRWT  106 (112)
Q Consensus        93 ~e~~~~~~l~~~~~  106 (112)
                      +||+++++|.+.+.
T Consensus        81 ~e~~~~~~l~~~~~   94 (260)
T cd08222          81 TEYCEGRDLDCKLE   94 (260)
T ss_pred             EEeCCCCCHHHHHH
Confidence            99999999877664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0666|consensus

Probab=99.18  E-value=1.1e-11  Score=79.69  Aligned_cols=92  Identities=14%  Similarity=0.050  Sum_probs=71.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~   89 (112)
                      .+.....||+|+|| .||++....++    ..+|+|.+........-....-+|+..++.++|+|++.+..++.. +..+
T Consensus        25 ~ye~ig~Ig~GTYG-~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYG-KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             Hhhccceecccccc-eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            55677789999999 99999544433    368999886443333334667789999999999999998887766 7889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++||.+.+ |...++.-
T Consensus       104 ~l~fdYAEhD-L~~II~fH  121 (438)
T KOG0666|consen  104 WLLFDYAEHD-LWHIIKFH  121 (438)
T ss_pred             EEEehhhhhh-HHHHHHHh
Confidence            9999999985 67766543

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.18  E-value=1.3e-10  Score=74.25  Aligned_cols=91  Identities=13%  Similarity=0.003  Sum_probs=70.1

Q ss_pred             hhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|++| .||.+...   .++..+|+|.+.....  .....+.+..|+.++..+. |+|++.+...+......
T Consensus         2 ~~~~~~ig~G~~~-~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           2 FELLRVLGTGAYG-KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             ceEEEEeccCCCc-eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            3456789999999 99987643   4567899998853221  1122356778999999994 99999888777777789


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+.+++|.+.+..
T Consensus        81 ~lv~e~~~~~~L~~~~~~   98 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ   98 (288)
T ss_pred             EEEEecCCCCcHHHHHhh
Confidence            999999999999888754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.17  E-value=1.4e-10  Score=76.08  Aligned_cols=91  Identities=27%  Similarity=0.255  Sum_probs=69.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC------c
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR------R   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~   88 (112)
                      .+.+...||+|.+| .+|.+.+..++..+|+|.+............+.+|+.+++.+.|+|++.+.+.+...+      .
T Consensus        16 ~y~~~~~ig~g~~g-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07851          16 RYQNLSPVGSGAYG-QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD   94 (343)
T ss_pred             ceEEEEEeccCCce-EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence            34567789999999 9999999888999999988643322333456778999999999999997766554433      4


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +++++||+. ++|.+.+..
T Consensus        95 ~~lv~e~~~-~~L~~~~~~  112 (343)
T cd07851          95 VYLVTHLMG-ADLNNIVKC  112 (343)
T ss_pred             EEEEEecCC-CCHHHHHhc
Confidence            899999985 477776643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.17  E-value=2.8e-10  Score=74.79  Aligned_cols=90  Identities=32%  Similarity=0.315  Sum_probs=67.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||.+.+..++..||+|.+..........+.+.+|+.++..++|+||+.+.+.+..      ...
T Consensus        18 ~y~~~~~lg~G~~g-~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (345)
T cd07877          18 RYQNLSPVGSGAYG-SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   96 (345)
T ss_pred             ceEEEEEeeecCCe-EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence            34566789999999 99999988889999999986433222334567789999999999999977665432      245


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .|++++++ +++|.+.+.
T Consensus        97 ~~lv~~~~-~~~L~~~~~  113 (345)
T cd07877          97 VYLVTHLM-GADLNNIVK  113 (345)
T ss_pred             EEEEehhc-ccCHHHHHh
Confidence            78888877 556665543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.17  E-value=2.3e-10  Score=71.84  Aligned_cols=85  Identities=15%  Similarity=0.138  Sum_probs=67.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||.+.  .++..+|+|.+...    .....+.+|+.++..++|+|++.+.+.+... ..+++|||
T Consensus         8 ~~~~~~lg~g~~g-~v~~~~--~~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~   79 (254)
T cd05083           8 LTLGEIIGEGEFG-AVLQGE--YTGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL   79 (254)
T ss_pred             ceeeeeeccCCCC-ceEecc--cCCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence            4567789999999 999865  35778999988532    2235678899999999999999887766543 47999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+++|.+++...
T Consensus        80 ~~~~~L~~~l~~~   92 (254)
T cd05083          80 MSKGNLVNFLRTR   92 (254)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999888653

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0604|consensus

Probab=99.17  E-value=1.4e-11  Score=78.74  Aligned_cols=85  Identities=15%  Similarity=0.092  Sum_probs=68.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCC----CCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYT----TRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~----~~~~~l   91 (112)
                      +-.++||-|-.| .|..|.++.+++.+|+|.+.       +.+..++|++.+.... |||||.+.++++.    ...+.+
T Consensus        65 is~qvLG~GinG-kV~~C~~k~T~ekfALKvL~-------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi  136 (400)
T KOG0604|consen   65 ISWQVLGAGING-KVVQCVHKRTQEKFALKVLL-------DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI  136 (400)
T ss_pred             ehhhhhccccCC-ceEEEEeccchhhhHHHHHh-------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence            445789999999 99999999999999999884       1245567888766655 9999988776654    456789


Q ss_pred             EEeccCCcchhhhhhhcC
Q psy16893         92 GLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~  109 (112)
                      |||.|+||+||.|+..++
T Consensus       137 VmE~meGGeLfsriq~~g  154 (400)
T KOG0604|consen  137 VMECMEGGELFSRIQDRG  154 (400)
T ss_pred             eeecccchHHHHHHHHcc
Confidence            999999999999997543

>KOG0579|consensus

Probab=99.16  E-value=4.1e-12  Score=88.20  Aligned_cols=83  Identities=13%  Similarity=0.062  Sum_probs=71.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .++..||.|+|| .||++.++.++...|.|+|.  .........++-|+.+|..+.||+||.+.+.++..+.+|++.|||
T Consensus        35 eIiGELGDGAFG-KVyKA~nket~~lAAaKvIe--tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   35 EIIGELGDGAFG-KVYKAVNKETKLLAAAKVIE--TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHhhhcCccch-hhhhhhcccchhhhhhhhhc--ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            456689999999 99999999888888999883  233455788899999999999999999999888888899999999


Q ss_pred             CCcchh
Q psy16893         97 LGEVHV  102 (112)
Q Consensus        97 ~~~~l~  102 (112)
                      .||..-
T Consensus       112 ~GGAVD  117 (1187)
T KOG0579|consen  112 GGGAVD  117 (1187)
T ss_pred             CCchHh
Confidence            999743

>KOG0599|consensus

Probab=99.16  E-value=2.8e-11  Score=76.79  Aligned_cols=90  Identities=13%  Similarity=0.026  Sum_probs=73.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEccccc--CCh----hhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCce
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF--QSL----VSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~--~~~----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~   89 (112)
                      .-.+++|.|..+ .|-+|....++..+|+|.|....  ..+    ...+.-.+|+.+|+++. ||+|+.+.++++.+..+
T Consensus        20 ~pkeilgrgvss-~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~   98 (411)
T KOG0599|consen   20 EPKEILGRGVSS-VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV   98 (411)
T ss_pred             ChHHHhcccchh-hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence            455688999998 89999999999999999885221  111    12344568999999886 99999999999999999


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+|+|.|+.|+|||.+.+
T Consensus        99 FlVFdl~prGELFDyLts  116 (411)
T KOG0599|consen   99 FLVFDLMPRGELFDYLTS  116 (411)
T ss_pred             hhhhhhcccchHHHHhhh
Confidence            999999999999999865

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.16  E-value=3.8e-10  Score=73.00  Aligned_cols=81  Identities=21%  Similarity=0.151  Sum_probs=61.6

Q ss_pred             cccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCCceEEEEec
Q psy16893         20 DEVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTRRMYPGLTL   95 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~   95 (112)
                      ..||+|+|| .||++...  .++..+|+|.+...    .....+.+|+.+++.++|||++.+...+.  ....+++++||
T Consensus         7 ~~lG~G~~g-~Vy~~~~~~~~~~~~~a~k~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           7 CKVGRGTYG-HVYKAKRKDGKDEKEYALKQIEGT----GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             eEeccCCCe-eEEEEEecCCCccceEEEEEecCC----CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            478999999 99999854  35678999988532    12245678999999999999998877553  35678999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +.+ ++.+.+.
T Consensus        82 ~~~-~l~~~~~   91 (317)
T cd07867          82 AEH-DLWHIIK   91 (317)
T ss_pred             eCC-cHHHHHH
Confidence            986 5665553

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG4645|consensus

Probab=99.15  E-value=4.9e-12  Score=92.50  Aligned_cols=88  Identities=15%  Similarity=0.076  Sum_probs=73.3

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ...||.|.|| .||.+.+..+|...|+|.|............+-+|..++..++|||+|.++++-...+.++|+||||.+
T Consensus      1240 g~~Ig~G~fG-~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1240 GNFIGGGTFG-KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred             ccccCCccee-eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence            3479999999 999999999999999999964322212234567899999999999999999988888889999999999


Q ss_pred             cchhhhhhh
Q psy16893         99 EVHVRRWTK  107 (112)
Q Consensus        99 ~~l~~~~~~  107 (112)
                      |+|.+.+..
T Consensus      1319 GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1319 GSLASLLEH 1327 (1509)
T ss_pred             CcHHHHHHh
Confidence            999887643

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.15  E-value=4.1e-10  Score=72.62  Aligned_cols=89  Identities=11%  Similarity=-0.007  Sum_probs=68.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      ...+.||+|+|| .||++....++.    .+|+|.+.... .......+.+|+.+++.+.|+|++.+.+.+... ..+++
T Consensus        10 ~~~~~lg~G~~g-~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v   86 (303)
T cd05110          10 KRVKVLGSGAFG-TVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV   86 (303)
T ss_pred             eeccccccCCCc-cEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence            455689999999 999998766665    46888775322 222334678899999999999999888866553 36789


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      +||+++|++.+.+...
T Consensus        87 ~e~~~~g~l~~~~~~~  102 (303)
T cd05110          87 TQLMPHGCLLDYVHEH  102 (303)
T ss_pred             ehhcCCCCHHHHHHhc
Confidence            9999999999887653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.14  E-value=3.7e-10  Score=74.10  Aligned_cols=88  Identities=22%  Similarity=0.101  Sum_probs=67.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC---------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT---------   85 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---------   85 (112)
                      .+.+.+.||.|+|| .||++.+..++..+++|.+....  ....+.+.+|+.+++.++|+|++.+.+.+..         
T Consensus         6 ~y~~~~~Lg~g~~g-~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           6 RYMDLRPLGCGSNG-LVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             ceEEEEEecCCCCE-EEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            34566789999999 99999999999999999885322  2334567889999999999999977654433         


Q ss_pred             -----CCceEEEEeccCCcchhhhhh
Q psy16893         86 -----TRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        86 -----~~~~~lv~e~~~~~~l~~~~~  106 (112)
                           ....|+++||+.+ +|.+.+.
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~L~~~~~  107 (342)
T cd07854          83 GSLTELNSVYIVQEYMET-DLANVLE  107 (342)
T ss_pred             ccccccceEEEEeecccc-cHHHHHH
Confidence                 2357999999985 6666554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.14  E-value=7.3e-10  Score=67.96  Aligned_cols=89  Identities=19%  Similarity=0.168  Sum_probs=73.3

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.+.|++|+++ .+|++....++..+++|.+...... ...+.+..|+..+..++|+|++.+.+.+......++++|++.
T Consensus         3 ~~~~i~~g~~~-~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        3 LGKKLGEGAFG-KVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             eeeEeecCCCe-EEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45678999999 9999998888899999998643211 145678889999999999999988887777778999999999


Q ss_pred             Ccchhhhhhhc
Q psy16893         98 GEVHVRRWTKD  108 (112)
Q Consensus        98 ~~~l~~~~~~~  108 (112)
                      +++|.+.+...
T Consensus        81 ~~~L~~~~~~~   91 (225)
T smart00221       81 GGDLFDYLRKK   91 (225)
T ss_pred             CCCHHHHHHhc
Confidence            99998887653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.13  E-value=4.8e-10  Score=71.37  Aligned_cols=89  Identities=20%  Similarity=0.094  Sum_probs=66.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC---CCCCeEeeeccCCCCCc-----
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF---KHDNVSITQHTPYTTRR-----   88 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~-----   88 (112)
                      .+.+.||+|++| .+|++....++..+|+|.+............+.+|+.++.++   .|+|++.+.+.+...+.     
T Consensus         2 ~~~~~l~~g~~~-~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           2 EELAEIGEGAYG-TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             eEEEEecccCce-EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            355789999999 999999888889999999864322222234456677766655   59999988877666554     


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      ++++|||+.+ ++.+++..
T Consensus        81 ~~l~~e~~~~-~l~~~l~~   98 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSK   98 (287)
T ss_pred             eEEEehhccc-CHHHHHHH
Confidence            8999999986 67776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG3653|consensus

Probab=99.12  E-value=2.1e-10  Score=76.90  Aligned_cols=83  Identities=13%  Similarity=0.065  Sum_probs=65.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhh--CCCCCeEeeeccCCCC----CceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF--FKHDNVSITQHTPYTT----RRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~   90 (112)
                      .+.+.+|+|.|| .||++...  ++.||||.++     ..+.+.++.|-.+...  ++|+||+++...-...    ...+
T Consensus       213 ~l~eli~~Grfg-~V~KaqL~--~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  213 QLLELIGRGRFG-CVWKAQLD--NRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             hhHHHhhcCccc-eeehhhcc--CceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            566789999999 99998754  6889999875     3445677777777664  4699999776644432    3689


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ||++|-+.|+|-++|+.
T Consensus       285 LVt~fh~kGsL~dyL~~  301 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKA  301 (534)
T ss_pred             EEeeeccCCcHHHHHHh
Confidence            99999999999999975

>KOG1035|consensus

Probab=99.12  E-value=6.7e-11  Score=86.26  Aligned_cols=67  Identities=28%  Similarity=0.260  Sum_probs=56.2

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT   85 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~   85 (112)
                      .-.+.||+|+|| .||+++++-+|+.+|+|+|+... ....-....+|+..+.+++|||+|.++..+.+
T Consensus       482 EEL~lLGkGGFG-~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  482 EELELLGKGGFG-SVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVE  548 (1351)
T ss_pred             HHHHHhcCCCCc-eEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence            344689999999 99999999999999999997543 33445678899999999999999988886655

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.10  E-value=9.3e-10  Score=70.29  Aligned_cols=80  Identities=13%  Similarity=0.098  Sum_probs=65.2

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ...+.||+|+|| .||++.+..++..+|+|.+..... ......+..|+.++.++. |+|++.+.+.+...+..+++|||
T Consensus         7 ~~~~~lg~G~~g-~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           7 KDLGEIGRGAFG-TVNKMLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HHHHHhCCCCce-EEEEEEECCCCCEEEEEEehhccC-hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            345689999999 999999998999999999864322 233456788999998886 99999988877777778999999


Q ss_pred             cCC
Q psy16893         96 RLG   98 (112)
Q Consensus        96 ~~~   98 (112)
                      +..
T Consensus        85 ~~~   87 (288)
T cd06616          85 MDI   87 (288)
T ss_pred             ccC
Confidence            875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.10  E-value=9.6e-10  Score=71.80  Aligned_cols=90  Identities=24%  Similarity=0.270  Sum_probs=67.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCC--CCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccC----CCCCc
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD--GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTP----YTTRR   88 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~--~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~----~~~~~   88 (112)
                      +.+.+.||+|+|| .||++.+..+  +..+|+|.+..........+.+.+|+.++..+. |+||+.+.+..    .....
T Consensus         2 y~~~~~lg~G~~g-~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           2 YELIKELGQGAYG-IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             ceEEEEccccCCe-EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            3456789999999 9999998877  888999998643333333466788999999985 99999776643    22356


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++++|+.+ +|.+.+..
T Consensus        81 ~~~~~e~~~~-~L~~~l~~   98 (332)
T cd07857          81 LYLYEELMEA-DLHQIIRS   98 (332)
T ss_pred             EEEEEecccC-CHHHHHhc
Confidence            7899999875 67777654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PTZ00284 protein kinase; Provisional

Probab=99.07  E-value=9.8e-10  Score=74.93  Aligned_cols=87  Identities=15%  Similarity=0.029  Sum_probs=61.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC------CCeEeeeccCCC-CCc
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH------DNVSITQHTPYT-TRR   88 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~-~~~   88 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+...   .........|+.++..+.|      .+++.+..++.. ...
T Consensus       131 y~i~~~lG~G~fg-~V~~a~~~~~~~~vAvK~i~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        131 FKILSLLGEGTFG-KVVEAWDRKRKEYCAVKIVRNV---PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             EEEEEEEEeccCE-EEEEEEEcCCCeEEEEEEEecc---hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            4566789999999 9999999888999999998532   1222344556666666654      446666665544 467


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|+++ +++|++++..
T Consensus       207 ~~iv~~~~-g~~l~~~l~~  224 (467)
T PTZ00284        207 MCIVMPKY-GPCLLDWIMK  224 (467)
T ss_pred             EEEEEecc-CCCHHHHHHH
Confidence            89999988 4567877754

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.07  E-value=8e-10  Score=72.52  Aligned_cols=87  Identities=29%  Similarity=0.321  Sum_probs=65.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+............+.+|+.+++.+.|+|++.+.+.+...      ..
T Consensus        16 ~y~~~~~ig~g~~g-~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          16 RYTSLKQVGSGAYG-SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             ceEEEEEeeecCCe-EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            34566789999999 999999888899999999864322222345678899999999999999877655432      34


Q ss_pred             eEEEEeccCCcchhh
Q psy16893         89 MYPGLTLRLGEVHVR  103 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~  103 (112)
                      .|+++||+.. ++.+
T Consensus        95 ~~lv~e~~~~-~l~~  108 (342)
T cd07879          95 FYLVMPYMQT-DLQK  108 (342)
T ss_pred             EEEEeccccc-CHHH
Confidence            6999999975 4433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG2345|consensus

Probab=99.06  E-value=2.6e-10  Score=71.21  Aligned_cols=87  Identities=17%  Similarity=0.056  Sum_probs=71.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-----CCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-----YTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-----~~~~~~~l   91 (112)
                      -+.+.||+|+|+ .|+......++..+|+|++....  ..+.+..++|++..++++|||++.+.+..     ......||
T Consensus        24 ri~~~LgeGGfs-fv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   24 RIQRLLGEGGFS-FVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             EEeeeecCCCce-eeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence            566789999999 99999999999999999996432  35567789999999999999999554422     23556899


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      +++|...|++.|.+.
T Consensus       101 l~Pyy~~Gsl~d~i~  115 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIE  115 (302)
T ss_pred             EeehhccccHHHHHH
Confidence            999999999988774

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.06  E-value=1.6e-09  Score=68.81  Aligned_cols=79  Identities=8%  Similarity=-0.135  Sum_probs=60.3

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      +|+|+|| .||++....++..+++|.+.......       .|+.....+ +|+|++.+.+.+...+..|++|||+++++
T Consensus        24 lg~g~~g-~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~   95 (267)
T PHA03390         24 LIDGKFG-KVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGD   95 (267)
T ss_pred             ecCCCce-EEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCc
Confidence            5999999 99999998899999999885321111       122222212 69999998888877778999999999999


Q ss_pred             hhhhhhhc
Q psy16893        101 HVRRWTKD  108 (112)
Q Consensus       101 l~~~~~~~  108 (112)
                      |.++++..
T Consensus        96 L~~~l~~~  103 (267)
T PHA03390         96 LFDLLKKE  103 (267)
T ss_pred             HHHHHHhc
Confidence            99988654

>KOG0608|consensus

Probab=99.06  E-value=1.5e-10  Score=80.56  Aligned_cols=88  Identities=14%  Similarity=0.002  Sum_probs=73.0

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccc-cCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNV-FQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .++.||-|+|| .|.+++...+...+|+|.+++. .........+..|-.||....++.+|.++-.+.+.+.+|+||||+
T Consensus       633 kik~iGvGAFG-eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYI  711 (1034)
T KOG0608|consen  633 KIKTIGVGAFG-EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYI  711 (1034)
T ss_pred             EEeeecccccc-eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEecc
Confidence            44689999999 9999998888889999999643 222223345667888999999999999999899988999999999


Q ss_pred             CCcchhhhhh
Q psy16893         97 LGEVHVRRWT  106 (112)
Q Consensus        97 ~~~~l~~~~~  106 (112)
                      +||+++..|.
T Consensus       712 PGGDmMSLLI  721 (1034)
T KOG0608|consen  712 PGGDMMSLLI  721 (1034)
T ss_pred             CCccHHHHHH
Confidence            9999988774

>KOG1151|consensus

Probab=99.06  E-value=1.2e-10  Score=78.19  Aligned_cols=92  Identities=15%  Similarity=-0.011  Sum_probs=71.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh-----hHHHHHHHHHHHhhCCCCCeEeeeccCC-CCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV-----SSKRVFRELKMLCFFKHDNVSITQHTPY-TTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~   88 (112)
                      .|.++..||+|+|+ .||++-+....+.||+|.-....+...     ..+...+|-++.+.+.||-||.+++++. +.+.
T Consensus       464 RYLlLhLLGrGGFS-EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFS-EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHhccccHH-HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            55778899999999 999999988888899996542222111     2345678999999999999998887654 4777


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|-|+|||+|.+|--+|+.
T Consensus       543 FCTVLEYceGNDLDFYLKQ  561 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLKQ  561 (775)
T ss_pred             ceeeeeecCCCchhHHHHh
Confidence            8999999999876655554

>PRK10345 hypothetical protein; Provisional

Probab=99.05  E-value=1.5e-09  Score=67.09  Aligned_cols=82  Identities=17%  Similarity=0.082  Sum_probs=61.2

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-----CCCCeEeeeccCCCC---CceE-
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-----KHDNVSITQHTPYTT---RRMY-   90 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~---~~~~-   90 (112)
                      +.||+|+++ .||.  +..+... ++|.+....  ......+.+|+.+++.+     .||||+.+.+.+.++   ..++ 
T Consensus         8 ~~LG~G~~~-~Vy~--hp~~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          8 SPLGTGRHR-KCYA--HPEDAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             ceecCCCce-EEEE--CCCCcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            479999999 9996  5555554 789875321  22345688999999999     579999999888774   3444 


Q ss_pred             EEEec--cCCcchhhhhhh
Q psy16893         91 PGLTL--RLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~--~~~~~l~~~~~~  107 (112)
                      +|+||  +.+++|.+.++.
T Consensus        82 ~I~e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQ  100 (210)
T ss_pred             EEecCCCCcchhHHHHHHc
Confidence            78999  557899998854

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.04  E-value=4.5e-10  Score=68.42  Aligned_cols=82  Identities=9%  Similarity=0.002  Sum_probs=54.1

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhh------------------------HHHHHHHHHHHhhCCCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVS------------------------SKRVFRELKMLCFFKHD   74 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~------------------------~~~~~~e~~~l~~l~h~   74 (112)
                      ...||+|++| .||.+... +|+.||+|.++........                        ......|++.+..+.++
T Consensus         2 ~~~ig~G~~~-~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05147           2 NGCISTGKEA-NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA   79 (190)
T ss_pred             CCccccccce-EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence            3579999999 99999886 8999999998643111000                        11234588899988877


Q ss_pred             CeEeeeccCCCCCceEEEEeccCCcchhhh
Q psy16893         75 NVSITQHTPYTTRRMYPGLTLRLGEVHVRR  104 (112)
Q Consensus        75 niv~~~~~~~~~~~~~lv~e~~~~~~l~~~  104 (112)
                      ++......... . -+++|||++++++...
T Consensus        80 ~v~~p~~~~~~-~-~~iVmE~i~g~~l~~~  107 (190)
T cd05147          80 GIPCPEPILLK-S-HVLVMEFIGDDGWAAP  107 (190)
T ss_pred             CCCCCcEEEec-C-CEEEEEEeCCCCCcch
Confidence            66432221111 2 3899999998765443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.04  E-value=5.3e-09  Score=63.05  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=69.6

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcch
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVH  101 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~l  101 (112)
                      ||+|++| .+|++....++..+++|.+...... .....+.+|+..++.+.|++++.+..........++++|++.+++|
T Consensus         1 l~~g~~~-~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFG-TVYLARDKKTGKKVAIKIIKKEDSS-SLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCce-EEEEEEecCCCcEEEEEEeccccch-hHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            5899999 9999998878899999998633211 1346788999999999999999998888777788999999998898


Q ss_pred             hhhhhh
Q psy16893        102 VRRWTK  107 (112)
Q Consensus       102 ~~~~~~  107 (112)
                      .+++..
T Consensus        79 ~~~~~~   84 (215)
T cd00180          79 KDLLKE   84 (215)
T ss_pred             HHHHHh
Confidence            887754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.04  E-value=1.8e-09  Score=67.41  Aligned_cols=75  Identities=19%  Similarity=0.037  Sum_probs=59.8

Q ss_pred             CCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcchhhh
Q psy16893         25 LSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRR  104 (112)
Q Consensus        25 g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~l~~~  104 (112)
                      |.++ .||++.+..+++.+|+|.+....       ...++...+....|||++.+.+.+...+..|++|||+++++|.++
T Consensus         4 g~~~-~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVID-KVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccc-eEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            7899 99999999999999999986421       112233444455699999999888888889999999999999888


Q ss_pred             hhh
Q psy16893        105 WTK  107 (112)
Q Consensus       105 ~~~  107 (112)
                      +..
T Consensus        76 l~~   78 (237)
T cd05576          76 ISK   78 (237)
T ss_pred             HHH
Confidence            754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.03  E-value=8.5e-10  Score=73.70  Aligned_cols=82  Identities=13%  Similarity=-0.027  Sum_probs=65.2

Q ss_pred             hhcccccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.+.+.||+|+|| .||++...  ..+..+++|.+...       ....+|+.+++.++|+||+.+...+.....+|++|
T Consensus        94 y~i~~~Lg~G~~g-~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         94 YNILSSLTPGSEG-EVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             eEEEEeecCCCCe-EEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            5677899999999 99998643  34577999987421       23457999999999999999888777778899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      |++.+ ++++++.
T Consensus       166 e~~~~-~l~~~l~  177 (392)
T PHA03207        166 PKYKC-DLFTYVD  177 (392)
T ss_pred             hhcCC-CHHHHHH
Confidence            99975 6777763

>KOG1152|consensus

Probab=99.02  E-value=5e-10  Score=77.01  Aligned_cols=90  Identities=12%  Similarity=0.017  Sum_probs=70.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh------hhHHHHHHHHHHHhhCC---CCCeEeeeccCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL------VSSKRVFRELKMLCFFK---HDNVSITQHTPYTT   86 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~------~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~   86 (112)
                      +..++.+|+|+|| .|+.|.+++..-.|++|.|.+...-.      .....+-.|+.+|.+++   |+||+.+.++++++
T Consensus       563 yttlq~lG~GAyG-kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  563 YTTLQPLGEGAYG-KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             ceeeeeccccccc-eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            4456789999999 99999999888899999997542111      01123567999999998   99999999999999


Q ss_pred             CceEEEEecc-CCcchhhhhh
Q psy16893         87 RRMYPGLTLR-LGEVHVRRWT  106 (112)
Q Consensus        87 ~~~~lv~e~~-~~~~l~~~~~  106 (112)
                      +..||+||-- +|-.||+++.
T Consensus       642 d~yyl~te~hg~gIDLFd~IE  662 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIE  662 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhh
Confidence            9999999943 3445777764

>KOG0695|consensus

Probab=99.01  E-value=3.5e-10  Score=73.82  Aligned_cols=92  Identities=12%  Similarity=-0.020  Sum_probs=74.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+-++.+||+|+|+ .|..+...++.+.+|+|.+.+.. +.......++.|-.+.... +||.+|-+.+.+.....+++|
T Consensus       251 df~ll~vigrgsya-kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  251 DFDLLRVIGRGSYA-KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             cceeeeeecCcchh-hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            34567899999999 89888999999999999997654 3333445667777766655 499999999988888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      .||++||.|+-.+..
T Consensus       330 ieyv~ggdlmfhmqr  344 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQR  344 (593)
T ss_pred             EEEecCcceeeehhh
Confidence            999999999876654

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.01  E-value=2.9e-09  Score=68.43  Aligned_cols=87  Identities=13%  Similarity=0.048  Sum_probs=66.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|++| .||++....++..+|+|.+.... .......+..|+.++.... |+|++.+.+.+......|++|
T Consensus        16 ~~~~~~~lg~g~~~-~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          16 DLENLGEIGSGTCG-QVYKMRFKKTGHVMAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             hheeeeEeeccCCe-EEEEEEECCCCeEEEEEEEeccC-ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            45677899999999 99999988889999999985432 1223355666777666665 999999988888888899999


Q ss_pred             eccCCcchhhh
Q psy16893         94 TLRLGEVHVRR  104 (112)
Q Consensus        94 e~~~~~~l~~~  104 (112)
                      ||+.+ .+.+.
T Consensus        94 e~~~~-~l~~l  103 (296)
T cd06618          94 ELMST-CLDKL  103 (296)
T ss_pred             eccCc-CHHHH
Confidence            99865 44443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0200|consensus

Probab=99.01  E-value=1.7e-09  Score=76.06  Aligned_cols=91  Identities=16%  Similarity=0.017  Sum_probs=73.7

Q ss_pred             hcccccccCCcceEEEEEEcC---C----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP---R----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRR   88 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~---~----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~   88 (112)
                      .+.+.||+|.|| .|+++...   .    ....||+|.+.... ...+.+.+..|+.+|+.+. |+|++.+.+.+.....
T Consensus       299 ~~~~~lg~g~fG-~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~-~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  299 KLGKYLGEGAFG-QVVKALLFGLSKALLSIYVTVAVKMLKENA-SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             cccceeeccccc-ceEeEEEeecccccccceEEEEEEeccccc-CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            455689999999 88887522   1    14569999986433 3355678999999999997 9999999998888888


Q ss_pred             eEEEEeccCCcchhhhhhhcC
Q psy16893         89 MYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      +++++||+..|.|.++++..+
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhcc
Confidence            999999999999999998765

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.94  E-value=3.4e-09  Score=64.46  Aligned_cols=81  Identities=11%  Similarity=-0.002  Sum_probs=55.6

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh------------------------hHHHHHHHHHHHhhCCCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV------------------------SSKRVFRELKMLCFFKHD   74 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~------------------------~~~~~~~e~~~l~~l~h~   74 (112)
                      ...||+|++| .||++.+. +|+.||+|.++.......                        .......|...+.++.|+
T Consensus         2 ~~~ig~G~~~-~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           2 NGCISTGKEA-NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CceeecCCCc-EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            4579999999 99999876 899999999864311100                        012245788889999888


Q ss_pred             CeEeeeccCCCCCceEEEEeccCCcchhh
Q psy16893         75 NVSITQHTPYTTRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        75 niv~~~~~~~~~~~~~lv~e~~~~~~l~~  103 (112)
                      ++..........  .|++|||++|+++..
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~  106 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPA  106 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchh
Confidence            875333322222  389999999875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.92  E-value=1.9e-09  Score=74.27  Aligned_cols=90  Identities=8%  Similarity=-0.104  Sum_probs=61.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-CeEEEEEc--------------ccc-cCChhhHHHHHHHHHHHhhCCCCCeEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-RRVALKKL--------------PNV-FQSLVSSKRVFRELKMLCFFKHDNVSI   78 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-~~va~k~i--------------~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~   78 (112)
                      .|.+.+.||+|+|| .||++..+... ...+.|.+              .+. .........+.+|+.++..++|+||+.
T Consensus       149 ~Y~ii~~LG~G~fG-~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        149 HFRVIDDLPAGAFG-KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             ccEEEeEecCCCCc-ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            45677899999999 99988653322 11222211              000 111123455789999999999999999


Q ss_pred             eeccCCCCCceEEEEeccCCcchhhhhh
Q psy16893         79 TQHTPYTTRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        79 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~  106 (112)
                      +.+++...+..|++++++.+ ++++++.
T Consensus       228 l~~~~~~~~~~~lv~e~~~~-~l~~~l~  254 (501)
T PHA03210        228 IEEILRSEANTYMITQKYDF-DLYSFMY  254 (501)
T ss_pred             EeEEEEECCeeEEEEecccc-CHHHHHh
Confidence            99888888889999999865 5666654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.88  E-value=8.5e-09  Score=63.35  Aligned_cols=84  Identities=10%  Similarity=-0.052  Sum_probs=60.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccC-Ch-----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SL-----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      +.||+|++| .||++..  .+..+++|....... ..     .....+.+|+.++..+.|+++..+...+...+..+++|
T Consensus         2 ~~l~~G~~~-~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEA-EIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceE-EEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence            578999999 9999876  466789997642211 11     11245778999999999988875554444445678999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||++|++|.+.+.
T Consensus        79 e~~~G~~L~~~~~   91 (211)
T PRK14879         79 EYIEGEPLKDLIN   91 (211)
T ss_pred             EEeCCcCHHHHHH
Confidence            9999999887664

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.86  E-value=2.2e-08  Score=61.84  Aligned_cols=80  Identities=21%  Similarity=0.218  Sum_probs=65.3

Q ss_pred             CcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCcchhhhh
Q psy16893         26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        26 ~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~l~~~~  105 (112)
                      +|| .+|++....++..+++|.+...... ...+.+.+|++.++.++|+|++.+.+.+......++++||+.+++|.+.+
T Consensus         1 ~~g-~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFG-KVYLARDKKTGKLVAIKVIKKEKIK-KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             Cce-EEEEEEECCCCcEEEEEEecccccc-cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            477 8999998888899999998543211 11567889999999999999998888777777889999999998988877


Q ss_pred             hh
Q psy16893        106 TK  107 (112)
Q Consensus       106 ~~  107 (112)
                      ..
T Consensus        79 ~~   80 (244)
T smart00220       79 KK   80 (244)
T ss_pred             Hh
Confidence            54

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.84  E-value=1.4e-08  Score=70.07  Aligned_cols=93  Identities=14%  Similarity=-0.002  Sum_probs=60.3

Q ss_pred             hhhcccccccCCcceEEEEEEcC----------------CCCCeEEEEEcccccCCh------------hhHHHHHHHHH
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP----------------RDGRRVALKKLPNVFQSL------------VSSKRVFRELK   66 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~----------------~~~~~va~k~i~~~~~~~------------~~~~~~~~e~~   66 (112)
                      .+.+.+.||+|+|| .||++...                ..++.||+|.+.......            ...+....|+.
T Consensus       146 ~F~i~~~LG~GgFG-~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        146 DFQLRDKLGGGNFG-ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             CceEeeEeecCCCe-EEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            55677899999999 99998531                234579999985321100            01122344666


Q ss_pred             HHhhCCCCCeE-----eeeccCC--------CCCceEEEEeccCCcchhhhhhhc
Q psy16893         67 MLCFFKHDNVS-----ITQHTPY--------TTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        67 ~l~~l~h~niv-----~~~~~~~--------~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++..++|.+++     .+.+++.        .....|||+||+++++|.+.+...
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            77777776653     2222221        234579999999999999988653

>KOG1290|consensus

Probab=98.84  E-value=1.4e-08  Score=68.73  Aligned_cols=86  Identities=14%  Similarity=0.084  Sum_probs=67.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-C-------CCeEeeeccCC----
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-H-------DNVSITQHTPY----   84 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h-------~niv~~~~~~~----   84 (112)
                      .+.++||.|.|+ +||+|.+....+.||+|+.+.   .....+..+.|+++|+.++ +       .+||.+.+.+.    
T Consensus        81 ~v~rKLGWGHFS-TVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   81 HVQRKLGWGHFS-TVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             EEEEeccccccc-eeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            566799999999 999999999999999998852   2344677889999998775 2       35777777553    


Q ss_pred             CCCceEEEEeccCCcchhhhhhh
Q psy16893         85 TTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        85 ~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...++++|+|++. ..|+..|+.
T Consensus       157 NG~HVCMVfEvLG-dnLLklI~~  178 (590)
T KOG1290|consen  157 NGQHVCMVFEVLG-DNLLKLIKY  178 (590)
T ss_pred             CCcEEEEEehhhh-hHHHHHHHH
Confidence            3568999999885 568887754

>KOG0986|consensus

Probab=98.80  E-value=2.5e-09  Score=71.85  Aligned_cols=90  Identities=17%  Similarity=-0.026  Sum_probs=72.3

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ..-++||.|+|| .|+.|..+.+|.-+|.|++.+-.. ......-.+.|-.+|.+++.+.||.+...+++.+.++||+..
T Consensus       188 ~~~RvlGkGGFG-EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtl  266 (591)
T KOG0986|consen  188 RVYRVLGKGGFG-EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTL  266 (591)
T ss_pred             eeeEEEeccccc-ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEe
Confidence            455689999999 999999999999999998843211 111112357888999999999999999889999999999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      |+||+|--.|.+
T Consensus       267 MNGGDLkfHiyn  278 (591)
T KOG0986|consen  267 MNGGDLKFHIYN  278 (591)
T ss_pred             ecCCceeEEeec
Confidence            999998665544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.77  E-value=2.7e-08  Score=60.64  Aligned_cols=83  Identities=8%  Similarity=-0.068  Sum_probs=57.7

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEccccc-CCh-----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSL-----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .||+|++| .||++..  .+..+++|...... ...     ....++.+|+.++..+.|+++..+.......+..+++||
T Consensus         1 ~ig~G~~~-~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEA-IIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceE-EEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence            37999999 9999984  46678999753221 111     113557789999999988776543333334445689999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |++|+++.+.+.
T Consensus        78 ~~~g~~l~~~~~   89 (199)
T TIGR03724        78 YIEGKPLKDVIE   89 (199)
T ss_pred             EECCccHHHHHh
Confidence            999999887664

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0696|consensus

Probab=98.76  E-value=1.4e-09  Score=72.68  Aligned_cols=90  Identities=13%  Similarity=-0.025  Sum_probs=68.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh-hHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV-SSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      -.+.+||.|+|| .|..+..+.+.+.+|+|.+.++..-+. ..+--+.|-++|.... -|.++++.+.+..-+.+|+|||
T Consensus       352 nFl~VlGKGSFG-KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVME  430 (683)
T KOG0696|consen  352 NFLMVLGKGSFG-KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVME  430 (683)
T ss_pred             ceEEEeccCccc-eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEE
Confidence            345689999999 999999888999999999976542221 1233345666776555 5666788888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.||.|+=.+.+
T Consensus       431 yvnGGDLMyhiQQ  443 (683)
T KOG0696|consen  431 YVNGGDLMYHIQQ  443 (683)
T ss_pred             EecCchhhhHHHH
Confidence            9999999877753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.76  E-value=3.6e-08  Score=61.68  Aligned_cols=85  Identities=7%  Similarity=-0.107  Sum_probs=61.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhh-HHH------HHHHHHHHhhCCCCCeEeeeccCCC----
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVS-SKR------VFRELKMLCFFKHDNVSITQHTPYT----   85 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~-~~~------~~~e~~~l~~l~h~niv~~~~~~~~----   85 (112)
                      ...+++++|.|| .||....  ++..+|+|.+......... .+.      +.+|+..+.++.|+++..+......    
T Consensus        34 ~~~~~l~~~~f~-~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~  110 (232)
T PRK10359         34 KTIKVFRNIDDT-KVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK  110 (232)
T ss_pred             EEEEEecCCCce-EEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence            566789999999 9998655  3567999998643322221 222      5789899999999999966554321    


Q ss_pred             ----CCceEEEEeccCCcchhhh
Q psy16893         86 ----TRRMYPGLTLRLGEVHVRR  104 (112)
Q Consensus        86 ----~~~~~lv~e~~~~~~l~~~  104 (112)
                          ....+|+|||++|.+|.+.
T Consensus       111 ~~~~~~~~~lvmEyi~G~tL~~~  133 (232)
T PRK10359        111 TLRYAHTYIMLIEYIEGVELNDM  133 (232)
T ss_pred             cccccCCeEEEEEEECCccHHHh
Confidence                2457999999999887554

>KOG0669|consensus

Probab=98.75  E-value=1.5e-10  Score=72.81  Aligned_cols=89  Identities=20%  Similarity=0.151  Sum_probs=65.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--------C
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--------T   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~   86 (112)
                      .+.-...+|+|.|| .|+++..+.+++.||+|.+-.+.....-....++|+++|..++|+|++.+.+.|..        .
T Consensus        18 ~yek~~kigqGtfg-eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFG-EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             HHHHHHhcCCchHH-HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            44445689999999 99999999999999998774222222223556889999999999999955443322        2


Q ss_pred             CceEEEEeccCCcchhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~  105 (112)
                      ..+|+|+++|+.+ |+..+
T Consensus        97 ~t~ylVf~~cehD-LaGlL  114 (376)
T KOG0669|consen   97 ATFYLVFDFCEHD-LAGLL  114 (376)
T ss_pred             ceeeeeHHHhhhh-HHHHh
Confidence            4589999999974 55544

>KOG0671|consensus

Probab=98.74  E-value=1.6e-08  Score=66.50  Aligned_cols=88  Identities=15%  Similarity=-0.006  Sum_probs=68.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC--C---C-eEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH--D---N-VSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h--~---n-iv~~~~~~~~~~~~   89 (112)
                      +.+++.+|+|.|| .|..|.+..++..||+|.++..   .......+.|+.++.++.+  |   | +|++.+++.-.+++
T Consensus        91 y~i~~~lGeGtFG-kV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   91 YEIVDLLGEGTFG-KVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             eehhhhhcCCccc-ceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            4677899999999 9999999888899999988632   2334566789999999842  2   2 23667777778889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|+|.+. .+++|+++.+
T Consensus       167 CivfellG-~S~~dFlk~N  184 (415)
T KOG0671|consen  167 CIVFELLG-LSTFDFLKEN  184 (415)
T ss_pred             EEEEeccC-hhHHHHhccC
Confidence            99999885 4689999863

>KOG0668|consensus

Probab=98.72  E-value=1e-08  Score=63.89  Aligned_cols=83  Identities=14%  Similarity=0.103  Sum_probs=67.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCC--CCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYT--TRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~l   91 (112)
                      .+.+.+.+|+|.|+ .|+.+.+..+++.+++|.+.     +...+.+.+|+.+|..+. ||||+.+.+...+  +....|
T Consensus        39 dYeivrk~GRGKYS-EVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   39 DYEIVRKVGRGKYS-EVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             hHHHHHHHcCccHh-hHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            55677899999999 99999988888999999884     234567889999999998 9999999887766  455689


Q ss_pred             EEeccCCcchhhh
Q psy16893         92 GLTLRLGEVHVRR  104 (112)
Q Consensus        92 v~e~~~~~~l~~~  104 (112)
                      ++||..+- .|..
T Consensus       113 iFE~v~n~-Dfk~  124 (338)
T KOG0668|consen  113 IFEYVNNT-DFKQ  124 (338)
T ss_pred             Hhhhhccc-cHHH
Confidence            99999874 3443

>KOG0596|consensus

Probab=98.71  E-value=4.6e-08  Score=67.21  Aligned_cols=92  Identities=16%  Similarity=0.049  Sum_probs=71.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||.|+-+ .||+...... +.+|+|++.....+......+.+|+..|.+++ |.+||++.++-..++.+|+||
T Consensus       362 ~Yeilk~iG~GGSS-kV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  362 EYEILKQIGSGGSS-KVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             hhhHHHhhcCCCcc-eeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            44567799999999 9999876543 45777777544445566788999999999997 999999998777789999999


Q ss_pred             eccCCcchhhhhhhcC
Q psy16893         94 TLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~  109 (112)
                      |+=+. +|...|++..
T Consensus       440 E~Gd~-DL~kiL~k~~  454 (677)
T KOG0596|consen  440 ECGDI-DLNKILKKKK  454 (677)
T ss_pred             ecccc-cHHHHHHhcc
Confidence            97665 3666665543

>KOG0664|consensus

Probab=98.68  E-value=9.8e-10  Score=69.98  Aligned_cols=86  Identities=43%  Similarity=0.570  Sum_probs=67.3

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCceEEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRMYPG   92 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv   92 (112)
                      -.+.||-|+|| .||...+.+++++|++|++.+.+.+-.+.+++.+|+++|+.++|.|++...+....     +..+|++
T Consensus        57 PDRPIGYGAFG-VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   57 PDRPIGYGAFG-VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCccccccee-EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            34578999999 99999999999999999997666555667889999999999999999955443322     4567888


Q ss_pred             EeccCCcchhhhh
Q psy16893         93 LTLRLGEVHVRRW  105 (112)
Q Consensus        93 ~e~~~~~~l~~~~  105 (112)
                      .|+|..+ |.+.+
T Consensus       136 TELmQSD-LHKII  147 (449)
T KOG0664|consen  136 TELMQSD-LHKII  147 (449)
T ss_pred             HHHHHhh-hhhee
Confidence            8888753 44433

>smart00090 RIO RIO-like kinase

Probab=98.62  E-value=1.2e-07  Score=59.61  Aligned_cols=87  Identities=11%  Similarity=-0.042  Sum_probs=57.8

Q ss_pred             hhcccccccCCcceEEEEEE-cCCCCCeEEEEEcccccCC--------------------hh--hHHHHHHHHHHHhhCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVT-DPRDGRRVALKKLPNVFQS--------------------LV--SSKRVFRELKMLCFFK   72 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~-~~~~~~~va~k~i~~~~~~--------------------~~--~~~~~~~e~~~l~~l~   72 (112)
                      +.+.+.||+|++| .||++. +..+++.||+|.+......                    ..  ....+..|+..+..+.
T Consensus        30 ~~i~~~Lg~G~~g-~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       30 SAIGGCISTGKEA-NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             HHhCCeeccCcce-eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4577899999999 999998 6678999999988632110                    00  0123567999998887


Q ss_pred             CCCeEeeeccCCCCCceEEEEeccCCcchhhhh
Q psy16893         73 HDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        73 h~niv~~~~~~~~~~~~~lv~e~~~~~~l~~~~  105 (112)
                      +.++..+... .. ...++||||++++++.+..
T Consensus       109 ~~~i~~p~~~-~~-~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPI-AW-RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeee-Ee-cCceEEEEEecCCcccccc
Confidence            5433221111 11 2248999999998775543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.62  E-value=2.8e-07  Score=64.17  Aligned_cols=87  Identities=10%  Similarity=0.031  Sum_probs=58.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEc-ccccCC-----hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKL-PNVFQS-----LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i-~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      ...+.||+|+|| .||++......  +++|.. ......     .....++.+|+.++..++|++++.+..........+
T Consensus       336 ~~~~~iG~G~~g-~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        336 IPDHLIGKGAEA-DIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             CccceeccCCcE-EEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            345689999999 99998764333  344332 111111     112356789999999999999886544444444568


Q ss_pred             EEEeccCCcchhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWT  106 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~  106 (112)
                      ++|||+++++|.+.+.
T Consensus       413 lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE  428 (535)
T ss_pred             EEEEecCCCcHHHHHH
Confidence            9999999999887663

>KOG0603|consensus

Probab=98.60  E-value=6.1e-08  Score=67.13  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=68.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHh-hCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLC-FFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+...+|.|+|+ .+-.|.+..+++..++|.+.....      ....|+.++. ..+|+|++.+.+.+.+..++|+|||
T Consensus       324 y~~~~~~~~gs~s-~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  324 YEFREELGEGSFS-AVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             hccccccCCCCcc-ceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            3455569999999 988899999999999999864311      1233554443 4469999999999999999999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      .+.|+.+++++.+.
T Consensus       397 ~l~g~ell~ri~~~  410 (612)
T KOG0603|consen  397 LLDGGELLRRIRSK  410 (612)
T ss_pred             hccccHHHHHHHhc
Confidence            99999999998764

>KOG1006|consensus

Probab=98.60  E-value=2.2e-08  Score=63.57  Aligned_cols=82  Identities=13%  Similarity=0.126  Sum_probs=64.0

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHH-HhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKM-LCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ..||+|+|| .|.+-.++++|+..|||+|+.. +...+.++++.|... ++.-+-||||++++.....+..|+-||+|..
T Consensus        70 g~iG~G~fG-~V~KM~hk~sg~~mAVKrIr~~-n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~  147 (361)
T KOG1006|consen   70 GEIGNGAFG-TVNKMLHKPSGKLMAVKRIRSN-NIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI  147 (361)
T ss_pred             HHhcCCcch-hhhhhhcCccCcEEEEEEeeec-cchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence            478999999 9999999999999999999743 334556788888874 4444589999888876666668899999975


Q ss_pred             cchhhhh
Q psy16893         99 EVHVRRW  105 (112)
Q Consensus        99 ~~l~~~~  105 (112)
                        .+|++
T Consensus       148 --SlDkl  152 (361)
T KOG1006|consen  148 --SLDKL  152 (361)
T ss_pred             --hHHHH
Confidence              35554

>KOG1345|consensus

Probab=98.58  E-value=7.1e-08  Score=61.51  Aligned_cols=87  Identities=13%  Similarity=0.074  Sum_probs=67.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeee-ccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQ-HTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~-~~~~~~~~~~lv   92 (112)
                      -+.+.+.+|+|.|| .+..+.++.+..++++|.++++.   .....+.+|..---.|. |.||+..+ ..+...+...++
T Consensus        25 ~y~I~k~lgeG~Fg-kIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   25 VYTINKQLGEGRFG-KILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhHHHHhccccee-eEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            44677889999999 99999999999999999987532   23467888876544555 99999544 456667777889


Q ss_pred             EeccCCcchhhhh
Q psy16893         93 LTLRLGEVHVRRW  105 (112)
Q Consensus        93 ~e~~~~~~l~~~~  105 (112)
                      +||++.|+|-+-+
T Consensus       101 qE~aP~gdL~snv  113 (378)
T KOG1345|consen  101 QEFAPRGDLRSNV  113 (378)
T ss_pred             eccCccchhhhhc
Confidence            9999999875544

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.47  E-value=8.1e-07  Score=62.31  Aligned_cols=87  Identities=7%  Similarity=-0.081  Sum_probs=54.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC----CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEee----ec-c-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD----GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSIT----QH-T-PY   84 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~----~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~----~~-~-~~   84 (112)
                      .+.+.+.||+|+|| .||++....+    +..+|+|.+....    ..+....+  .+....+.++..+    .. . ..
T Consensus       133 ~y~l~~~LG~G~FG-~VYka~~~~~~~~~~~~vAvK~~~~~~----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        133 DFVLGKKLGEGAFG-VVYKASLVNKQSKKEGKYVLKKATEYG----AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             CeEEeEEEeeCCCe-EEEEEEEcCCccccCcEEEEEEecccc----hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            45677899999999 9999998887    8899999875321    11111111  1111122222211    11 1 23


Q ss_pred             CCCceEEEEeccCCcchhhhhhhc
Q psy16893         85 TTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        85 ~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .....++++||+.+++|.+.+...
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            456789999999999998887643

>KOG1027|consensus

Probab=98.46  E-value=3e-07  Score=65.69  Aligned_cols=82  Identities=22%  Similarity=0.092  Sum_probs=66.3

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      -.+++|.|+-|..||++...  ++.||||.+-.+     ......+|+..|+.-. |||||.++..-.+....|+..|.|
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeC--CceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            34578999999789998875  778999987422     2245678999998876 999999998888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      .. +|.|.+..
T Consensus       586 ~~-sL~dlie~  595 (903)
T KOG1027|consen  586 AC-SLQDLIES  595 (903)
T ss_pred             hh-hHHHHHhc
Confidence            87 68887765

>KOG1167|consensus

Probab=98.44  E-value=1.4e-07  Score=62.60  Aligned_cols=85  Identities=24%  Similarity=0.171  Sum_probs=69.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCC---CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~   90 (112)
                      .+..+..||+|+|+ .||++....   ....||+|.+...    ....++..|+.+|..+. +.|++.+.......+++.
T Consensus        37 ~~~~v~kigeGsFs-sv~~a~~~~~~~~~~~valk~i~~t----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   37 AYKVVNKIGEGSFS-SVYKATDIEQDTKRRYVALKAIYRT----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhccccccchh-hhhhhhHhhhccccceEeeeecccc----cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            44677899999999 999987665   6778999999532    22356889999999987 999999998888889999


Q ss_pred             EEEeccCCcchhhh
Q psy16893         91 PGLTLRLGEVHVRR  104 (112)
Q Consensus        91 lv~e~~~~~~l~~~  104 (112)
                      +|+||++...--+.
T Consensus       112 ivlp~~~H~~f~~l  125 (418)
T KOG1167|consen  112 IVLPYFEHDRFRDL  125 (418)
T ss_pred             EEecccCccCHHHH
Confidence            99999998664443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.42  E-value=1e-06  Score=53.79  Aligned_cols=82  Identities=21%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh--------------------hHHHHHHHHHHHhhCCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV--------------------SSKRVFRELKMLCFFKHDN   75 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~n   75 (112)
                      +.+.+.||+|+|| .||++... +++.+|+|.++.......                    .......|..++..+.|++
T Consensus        17 ~~~~~~i~~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (198)
T cd05144          17 ESLGNQIGVGKES-DVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG   94 (198)
T ss_pred             hhcCCccccCcce-EEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence            4556789999999 99998764 788999998653210000                    0122567888888887775


Q ss_pred             eE--eeeccCCCCCceEEEEeccCCcchhh
Q psy16893         76 VS--ITQHTPYTTRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        76 iv--~~~~~~~~~~~~~lv~e~~~~~~l~~  103 (112)
                      +.  ....    ....+++|||++++++.+
T Consensus        95 i~v~~~~~----~~~~~lv~e~~~g~~L~~  120 (198)
T cd05144          95 FPVPKPID----WNRHAVVMEYIDGVELYR  120 (198)
T ss_pred             CCCCceee----cCCceEEEEEeCCcchhh
Confidence            32  2222    234589999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1163|consensus

Probab=98.38  E-value=1.6e-06  Score=54.76  Aligned_cols=85  Identities=12%  Similarity=0.032  Sum_probs=60.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC-CeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD-NVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+++.||+|+|| .+|.+.+..+|..||+|.-.....    ...+..|.++.+.+++. .|.....+..+.+.-.+||
T Consensus        16 ky~lvrkiGsGSFG-dIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFG-DIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             ceEEEEeecCCchh-heeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            55788999999999 999999999999999997532211    23456788888888754 3444554555555568999


Q ss_pred             eccCCcchhhhh
Q psy16893         94 TLRLGEVHVRRW  105 (112)
Q Consensus        94 e~~~~~~l~~~~  105 (112)
                      |++. .+|.+..
T Consensus        91 dLLG-PsLEdLf  101 (341)
T KOG1163|consen   91 DLLG-PSLEDLF  101 (341)
T ss_pred             eccC-ccHHHHH
Confidence            9774 5665543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.34  E-value=3.2e-06  Score=48.61  Aligned_cols=77  Identities=14%  Similarity=-0.032  Sum_probs=56.8

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC--CCeEeeeccCCCCCceEEEEecc
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH--DNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ++.+++|.++ .+|++....  ..+++|.......    ...+..|+..+..+.|  .+++.+.......+..++++||+
T Consensus         3 ~~~i~~g~~~-~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           3 IKLLKGGLTN-RVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             ceeccccccc-ceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            4678999999 999988643  6799998753221    3457788888888875  46666666555556789999999


Q ss_pred             CCcchh
Q psy16893         97 LGEVHV  102 (112)
Q Consensus        97 ~~~~l~  102 (112)
                      .++.+.
T Consensus        76 ~g~~~~   81 (155)
T cd05120          76 EGETLD   81 (155)
T ss_pred             CCeecc
Confidence            987664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.33  E-value=2e-06  Score=51.86  Aligned_cols=30  Identities=27%  Similarity=0.243  Sum_probs=25.6

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEccc
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPN   50 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~   50 (112)
                      .+.||+|+|| .||++... +++.||+|.+..
T Consensus         2 ~~~lg~G~~g-~Vy~a~~~-~~~~vavKv~~~   31 (187)
T cd05119           2 GGPIGTGKEA-DVYLALDG-DGEPVAVKIYRT   31 (187)
T ss_pred             Ccccccccce-eEEEEECC-CCCEEEEEEEec
Confidence            4578999999 99999876 788999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0670|consensus

Probab=98.17  E-value=1.5e-06  Score=59.88  Aligned_cols=84  Identities=14%  Similarity=0.030  Sum_probs=63.9

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC------CCCeEeeeccCCCCCceEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK------HDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~~~~l   91 (112)
                      +....|+|-|+ .|..|.+...++.||+|.|+   ++....+.-+.|+.+|++|+      .-+.+.+...+...+++||
T Consensus       436 V~~~~GkGvFs-~Vvra~D~~r~~~vAiKIIR---nNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl  511 (752)
T KOG0670|consen  436 VQGYTGKGVFS-TVVRARDQARGQEVAIKIIR---NNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL  511 (752)
T ss_pred             EEeccccceee-eeeeccccCCCCeeEEEEee---cchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence            44567999999 99999999899999999996   34455566788999999986      2455667777777789999


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      |+|-+.= .|-+.|+
T Consensus       512 VFE~Lsl-NLRevLK  525 (752)
T KOG0670|consen  512 VFEPLSL-NLREVLK  525 (752)
T ss_pred             Eehhhhc-hHHHHHH
Confidence            9996642 3555444

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.14  E-value=3.4e-05  Score=49.04  Aligned_cols=87  Identities=22%  Similarity=0.198  Sum_probs=67.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh-hHHHHHHHHHHHhhCCCC-CeEeeeccCCCCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV-SSKRVFRELKMLCFFKHD-NVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~-~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.||.|+|+ .||.+...   ..+++|.+........ ....+.+|+..+..+.|+ +++.+...+......+++++
T Consensus         3 ~~~~~l~~g~~~-~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           3 RILRKLGEGSFG-EVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             eeEEeecCCCCe-EEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            345678999998 99998876   6789998864433322 456788999999999988 69988777766666899999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      ++.++.+.+.+..
T Consensus        79 ~~~~~~l~~~~~~   91 (384)
T COG0515          79 YVDGGSLEDLLKK   91 (384)
T ss_pred             cCCCCcHHHHHHh
Confidence            9999998866554

>KOG0983|consensus

Probab=98.13  E-value=1.7e-06  Score=55.43  Aligned_cols=78  Identities=13%  Similarity=0.065  Sum_probs=64.6

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+..||+|+.| .|+++..++++...|||.+++.. +....++++..+.++.... -|.||.+.+++..+..+++-||.|
T Consensus        96 ~l~dlGsGtcG-~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   96 NLGDLGSGTCG-QVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hHHhhcCCCcc-ceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            44578999999 99999999999999999997654 3455688888998776655 799999999888777788889987


Q ss_pred             C
Q psy16893         97 L   97 (112)
Q Consensus        97 ~   97 (112)
                      .
T Consensus       174 s  174 (391)
T KOG0983|consen  174 S  174 (391)
T ss_pred             H
Confidence            5

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.09  E-value=3.2e-05  Score=48.03  Aligned_cols=81  Identities=12%  Similarity=-0.044  Sum_probs=54.7

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC--hhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS--LVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      ....|+++.|| .|+....  .+..++.+.+....-.  ......+.+|+++|.++. |++++.+.+.    +..+++||
T Consensus         6 ~~~~l~~~~f~-~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          6 VNEPLKSDTFG-RILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             cceeecCCCcc-eEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            44579999999 9986543  5666776666422110  111224778999999996 4667766553    33699999


Q ss_pred             ccCCcchhhhh
Q psy16893         95 LRLGEVHVRRW  105 (112)
Q Consensus        95 ~~~~~~l~~~~  105 (112)
                      |+.|.+|.+.+
T Consensus        79 yI~G~~L~~~~   89 (218)
T PRK12274         79 YLAGAAMYQRP   89 (218)
T ss_pred             eecCccHHhhh
Confidence            99998876543

>KOG0984|consensus

Probab=98.09  E-value=9.6e-06  Score=50.20  Aligned_cols=78  Identities=13%  Similarity=0.148  Sum_probs=62.5

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhh-CCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF-FKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ..||+|+|| .+-+-++..+|...|+|.++...+ +.+.++.++|+.+..+ ..-|..|.+++.......+|+.||.|..
T Consensus        52 ~elGrGayG-~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t  129 (282)
T KOG0984|consen   52 EELGRGAYG-VVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT  129 (282)
T ss_pred             hhhcCCccc-hhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence            469999999 888888888999999999975544 4455677889875544 4578999988877777779999999976


Q ss_pred             c
Q psy16893         99 E   99 (112)
Q Consensus        99 ~   99 (112)
                      +
T Consensus       130 S  130 (282)
T KOG0984|consen  130 S  130 (282)
T ss_pred             h
Confidence            3

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.03  E-value=5.6e-06  Score=57.72  Aligned_cols=29  Identities=28%  Similarity=0.305  Sum_probs=26.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLP   49 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~   49 (112)
                      +.+|+|++| .|+++....+|+.||+|+++
T Consensus       125 ~PlasaSia-QVh~A~l~~~G~~VAVKV~r  153 (537)
T PRK04750        125 KPLASASIA-QVHFARLKDNGREVVVKVLR  153 (537)
T ss_pred             hhhcCCCcc-EEEEEEECCCCCEEEEEEeC
Confidence            479999999 99999987779999999986

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.96  E-value=4.2e-05  Score=52.31  Aligned_cols=28  Identities=32%  Similarity=0.367  Sum_probs=24.1

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLP   49 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~   49 (112)
                      +.|++|++| .||++.. ++|+.||||..+
T Consensus       123 ~plasaSig-QVh~A~l-~~G~~VaVKv~r  150 (437)
T TIGR01982       123 KPLAAASIA-QVHRARL-VDGKEVAVKVLR  150 (437)
T ss_pred             cceeeeehh-heEEEEe-cCCCEEEEEeeC
Confidence            469999999 9999975 478999999885

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1165|consensus

Probab=97.92  E-value=1.9e-05  Score=51.98  Aligned_cols=84  Identities=10%  Similarity=-0.045  Sum_probs=61.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .++.+.+.-+++.||+|--+...    .+..+..|-+..+.|. -++|...+-+.....+-.||+
T Consensus        29 hyrVGkKIGeGsFG-~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFG-VLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             cceeccccccCcce-eeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            66888999999999 99999999999999999654322    2344566777777665 566666655555555568999


Q ss_pred             eccCCcchhhh
Q psy16893         94 TLRLGEVHVRR  104 (112)
Q Consensus        94 e~~~~~~l~~~  104 (112)
                      |++. .+|.|.
T Consensus       104 dLLG-PSLEDL  113 (449)
T KOG1165|consen  104 DLLG-PSLEDL  113 (449)
T ss_pred             hhhC-cCHHHH
Confidence            9775 455544

>KOG0614|consensus

Probab=97.92  E-value=7.5e-07  Score=61.20  Aligned_cols=90  Identities=17%  Similarity=0.093  Sum_probs=70.8

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ..+..||=|+|| .|-..........+|+|.+++.. ....+.+.+..|-.+|-.++.+.||.++..+.++..+|.+||-
T Consensus       423 ~~iaTLGvGgFG-RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  423 KRIATLGVGGFG-RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhcccCccc-eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            556689999999 88777666555568888886432 2223345677888999999999999999999999999999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      |-||++--.++.
T Consensus       502 ClGGElWTiLrd  513 (732)
T KOG0614|consen  502 CLGGELWTILRD  513 (732)
T ss_pred             hcCchhhhhhhh
Confidence            999998776653

>KOG1166|consensus

Probab=97.91  E-value=9.7e-06  Score=59.65  Aligned_cols=86  Identities=15%  Similarity=0.007  Sum_probs=55.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC---CCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK---HDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+...+|+|+|| .||.+.... ++.+|+|+-.....     .++-.-.+++.+|+   -+.+..+.+.....+..+|+
T Consensus       700 ~~I~~e~G~g~y~-~vy~a~~~~-~~~~alK~e~P~~~-----WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  700 FCISKEIGEGSYG-SVYVATHSN-GKLVALKVEKPPNP-----WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             EEEEeeeccccce-EEEEeecCC-CcEEEEEeecCCCc-----eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence            3567789999999 999998776 89999997642211     22222223344444   22233333333334556899


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      +||.+.|+|+|.+-..
T Consensus       773 ~ey~~~Gtlld~~N~~  788 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTN  788 (974)
T ss_pred             eeccccccHHHhhccC
Confidence            9999999999977543

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.90  E-value=7.7e-05  Score=48.11  Aligned_cols=83  Identities=10%  Similarity=-0.071  Sum_probs=49.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChh-h--------HHHHHHHHHHHhhCCCCCeEeeecc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLV-S--------SKRVFRELKMLCFFKHDNVSITQHT   82 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~-~--------~~~~~~e~~~l~~l~h~niv~~~~~   82 (112)
                      .+.+.+.||+|+|| .||++....+   +..+++|.......... .        ......+...+..+.|+|++.+.+.
T Consensus        13 ~y~i~~~LG~G~fG-~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         13 EWKIDKLIGCGGFG-CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             ceEEeeEEecCCCc-eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            45778899999999 9999987666   55677775432111100 0        0112233344556789999976654


Q ss_pred             CCCC----CceEEEEeccCC
Q psy16893         83 PYTT----RRMYPGLTLRLG   98 (112)
Q Consensus        83 ~~~~----~~~~lv~e~~~~   98 (112)
                      ....    ...+++++++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~  111 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE  111 (294)
T ss_pred             eeEecCCceEEEEEEehhcc
Confidence            3321    134677887654

>KOG0665|consensus

Probab=97.88  E-value=5.7e-06  Score=53.85  Aligned_cols=78  Identities=29%  Similarity=0.340  Sum_probs=61.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCceEEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRRMYPGL   93 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~~lv~   93 (112)
                      ..++.|.-  .|..+.+.-.++.|++|++...+.+...+++..+|..++..++|+|++.+...+..      ...+|+||
T Consensus        23 ~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~  100 (369)
T KOG0665|consen   23 KPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM  100 (369)
T ss_pred             cccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence            45666655  46667777889999999997777667778888999999999999999977775543      35689999


Q ss_pred             eccCCc
Q psy16893         94 TLRLGE   99 (112)
Q Consensus        94 e~~~~~   99 (112)
                      |+|...
T Consensus       101 e~m~~n  106 (369)
T KOG0665|consen  101 ELMDAN  106 (369)
T ss_pred             HhhhhH
Confidence            999863

>KOG1164|consensus

Probab=97.86  E-value=8.9e-05  Score=48.68  Aligned_cols=87  Identities=14%  Similarity=0.046  Sum_probs=58.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-CeEEEEEcccccCChhhHHHHHHHHHHHhhCCC----CCeEeeeccC-CCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH----DNVSITQHTP-YTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~   88 (112)
                      .+.+...||+|+|| .||.+.+...+ ..+|+|........ . ...+..|+.++..+..    .++..+.... .....
T Consensus        19 ~~~i~~~iG~G~fG-~V~~v~~~~~~~~~~a~K~e~~~~~~-~-~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFG-AVYLVSDKSEKNKEYAKKLEKKELGS-K-PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCc-eEEEEEecCCCCeeEEEEEEEecccC-C-CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            56788899999999 99999977664 56888876432111 1 1145667777777762    3555555555 35566


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      -|+||+.+ |.+|.+..
T Consensus        96 ~~iVM~l~-G~sL~dl~  111 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLR  111 (322)
T ss_pred             eEEEEecc-CccHHHHH
Confidence            79999977 45676644

>KOG0195|consensus

Probab=97.63  E-value=1.3e-05  Score=51.55  Aligned_cols=87  Identities=9%  Similarity=-0.108  Sum_probs=62.7

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      ..+|.+...| ..|++.....  -++.|.+........-.+.|..|...|+-+.||||....+.+..+..+.++..||+.
T Consensus       195 ~tkl~e~hsg-elwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~  271 (448)
T KOG0195|consen  195 ITKLAESHSG-ELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF  271 (448)
T ss_pred             hhhhccCCCc-ccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence            3456666677 8888776533  345565542222222335677788888888999999999999888889999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      |+|+..+...
T Consensus       272 gslynvlhe~  281 (448)
T KOG0195|consen  272 GSLYNVLHEQ  281 (448)
T ss_pred             hHHHHHHhcC
Confidence            9999988653

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.60  E-value=0.00034  Score=42.97  Aligned_cols=83  Identities=18%  Similarity=0.071  Sum_probs=54.0

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCe--EeeeccCCC---CCceEEEEe
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV--SITQHTPYT---TRRMYPGLT   94 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~---~~~~~lv~e   94 (112)
                      +.++.|..+ .+|+.... .+..+++|........ .....+..|+.++..+.+.++  ..+......   .+..+++||
T Consensus         4 ~~l~~G~~n-~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSN-LTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccc-eEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            467889998 99998754 3567999987532211 123456788888888875333  233332222   135689999


Q ss_pred             ccCCcchhhhh
Q psy16893         95 LRLGEVHVRRW  105 (112)
Q Consensus        95 ~~~~~~l~~~~  105 (112)
                      |++|.++.+.+
T Consensus        81 ~i~G~~l~~~~   91 (223)
T cd05154          81 RVDGRVLRDRL   91 (223)
T ss_pred             EeCCEecCCCC
Confidence            99998876654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.36  E-value=0.00053  Score=40.50  Aligned_cols=76  Identities=5%  Similarity=-0.212  Sum_probs=48.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE-eeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.++.|..+ .+|+....  +..+++|.......   .......|+.++..+.+.+++ .+.....  ..-++||||++|
T Consensus         4 ~~l~~G~~~-~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G   75 (170)
T cd05151           4 SPLKGGMTN-KNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG   75 (170)
T ss_pred             eecCCcccC-ceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence            467888888 99987754  67799998743211   112346688888777654444 2332222  224799999999


Q ss_pred             cchhh
Q psy16893         99 EVHVR  103 (112)
Q Consensus        99 ~~l~~  103 (112)
                      .++.+
T Consensus        76 ~~l~~   80 (170)
T cd05151          76 SELLT   80 (170)
T ss_pred             Ccccc
Confidence            87653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3741|consensus

Probab=97.33  E-value=0.00092  Score=46.71  Aligned_cols=77  Identities=13%  Similarity=-0.019  Sum_probs=54.5

Q ss_pred             CcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC----CCCceEEEEeccCC-cc
Q psy16893         26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY----TTRRMYPGLTLRLG-EV  100 (112)
Q Consensus        26 ~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~lv~e~~~~-~~  100 (112)
                      -|..+.|++....+|..+++|+++....  ........-++.++++.|+|+|.+++++.    .+..+.||++|.++ .+
T Consensus       287 ~~~~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T  364 (655)
T KOG3741|consen  287 LFSITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT  364 (655)
T ss_pred             cccceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence            4655789999888999999999953211  11112234566788999999998888664    24568999999984 45


Q ss_pred             hhhh
Q psy16893        101 HVRR  104 (112)
Q Consensus       101 l~~~  104 (112)
                      |+|+
T Consensus       365 L~d~  368 (655)
T KOG3741|consen  365 LYDL  368 (655)
T ss_pred             HHHH
Confidence            6654

>KOG1024|consensus

Probab=97.29  E-value=9.5e-05  Score=49.84  Aligned_cols=91  Identities=10%  Similarity=-0.075  Sum_probs=63.7

Q ss_pred             cccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYP   91 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l   91 (112)
                      +...+.+|.|| .||.+-.+.     ..+.|-+|.+. ....+.+...++.|...+..+.|||+......+.. ....++
T Consensus       288 l~~llqEGtFG-ri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V  365 (563)
T KOG1024|consen  288 LSCLLQEGTFG-RIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV  365 (563)
T ss_pred             chhhhhcCchh-heeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence            33467899999 999884321     12335566553 22334455678899999999999999987775544 566788


Q ss_pred             EEeccCCcchhhhhhhcCC
Q psy16893         92 GLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~~  110 (112)
                      ++.++..|.|-.++...+|
T Consensus       366 ~y~~~~~gNLK~FL~~Cr~  384 (563)
T KOG1024|consen  366 LYPATGVGNLKSFLQICRG  384 (563)
T ss_pred             EEeccCcchHHHHHHHhcc
Confidence            9999999998888764444

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.13  E-value=0.0039  Score=39.44  Aligned_cols=83  Identities=16%  Similarity=0.079  Sum_probs=50.8

Q ss_pred             ccc-cCCcceEEEEEEcCCCCCeEEEEEccccc------C-----ChhhHHHHHHHHHHHhhCCCCCeE--eeeccCC-C
Q psy16893         21 EVG-LLSICSSVKAVTDPRDGRRVALKKLPNVF------Q-----SLVSSKRVFRELKMLCFFKHDNVS--ITQHTPY-T   85 (112)
Q Consensus        21 ~lg-~g~~g~~v~~~~~~~~~~~va~k~i~~~~------~-----~~~~~~~~~~e~~~l~~l~h~niv--~~~~~~~-~   85 (112)
                      +|| .|+.| .+|.....  +..+++|......      .     ......++.+|+.++..+.|+++.  .+.+... .
T Consensus        38 ~lg~~~g~g-tv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         38 VVGSAKGRG-TTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             eeecCCCCc-cEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            465 66777 77776553  6678888774210      0     012235678899999999988763  3333221 1


Q ss_pred             CC---ceEEEEeccCC-cchhhhhh
Q psy16893         86 TR---RMYPGLTLRLG-EVHVRRWT  106 (112)
Q Consensus        86 ~~---~~~lv~e~~~~-~~l~~~~~  106 (112)
                      ..   ..++|+|+++| .+|.+.+.
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~  139 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQ  139 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHh
Confidence            22   23599999997 56666654

>KOG0603|consensus

Probab=96.96  E-value=0.00011  Score=51.61  Aligned_cols=87  Identities=20%  Similarity=0.140  Sum_probs=63.6

Q ss_pred             ccccCCcceEEEEEEc---CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEecc
Q psy16893         21 EVGLLSICSSVKAVTD---PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~---~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ++|+|+|| .++.+..   ...+..+++|.+.+.............|-.++...+ ||.++.+...+..+..++++++|.
T Consensus         1 vlg~g~~g-kvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYG-KVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCc-chHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            46889998 7766542   345677888888644322222224445666777777 999999988888888899999999


Q ss_pred             CCcchhhhhhhc
Q psy16893         97 LGEVHVRRWTKD  108 (112)
Q Consensus        97 ~~~~l~~~~~~~  108 (112)
                      .||.++-++++.
T Consensus        80 rgg~lft~l~~~   91 (612)
T KOG0603|consen   80 RGGDLFTRLSKE   91 (612)
T ss_pred             ccchhhhccccC
Confidence            999999888653

>KOG1243|consensus

Probab=96.93  E-value=0.0032  Score=45.06  Aligned_cols=63  Identities=17%  Similarity=0.047  Sum_probs=47.7

Q ss_pred             EEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         34 VTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        34 ~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +..+.++..|.+........  .......+.++.|+.++||||+.+.+.......+|||+|-+.-
T Consensus        31 ~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P   93 (690)
T KOG1243|consen   31 GTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP   93 (690)
T ss_pred             cceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc
Confidence            34455677888887753221  2344567788899999999999999999888899999997653

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.87  E-value=0.0035  Score=38.18  Aligned_cols=78  Identities=15%  Similarity=0.023  Sum_probs=53.2

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE-eeeccCCCCCceEEEEecc
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~   96 (112)
                      ..+.|+.|.++ .||.+...  +..+|+|.-+.+    .....+..|+++|..+.-.++- .++.+..    -++.|||+
T Consensus        26 v~~~L~KG~~s-~Vyl~~~~--~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i   94 (201)
T COG2112          26 VEKELAKGTTS-VVYLGEWR--GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYI   94 (201)
T ss_pred             hhhhhhccccc-EEEEeecc--CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhh
Confidence            44579999999 99998865  567999976432    2235677898888877755554 2332222    24569999


Q ss_pred             CCcchhhhhh
Q psy16893         97 LGEVHVRRWT  106 (112)
Q Consensus        97 ~~~~l~~~~~  106 (112)
                      .|..|.+.+.
T Consensus        95 ~G~~L~~~~~  104 (201)
T COG2112          95 DGRPLGKLEI  104 (201)
T ss_pred             cCcchhhhhh
Confidence            9987766543

>KOG0590|consensus

Probab=96.34  E-value=0.00093  Score=47.63  Aligned_cols=90  Identities=10%  Similarity=-0.046  Sum_probs=57.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcc----cccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLP----NVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .....+|.|++| .++...........+.|...    ...........+..|..+-..+.|+|++.......+....+..
T Consensus       321 ~~~~~~g~ga~g-~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~  399 (601)
T KOG0590|consen  321 KPGRVLGSGAYG-SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS  399 (601)
T ss_pred             CccceeeecccC-ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence            344578999999 77776655555545555432    1111111123366777788889999998666655554444555


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      ||||++ +|+.++...
T Consensus       400 mE~~~~-Dlf~~~~~~  414 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSN  414 (601)
T ss_pred             hhcccH-HHHHHHhcc
Confidence            999999 888888653

>KOG0590|consensus

Probab=96.32  E-value=0.0023  Score=45.71  Aligned_cols=94  Identities=16%  Similarity=0.071  Sum_probs=67.2

Q ss_pred             hhhhcccccccCCcceEEEEEEc-CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTD-PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~-~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   91 (112)
                      ..+.+.+.||+|+|+ .+..... ......+|.|.+...............|..+...+. |.|++.+.+.....+..++
T Consensus        20 ~~~~~~~~ig~gs~~-~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFS-SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             ccccccccccccccc-hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            455677789999999 7666554 334455777766533212222344445777777776 9999999998888888899


Q ss_pred             EEeccCCcchhhhh-hhc
Q psy16893         92 GLTLRLGEVHVRRW-TKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~-~~~  108 (112)
                      ++++..++++++.+ ..+
T Consensus        99 ~~~~s~g~~~f~~i~~~~  116 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPD  116 (601)
T ss_pred             ccCcccccccccccccCC
Confidence            99999999999988 554

>KOG0601|consensus

Probab=96.27  E-value=0.0043  Score=43.45  Aligned_cols=87  Identities=17%  Similarity=0.062  Sum_probs=63.0

Q ss_pred             hcccccccCCcceEEEEEEcC-CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      -++..||.+.|+ .++.+..+ .++..+++|.+........+...-+.|+-+...+. |.+++.+...+......|+-.|
T Consensus       268 ~~v~~i~~~~~~-~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e  346 (524)
T KOG0601|consen  268 GLVSKISDGNFS-SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE  346 (524)
T ss_pred             ceeEEccCCccc-cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence            456689999998 77776654 56778999988654443334444556666666665 8999988888888777899999


Q ss_pred             ccCCcchhhh
Q psy16893         95 LRLGEVHVRR  104 (112)
Q Consensus        95 ~~~~~~l~~~  104 (112)
                      |+.++++..+
T Consensus       347 ~~~~~s~~l~  356 (524)
T KOG0601|consen  347 FCEGGSSSLR  356 (524)
T ss_pred             hhcCcchhhh
Confidence            9998876443

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.63  E-value=0.086  Score=36.12  Aligned_cols=80  Identities=19%  Similarity=0.090  Sum_probs=48.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEccccc----CC-hhhHHHHHHHHHHHhhCC-C--CCeEeeeccCCCCCceEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF----QS-LVSSKRVFRELKMLCFFK-H--DNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~----~~-~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~l   91 (112)
                      +.||.|.+. .||+......++.+++|.-....    .. +....+...|.+.|..+. +  .++..+..+  +.+.-++
T Consensus        32 ~elggGn~N-~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         32 REIGDGNLN-LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eEcCCCceE-EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            478999998 99998875433579999853110    10 123356677777777653 2  223334333  2234589


Q ss_pred             EEeccCCcchh
Q psy16893         92 GLTLRLGEVHV  102 (112)
Q Consensus        92 v~e~~~~~~l~  102 (112)
                      |||++++..++
T Consensus       109 VME~L~~~~~l  119 (401)
T PRK09550        109 VMEDLSDHKIL  119 (401)
T ss_pred             EEecCCCccHH
Confidence            99999975543

>PLN02876 acyl-CoA dehydrogenase

Probab=95.62  E-value=0.08  Score=39.43  Aligned_cols=82  Identities=20%  Similarity=0.137  Sum_probs=49.8

Q ss_pred             ccccccCCcceEEEEEEcCCCC--CeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeE--eeeccCCC---CCceE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDG--RRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVS--ITQHTPYT---TRRMY   90 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~--~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv--~~~~~~~~---~~~~~   90 (112)
                      ++.++.|... ..|.......+  ..+++|..+... .......+.+|.++++.+. |.++.  .+...+.+   .+..|
T Consensus        43 v~~l~gG~sn-~ty~l~~~~~~~~~~~VLR~~p~~~-~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSN-PTFLLEVGNGGSVKRYVLRKKPPGK-LLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             EEEeCCCCcC-ceEEEEECCCCcceeEEEEeCCCCc-cCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence            3457778777 77876543222  357777654221 1122346778999999886 66653  33333333   24568


Q ss_pred             EEEeccCCcchh
Q psy16893         91 PGLTLRLGEVHV  102 (112)
Q Consensus        91 lv~e~~~~~~l~  102 (112)
                      +||||++|..+.
T Consensus       121 lVME~v~G~~~~  132 (822)
T PLN02876        121 YIMEYLEGRIFV  132 (822)
T ss_pred             EEEEecCCcccC
Confidence            999999987543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=94.99  E-value=0.098  Score=32.33  Aligned_cols=75  Identities=8%  Similarity=-0.020  Sum_probs=44.3

Q ss_pred             cccccCCcceEEEEEEcCC------CCCeEEEEEcccc---cCC-------------------hhh--HHHHHHHHHHHh
Q psy16893         20 DEVGLLSICSSVKAVTDPR------DGRRVALKKLPNV---FQS-------------------LVS--SKRVFRELKMLC   69 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~------~~~~va~k~i~~~---~~~-------------------~~~--~~~~~~e~~~l~   69 (112)
                      ..||.|.=+ .||.+....      .+..+|+|..+..   +..                   +..  .....+|.+.|.
T Consensus         3 g~i~~GKEa-~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           3 GCISTGKES-VVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CccccCcce-EEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            357788888 888886543      2467899876421   000                   000  112347888888


Q ss_pred             hCCCCCeE--eeeccCCCCCceEEEEeccCCc
Q psy16893         70 FFKHDNVS--ITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        70 ~l~h~niv--~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ++...++.  .+...  .  .-+|+|||+.++
T Consensus        82 rl~~~Gv~vP~pi~~--~--~~~lvME~Ig~~  109 (197)
T cd05146          82 RMQKAGIPCPEVVVL--K--KHVLVMSFIGDD  109 (197)
T ss_pred             HHHHcCCCCCeEEEe--c--CCEEEEEEcCCC
Confidence            88754433  33332  2  238899999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.73  E-value=0.19  Score=31.66  Aligned_cols=76  Identities=14%  Similarity=0.004  Sum_probs=45.3

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC-CeEeeeccCCCCCceEEEEeccCCc
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD-NVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      .|..|+.++.||+....  +..+.+|......     ...+.+|+++++.+... .+..+.......+.-+++||+++|.
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence            45566775588987653  3568888764221     23456688877776522 1113333333334568999999987


Q ss_pred             chhh
Q psy16893        100 VHVR  103 (112)
Q Consensus       100 ~l~~  103 (112)
                      ++.+
T Consensus        78 ~l~~   81 (244)
T cd05150          78 PAAA   81 (244)
T ss_pred             cHhH
Confidence            7654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.52  E-value=0.14  Score=32.24  Aligned_cols=72  Identities=11%  Similarity=-0.070  Sum_probs=45.9

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCe--EeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV--SITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~   97 (112)
                      ..+++|..+ .+|+.    .+..+++|..+..    .......+|.+++..+..-++  ..........+...++||+++
T Consensus         7 ~~i~~G~t~-~~y~~----~~~~~VlR~~~~~----~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNG-ESYTH----KTGKWMLKLYNPG----FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCc-ceeEe----cCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence            467999998 89973    2445778876421    123446778888877764444  233333344455678999999


Q ss_pred             Ccc
Q psy16893         98 GEV  100 (112)
Q Consensus        98 ~~~  100 (112)
                      |.+
T Consensus        78 G~~   80 (226)
T TIGR02172        78 GKR   80 (226)
T ss_pred             Ccc
Confidence            964

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.36  E-value=0.41  Score=29.35  Aligned_cols=77  Identities=16%  Similarity=-0.013  Sum_probs=48.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCe--Eeeec---cCCCCCceEEEEe
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV--SITQH---TPYTTRRMYPGLT   94 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~---~~~~~~~~~lv~e   94 (112)
                      +.++.|..+ .+|......  ..+++|.....    .....+..|..++..+....+  ..+..   ........+++|+
T Consensus         3 ~~l~~G~~n-~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    3 RPLSGGFSN-RVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEESSSS-EEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred             ccCCCCCee-eEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence            467888888 899877654  47999986421    234566778777776653222  22222   2222444799999


Q ss_pred             ccCCcchhh
Q psy16893         95 LRLGEVHVR  103 (112)
Q Consensus        95 ~~~~~~l~~  103 (112)
                      +++|..+.+
T Consensus        76 ~i~g~~~~~   84 (239)
T PF01636_consen   76 YIPGRPLDD   84 (239)
T ss_dssp             EESSEEHHH
T ss_pred             Eeccccccc
Confidence            999987665

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK10593 hypothetical protein; Provisional

Probab=94.10  E-value=0.31  Score=31.94  Aligned_cols=76  Identities=11%  Similarity=-0.031  Sum_probs=46.8

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC---CeEeeeccC---CCCCceEEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD---NVSITQHTP---YTTRRMYPGL   93 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~---~~~~~~~lv~   93 (112)
                      +.|+.|..+ .+|..... .+ .+.+|..+ ..   .....+..|...|+.+...   .+..+...+   ...+..+|||
T Consensus        20 ~~i~~G~~~-~vy~~~~~-~~-~~~~k~~~-~~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         20 ECISEQPYA-ALWALYDS-QG-NPMPLMAR-SF---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             eecCCccce-eEEEEEcC-CC-CEEEEEec-cc---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            368999999 99987543 23 36667532 21   1124567788888776532   222444332   2245579999


Q ss_pred             eccCCcchh
Q psy16893         94 TLRLGEVHV  102 (112)
Q Consensus        94 e~~~~~~l~  102 (112)
                      |++++.++.
T Consensus        93 E~i~G~~~~  101 (297)
T PRK10593         93 ERLRGVSVE  101 (297)
T ss_pred             eccCCEecC
Confidence            999997654

>KOG1033|consensus

Probab=93.32  E-value=0.015  Score=40.59  Aligned_cols=65  Identities=22%  Similarity=0.196  Sum_probs=49.7

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP   83 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (112)
                      .....+|.|+|| .++.+.....+..+|||.|... +......+..+++.-+.++.|++++.+...+
T Consensus        52 e~~~~~~~~g~~-~~~~~~n~~d~~~~avkritlk-n~e~s~~rvl~~~~s~a~feh~g~~~~~ha~  116 (516)
T KOG1033|consen   52 EPGQCLGRGGFG-VVFSAQNKADENKYAVKRITLK-NREESRSRVLREVSSLAEFEHPGIKRYFHAW  116 (516)
T ss_pred             cccccccccCcc-ccCCccccccchhhHHHHhccc-chhhhhhhhhccccchhhhcccchhhheece
Confidence            455689999999 9998887766667999999532 3344557788899999999999999654433

>KOG3087|consensus

Probab=93.25  E-value=0.25  Score=30.76  Aligned_cols=85  Identities=11%  Similarity=-0.018  Sum_probs=49.7

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEccc-ccCCh-----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPN-VFQSL-----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~-~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      ....+-+|+=+ .|+.+..  .|+.+.+|.-.. ....+     ...++..+|++.+.++.--.|..+.-.+.+...=.|
T Consensus        11 ~l~likQGAEA-rv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i   87 (229)
T KOG3087|consen   11 SLELIKQGAEA-RVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQI   87 (229)
T ss_pred             cceeeecccee-eEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeE
Confidence            34567788887 7887665  477777776531 11111     224567889999988764444422222222222378


Q ss_pred             EEeccCC-cchhhhh
Q psy16893         92 GLTLRLG-EVHVRRW  105 (112)
Q Consensus        92 v~e~~~~-~~l~~~~  105 (112)
                      .|||++| .++-++|
T Consensus        88 ~ME~~~g~~~vk~~i  102 (229)
T KOG3087|consen   88 YMEFIDGASTVKDFI  102 (229)
T ss_pred             EEEeccchhHHHHHH
Confidence            8999987 3444444

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.08  E-value=0.77  Score=29.64  Aligned_cols=71  Identities=14%  Similarity=-0.060  Sum_probs=42.4

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCC---eEeeeccCCCCCceEEEEeccCC
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN---VSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~n---iv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.-|... ..|...+  ...++.+|+-.     ....+-+..|+.-|..+...|   +..+.......++.|||+||++.
T Consensus        24 v~gG~in-ea~~v~d--g~~~~FvK~n~-----~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~   95 (286)
T COG3001          24 VSGGDIN-EAWRLRD--GTDPFFVKCNQ-----REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPT   95 (286)
T ss_pred             cCCcccc-ceeEeec--CCcceEEEecc-----hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccC
Confidence            4444444 4454333  34568888642     233355677776666665444   33555555667778999999997


Q ss_pred             cc
Q psy16893         99 EV  100 (112)
Q Consensus        99 ~~  100 (112)
                      +.
T Consensus        96 ~~   97 (286)
T COG3001          96 GP   97 (286)
T ss_pred             CC
Confidence            54

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.76  E-value=0.79  Score=28.44  Aligned_cols=83  Identities=12%  Similarity=0.037  Sum_probs=47.1

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEc-ccccCChhh-----HHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKL-PNVFQSLVS-----SKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i-~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+|+=+ .++.....  +..+.+|.- ++.-..+..     ..+-.+|++++..+.-..+..+.-+..+.....++||
T Consensus         3 ~i~~GAEa-~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           3 LIKQGAEA-IIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             hhhCCcce-eEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            45677777 77766442  333566643 222222221     2446789999988765444432222233344579999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |.+|..+-|.+.
T Consensus        80 ~I~G~~lkd~l~   91 (204)
T COG3642          80 YIEGELLKDALE   91 (204)
T ss_pred             EeCChhHHHHHH
Confidence            999876654553

>KOG0601|consensus

Probab=92.73  E-value=0.15  Score=36.06  Aligned_cols=85  Identities=20%  Similarity=0.074  Sum_probs=60.1

Q ss_pred             hccccccc--CCcceEEEEEEc--CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGL--LSICSSVKAVTD--PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~--g~~g~~v~~~~~--~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   91 (112)
                      .....+|.  |.+| .+|.+..  ..++..+|+|.-......+....+-.+++.....+. |+|.+.....+...+..|+
T Consensus       117 ~~~~~~g~~~g~~~-s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  117 PISSRTGSLPGSKG-SVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             ccccccccCCCCCc-eeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            45557888  9999 9998877  777888999874332222233334456666566665 9999998888888888999


Q ss_pred             EEeccCCcchhh
Q psy16893         92 GLTLRLGEVHVR  103 (112)
Q Consensus        92 v~e~~~~~~l~~  103 (112)
                      -.|++. .++.+
T Consensus       196 qtE~~~-~sl~~  206 (524)
T KOG0601|consen  196 QTELCG-ESLQS  206 (524)
T ss_pred             eecccc-chhHH
Confidence            999886 34444

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.63  E-value=0.084  Score=29.86  Aligned_cols=28  Identities=29%  Similarity=0.305  Sum_probs=23.4

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLP   49 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~   49 (112)
                      ..|++|+.| .|+++... +|+.||+|..+
T Consensus        17 ~PlasASia-QVh~a~l~-~g~~VaVKV~r   44 (119)
T PF03109_consen   17 EPLASASIA-QVHRARLK-DGEEVAVKVQR   44 (119)
T ss_pred             chhhheehh-hheeeeec-ccchhhhhhcc
Confidence            478999999 99998754 48899999875

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=89.63  E-value=1.5  Score=27.30  Aligned_cols=74  Identities=11%  Similarity=-0.055  Sum_probs=41.0

Q ss_pred             cccccCCcceEEEEEEcCC-CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE-eeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVTDPR-DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~-~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.|..|-.. .+|+..... .+..+.+|......   .......+|+.++..+...+++ .+.....  +  .++|||++
T Consensus         4 ~~l~gG~tN-~~~~v~~~~~~~~~~vlR~~~~~~---~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~   75 (235)
T cd05157           4 KRFTGGITN-KLVKVSNKEDNQDAVLVRVYGNKT---ELIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIP   75 (235)
T ss_pred             EEcCCcccc-eEEEEEcCCCCCCeEEEEEccCCc---cceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeC
Confidence            356566666 888876432 24568888653211   1112234677777777543333 2222211  1  37999999


Q ss_pred             Ccch
Q psy16893         98 GEVH  101 (112)
Q Consensus        98 ~~~l  101 (112)
                      |.++
T Consensus        76 G~~l   79 (235)
T cd05157          76 GRTL   79 (235)
T ss_pred             CCcC
Confidence            8765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG1023|consensus

Probab=89.01  E-value=0.23  Score=34.88  Aligned_cols=39  Identities=10%  Similarity=-0.050  Sum_probs=34.3

Q ss_pred             hhCCCCCeEeeeccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         69 CFFKHDNVSITQHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        69 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +.+.|.|+..+.+.+.++..+++|-+||..|+|.|.+..
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            467799999998888887889999999999999998865

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=88.47  E-value=2.1  Score=29.23  Aligned_cols=79  Identities=16%  Similarity=-0.004  Sum_probs=46.5

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccc---c--CChhhHHHHHHHHHHHhhCC--CCCeE-eeeccCCCCCceEEE
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNV---F--QSLVSSKRVFRELKMLCFFK--HDNVS-ITQHTPYTTRRMYPG   92 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~---~--~~~~~~~~~~~e~~~l~~l~--h~niv-~~~~~~~~~~~~~lv   92 (112)
                      .+|.|... .||+......+..+++|+-..-   .  ..+....+...|...|....  -|..+ .++.  .+.+...++
T Consensus         2 EigdGnlN-~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLN-LVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTV   78 (370)
T ss_pred             cCCCCceE-EEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--Eccccceeh
Confidence            46888887 9999986533357999976311   1  11223456667888776653  23223 2332  223334689


Q ss_pred             EeccCCcchh
Q psy16893         93 LTLRLGEVHV  102 (112)
Q Consensus        93 ~e~~~~~~l~  102 (112)
                      ||+++...++
T Consensus        79 MEdL~~~~il   88 (370)
T TIGR01767        79 MEDLSHHKIA   88 (370)
T ss_pred             HhhCccchHH
Confidence            9999765543

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=88.10  E-value=4.7  Score=25.26  Aligned_cols=75  Identities=8%  Similarity=-0.059  Sum_probs=41.9

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC-CeE--eeeccCCC---CCceEEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD-NVS--ITQHTPYT---TRRMYPGL   93 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~-niv--~~~~~~~~---~~~~~lv~   93 (112)
                      +.++.|+..+.+|...     ..+++|..+.    ......+.+|.+++..+... .+.  .+......   ....+++|
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~----~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA----AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc----cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence            3566666664688642     2467775431    11234677899888777532 222  22222222   12347899


Q ss_pred             eccCCcchhh
Q psy16893         94 TLRLGEVHVR  103 (112)
Q Consensus        94 e~~~~~~l~~  103 (112)
                      ++++|.++.+
T Consensus        74 ~~i~G~~l~~   83 (235)
T cd05155          74 RWLEGETATA   83 (235)
T ss_pred             EeecCCCCCc
Confidence            9999977643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1240|consensus

Probab=87.35  E-value=0.11  Score=40.03  Aligned_cols=85  Identities=20%  Similarity=0.155  Sum_probs=56.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      -..+.||++.|- .+.++.+. .| .+.+|+.-+...  .-..-...+.|++ ...+++||.+.+.-.-......|+|-+
T Consensus        26 ~~~~~LGstRFl-Kv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   26 HYVENLGSTRFL-KVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             eeecccCchhhh-hhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            455689999998 88887764 33 388887743321  1111223344555 556679999987766666667789999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |... +|+||+.
T Consensus       102 yvkh-nLyDRlS  112 (1431)
T KOG1240|consen  102 YVKH-NLYDRLS  112 (1431)
T ss_pred             HHhh-hhhhhhc
Confidence            8876 6899884

>PRK12396 5-methylribose kinase; Reviewed

Probab=86.51  E-value=1  Score=31.11  Aligned_cols=79  Identities=14%  Similarity=0.032  Sum_probs=47.7

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEccc---c-cCChhhHHHHHHHHHHHhhCC--CCCeE-eeeccCCCCCceEE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPN---V-FQSLVSSKRVFRELKMLCFFK--HDNVS-ITQHTPYTTRRMYP   91 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~---~-~~~~~~~~~~~~e~~~l~~l~--h~niv-~~~~~~~~~~~~~l   91 (112)
                      .+.||.|... .||+..+...+..++||+-..   . ...+-...+...|..+|+...  -|..| .++.  .+.+.-.+
T Consensus        34 ~~eigdGnlN-~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~  110 (409)
T PRK12396         34 CKEIGDGNLN-YVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCC  110 (409)
T ss_pred             eeEcCCCceE-EEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhH
Confidence            4578999888 999988643356799987531   1 111233566777888887654  23333 3332  22233467


Q ss_pred             EEeccCCcc
Q psy16893         92 GLTLRLGEV  100 (112)
Q Consensus        92 v~e~~~~~~  100 (112)
                      |||+++...
T Consensus       111 vMEdL~~~~  119 (409)
T PRK12396        111 VMEDLSDHT  119 (409)
T ss_pred             HHHhCcccH
Confidence            899997644

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=86.07  E-value=2.7  Score=27.67  Aligned_cols=72  Identities=11%  Similarity=-0.112  Sum_probs=36.3

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC--CCCeE-eeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK--HDNVS-ITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~--h~niv-~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.++.|... ..|+..  .++..+.+|.-..     ....-+..|..-|+.|.  .+-.| .+.......+.-||++||+
T Consensus        23 ~~v~GG~i~-~a~~~~--~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   23 EPVSGGDIN-EAYRLD--TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEE--SSSS-EEEEEE--TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             EecCCCChh-heEEEE--CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            356777777 888765  4567799997641     11234566777776663  22222 3333332233349999999


Q ss_pred             CCc
Q psy16893         97 LGE   99 (112)
Q Consensus        97 ~~~   99 (112)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=85.97  E-value=2.5  Score=27.87  Aligned_cols=33  Identities=24%  Similarity=0.180  Sum_probs=28.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEccc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPN   50 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~   50 (112)
                      +..+.||.|.++ .||.+.+..+++.+|+|....
T Consensus        15 ~~~~~i~~g~~~-~v~~v~d~~t~~~~avkvf~~   47 (288)
T PF14531_consen   15 VRGRIIGKGGFS-IVFEVTDVETGEEFAVKVFLL   47 (288)
T ss_dssp             EEEEEEEEETTE-EEEEEEETTTTEEEEEEEEEE
T ss_pred             EEccccccCCce-EEEEEEEccCCceEEEEEEec
Confidence            455689999999 999999999999999998753

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=85.70  E-value=5.8  Score=26.30  Aligned_cols=79  Identities=22%  Similarity=0.131  Sum_probs=49.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-------CCh-------------hhHHHHHHHHHHHhhCCCC--
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-------QSL-------------VSSKRVFRELKMLCFFKHD--   74 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-------~~~-------------~~~~~~~~e~~~l~~l~h~--   74 (112)
                      .+...||-|.=+ .||.+.+. .+..+++|--+...       ...             .+.....+|...|.++...  
T Consensus        94 ~iG~~IGvGKEs-dVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          94 AIGTKIGVGKES-DVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             hhccccccCccc-eEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            355788999999 99998875 56778998543110       000             0122356788888887643  


Q ss_pred             CeEeeeccCCCCCceEEEEeccCCcch
Q psy16893         75 NVSITQHTPYTTRRMYPGLTLRLGEVH  101 (112)
Q Consensus        75 niv~~~~~~~~~~~~~lv~e~~~~~~l  101 (112)
                      .+..+.+.    +.=.++||+++|-.|
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL  194 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVEL  194 (304)
T ss_pred             CCCCcccc----ccceeeeehccccee
Confidence            33333332    223789999998554

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=84.50  E-value=1.7  Score=31.04  Aligned_cols=28  Identities=25%  Similarity=0.312  Sum_probs=23.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLP   49 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~   49 (112)
                      +.+++++-| .|+++.- ++|+.||||+.+
T Consensus       131 ~PiAsASIa-QVH~A~L-~sG~~VAVKVqr  158 (517)
T COG0661         131 EPIASASIA-QVHRAVL-KSGEEVAVKVQR  158 (517)
T ss_pred             CchhhhhHh-hheeEEe-cCCCEEEEEecC
Confidence            468899999 9999885 459999999886

>PLN02756 S-methyl-5-thioribose kinase

Probab=83.60  E-value=6.3  Score=27.50  Aligned_cols=76  Identities=18%  Similarity=0.107  Sum_probs=42.9

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccC---C--hhhHHHHHHHHHHHhhCC---CCCeEeeeccCCCCCceE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ---S--LVSSKRVFRELKMLCFFK---HDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~---~--~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+|.|... .||+..+.  +..+++|+-.....   .  +....+-..|+..|..+.   ..++..+..++.+  .-+
T Consensus        37 ~~eiggGn~N-~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~v  111 (418)
T PLN02756         37 IKEVGDGNLN-FVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MAL  111 (418)
T ss_pred             EEEcCCCcee-eEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCE
Confidence            3467888887 99997753  44688997641111   0  012334445566665543   1233344444443  347


Q ss_pred             EEEeccCCc
Q psy16893         91 PGLTLRLGE   99 (112)
Q Consensus        91 lv~e~~~~~   99 (112)
                      ++||+++++
T Consensus       112 lvME~L~~~  120 (418)
T PLN02756        112 IGMRYLEPP  120 (418)
T ss_pred             EEEeecCCc
Confidence            889999873

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=83.00  E-value=1.7  Score=26.67  Aligned_cols=44  Identities=11%  Similarity=-0.029  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHhhCCCCCeE--eeeccCCCCCceEEEEeccC-Ccchhhhhh
Q psy16893         59 KRVFRELKMLCFFKHDNVS--ITQHTPYTTRRMYPGLTLRL-GEVHVRRWT  106 (112)
Q Consensus        59 ~~~~~e~~~l~~l~h~niv--~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~  106 (112)
                      .+..+|.+.|..+...++.  .+...  ..  -.|||||++ +|..+.++.
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~--~~--~~ivME~I~~~G~~~~~l~   99 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDY--NR--NVIVMEYIGEDGVPLPRLK   99 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEE--ET--TEEEEE--EETTEEGGCHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEE--eC--CEEEEEecCCCccchhhHH
Confidence            3467899999999866543  33322  22  279999999 234444443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0576|consensus

Probab=81.51  E-value=1.3  Score=32.75  Aligned_cols=70  Identities=4%  Similarity=-0.148  Sum_probs=44.4

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCC-eEeeeccCCCCCceEEEEeccCCc
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN-VSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ..+.++++ ..++.+...+...+ .+.+.     ..  ....-++++|.+++||| .+.....+......++.++++.++
T Consensus       249 ~fvK~alt-knpKkRptaeklL~-h~fvs-----~~--l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  249 NFVKGALT-KNPKKRPTAEKLLQ-HPFVS-----QT--LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             HHHHHHhc-CCCccCCChhhhee-ceeec-----cc--hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            45677777 66665544332222 33331     11  23344778899999999 555666666677789999999887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	112
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-07
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-07
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		7e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		5e-06

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 47 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 56  SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 57  SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 57  SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 43 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 60  SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 34 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 34 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 36 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 35 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 33 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 48 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 48 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 56  SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 60  SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30  SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 57  SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 40  GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           G++VA+KK+PN F  + ++KR  RELK+L  FKHDN+
Sbjct: 79  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 40  GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           G++VA+KK+PN F  + ++KR  RELK+L  FKHDN+
Sbjct: 80  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26  SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           S+CSS     D + G ++A+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 66  SVCSSY----DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 26  SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           S+CS++    D R G +VA+KKL   FQS + +KR +REL +L   +H+NV
Sbjct: 57  SVCSAI----DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+CS+     D R  ++VA+KKL   FQSL+ ++R +REL++L   KH+NV
Sbjct: 43 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+CS++    D R G +VA+KKL   FQS + +KR +REL +L   +H+NV
Sbjct: 39 SVCSAI----DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+CS+     D R  ++VA+KKL   FQSL+ ++R +REL++L   KH+NV
Sbjct: 43 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+CS+     D R  ++VA+KKL   FQSL+ ++R +REL++L   KH+NV
Sbjct: 35 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          ++CS+V    D R G +VA+KKL   FQS + +KR +REL++L   +H+NV
Sbjct: 40 AVCSAV----DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	112
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	9e-16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-15
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-15
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	7e-15
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-14
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-13
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	6e-13
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	8e-13
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-04

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 70.4 bits (173), Expect = 8e-16
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            +V +  D R G +VA+KKL   FQS + +KR +REL++L   +H+NV
Sbjct: 38 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 70.0 bits (172), Expect = 9e-16
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            SV +  D R G +VA+KKL   FQS + +KR +REL +L   +H+NV
Sbjct: 37 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 68.6 bits (168), Expect = 3e-15
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V A  D    R VA+KKL   FQ+   +KR +REL ++    H N+
Sbjct: 38 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 68.6 bits (168), Expect = 3e-15
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V    D    + VA+KK+  +F+ L+  KR+ RE+ +L   K D +
Sbjct: 42 VYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 67.7 bits (166), Expect = 7e-15
 Identities = 24/49 (48%), Positives = 33/49 (67%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 42 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 67.2 bits (164), Expect = 1e-14
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 28  CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
              V A  D    R VA+KKL   FQ+   +KR +REL ++    H N+
Sbjct: 75  QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 66.4 bits (162), Expect = 3e-14
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V    D  + R VA+KK+  VF+ L+  KR+ RE+ +L    HD+V
Sbjct: 69  VCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V + T    G  VA+KK+   F   + + R  RE+K+L  FKH+N+
Sbjct: 27 VCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENI 71

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 62.7 bits (153), Expect = 4e-13
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             V +  D  +  RVA+KK+ + F+     +R  RE+K+L  F+H+N+
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 62.3 bits (152), Expect = 6e-13
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V +  D    +RVA+KK+  V     S K   RE+K++    HDN+
Sbjct: 27 VFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNI 70

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 62.0 bits (151), Expect = 8e-13
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
          V    D R G  VA+KK+ + FQ+   ++R FRE+ +L     H+N+
Sbjct: 25 VWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 57.7 bits (140), Expect = 3e-11
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)

Query: 38 RDGRRVALKKLP---------NVFQSLVSSKRVFRELKMLCFFKHDNV 76
           +G  VA+K++          N+       KRV RE+++L  F H N+
Sbjct: 44 SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V+   +   G  VA+KK   V Q      R  + ++ L    H N+
Sbjct: 39 VQLGKEKSTGMSVAIKK---VIQDPRFRNRELQIMQDLAVLHHPNI 81

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
           S V    +  +  +V +K L       V  K++ RE+K+L   +   N+
Sbjct: 49 YSEVFEAINITNNEKVVVKIL-----KPVKKKKIKREIKILENLRGGPNI 93

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          V  V D   G+R ALKK+          +   REL ++    H N+
Sbjct: 23 VCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNI 62

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 6/46 (13%)

Query: 31  VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           V        G  VA+KK   V Q     +   REL+++    H N+
Sbjct: 70  VYQAKLCDSGELVAIKK---VLQD---KRFKNRELQIMRKLDHCNI 109

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S V  V    DG   ALK++          +   RE  M   F H N+
Sbjct: 43 SYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMHRLFNHPNI 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	112
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.88
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.85
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.84
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.83
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.83
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.82
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.82
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.82
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.81
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.8
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.8
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.8
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.8
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.76
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.73
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.73
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.72
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.7
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.69
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.69
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.68
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.68
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.67
3uqc_A	286	Probable conserved transmembrane protein; structur	99.67
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.67
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.67
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.66
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.66
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.66
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.65
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.65
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.64
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.64
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.64
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.64
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.64
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.64
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.64
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.64
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.63
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.63
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.63
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.63
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.63
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.63
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.63
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.62
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.62
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.62
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.62
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.62
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.62
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.62
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.62
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.62
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.62
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.61
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.61
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.61
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.61
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.6
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.6
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.6
3niz_A	311	Rhodanese family protein; structural genomics, str	99.6
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.6
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.6
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.6
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.6
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.6
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.59
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.59
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.59
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.59
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.59
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.59
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.59
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.59
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.59
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.59
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.59
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.59
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.59
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.59
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.59
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.59
3bhy_A	283	Death-associated protein kinase 3; death associate	99.58
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.58
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.58
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.58
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.58
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.58
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.58
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.58
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.58
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.58
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.58
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.58
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.58
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.58
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.58
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.57
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.57
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.57
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.57
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.57
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.57
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.57
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.57
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.56
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.56
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.56
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.56
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.56
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.56
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.56
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.56
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.56
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.56
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.55
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.55
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.55
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.55
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.55
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.55
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.55
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.55
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.55
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.55
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.55
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.55
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.54
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.54
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.54
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.54
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.54
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.54
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.54
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.54
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.54
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.54
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.54
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.54
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.53
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.53
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.53
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.53
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.52
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.52
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.52
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.52
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.52
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.52
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.52
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.52
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.51
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.51
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.51
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.51
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.51
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.51
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.51
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.5
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.5
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.5
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.5
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.5
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.5
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.5
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.49
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.49
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.49
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.49
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.49
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.49
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.49
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.49
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.49
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.48
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.48
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.48
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.48
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.47
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.47
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.47
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.47
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.47
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.46
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.46
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.46
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.46
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.46
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.46
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.45
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.45
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.45
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.45
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.45
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.45
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.45
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.43
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.43
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.43
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.43
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.42
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.41
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.41
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.41
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.41
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.41
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.4
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.4
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.39
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.39
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.39
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.39
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.38
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.38
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.38
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.37
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.36
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.35
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.35
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.34
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.33
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.32
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.32
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.32
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.31
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.3
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.29
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.28
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.28
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.28
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.27
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.27
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.26
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.26
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.25
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.24
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.22
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.19
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.17
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.14
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.69
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.49
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.45
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.87
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.31
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.95
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.86
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.66
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.82
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.81
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.57
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.53
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	94.42
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.21
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.76
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	92.9
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	85.95

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.88  E-value=6.7e-23  Score=133.35  Aligned_cols=94  Identities=18%  Similarity=0.173  Sum_probs=77.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+|+.++|||||.+.+.+.+.+.+|+|||
T Consensus        25 ~Y~~~~~lG~G~fg-~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           25 KYVRLQKIGEGSFG-KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CEEEEEEC-------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEeEEEecCCCe-EEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45677899999999 99999999999999999997554444556788999999999999999999999888899999999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      ||+||+|++++..++
T Consensus       104 y~~gg~L~~~i~~~~  118 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK  118 (350)
T ss_dssp             CCTTCBHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHcC
Confidence            999999999997544

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.85  E-value=7.6e-22  Score=126.67  Aligned_cols=92  Identities=17%  Similarity=0.101  Sum_probs=80.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+.+... .....+.+.+|+.+|+.++|||||.+.+.+.+.+.+|+||
T Consensus        33 dy~i~~~lG~G~fg-~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           33 DFKFGKILGEGSFS-TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEecccCe-EEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46788899999999 999999999999999999964321 1223467899999999999999999999999989999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||++||+|+++++.
T Consensus       112 Ey~~gG~L~~~i~~  125 (311)
T 4aw0_A          112 SYAKNGELLKYIRK  125 (311)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999999865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=6.4e-21  Score=121.46  Aligned_cols=90  Identities=17%  Similarity=0.035  Sum_probs=76.4

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC----CCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT----TRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv   92 (112)
                      .+.+.||+|+|| .||++.+..++..||+|.+..........+.+.+|+.+++.++|||||.+.+.+..    .+.+|+|
T Consensus        29 ~~~~~iG~G~fg-~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           29 KFDIEIGRGSFK-TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EeeeEEecCcCc-EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            456679999999 99999999999999999996544444556789999999999999999988876543    4568999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      ||||+||+|.+++..
T Consensus       108 mEy~~gg~L~~~l~~  122 (290)
T 3fpq_A          108 TELMTSGTLKTYLKR  122 (290)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCCHHHHHHh
Confidence            999999999998865

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.84  E-value=1.5e-20  Score=120.31  Aligned_cols=90  Identities=16%  Similarity=0.060  Sum_probs=74.0

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++...     .++..||+|.+...  .....+.+.+|+.+|++++|||||.+.+++.+.+.+
T Consensus        14 ~~~l~~~lG~G~fG-~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           14 NIVLKRELGEGAFG-KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             GEEEEEEEEC--CC-CEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             HeEEeeEEeeCCCc-EEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            44677899999999 99999753     35678999999632  334457799999999999999999999999888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |||||||++|+|.++++.
T Consensus        91 ~lV~Ey~~~G~L~~~l~~  108 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRA  108 (299)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999999865

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.83  E-value=4.4e-21  Score=124.66  Aligned_cols=89  Identities=19%  Similarity=0.131  Sum_probs=77.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+.....  ...+.+.+|+.+|+.++|||||.+.+.+.+.+.+||||||
T Consensus        76 y~~~~~iG~G~fG-~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           76 LDNFIKIGEGSTG-IVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             EEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cEEeEEeecCcCe-EEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            4566789999999 999999999999999999964322  2235578999999999999999999999888999999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      |+||+|.+.+..
T Consensus       153 ~~gg~L~~~l~~  164 (346)
T 4fih_A          153 LEGGALTDIVTH  164 (346)
T ss_dssp             CTTEEHHHHHHH
T ss_pred             CCCCcHHHHHHc
Confidence            999999998865

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.83  E-value=8e-21  Score=126.17  Aligned_cols=90  Identities=18%  Similarity=0.114  Sum_probs=78.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+....  ....+.+.+|+.+|+.++|||||.+.+.+...+.+||||||
T Consensus       153 y~~~~~iG~G~fG-~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          153 LDNFIKIGEGSTG-IVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             EEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeeEeccCcCc-EEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            4567789999999 99999999999999999996432  22345678999999999999999999998888899999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      |+||+|.+.++..
T Consensus       230 ~~gG~L~~~i~~~  242 (423)
T 4fie_A          230 LEGGALTDIVTHT  242 (423)
T ss_dssp             CTTEEHHHHHHHS
T ss_pred             CCCCcHHHHHhcc
Confidence            9999999988653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.82  E-value=2.3e-20  Score=118.09  Aligned_cols=92  Identities=16%  Similarity=0.153  Sum_probs=73.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.+++.++|||||.+.+.+.+.+.+|+||
T Consensus        14 ~Y~i~~~lG~G~fg-~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           14 NYQIVKTLGEGSFG-KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCEEEEEEEC---C-CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CeEEEEEEecCcCe-EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            45778899999999 999999999999999999964322 2223467899999999999999999999988889999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+ +|+|++++..+
T Consensus        93 Ey~-~g~L~~~l~~~  106 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR  106 (275)
T ss_dssp             ECC-CEEHHHHHHHS
T ss_pred             eCC-CCCHHHHHHHc
Confidence            999 57899988653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.82  E-value=3e-20  Score=119.26  Aligned_cols=89  Identities=12%  Similarity=-0.037  Sum_probs=73.3

Q ss_pred             hcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||+|+|| .||++..     ..+++.||+|.+... ......+.+.+|+.++++++|||||.+.+++...+.+||
T Consensus        29 ~~~~~lG~G~fG-~Vykg~~~~~~~~~~~~~VAvK~l~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           29 RFMEELGEDRFG-KVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             EEEEEEEECSSC-EEEEEEEC-------CEEEEEEECCC--CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEeeEeccCCCc-EEEEEEEcCCccCCCCeEEEEEEECcc-cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            567889999999 9999974     245678999999633 223345779999999999999999999999988888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      |||||++|+|.++|..
T Consensus       107 V~Ey~~~G~L~~~L~~  122 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVM  122 (308)
T ss_dssp             EEECCSSCBHHHHHHT
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999999854

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.82  E-value=4.2e-20  Score=119.53  Aligned_cols=88  Identities=17%  Similarity=0.073  Sum_probs=74.4

Q ss_pred             hcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||+|+|| .||++...     .++..||+|.+..  ......+.+.+|+.+|++++|||||.+.+++.+.+.+||
T Consensus        44 ~l~~~LG~G~fG-~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           44 VLKWELGEGAFG-KVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             EEEEEEEECSSE-EEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             EEEEEEccCCCc-EEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            566789999999 99999743     3578899999963  233445779999999999999999999999998888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      |||||++|+|.++++.
T Consensus       121 V~Ey~~~G~L~~~l~~  136 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRS  136 (329)
T ss_dssp             EEECCTTCBHHHHHHT
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999998865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=116.28  Aligned_cols=90  Identities=16%  Similarity=0.011  Sum_probs=74.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      .+.+.||+|+|| .||++...   ..||+|.++.........+.+.+|+.++++++|||||.+.+++.. +.+|||||||
T Consensus        39 ~l~~~iG~G~fG-~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~  113 (307)
T 3omv_A           39 MLSTRIGSGSFG-TVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC  113 (307)
T ss_dssp             CEEEECCCCSSS-EEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             EEeeEEeeCCCc-EEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcC
Confidence            567789999999 99999764   359999986444444556789999999999999999999887655 4589999999


Q ss_pred             CCcchhhhhhhcCCC
Q psy16893         97 LGEVHVRRWTKDQGP  111 (112)
Q Consensus        97 ~~~~l~~~~~~~~~~  111 (112)
                      ++|+|.+++....++
T Consensus       114 ~gGsL~~~l~~~~~~  128 (307)
T 3omv_A          114 EGSSLYKHLHVQETK  128 (307)
T ss_dssp             SSCBHHHHHHTSCCC
T ss_pred             CCCCHHHHHhhcCCC
Confidence            999999999765543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.81  E-value=6.4e-20  Score=117.33  Aligned_cols=91  Identities=15%  Similarity=0.082  Sum_probs=73.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC----------
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT----------   85 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----------   85 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+... ......+.+.+|+.+|+.++|||||.+.+.+..          
T Consensus         7 y~~~~~lG~G~fg-~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            7 FEPIQCLGRGGFG-VVFEAKNKVDDCNYAIKRIRLP-NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             EEEEEEEEECC---EEEEEEETTTCCEEEEEEEEEC-SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             CEEeeEEecCCCe-EEEEEEECCCCCEEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4667899999999 9999999999999999998643 233445678999999999999999988776543          


Q ss_pred             --CCceEEEEeccCCcchhhhhhhc
Q psy16893         86 --TRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        86 --~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                        ...+|++||||++|+|.+++...
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~  109 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR  109 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc
Confidence              22479999999999999988653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.80  E-value=2.7e-19  Score=118.32  Aligned_cols=91  Identities=27%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC------CCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY------TTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------~~~~~   89 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+|+.++|||||.+.+++.      +.+.+
T Consensus        56 Y~~~~~lG~G~fG-~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~  134 (398)
T 4b99_A           56 YEIIETIGNGAYG-VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV  134 (398)
T ss_dssp             EEEEEEEEECSSC-EEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred             eEEEEEEecccCe-EEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence            5677899999999 9999999999999999999755444455677889999999999999998877543      34679


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |+|||||+ |+|++.+...
T Consensus       135 ~ivmE~~~-g~L~~~i~~~  152 (398)
T 4b99_A          135 YVVLDLME-SDLHQIIHSS  152 (398)
T ss_dssp             EEEEECCS-EEHHHHHTSS
T ss_pred             EEEEeCCC-CCHHHHHHhc
Confidence            99999997 4688888653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.80  E-value=5.7e-21  Score=122.38  Aligned_cols=93  Identities=18%  Similarity=0.083  Sum_probs=72.3

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .|.+.+.||+|+|| .||++.+.   .+++.||+|.+............+.+|+.+|+.++|||||.+.+.+.+.+.+|+
T Consensus        25 ~Y~i~~~lG~G~fg-~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           25 QFELLKVLGQGSFG-KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GEEEEEEEECGGGC-EEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             ccEEEEEEecCCCe-EEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46788899999999 99999763   467889999996432222223467889999999999999999999888899999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      |||||+||+|++++...
T Consensus       104 vmEy~~gg~L~~~l~~~  120 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE  120 (304)
T ss_dssp             EECCCTTCEEHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHhc
Confidence            99999999999998653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.80  E-value=5.7e-20  Score=119.08  Aligned_cols=84  Identities=15%  Similarity=0.015  Sum_probs=73.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.++....       ..+|+.+++.++|||||.+.+.+.+.+.+||||||
T Consensus        60 ~~~~~~lG~G~fG-~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           60 MTHQPRVGRGSFG-EVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             EEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eEeCcEeccCCCe-EEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3556679999999 999999999999999999964321       14699999999999999999988888899999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      |+||+|.++++.
T Consensus       132 ~~gg~L~~~l~~  143 (336)
T 4g3f_A          132 LEGGSLGQLIKQ  143 (336)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             cCCCcHHHHHHH
Confidence            999999999865

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.80  E-value=2.1e-19  Score=123.40  Aligned_cols=93  Identities=15%  Similarity=0.160  Sum_probs=80.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...  .....+.+.+|+.+|+.++|||||.+.+.+.+.+.+|++||
T Consensus       158 ~Y~i~~~lG~G~fg-~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          158 HYDIHEELGTGAFG-VVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccEEEEEEeeccCe-EEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            35677899999999 9999999999999999998542  23345678899999999999999999999999999999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      ||+||+|++++....+
T Consensus       235 ~~~gg~L~~~i~~~~~  250 (573)
T 3uto_A          235 FMSGGELFEKVADEHN  250 (573)
T ss_dssp             CCCCCBHHHHHTCTTS
T ss_pred             ecCCCcHHHHHHHhCC
Confidence            9999999999875544

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.76  E-value=1e-18  Score=113.97  Aligned_cols=90  Identities=16%  Similarity=0.015  Sum_probs=72.7

Q ss_pred             hcccccccCCcceEEEEEEcCCC-----CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC-CCeEeeeccCCC-CCce
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRD-----GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH-DNVSITQHTPYT-TRRM   89 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~-----~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~-~~~~   89 (112)
                      .+.+.||+|+|| .||++....+     ++.||+|.+... ......+.+.+|+.+|.++.| ||||.+.+.+.. .+.+
T Consensus        67 ~l~~~LG~G~fG-~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~  144 (353)
T 4ase_A           67 KLGKPLGRGAFG-QVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL  144 (353)
T ss_dssp             EEEEEEEECSSE-EEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred             EEeeEEecCCCe-EEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence            677899999999 9999975433     357999998632 233445678999999999975 899999887755 5679


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |+|||||++|+|.++|+..
T Consensus       145 ~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          145 MVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             EEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEcCCCCCHHHHHHhc
Confidence            9999999999999999753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.73  E-value=1.9e-17  Score=106.94  Aligned_cols=92  Identities=18%  Similarity=0.231  Sum_probs=81.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        16 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           16 NYRLLKTIGKGNFA-KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            56788899999999 99999999999999999996554444556778899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        95 ~~~~~~L~~~l~~  107 (328)
T 3fe3_A           95 YASGGEVFDYLVA  107 (328)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999998854

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.73  E-value=5.1e-18  Score=108.70  Aligned_cols=87  Identities=11%  Similarity=0.018  Sum_probs=66.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC----CceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT----RRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~l   91 (112)
                      +.+.+.||+|+|| .||++..  +++.||+|.+...   .........|+..+..++|||||.+.+.+...    ..+||
T Consensus         5 i~L~~~iG~G~fG-~Vy~~~~--~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            5 IVLQESIGKGRFG-EVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             EEEEEEEEECSSS-EEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEeeCCCe-EEEEEEE--CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            3567889999999 9999986  4788999998532   11122234566666788999999988876542    35899


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      |||||++|+|.++++..
T Consensus        79 V~Ey~~~gsL~~~l~~~   95 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRY   95 (303)
T ss_dssp             EEECCTTCBHHHHHHHC
T ss_pred             EecCCCCCcHHHHHHhC
Confidence            99999999999998653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.72  E-value=2e-17  Score=114.96  Aligned_cols=92  Identities=14%  Similarity=-0.012  Sum_probs=74.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc----CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF----QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.++||+|+|| .||++.+..+++.||+|.+.+..    ........-..++.+++.++|||||.+...+.+.+.+|
T Consensus       190 df~i~k~LG~G~fG-~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          190 DFSVHRIIGRGGFG-EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HeEEEEEEecccCe-EEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            56778899999999 99999999999999999996421    11111222234466778889999999999999989999


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +||||++||+|++++..
T Consensus       269 lVmEy~~GGdL~~~l~~  285 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQ  285 (689)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEecCCCCcHHHHHHh
Confidence            99999999999999865

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.70  E-value=7.5e-17  Score=105.34  Aligned_cols=92  Identities=15%  Similarity=0.108  Sum_probs=80.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..|+|||
T Consensus        30 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           30 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CeEEeeEEecCCCe-EEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45777899999999 99999999999999999996443334445678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|++++..
T Consensus       109 ~~~gg~L~~~l~~  121 (362)
T 2bdw_A          109 LVTGGELFEDIVA  121 (362)
T ss_dssp             CCCSCBHHHHHTT
T ss_pred             cCCCCCHHHHHHH
Confidence            9999999998864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.69  E-value=1.4e-16  Score=102.57  Aligned_cols=101  Identities=19%  Similarity=0.113  Sum_probs=82.3

Q ss_pred             CCCCCccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893          6 TFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus         6 ~~~~~~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      .+....-...+.+.+.||+|+|| .||++.+..++..+|+|.+.......    .....+.+|+.+++.++||||+.+.+
T Consensus         3 ~~~~~~~~~~y~~~~~lG~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~   81 (326)
T 2y0a_A            3 VFRQENVDDYYDTGEELGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE   81 (326)
T ss_dssp             CCBCSCHHHHEEEEEEEECCSSE-EEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccCCcccceEeceEEeeCCCe-EEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            34443333466788899999999 99999999999999999986432111    13467889999999999999999999


Q ss_pred             cCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         82 TPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        82 ~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+.....+++||||+++++|.+++..
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~  107 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAE  107 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTT
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHh
Confidence            88888889999999999999998864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.69  E-value=1.7e-16  Score=103.68  Aligned_cols=93  Identities=17%  Similarity=0.077  Sum_probs=79.3

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      ..|.+.+.||+|+|| .||++.+..++..+|+|.+.......    ...+.+.+|+.++..++||||+.+.+.+.....+
T Consensus        12 ~~y~~~~~LG~G~fg-~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           12 DFYDIGEELGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GTEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hceEEeeEEeeCcCE-EEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            356788899999999 99999999999999999986432211    1246788999999999999999999988888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||+++++|.+++..
T Consensus        91 ~lv~e~~~gg~L~~~l~~  108 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ  108 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999998864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.68  E-value=3.5e-16  Score=102.73  Aligned_cols=94  Identities=12%  Similarity=0.013  Sum_probs=81.6

Q ss_pred             hhhhcccccccC--CcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         14 IGTMMHDEVGLL--SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        14 ~~~~~~~~lg~g--~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      ..|.+.+.||+|  +|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+.+|+
T Consensus        25 ~~y~~~~~lG~G~~~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLM-TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGEEEEEEEEEETTTTE-EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcEEEEecccCCcCCce-EEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            456788899999  999 99999999999999999996544444455778899999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ||||+++++|.+.+...
T Consensus       104 v~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             EEECCTTCBHHHHHHHT
T ss_pred             EEEccCCCCHHHHHhhh
Confidence            99999999999988653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.68  E-value=8.8e-17  Score=107.59  Aligned_cols=93  Identities=15%  Similarity=0.130  Sum_probs=78.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.+|+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..|+|||
T Consensus        12 ~Y~i~~~LG~G~fg-~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           12 EYQLFEELGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HEEEEEEEEEC--C-EEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CeEEEEEeccCCCe-EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            45678899999999 99999999999999999986433323345678899999999999999999998888889999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+|+|++++...
T Consensus        91 ~~~gg~L~~~i~~~  104 (444)
T 3soa_A           91 LVTGGELFEDIVAR  104 (444)
T ss_dssp             CCBCCBHHHHHHHC
T ss_pred             eCCCCCHHHHHHHc
Confidence            99999999988653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.68  E-value=6.4e-17  Score=105.83  Aligned_cols=87  Identities=20%  Similarity=0.132  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   90 (112)
                      .|.+.+.||+|+|| .||++.+.   .+++.||+|.+...    ....++.+|+.+|..+ +||||+.+...+...+.+|
T Consensus        22 ~Y~i~~~lG~G~fg-~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           22 VFKIEDKIGEGTFS-SVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             TCEEEEEEEECSSE-EEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             cEEEEEEEecccCc-EEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            46788899999999 99999753   45778999988532    2235678899999988 5999999999888889999


Q ss_pred             EEEeccCCcchhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWT  106 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~  106 (112)
                      +||||+++++|++.+.
T Consensus        97 lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN  112 (361)
T ss_dssp             EEEECCCCCCHHHHHT
T ss_pred             EEEeCCCcccHHHHHc
Confidence            9999999999998874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.67  E-value=2.4e-16  Score=100.02  Aligned_cols=92  Identities=11%  Similarity=-0.157  Sum_probs=78.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...... ....+.+.+|+..+..++|+||+.+.+.+...+..|+||
T Consensus        32 ~y~i~~~lg~G~~g-~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           32 RYRLLIFHGGVPPL-QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TEEEEEEEEBSTTC-EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEcccCCe-EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            35677899999999 9999999988999999999644322 233477889999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.++.
T Consensus       111 e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          111 EWIRGGSLQEVADT  124 (286)
T ss_dssp             ECCCEEEHHHHHTT
T ss_pred             EecCCCCHHHHHhc
Confidence            99999999998853

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.9e-16  Score=101.03  Aligned_cols=91  Identities=12%  Similarity=0.076  Sum_probs=78.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..++..+|+|.+...   ......+.+|+.+++.++||||+.+.+.+...+.+|++||
T Consensus         6 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            6 KYMIAEDLGRGEFG-IVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ceEeeeEEecCCCe-EEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            45677889999999 9999999999999999998532   2334567899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      |+++++|.+++....
T Consensus        82 ~~~g~~L~~~l~~~~   96 (321)
T 1tki_A           82 FISGLDIFERINTSA   96 (321)
T ss_dssp             CCCCCBHHHHHTSSS
T ss_pred             eCCCCCHHHHHHhcC
Confidence            999999999986543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.67  E-value=1.5e-16  Score=107.18  Aligned_cols=92  Identities=16%  Similarity=0.081  Sum_probs=78.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+.....+|+|||
T Consensus        23 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           23 RYNIVCMLGKGSFG-EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HEEEEEEEECCSSS-EEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceEEeEEEeecCCE-EEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            45678899999999 99999999999999999985432222335678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|++.+..
T Consensus       102 ~~~~~~L~~~~~~  114 (486)
T 3mwu_A          102 LYTGGELFDEIIK  114 (486)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999988854

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.66  E-value=5.9e-16  Score=99.67  Aligned_cols=93  Identities=13%  Similarity=-0.011  Sum_probs=76.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++.   .||+|.+... ......+.+.+|+.++..++||||+.+.+.+...+..|+
T Consensus        50 ~y~i~~~lG~G~~g-~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           50 RIHIEKIIGSGDSG-EVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GEEEEEEEEETTTE-EEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             HeEEeeEEEeCCCc-EEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            44677899999999 999998875554   4999998633 233445678999999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhhhcC
Q psy16893         92 GLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~  109 (112)
                      ||||+++++|.+.+....
T Consensus       128 v~e~~~~~~L~~~l~~~~  145 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD  145 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT
T ss_pred             EeeCCCCCcHHHHHHhcc
Confidence            999999999999886543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.66  E-value=6.1e-16  Score=98.71  Aligned_cols=91  Identities=15%  Similarity=0.119  Sum_probs=78.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+..  ......+.+.+|+.++..++||||+.+.+.+...+..++|||
T Consensus        11 ~~~~~~~lG~G~~g-~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A           11 DLIHGEVLGKGCFG-QAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             GEEEEEEEECCSSE-EEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HeeccceecCCCCE-EEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            45677899999999 999999999999999998843  234445778999999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus        88 ~~~~~~L~~~l~~~  101 (310)
T 3s95_A           88 YIKGGTLRGIIKSM  101 (310)
T ss_dssp             CCTTCBHHHHHHHC
T ss_pred             ecCCCcHHHHHHhc
Confidence            99999999988763

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.66  E-value=2.5e-16  Score=106.40  Aligned_cols=92  Identities=15%  Similarity=0.069  Sum_probs=74.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..++..+|+|.+............+.+|+.+++.++||||+.+.+.+.....+|+|||
T Consensus        38 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           38 MYQRVKKLGSGAYG-EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HEEEEEEEECC----EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEeeEEecCCCE-EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45677899999999 99999999999999999986443223335678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|++.+..
T Consensus       117 ~~~~g~L~~~~~~  129 (494)
T 3lij_A          117 CYKGGELFDEIIH  129 (494)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999988754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.65  E-value=3.6e-16  Score=102.07  Aligned_cols=89  Identities=15%  Similarity=0.075  Sum_probs=77.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+....   .....+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        21 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           21 RYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             TEEEEEEESSSTTS-SEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeccCCCE-EEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            45788899999999 99999999999999999986422   223567889999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+++..
T Consensus        97 ~~~~~~L~~~l~~  109 (361)
T 3uc3_A           97 YASGGELYERICN  109 (361)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             eCCCCCHHHHHHh
Confidence            9999999988854

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.65  E-value=2.5e-16  Score=103.20  Aligned_cols=92  Identities=14%  Similarity=0.122  Sum_probs=77.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++....++..||+|.+... ........+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus       115 ~~~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          115 DLVLGEQIGRGNFG-EVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HeEEeeEeccCCCC-eEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            34677899999999 9999999888999999998632 223334568899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus       193 ~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          193 LVQGGDFLTFLRTE  206 (377)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             cCCCCCHHHHHHhc
Confidence            99999999988653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.65  E-value=2e-16  Score=102.82  Aligned_cols=92  Identities=15%  Similarity=0.126  Sum_probs=77.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc---CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF---QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+....   ......+.+.+|+.+++.++||||+.+.+.+...+.+|+
T Consensus        25 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           25 VYELCEVIGKGPFS-VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ceEEeeEEeeCCCE-EEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45778899999999 99999999999999999985321   111134678899999999999999999988888888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ||||+++++|.+.+..
T Consensus       104 v~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVK  119 (351)
T ss_dssp             EEECCSSCBHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHH
Confidence            9999999999877753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.64  E-value=1.1e-15  Score=97.55  Aligned_cols=100  Identities=21%  Similarity=0.172  Sum_probs=80.0

Q ss_pred             CCCCCCccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccC
Q psy16893          5 KTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTP   83 (112)
Q Consensus         5 ~~~~~~~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~   83 (112)
                      .+|.......+....+.||+|+|| .||++.+..+++.||+|.+....  ......+.+|+.++.++ +||||+.+.+.+
T Consensus         4 ~~~~~~~~~~y~i~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~   80 (316)
T 2ac3_A            4 DSFSGRFEDVYQLQEDVLGEGAHA-RVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFF   80 (316)
T ss_dssp             CSSCCCTTTSCEECCCCCCCCSSE-EEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CccCcccceeEEecCceecCCceE-EEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345544443444445789999999 99999998899999999985432  23346788999999885 699999999888


Q ss_pred             CCCCceEEEEeccCCcchhhhhhh
Q psy16893         84 YTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        84 ~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...+.+|+||||+++++|.+.+..
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~  104 (316)
T 2ac3_A           81 EEEDRFYLVFEKMRGGSILSHIHK  104 (316)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHH
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHhc
Confidence            888889999999999999988865

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.64  E-value=1.4e-15  Score=95.61  Aligned_cols=96  Identities=18%  Similarity=0.113  Sum_probs=79.1

Q ss_pred             ccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC--CCCCc
Q psy16893         11 SDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP--YTTRR   88 (112)
Q Consensus        11 ~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~   88 (112)
                      .....+.+.+.||+|+|| .||++.+..+++.+|+|.+..........+.+.+|+.+++.++||||+.+.+.+  .....
T Consensus         3 ~~~~~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A            3 SRAEDYEVLYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             CCGGGEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred             CchhheeeehhccCCCCc-EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence            344466788899999999 999999998999999999864433444567789999999999999999887755  33667


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+++++|.+.+..
T Consensus        82 ~~lv~e~~~~~~L~~~l~~  100 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITK  100 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEeCCCCCCHHHHHHh
Confidence            8999999999999888754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.64  E-value=4.3e-16  Score=105.07  Aligned_cols=93  Identities=19%  Similarity=0.182  Sum_probs=78.6

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      ..+.+.+.||+|+|| .||++.+..+++.||+|.+...... ......+.+|+.+++.++||||+.+.+.+...+.+|+|
T Consensus        16 ~~Y~l~~~LG~G~fg-~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           16 GHYILGDTLGVGTFG-KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             TTEEEEEEEECCSSS-CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            356788899999999 9999999989999999998532111 12245788999999999999999999988888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+++..
T Consensus        95 ~E~~~gg~L~~~l~~  109 (476)
T 2y94_A           95 MEYVSGGELFDYICK  109 (476)
T ss_dssp             EECCSSEEHHHHTTS
T ss_pred             EeCCCCCcHHHHHHh
Confidence            999999999998864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.64  E-value=1.2e-15  Score=96.97  Aligned_cols=92  Identities=16%  Similarity=0.061  Sum_probs=78.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..++..+|+|.+..... .....+.+.+|+.++..++||||+.+.+.+...+..|++|
T Consensus        12 ~y~i~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           12 RYKIVDKLGGGGMS-TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cEEEEEEEccCCCE-EEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            45677899999999 999999998999999999854322 2334567899999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+++..
T Consensus        91 e~~~g~~L~~~l~~  104 (294)
T 4eqm_A           91 EYIEGPTLSEYIES  104 (294)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999988764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.64  E-value=1.9e-15  Score=99.60  Aligned_cols=91  Identities=14%  Similarity=0.079  Sum_probs=78.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+...  .......+.+|+.+++.++||||+.+.+.+.....+++|||
T Consensus        52 ~y~i~~~LG~G~~g-~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           52 YYDILEELGSGAFG-VVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEecCCCE-EEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            45677899999999 9999999999999999998532  23344578899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+++|.+++...
T Consensus       129 ~~~gg~L~~~l~~~  142 (387)
T 1kob_A          129 FLSGGELFDRIAAE  142 (387)
T ss_dssp             CCCCCBHHHHTTCT
T ss_pred             cCCCCcHHHHHHhh
Confidence            99999999988654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.64  E-value=8e-16  Score=97.92  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=77.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....  ...+.+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        21 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           21 KYTRFEKIGQGASG-TVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             TBCCCEEEEEETTE-EEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceeeeeeeccCCCe-EEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            45677899999999 999999999999999999853322  224567899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus        98 ~~~~~~L~~~~~~  110 (297)
T 3fxz_A           98 YLAGGSLTDVVTE  110 (297)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             CCCCCCHHHHHhh
Confidence            9999999988764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.64  E-value=1.1e-15  Score=97.97  Aligned_cols=67  Identities=16%  Similarity=0.098  Sum_probs=54.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+.+.+.+
T Consensus         7 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   73 (332)
T 3qd2_B            7 DFEPIQCMGRGGFG-VVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAW   73 (332)
T ss_dssp             HEEEEEEEECC-CS-EEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEE
T ss_pred             cCceeeEecCCCCe-EEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            44677899999999 99999999899999999986432 233457789999999999999999877654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.64  E-value=7.6e-16  Score=104.24  Aligned_cols=93  Identities=11%  Similarity=0.062  Sum_probs=75.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-----------hhHHHHHHHHHHHhhCCCCCeEeeeccC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-----------VSSKRVFRELKMLCFFKHDNVSITQHTP   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (112)
                      .|.+.+.||+|+|| .||++.+..++..+|+|.+.......           ...+.+.+|+.+++.++||||+.+.+.+
T Consensus        37 ~Y~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           37 SYFKVRKLGSGAYG-EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             TEEEEEEEEC--CE-EEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceEEEeEecccCCe-EEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            34677899999999 99999999999999999986432111           2245688999999999999999999988


Q ss_pred             CCCCceEEEEeccCCcchhhhhhhc
Q psy16893         84 YTTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        84 ~~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .....+|+||||+++++|.+.+...
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~~  140 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIINR  140 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHHc
Confidence            8888899999999999999988653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.64  E-value=1.1e-15  Score=96.82  Aligned_cols=91  Identities=13%  Similarity=0.053  Sum_probs=75.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+...+.+++||||
T Consensus         4 y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   82 (292)
T 3o0g_A            4 YEKLEKIGEGTYG-TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             EEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceeeeEecCCCCe-EEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence            4567899999999 999999999999999999965443344456788999999999999999999988888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+ ++.+.+...
T Consensus        83 ~~~-~l~~~~~~~   94 (292)
T 3o0g_A           83 CDQ-DLKKYFDSC   94 (292)
T ss_dssp             CSE-EHHHHHHHT
T ss_pred             CCC-CHHHHHHhC
Confidence            987 456655443

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.63  E-value=1.6e-15  Score=99.35  Aligned_cols=92  Identities=13%  Similarity=0.024  Sum_probs=76.1

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++...   ..+..||+|.+... ......+.+.+|+.++..++||||+.+.+.+...+.+|+
T Consensus        46 ~~~~~~~lG~G~fg-~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           46 NISIDKVVGAGEFG-EVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GCCCCEEEEECSSS-EEEEC-CBCTTSCBCCEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hceeeeEEeeCCCe-EEEEEEEecCCCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            45677899999999 99998765   45677999998643 233445678999999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ||||+++++|.+++...
T Consensus       124 v~e~~~~~sL~~~l~~~  140 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH  140 (373)
T ss_dssp             EEECCTTCBHHHHHHTT
T ss_pred             EEeCCCCCcHHHHHHhC
Confidence            99999999999988654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.63  E-value=1.2e-15  Score=96.04  Aligned_cols=93  Identities=15%  Similarity=0.105  Sum_probs=79.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..+++||
T Consensus         7 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   85 (284)
T 3kk8_A            7 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   85 (284)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhhhhhhhcCcCCe-EEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            45677899999999 99999999999999999986544444455778899999999999999999988888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+++|.+.+...
T Consensus        86 ~~~~~~l~~~~~~~   99 (284)
T 3kk8_A           86 LVTGGELFEDIVAR   99 (284)
T ss_dssp             CCCSCBHHHHHHHH
T ss_pred             cCCCCCHHHHHHhc
Confidence            99999998877543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.63  E-value=1.5e-15  Score=97.16  Aligned_cols=90  Identities=16%  Similarity=0.092  Sum_probs=76.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++..  .+..||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+.+++|||
T Consensus        38 ~y~i~~~lG~G~~g-~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           38 DLNIKEKIGAGSFG-TVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred             HceeeeEeecCCCe-EEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence            44677899999999 9999976  47789999986544344445678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       115 ~~~~~~L~~~l~~  127 (309)
T 3p86_A          115 YLSRGSLYRLLHK  127 (309)
T ss_dssp             CCTTCBHHHHHHS
T ss_pred             cCCCCcHHHHHhh
Confidence            9999999988764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.63  E-value=5.3e-16  Score=99.84  Aligned_cols=92  Identities=15%  Similarity=0.067  Sum_probs=75.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+.+.+.+...+..|++||
T Consensus         8 ~y~i~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            8 DWDLVQTLGEGAYG-EVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             CEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hceeeeEEecCCCE-EEEEEEECCCCcEEEEEEEEccc-ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            45677899999999 99999999899999999985321 12223567889999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+++..+
T Consensus        86 ~~~~~~L~~~l~~~   99 (323)
T 3tki_A           86 YCSGGELFDRIEPD   99 (323)
T ss_dssp             CCTTEEGGGGSBTT
T ss_pred             cCCCCcHHHHHhhc
Confidence            99999999988653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.63  E-value=1.7e-15  Score=97.20  Aligned_cols=100  Identities=20%  Similarity=0.114  Sum_probs=81.3

Q ss_pred             CCCCccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCCCCCeEeeecc
Q psy16893          7 FSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFKHDNVSITQHT   82 (112)
Q Consensus         7 ~~~~~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~   82 (112)
                      +........+.+.+.||+|+|| .||++.+..++..+|+|.+.......    .....+.+|+.++..+.||||+.+.+.
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   83 (321)
T 2a2a_A            5 FKQQKVEDFYDIGEELGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDV   83 (321)
T ss_dssp             CBCSCHHHHEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccchhhhccEEEeeEeeecCCE-EEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            3333333456788899999999 99999999899999999986432111    134678899999999999999999888


Q ss_pred             CCCCCceEEEEeccCCcchhhhhhh
Q psy16893         83 PYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        83 ~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +...+..+++|||+++++|.+.+..
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~  108 (321)
T 2a2a_A           84 YENRTDVVLILELVSGGELFDFLAQ  108 (321)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHT
T ss_pred             EecCCEEEEEEEcCCCCcHHHHHHh
Confidence            8888889999999999999998864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.63  E-value=5.2e-16  Score=100.60  Aligned_cols=92  Identities=15%  Similarity=0.055  Sum_probs=77.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.++..++||||+.+...+...+.+|+||
T Consensus         6 ~y~~~~~lG~G~fg-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            6 DFDYLKLLGKGTFG-KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HeEEEEEEecCCCe-EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            45677899999999 999999999999999999864311 1123456788999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus        85 E~~~gg~L~~~l~~   98 (337)
T 1o6l_A           85 EYANGGELFFHLSR   98 (337)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             eCCCCCcHHHHHHh
Confidence            99999999888764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.63  E-value=1.5e-15  Score=96.81  Aligned_cols=91  Identities=22%  Similarity=0.094  Sum_probs=76.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.+|+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..++||||
T Consensus         5 y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            5 YEKIGKIGEGSYG-VVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEeeEEeecCCe-EEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            4567899999999 999999999999999998864433334456788999999999999999999888888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      ++++++.+.+..
T Consensus        84 ~~~~~l~~~~~~   95 (311)
T 4agu_A           84 CDHTVLHELDRY   95 (311)
T ss_dssp             CSEEHHHHHHHT
T ss_pred             CCCchHHHHHhh
Confidence            999888776653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.62  E-value=1.3e-15  Score=102.49  Aligned_cols=93  Identities=15%  Similarity=0.073  Sum_probs=79.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...... ......+.+|+.+++.++||||+.+.+.+...+.+|+||
T Consensus        27 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           27 RYKGQRVLGKGSFG-EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEeeEEecCCCE-EEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            45677899999999 9999999999999999998543221 233567889999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+.+++|++++...
T Consensus       106 e~~~~~~L~~~~~~~  120 (484)
T 3nyv_A          106 EVYTGGELFDEIISR  120 (484)
T ss_dssp             CCCCSCBHHHHHHTC
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999999988653

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=100.71  Aligned_cols=92  Identities=16%  Similarity=0.090  Sum_probs=78.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||.+.+..+++.+|+|.+.... ........+.+|+.++..++||||+.+...+...+.+|+||
T Consensus        16 ~y~i~~~LG~G~fG-~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           16 HFEILRAIGKGSFG-KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GEEEEEEEECCTTC-CEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HeEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            56788899999999 99999999999999999985322 11123467889999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+|+|.+.+..
T Consensus        95 e~~~gg~L~~~l~~  108 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQ  108 (384)
T ss_dssp             CCCTTEEHHHHHHT
T ss_pred             ecCCCCcHHHHHHh
Confidence            99999999888864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.62  E-value=2.3e-15  Score=97.76  Aligned_cols=93  Identities=14%  Similarity=-0.006  Sum_probs=78.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l   91 (112)
                      ..+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|..++..+ +||||+.+.+.+...+.+|+
T Consensus         9 ~~y~~~~~lG~G~fg-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYA-KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hheEEEEEEEecCCe-EEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            356778899999999 999999999999999999964432 233356678899999887 79999999998888888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ||||+++++|.+.+..
T Consensus        88 v~e~~~gg~L~~~l~~  103 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQR  103 (345)
T ss_dssp             EECCCCSCBHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHH
Confidence            9999999999888764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.62  E-value=1.8e-15  Score=95.15  Aligned_cols=92  Identities=15%  Similarity=0.075  Sum_probs=78.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+..+..+ +||||+.+.+.+...+..+++|
T Consensus        12 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           12 EFHELEKIGSGEFG-SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhhhhhhcCCCce-EEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            45677899999999 999999988999999999865433344556788999999998 8999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        91 e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           91 EYCNGGSLADAISE  104 (289)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             EecCCCcHHHHHHh
Confidence            99999999988864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.62  E-value=1.3e-15  Score=99.89  Aligned_cols=87  Identities=13%  Similarity=0.115  Sum_probs=70.0

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .+.||+|+|| .||++.+..++..||+|.+...  .....+.+.+|+.++..++||||+.+.+.+...+.+++||||+++
T Consensus        94 ~~~lG~G~~g-~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  170 (373)
T 2x4f_A           94 TEILGGGRFG-QVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG  170 (373)
T ss_dssp             EEECC------CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceEEecCcCE-EEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            3579999999 9999999889999999998532  223456788999999999999999999988888889999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      ++|.+++...
T Consensus       171 ~~L~~~l~~~  180 (373)
T 2x4f_A          171 GELFDRIIDE  180 (373)
T ss_dssp             CEEHHHHHHT
T ss_pred             CcHHHHHHhc
Confidence            9998888643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.62  E-value=1.6e-15  Score=98.69  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=77.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.++..++||||+.+...+.+.+.+|+||
T Consensus        42 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           42 QFDRIKTLGTGSFG-RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HCEEEEEeecCcCc-EEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            55777899999999 999999999999999999853211 1123456788999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus       121 e~~~gg~L~~~l~~  134 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR  134 (350)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             cCCCCCcHHHHHHH
Confidence            99999999998864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.62  E-value=8.9e-16  Score=98.75  Aligned_cols=92  Identities=17%  Similarity=0.117  Sum_probs=77.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .....+.+.+|+.++..++||||+.+.+.+.+.+.+|++|
T Consensus         7 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            7 DFQILRTLGTGSFG-RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            45677899999999 999999999999999999864311 1122456778999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        86 e~~~gg~L~~~l~~   99 (318)
T 1fot_A           86 DYIEGGELFSLLRK   99 (318)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHH
Confidence            99999999998865

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.62  E-value=2.1e-15  Score=98.54  Aligned_cols=92  Identities=17%  Similarity=0.118  Sum_probs=74.6

Q ss_pred             hhhcccccccCCcceEEEEEE-----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT-----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~-----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.     +..++..||+|.+... ........+.+|+.++..++||||+.+.+.+......
T Consensus        72 ~~~~~~~LG~G~fg-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           72 NITLIRGLGHGAFG-EVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GEEEEEECCCCSSS-CEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HeEEeeEeeeCCCE-EEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34577889999999 999998     4456778999998532 2334456788999999999999999999988888888


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |+||||+++++|.+.+...
T Consensus       150 ~lv~e~~~~g~L~~~l~~~  168 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRET  168 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHH
T ss_pred             EEEEEeCCCCCHHHHHHhh
Confidence            9999999999999988653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.62  E-value=4.3e-16  Score=103.39  Aligned_cols=93  Identities=15%  Similarity=0.058  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|+.++..++||||+.+...+.+.+.+|+||
T Consensus        70 ~y~~~~~LG~G~fG-~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~  148 (410)
T 3v8s_A           70 DYEVVKVIGRGAFG-EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  148 (410)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEcCCCE-EEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            44677899999999 999999999999999999853211 0111234678999999999999999999888888999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++|+|.+.+...
T Consensus       149 E~~~gg~L~~~l~~~  163 (410)
T 3v8s_A          149 EYMPGGDLVNLMSNY  163 (410)
T ss_dssp             CCCTTEEHHHHHHHC
T ss_pred             eCCCCCcHHHHHHcC
Confidence            999999999987643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=1.1e-15  Score=98.59  Aligned_cols=91  Identities=12%  Similarity=0.094  Sum_probs=77.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc---CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF---QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+....   ......+.+.+|+.+++.++||||+.+.+.+...+..++
T Consensus        27 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           27 KYHLKGAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             heeecceeeecCCe-EEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            45678899999999 99999999999999999885321   122345678899999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      ||||+++++|.+.+.
T Consensus       106 v~e~~~gg~L~~~l~  120 (345)
T 3hko_A          106 VMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEECCCSCBHHHHEE
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999998874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.61  E-value=2.3e-15  Score=96.47  Aligned_cols=92  Identities=16%  Similarity=0.077  Sum_probs=75.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+.+.+.+..  ...+++|
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A           10 LWLLSDILGQGATA-NVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             EEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CEEEEEEecCCCCe-EEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            45677899999999 999999999999999999864321 2234667899999999999999988876654  3478999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      |||+++++|.+.+...
T Consensus        88 ~e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEP  103 (319)
T ss_dssp             EECCTTCBHHHHHHSG
T ss_pred             EeCCCCCCHHHHHHHh
Confidence            9999999999888653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.61  E-value=2.3e-15  Score=95.18  Aligned_cols=91  Identities=16%  Similarity=0.139  Sum_probs=77.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... .....+.+.+|+.+++.++||||+.+.+.+......++|||
T Consensus        23 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           23 LFIFKRKLGSGAFG-DVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             heeecceeccCCCe-EEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            45777899999999 99999999899999999986432 22335678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       101 ~~~~~~L~~~l~~  113 (285)
T 3is5_A          101 TCEGGELLERIVS  113 (285)
T ss_dssp             CCSCCBHHHHHHH
T ss_pred             eCCCCcHHHHHHh
Confidence            9999999888743

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.61  E-value=1.6e-15  Score=102.64  Aligned_cols=88  Identities=14%  Similarity=0.008  Sum_probs=76.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++....++..||+|.+....   ...+.+.+|+.+++.++||||+.+.+.+...+.+|+||||
T Consensus       222 ~~~~~~lG~G~fg-~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          222 ITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             EEEEEESGGGTTS-SEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             ceeeeEecCCCCe-EEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            4677899999999 99999988888999999986432   2356789999999999999999999988888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+++|.+++..
T Consensus       298 ~~~g~L~~~l~~  309 (495)
T 1opk_A          298 MTYGNLLDYLRE  309 (495)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             cCCCCHHHHHHh
Confidence            999999999865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.61  E-value=5.5e-15  Score=93.26  Aligned_cols=92  Identities=13%  Similarity=-0.029  Sum_probs=74.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhh-----HHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVS-----SKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.........     .+.+.+|+.++..++||||+.+.+.+....  
T Consensus        20 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           20 EIEYEKQIGKGGFG-LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TEEEEEECCCCSSS-CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             cceehhccccCCce-eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            44677899999999 9999999889999999998543221111     167889999999999999999888776654  


Q ss_pred             EEEEeccCCcchhhhhhhcC
Q psy16893         90 YPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~~  109 (112)
                      +++|||+++++|.+.+....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~  116 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKA  116 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTT
T ss_pred             eEEEEecCCCCHHHHHhccc
Confidence            79999999999988886543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.61  E-value=1.9e-15  Score=94.34  Aligned_cols=92  Identities=12%  Similarity=-0.113  Sum_probs=76.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--CceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+.  +..+|+|.+..........+.+.+|+.+++.++||||+.+.+.+...  +..+++
T Consensus        11 ~y~~~~~lg~G~~g-~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           11 QLNFLTKLNENHSG-ELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GCEEEEEEEEETTE-EEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HhHHHHHhcCCCcc-eEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            55777899999999 99999875  77899999865444445567789999999999999999988877664  778999


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      |||+++++|.+.+....
T Consensus        88 ~e~~~~~~L~~~l~~~~  104 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGT  104 (271)
T ss_dssp             EECCTTCBHHHHHHSCS
T ss_pred             ecccCCCcHHHHHhhcc
Confidence            99999999999887543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.60  E-value=5e-15  Score=92.75  Aligned_cols=91  Identities=11%  Similarity=0.037  Sum_probs=76.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+. .+..||+|.+....   ...+.+.+|+.++..++||||+.+.+.+...+..+++||
T Consensus        11 ~y~~~~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A           11 ELTFVQEIGSGQFG-LVHLGYWL-NKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hceeeheecCCCcc-EEEEEEec-CCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            45777899999999 99999876 46679999986432   223568899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      |+++++|.+.+....+
T Consensus        86 ~~~~~~L~~~l~~~~~  101 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRG  101 (269)
T ss_dssp             CCTTCBHHHHHHTTTT
T ss_pred             eCCCCcHHHHHHhcCc
Confidence            9999999998865443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.60  E-value=1.6e-15  Score=97.63  Aligned_cols=92  Identities=14%  Similarity=0.065  Sum_probs=73.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        35 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  113 (329)
T 3gbz_A           35 RYRRITKLGEGTYG-EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE  113 (329)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hEEEEEEEEecCCe-EEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence            45778899999999 99999999999999999996443333334567789999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+ +|.+.+...
T Consensus       114 ~~~~-~L~~~~~~~  126 (329)
T 3gbz_A          114 YAEN-DLKKYMDKN  126 (329)
T ss_dssp             CCSE-EHHHHHHHC
T ss_pred             cCCC-CHHHHHhhc
Confidence            9985 788877643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.60  E-value=5.7e-15  Score=96.64  Aligned_cols=92  Identities=13%  Similarity=0.069  Sum_probs=75.5

Q ss_pred             hhhcccccccCCcceEEEEEEcC-------CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-------RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-------~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++.+.       .++..||+|.+... ......+.+.+|+.+++.+ +||||+.+.+.+...
T Consensus        82 ~~~~~~~LG~G~fg-~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           82 KLTLGKPLGEGCFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GEEEEEEESCCSSS-EEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HCEeeeEEeeCCCe-eEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            44677899999999 99999753       34557999998643 2233456789999999999 799999999988888


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+|+||||+++++|.+++...
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhh
Confidence            8899999999999999988754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.60  E-value=4.8e-15  Score=94.88  Aligned_cols=92  Identities=17%  Similarity=0.111  Sum_probs=72.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+. +++.+|+|.+............+.+|+.+++.++||||+.+.+.+...+.+++|||
T Consensus        22 ~y~~~~~lG~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           22 KYQKLEKVGEGTYG-VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             EEEEEEEEEECSSC-EEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             hhHhhhhccCCCCe-EEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            45677899999999 99999875 58899999986443333334678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      |+++ ++.+.+....
T Consensus       100 ~~~~-~l~~~~~~~~  113 (311)
T 3niz_A          100 FMEK-DLKKVLDENK  113 (311)
T ss_dssp             CCSE-EHHHHHHTCT
T ss_pred             CCCC-CHHHHHHhcc
Confidence            9986 6777665443

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.60  E-value=4.5e-15  Score=99.32  Aligned_cols=91  Identities=24%  Similarity=0.292  Sum_probs=66.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-----CCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-----YTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-----~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++|+||+.+.+.+     .....+
T Consensus        54 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           54 RYEIRHLIGTGSYG-HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TEEECCC--------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CeEEeeEeeecCCe-EEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            45778899999999 999999999999999999965544455567889999999999999999888766     334679


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||+. ++|.+.+..
T Consensus       133 ~lv~e~~~-~~L~~~~~~  149 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFRT  149 (458)
T ss_dssp             EEEECCCS-EEHHHHHHS
T ss_pred             EEEEeccc-cchhhhccc
Confidence            99999986 567777754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.60  E-value=1.6e-15  Score=98.89  Aligned_cols=92  Identities=15%  Similarity=0.032  Sum_probs=76.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .........+|..++..+ +||||+.+...+...+.+|+|
T Consensus        24 ~y~~~~~lG~G~fg-~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv  102 (353)
T 3txo_A           24 NFEFIRVLGKGSFG-KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV  102 (353)
T ss_dssp             CEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             heEEEEEEeeCCCE-EEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence            45777899999999 999999999999999999864311 122345678899999988 699999999988888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+.+..
T Consensus       103 ~E~~~gg~L~~~l~~  117 (353)
T 3txo_A          103 MEFVNGGDLMFHIQK  117 (353)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHH
Confidence            999999999988864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.60  E-value=3.3e-15  Score=94.38  Aligned_cols=92  Identities=16%  Similarity=0.081  Sum_probs=78.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+...+..|+++|
T Consensus        23 ~y~i~~~lg~G~~g-~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           23 RYNIVCMLGKGSFG-EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceeeEEEcCCCCE-EEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            44677899999999 99999998899999999986443333345678899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       102 ~~~~~~L~~~l~~  114 (287)
T 2wei_A          102 LYTGGELFDEIIK  114 (287)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             ccCCCCHHHHHHh
Confidence            9999999887754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.60  E-value=4.7e-15  Score=98.77  Aligned_cols=91  Identities=21%  Similarity=0.269  Sum_probs=76.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC-----Cce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT-----RRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~   89 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+++.+|+.+++.++|+||+.+.+.+...     ..+
T Consensus        27 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           27 NYIIKHLIGRGSYG-YVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CEEEEEEEeecCCE-EEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence            45778899999999 999999999999999999975544445567889999999999999999888766543     679


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||+.+ +|.+.++.
T Consensus       106 ~lv~e~~~~-~L~~~~~~  122 (432)
T 3n9x_A          106 YIVLEIADS-DLKKLFKT  122 (432)
T ss_dssp             EEEEECCSE-EHHHHHHS
T ss_pred             EEEEecCCc-CHHHHHhc
Confidence            999999975 78887764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.60  E-value=7.8e-15  Score=93.46  Aligned_cols=91  Identities=13%  Similarity=-0.000  Sum_probs=76.1

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+     ..++..||+|.+... ......+.+.+|+.+++.++||||+.+.+.+...+..
T Consensus        24 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           24 NLVLGKTLGEGEFG-KVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             heeeeeeecccCCe-eEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            45677899999999 9999976     345578999998632 2334457788999999999999999999888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+++..
T Consensus       102 ~lv~e~~~~~~L~~~l~~  119 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRE  119 (314)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEeecCCCCHHHHHHH
Confidence            999999999999998865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.59  E-value=1e-15  Score=99.24  Aligned_cols=91  Identities=19%  Similarity=0.162  Sum_probs=75.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...... ......+.+|+.+++.++||||+.+.+.+...+.+++||
T Consensus        10 ~Y~i~~~lG~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B           10 PYIIRETLGEGSFG-KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEecCCCe-EEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45788899999999 9999999999999999998532111 112356889999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+ +|+|++.+..
T Consensus        89 E~~-~g~l~~~l~~  101 (336)
T 3h4j_B           89 EYA-GGELFDYIVE  101 (336)
T ss_dssp             CCC-CEEHHHHHHH
T ss_pred             ECC-CCcHHHHHHH
Confidence            999 5788888754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.59  E-value=4.2e-15  Score=95.70  Aligned_cols=91  Identities=21%  Similarity=0.119  Sum_probs=76.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        26 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           26 KYENLGLVGEGSYG-MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GEEEEEEGGGGTTS-SEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hheeeeEEeecCCE-EEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            45677899999999 99999999999999999986443333445667899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhh
Q psy16893         95 LRLGEVHVRRWT  106 (112)
Q Consensus        95 ~~~~~~l~~~~~  106 (112)
                      |+.++++.+.+.
T Consensus       105 ~~~~~~l~~~~~  116 (331)
T 4aaa_A          105 FVDHTILDDLEL  116 (331)
T ss_dssp             CCSEEHHHHHHH
T ss_pred             cCCcchHHHHHh
Confidence            999987766543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.59  E-value=8.8e-16  Score=102.62  Aligned_cols=92  Identities=12%  Similarity=0.019  Sum_probs=75.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|..++..++||||+.+...+.+.+.+|+||
T Consensus        75 ~y~~~~~LG~G~fG-~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~  153 (437)
T 4aw2_A           75 DFEILKVIGRGAFG-EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM  153 (437)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEEeCCCE-EEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence            34667899999999 999999998999999999853211 0111233778999999999999999999888888999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus       154 Ey~~gg~L~~~l~~  167 (437)
T 4aw2_A          154 DYYVGGDLLTLLSK  167 (437)
T ss_dssp             CCCTTCBHHHHHHT
T ss_pred             ecCCCCcHHHHHHH
Confidence            99999999998865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.59  E-value=2.6e-15  Score=97.39  Aligned_cols=92  Identities=15%  Similarity=0.044  Sum_probs=75.2

Q ss_pred             hhhcccccccCCcceEEEEEE-----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT-----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~-----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~   87 (112)
                      .+.+.+.||+|+|| .||++.     ...+++.||+|.+... ......+.+.+|+.++..+ +||||+.+.+.+.. ..
T Consensus        23 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           23 RLKLGKPLGRGAFG-QVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             ceeeceeecCCCCc-eEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            44677899999999 999997     5567788999998633 2333456789999999999 69999998887666 45


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .++++|||+.+|+|.+.+...
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTT
T ss_pred             ceEEEEEecCCCcHHHHHHhc
Confidence            589999999999999998754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.59  E-value=1.8e-15  Score=99.99  Aligned_cols=92  Identities=13%  Similarity=0.000  Sum_probs=75.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+...... ......+..|..++..+ +||||+.+.+.+...+.+|+|
T Consensus        53 ~y~~~~~LG~G~fG-~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           53 DFDLLRVIGRGSYA-KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             HcEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            45677899999999 9999999999999999999644222 22234577888888776 799999999988888899999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+.+..
T Consensus       132 ~E~~~gg~L~~~l~~  146 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQR  146 (396)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EEcCCCCcHHHHHHH
Confidence            999999999888864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.59  E-value=3.4e-15  Score=95.40  Aligned_cols=92  Identities=18%  Similarity=0.132  Sum_probs=78.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.++..++||||+.+.+.+...+.+|++|
T Consensus        35 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           35 PYRLRRLVGRGGMG-DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CEEEEEEEEECSSS-EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEcCCCCe-eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            45788899999999 999999988899999999864322 2223467889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus       114 e~~~~~~L~~~l~~  127 (309)
T 2h34_A          114 RLINGVDLAAMLRR  127 (309)
T ss_dssp             ECCCCEEHHHHHHH
T ss_pred             EecCCCCHHHHHHh
Confidence            99999999988764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.59  E-value=7.3e-15  Score=92.65  Aligned_cols=89  Identities=13%  Similarity=0.012  Sum_probs=77.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+...   ....+.+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus        14 ~~~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           14 DITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             GEEEEEESGGGTTC-SEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ceeEEeecCCCCce-eEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            55788899999999 9999999888999999998532   2345678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus        90 ~~~~~~L~~~~~~  102 (288)
T 3kfa_A           90 FMTYGNLLDYLRE  102 (288)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999998865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.59  E-value=3.9e-15  Score=98.13  Aligned_cols=91  Identities=16%  Similarity=0.081  Sum_probs=75.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+.+.+.+..  ....++|
T Consensus        10 ~y~i~~~LG~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A           10 LWLLSDILGQGATA-NVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             EEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             ceEEEEEEEcCCCe-EEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            45677899999999 999999999999999999864321 2234667889999999999999988876654  3378999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+.+..
T Consensus        88 ~e~~~~g~L~~~l~~  102 (396)
T 4eut_A           88 MEFCPCGSLYTVLEE  102 (396)
T ss_dssp             ECCCTTEEHHHHTTS
T ss_pred             EecCCCCCHHHHHHh
Confidence            999999999988865

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.59  E-value=2.2e-15  Score=97.87  Aligned_cols=88  Identities=22%  Similarity=0.125  Sum_probs=70.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...    ...+.+.+|+.++..++||||+.+.+.+...+.++++||
T Consensus        54 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           54 FFEVESELGRGATS-IVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEeeCCCE-EEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            35677899999999 9999999888999999998532    123567789999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus       129 ~~~~~~L~~~l~~  141 (349)
T 2w4o_A          129 LVTGGELFDRIVE  141 (349)
T ss_dssp             CCCSCBHHHHHTT
T ss_pred             eCCCCCHHHHHHh
Confidence            9999999998864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.59  E-value=1.3e-15  Score=97.38  Aligned_cols=92  Identities=18%  Similarity=0.093  Sum_probs=74.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC----ce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR----RM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.++..++||||+.+.+.+....    ..
T Consensus        13 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           13 RYELGEILGFGGMS-EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cEEEEEEEccCCCE-EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            45788899999999 999999988999999999964322 2233467889999999999999998877654422    35


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||+++++|.+.+..
T Consensus        92 ~lv~e~~~g~~L~~~l~~  109 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHT  109 (311)
T ss_dssp             EEEEECCCEEEHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999988754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.59  E-value=6.7e-15  Score=93.03  Aligned_cols=92  Identities=16%  Similarity=0.001  Sum_probs=76.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC----CCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY----TTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+..........+.+.+|+.+++.++||||+.+.+.+.    ....++
T Consensus        27 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           27 FLKFDIEIGRGSFK-TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eEEeeeeccCCCCe-EEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            34667789999999 9999999999999999998654444455677899999999999999998776443    256689


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +||||+++++|.+.+..
T Consensus       106 lv~e~~~~~~L~~~l~~  122 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKR  122 (290)
T ss_dssp             EEEECCCSCBHHHHHHH
T ss_pred             EEEEecCCCCHHHHHHH
Confidence            99999999999988864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.59  E-value=3.3e-15  Score=93.88  Aligned_cols=94  Identities=18%  Similarity=0.124  Sum_probs=77.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.+++.++||||+.+.+.+...+..|++|
T Consensus        12 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           12 DFKVGNLLGKGSFA-GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceeeeeecCCCce-EEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            45677899999999 999999988999999999853211 1112467889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhhcC
Q psy16893         94 TLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~  109 (112)
                      ||+++++|.+.+....
T Consensus        91 e~~~~~~L~~~l~~~~  106 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRV  106 (278)
T ss_dssp             ECCTTEEHHHHHHTCS
T ss_pred             ecCCCCcHHHHHhhcc
Confidence            9999999988886543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.59  E-value=3.4e-15  Score=93.69  Aligned_cols=93  Identities=20%  Similarity=0.181  Sum_probs=77.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      ..+.+.+.||+|+|| .||.+.+..+++.||+|.+..... .......+.+|+.+++.++||||+.+.+.+...+..|++
T Consensus        11 ~~y~i~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFG-KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             TTEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEeeecCCCCe-EEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            356778899999999 999999988999999999853211 112245788999999999999999998888888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+.+..
T Consensus        90 ~e~~~~~~L~~~l~~  104 (276)
T 2h6d_A           90 MEYVSGGELFDYICK  104 (276)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeccCCCcHHHHHhc
Confidence            999999999888754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.59  E-value=7.8e-15  Score=94.48  Aligned_cols=83  Identities=14%  Similarity=0.148  Sum_probs=72.7

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      +.||+|+|| .||++.+..+++.||+|.+..     .......+|+.++..+. ||||+.+.+.+.+....|+||||+++
T Consensus        17 ~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~   90 (325)
T 3kn6_A           17 KPLGEGSFS-ICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG   90 (325)
T ss_dssp             CCSEEETTE-EEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             CccccCCCe-EEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence            579999999 999999999999999999853     22356678999999997 99999999988888889999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      ++|.+++...
T Consensus        91 ~~L~~~l~~~  100 (325)
T 3kn6_A           91 GELFERIKKK  100 (325)
T ss_dssp             CBHHHHHHHC
T ss_pred             CcHHHHHHhc
Confidence            9999988654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.59  E-value=4.1e-15  Score=93.39  Aligned_cols=90  Identities=21%  Similarity=0.200  Sum_probs=77.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.....  ...+.+.+|+.+++.++||||+.+.+.+...+..+++||
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A           10 YYTLENTIGRGSWG-EVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hEEeeeEEeecCCE-EEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            45777899999999 999999998999999999864322  234678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+++..
T Consensus        87 ~~~~~~L~~~~~~   99 (277)
T 3f3z_A           87 LCTGGELFERVVH   99 (277)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999888754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.59  E-value=1.5e-15  Score=100.86  Aligned_cols=92  Identities=12%  Similarity=0.019  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.+... .......+.+|..++..++|+||+.+...+.+.+.+|+||
T Consensus        62 ~f~~~~~lG~G~fG-~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm  140 (412)
T 2vd5_A           62 DFEILKVIGRGAFS-EVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM  140 (412)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hEEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            44677899999999 999999999999999999853211 1112234778999999999999999998888888999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus       141 E~~~gg~L~~~l~~  154 (412)
T 2vd5_A          141 EYYVGGDLLTLLSK  154 (412)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             cCCCCCcHHHHHHh
Confidence            99999999998865

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.58  E-value=7.8e-15  Score=92.31  Aligned_cols=92  Identities=20%  Similarity=0.140  Sum_probs=77.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+.......    ...+.+.+|+.+++.++||||+.+.+.+......+
T Consensus         6 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            6 HYEMGEELGSGQFA-IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhHHhhcccCce-EEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45677899999999 99999999899999999886432111    12467889999999999999999988888888899


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+++++|.+++..
T Consensus        85 lv~e~~~~~~L~~~l~~  101 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE  101 (283)
T ss_dssp             EEEECCCSCBHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHh
Confidence            99999999999988754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.58  E-value=5.9e-15  Score=93.50  Aligned_cols=92  Identities=20%  Similarity=0.160  Sum_probs=75.3

Q ss_pred             hhhhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CC
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TR   87 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~   87 (112)
                      ..+.+.+.||+|+|| .||++.    +..+++.||+|.+...  .....+.+.+|+.++..++||||+.+.+.+..  ..
T Consensus        10 ~~~~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFG-SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             GGEEEEEEEEECSSE-EEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             HHhhhhheeeccCCE-EEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            355788899999999 999997    5667889999998532  33445678899999999999999988876644  35


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .+++||||+++++|.+.+...
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~  107 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKH  107 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHC
T ss_pred             ceEEEEEeCCCCCHHHHHHhc
Confidence            589999999999999988654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.58  E-value=7.6e-15  Score=92.00  Aligned_cols=91  Identities=14%  Similarity=0.050  Sum_probs=77.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+.+.+.+...+..|++||
T Consensus         8 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            8 DWDLVQTLGEGAYG-EVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEeecCCCc-EEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            45677899999999 99999998899999999985332 22345678899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        86 ~~~~~~L~~~l~~   98 (276)
T 2yex_A           86 YCSGGELFDRIEP   98 (276)
T ss_dssp             CCTTEEGGGGSBT
T ss_pred             ecCCCcHHHHHhh
Confidence            9999999988764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.58  E-value=3.1e-15  Score=94.63  Aligned_cols=90  Identities=17%  Similarity=0.046  Sum_probs=73.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||++.+ .+++.+|+|.+............+.+|+.+++.++||||+.+.+.+...+.++++|||
T Consensus         4 y~~~~~lg~G~~g-~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            4 YHGLEKIGEGTYG-VVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             EEEEEEEEEETTE-EEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             chhhhhcccCCCE-EEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4567899999999 9999987 6788999999864332222346678999999999999999999888888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+ +|.+.+...
T Consensus        82 ~~~-~l~~~~~~~   93 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC   93 (288)
T ss_dssp             CSE-EHHHHHHTS
T ss_pred             cCC-CHHHHHHhc
Confidence            986 777777553

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.58  E-value=8.7e-15  Score=95.15  Aligned_cols=90  Identities=18%  Similarity=0.132  Sum_probs=74.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+....... ...+.+.+|+.+++.++||||+.+.+.+...+..|+|||
T Consensus        56 y~~~~~lG~G~~g-~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           56 FSDLREIGHGSFG-AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeeeeEEccCCCE-EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            4566789999999 99999988899999999986432222 234678899999999999999999988888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.| ++.+.+..
T Consensus       135 ~~~g-~l~~~l~~  146 (348)
T 1u5q_A          135 YCLG-SASDLLEV  146 (348)
T ss_dssp             CCSE-EHHHHHHH
T ss_pred             cCCC-CHHHHHHH
Confidence            9985 67776654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.58  E-value=7e-15  Score=94.75  Aligned_cols=91  Identities=14%  Similarity=-0.005  Sum_probs=75.9

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+.     .++..||+|.+... ........+.+|+.+++.++||||+.+.+.+...+.+
T Consensus        48 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  125 (343)
T 1luf_A           48 NIEYVRDIGEGAFG-RVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM  125 (343)
T ss_dssp             GCEEEEEEEECSSC-EEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HCeeeeeeeecCCe-eEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence            44677899999999 99999875     34578999998643 2233456789999999999999999999988888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+++++|.+++..
T Consensus       126 ~lv~e~~~~~~L~~~l~~  143 (343)
T 1luf_A          126 CLLFEYMAYGDLNEFLRS  143 (343)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHHH
Confidence            999999999999998865

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.58  E-value=6.7e-15  Score=93.65  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=74.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||.+.+..+++.+|+|.+....  ......+.+|+.++..++||||+.+.+.+...+..|++||
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A           10 TFIFMEVLGSGAFS-EVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceeeeeccCCCCc-eEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            45777899999999 99999998899999999986322  1223567899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        87 ~~~~~~L~~~l~~   99 (304)
T 2jam_A           87 LVSGGELFDRILE   99 (304)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             cCCCccHHHHHHH
Confidence            9999999888754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.58  E-value=5.6e-15  Score=95.16  Aligned_cols=92  Identities=16%  Similarity=0.053  Sum_probs=70.7

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+.   .+++.+|+|.+.....  .......+.+|+.+++.++||||+.+.+.+...+.+
T Consensus        18 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           18 CFELLRVLGKGGYG-KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HeEEEEEEEeCCCE-EEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            56788899999999 99998864   5788999999864321  112335577899999999999999998888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |+||||+++++|.+.+..
T Consensus        97 ~lv~e~~~~~~L~~~l~~  114 (327)
T 3a62_A           97 YLILEYLSGGELFMQLER  114 (327)
T ss_dssp             EEEEECCTTEEHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHh
Confidence            999999999999988764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.58  E-value=4.8e-15  Score=96.32  Aligned_cols=91  Identities=15%  Similarity=0.010  Sum_probs=78.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+... ......+.+.+|+.++..++||||+.+.+.+...+..|++||
T Consensus        34 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           34 DFEKISELGAGNGG-VVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cceeeeeecCCCCe-EEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            45677899999999 9999999999999999998643 233445678899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       112 ~~~~~~L~~~l~~  124 (360)
T 3eqc_A          112 HMDGGSLDQVLKK  124 (360)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999888764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.58  E-value=6.4e-15  Score=94.46  Aligned_cols=90  Identities=14%  Similarity=0.066  Sum_probs=64.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... .......+.+|+.+++.++||||+.+.+.+...+.+|+|||
T Consensus         6 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            6 QFKQLEKLGNGTYA-TVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             -------------C-EEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ceeEeeEECCCCCE-EEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            45677899999999 99999999899999999985432 22234567889999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++ +|.+.+..
T Consensus        84 ~~~~-~L~~~l~~   95 (317)
T 2pmi_A           84 FMDN-DLKKYMDS   95 (317)
T ss_dssp             CCCC-BHHHHHHH
T ss_pred             ecCC-CHHHHHHh
Confidence            9995 78777654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.58  E-value=2.3e-15  Score=97.84  Aligned_cols=92  Identities=14%  Similarity=0.045  Sum_probs=76.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... ..........|..++..+ +||||+.+...+...+.+|+|
T Consensus        18 ~y~~~~~lG~G~fg-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv   96 (345)
T 1xjd_A           18 DFILHKMLGKGSFG-KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   96 (345)
T ss_dssp             TEEEEEEEEECSSS-EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             HeEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence            55778899999999 999999999999999999864311 112245577888888876 899999999888888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+.+..
T Consensus        97 ~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQS  111 (345)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHH
Confidence            999999999988864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.58  E-value=1.5e-14  Score=91.71  Aligned_cols=93  Identities=13%  Similarity=0.038  Sum_probs=73.5

Q ss_pred             hhhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC--Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT--RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~   88 (112)
                      .+.+.+.||+|+|| .||++.    +..+++.||+|.+.... .....+.+.+|+.++..++||||+.+.+.+...  +.
T Consensus        22 ~~~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           22 FLKRIRDLGEGHFG-KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhccCCCCce-EEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            34777899999999 999998    56788899999986432 223346788999999999999999888876553  66


Q ss_pred             eEEEEeccCCcchhhhhhhcC
Q psy16893         89 MYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      ++++|||+++++|.+.+....
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~  120 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNK  120 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHT
T ss_pred             EEEEEEeCCCCcHHHHHHhcc
Confidence            899999999999999885543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.58  E-value=1.8e-14  Score=92.87  Aligned_cols=92  Identities=13%  Similarity=0.073  Sum_probs=74.5

Q ss_pred             hhhcccccccCCcceEEEEEEcC-------CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-------RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-------~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++.+.       .++..||+|.+... ........+.+|+.+++.+ +||||+.+.+.+...
T Consensus        36 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           36 KLTLGKPLGEGAFG-QVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HeEEeeEEeecCce-eEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            44677899999999 99999864       45678999998633 2334456788999999999 799999999888888


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+|+||||+++++|.+++...
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~  135 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRAR  135 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTT
T ss_pred             CceEEEEECCCCCcHHHHHHHh
Confidence            8899999999999999988654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.58  E-value=1.2e-14  Score=93.44  Aligned_cols=92  Identities=16%  Similarity=0.114  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEE-----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT-----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~-----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.     +..++..||+|.+... ........+.+|+.+++.++||||+.+.+.+......
T Consensus        31 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           31 NITLIRGLGHGAFG-EVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GCEEEEECC--CSS-CEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             heEEEEEEcCCCCe-eEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            45777899999999 999998     4567788999998532 2334456788999999999999999999988888889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |++|||+++++|.+++...
T Consensus       109 ~lv~e~~~~~~L~~~l~~~  127 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRET  127 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHT
T ss_pred             EEEEecCCCCcHHHHHHhh
Confidence            9999999999999988653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.58  E-value=2.5e-14  Score=91.71  Aligned_cols=90  Identities=17%  Similarity=0.010  Sum_probs=75.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++... ++..||+|.+...  .....+.+.+|+.+++.++||||+.+.+.+...+..+++||
T Consensus        40 ~y~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  115 (321)
T 2qkw_B           40 NFDHKFLIGHGVFG-KVYKGVLR-DGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK  115 (321)
T ss_dssp             CCSCCCCSCBCSSS-EEEEEECT-TCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred             ccCccceeecCCCe-eEEEEEEC-CCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence            45677789999999 99999864 6888999988543  22345678899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus       116 ~~~~~~L~~~l~~~  129 (321)
T 2qkw_B          116 YMENGNLKRHLYGS  129 (321)
T ss_dssp             CCTTCBTGGGSSSS
T ss_pred             cCCCCcHHHHHhcc
Confidence            99999999888643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.58  E-value=4.8e-15  Score=96.19  Aligned_cols=87  Identities=15%  Similarity=0.193  Sum_probs=72.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+.....      ...+|+.++.++ +||||+.+.+.+.+.+.+|+||
T Consensus        23 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           23 GYEVKEDIGVGSYS-VCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             cEEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            45677899999999 999999999999999999854321      124577777777 6999999999888888999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+.+++|++++...
T Consensus        96 E~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ  110 (342)
T ss_dssp             CCCCSCBHHHHHHTC
T ss_pred             eCCCCCcHHHHHHHc
Confidence            999999999988643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.57  E-value=1e-14  Score=93.78  Aligned_cols=88  Identities=16%  Similarity=0.111  Sum_probs=74.1

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEecc
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      ...+.||+|+|| .||++.+..+++.||+|.+....  ....+.+.+|+.+++.++||||+.+.+.+...+..+++|||+
T Consensus        48 ~~~~~lg~G~~g-~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  124 (321)
T 2c30_A           48 DSYVKIGEGSTG-IVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL  124 (321)
T ss_dssp             EEEEEEEEETTE-EEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hccEEeccCCCe-EEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence            344579999999 99999988889999999985322  223466889999999999999999988888888899999999


Q ss_pred             CCcchhhhhhh
Q psy16893         97 LGEVHVRRWTK  107 (112)
Q Consensus        97 ~~~~l~~~~~~  107 (112)
                      ++++|.+.+..
T Consensus       125 ~~~~L~~~l~~  135 (321)
T 2c30_A          125 QGGALTDIVSQ  135 (321)
T ss_dssp             CSCBHHHHHTT
T ss_pred             CCCCHHHHHHh
Confidence            99999887753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.57  E-value=5.6e-15  Score=101.57  Aligned_cols=92  Identities=17%  Similarity=-0.040  Sum_probs=76.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.++..++||||+.+...+...+.+|+||
T Consensus       185 ~f~~~~~LG~G~fG-~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  263 (576)
T 2acx_A          185 TFRQYRVLGKGGFG-EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL  263 (576)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence            45677899999999 999999999999999999853211 1122355788999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||++||+|.+.+..
T Consensus       264 Ey~~gg~L~~~l~~  277 (576)
T 2acx_A          264 TLMNGGDLKFHIYH  277 (576)
T ss_dssp             CCCCSCBHHHHHHS
T ss_pred             EcCCCCcHHHHHHh
Confidence            99999999988864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=1e-14  Score=95.38  Aligned_cols=91  Identities=27%  Similarity=0.281  Sum_probs=68.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~   88 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...      ..
T Consensus        26 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           26 VYRDLQPVGSGAYG-AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SEEEEEEC-------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             eEEEeEEeeecCCe-EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            35677899999999 999999999999999999965544444567789999999999999999877765543      45


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+ +++|.+.+..
T Consensus       105 ~~lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHH
T ss_pred             EEEEEecC-CCCHHHHHhc
Confidence            69999999 6778777654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.57  E-value=8.1e-15  Score=97.35  Aligned_cols=92  Identities=15%  Similarity=0.120  Sum_probs=72.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC------hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS------LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+......      ......+.+|+.+++.++||||+.+.+.+.. +.
T Consensus       136 ~y~~~~~LG~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~  213 (419)
T 3i6u_A          136 EYIMSKTLGSGACG-EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED  213 (419)
T ss_dssp             TEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred             cEEEEeEEeeCCCe-EEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence            34677889999999 9999999999999999998643211      1112347889999999999999988887654 45


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .|+||||+++++|.+++...
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~  233 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGN  233 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSS
T ss_pred             eEEEEEcCCCCcHHHHHhcc
Confidence            89999999999999988643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.57  E-value=1.1e-14  Score=94.03  Aligned_cols=92  Identities=11%  Similarity=0.015  Sum_probs=78.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .....+.+.+|+.+++.++|+||+.+.+.+...+.+|++|
T Consensus        42 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           42 RYVRGRFLGKGGFA-KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            34677899999999 999999999999999999864322 2334567889999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+++|.+.+..
T Consensus       121 e~~~~~~L~~~~~~  134 (335)
T 2owb_A          121 ELCRRRSLLELHKR  134 (335)
T ss_dssp             CCCTTCBHHHHHHH
T ss_pred             ecCCCCCHHHHHhc
Confidence            99999999887754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.57  E-value=1.3e-14  Score=91.94  Aligned_cols=92  Identities=11%  Similarity=0.015  Sum_probs=78.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+..... .......+.+|+.+++.+.|+||+.+.+.+...+..+++|
T Consensus        16 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           16 RYVRGRFLGKGGFA-KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEeecCCE-EEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            45677899999999 999999998999999999864322 2334567889999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        95 e~~~~~~L~~~~~~  108 (294)
T 2rku_A           95 ELCRRRSLLELHKR  108 (294)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999887754

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.57  E-value=5.6e-15  Score=93.77  Aligned_cols=91  Identities=21%  Similarity=0.132  Sum_probs=70.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC------------------------hhhHHHHHHHHHHHhh
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS------------------------LVSSKRVFRELKMLCF   70 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~------------------------~~~~~~~~~e~~~l~~   70 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+......                        ....+.+.+|+.+++.
T Consensus        14 ~y~~~~~lG~G~~g-~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           14 QYTLKDEIGKGSYG-VVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TEEEEEEEEC--CC-EEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             ceEEEeEEeecCCE-EEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            55778899999999 9999999889999999998533110                        0112457899999999


Q ss_pred             CCCCCeEeeeccCCC--CCceEEEEeccCCcchhhhhh
Q psy16893         71 FKHDNVSITQHTPYT--TRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        71 l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~  106 (112)
                      ++||||+.+.+.+..  ...+|++|||+++++|.+.+.
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT  130 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh
Confidence            999999988887654  567899999999998877543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.57  E-value=8.3e-15  Score=100.21  Aligned_cols=92  Identities=15%  Similarity=-0.035  Sum_probs=76.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...... ....+.+.+|+.++..++||||+.+...+.....+|+||
T Consensus       186 ~f~~~~~LG~G~fG-~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          186 WFLDFRVLGRGGFG-EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCe-EEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            44666789999999 9999999989999999998543211 122356788999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||++|++|.+++..
T Consensus       265 E~~~gg~L~~~l~~  278 (543)
T 3c4z_A          265 TIMNGGDIRYHIYN  278 (543)
T ss_dssp             CCCTTCBHHHHHHT
T ss_pred             EeccCCCHHHHHHH
Confidence            99999999988754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.56  E-value=1.1e-14  Score=93.74  Aligned_cols=90  Identities=16%  Similarity=0.102  Sum_probs=76.2

Q ss_pred             hcc-cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         17 MMH-DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        17 ~~~-~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+. +.||+|+|| .||++.+..+++.||+|.+............+.+|+.++..+. ||||+.+.+.+...+.+|+|||
T Consensus        31 ~~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e  109 (327)
T 3lm5_A           31 ILTSKELGRGKFA-VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE  109 (327)
T ss_dssp             EEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eeccceeCCCCCe-EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence            444 789999999 9999999999999999998654333344567889999999986 6999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+++|.+.+..
T Consensus       110 ~~~~~~L~~~~~~  122 (327)
T 3lm5_A          110 YAAGGEIFSLCLP  122 (327)
T ss_dssp             CCTTEEGGGGGSS
T ss_pred             ecCCCcHHHHHHH
Confidence            9999999988754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.56  E-value=1.5e-15  Score=96.27  Aligned_cols=91  Identities=13%  Similarity=0.124  Sum_probs=61.0

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ..+.+.+.||+|+|| .||++.+..+++.||+|.+.... .......+.+|+.++..++||||+.+.+.+...+..+++|
T Consensus        15 ~~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           15 DDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCEEEEECC---CC-CEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             hhhhhhheeccccce-EEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            356788899999999 99999988889999999885332 1223456788999999999999999988888878899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+++++|.+.+.
T Consensus        93 e~~~~~~L~~~l~  105 (303)
T 2vwi_A           93 KLLSGGSVLDIIK  105 (303)
T ss_dssp             ECCTTCBHHHHHH
T ss_pred             hhccCCchHHHHH
Confidence            9999999988775

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.56  E-value=1.9e-14  Score=91.68  Aligned_cols=91  Identities=19%  Similarity=0.097  Sum_probs=75.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+.... ........+.+|+.+++.++|+||+.+.+.+...+..+++|
T Consensus        33 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           33 NFRIEKKIGRGQFS-EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GEEEEEEEECC--C-EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEeecCCCCc-eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            45677899999999 99999988889999999986422 22334567889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+.+++|.+.+.
T Consensus       112 e~~~~~~L~~~l~  124 (310)
T 2wqm_A          112 ELADAGDLSRMIK  124 (310)
T ss_dssp             ECCCSCBHHHHHH
T ss_pred             ecCCCCCHHHHHH
Confidence            9999999988775

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.56  E-value=2e-14  Score=96.27  Aligned_cols=95  Identities=14%  Similarity=0.107  Sum_probs=75.7

Q ss_pred             CCCCccch---hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC
Q psy16893          7 FSRPSDEI---GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP   83 (112)
Q Consensus         7 ~~~~~~~~---~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (112)
                      +..+.+++   .+.+.+.||+|+|| .||++... .+..||+|.+....   ...+.+.+|+.+++.++||||+.+.+.+
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg-~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~  252 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFG-EVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVV  252 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSE-EEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccccceeechHHeEEEEEcccCCce-EEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence            34444554   33677899999999 99999875 45679999986322   2356789999999999999999888876


Q ss_pred             CCCCceEEEEeccCCcchhhhhhh
Q psy16893         84 YTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        84 ~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      . .+.+|+||||+.+|+|.+++..
T Consensus       253 ~-~~~~~lv~e~~~~g~L~~~l~~  275 (454)
T 1qcf_A          253 T-KEPIYIITEFMAKGSLLDFLKS  275 (454)
T ss_dssp             C-SSSCEEEECCCTTCBHHHHHHS
T ss_pred             e-CCccEEEEeecCCCcHHHHHHh
Confidence            5 4568999999999999998864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.56  E-value=1.8e-14  Score=93.38  Aligned_cols=95  Identities=19%  Similarity=0.134  Sum_probs=74.3

Q ss_pred             ccchhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----
Q psy16893         11 SDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----   85 (112)
Q Consensus        11 ~~~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----   85 (112)
                      .....|.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+..     
T Consensus        14 ~~~~~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFG-EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             CBGGGEEEEEECSSCSTT-SEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccccceeEEEEEecCCCc-EEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            344566888899999999 99999999999999999986443333334567889999999999999987775543     


Q ss_pred             ---CCceEEEEeccCCcchhhhhhh
Q psy16893         86 ---TRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        86 ---~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                         .+.+|+||||+.+ ++.+.+..
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~  116 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSN  116 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHC
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhh
Confidence               4568999999986 56666654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=2.3e-14  Score=92.46  Aligned_cols=91  Identities=12%  Similarity=-0.011  Sum_probs=73.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCC----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      +.+.+.||+|+|| .||++....++    ..||+|.+... ........+.+|+.++..++||||+.+.+.+...+..++
T Consensus        46 ~~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           46 VTRQKVIGAGEFG-EVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             EEEEEEEEECSSS-EEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             hhcccEEecCCCe-EEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            3566789999999 99999765443    35999998633 233345678899999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ||||+++++|.+.+...
T Consensus       124 v~e~~~~~~L~~~l~~~  140 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK  140 (333)
T ss_dssp             EEECCTTEEHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHHhC
Confidence            99999999999988654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.56  E-value=7.4e-15  Score=92.40  Aligned_cols=92  Identities=16%  Similarity=0.068  Sum_probs=77.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+...... ......+.+|+.+++.++||||+.+.+.+...+..+++|
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (279)
T 3fdn_A           10 DFEIGRPLGKGKFG-NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   88 (279)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cEEEeeEEecCCCe-EEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence            56778899999999 9999999999999999998532111 112356788999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        89 e~~~~~~l~~~l~~  102 (279)
T 3fdn_A           89 EYAPLGTVYRELQK  102 (279)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             ecCCCCcHHHHHHh
Confidence            99999999888754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.56  E-value=1.8e-14  Score=91.07  Aligned_cols=87  Identities=16%  Similarity=0.056  Sum_probs=73.4

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCCc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      ..||+|+|| .||++.+..++..||+|.+...  .....+.+.+|+.+++.++||||+.+.+.+...+..+++|||++++
T Consensus        28 ~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           28 VVLGKGTYG-IVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             CEEEECSSS-EEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEeecCcE-EEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            479999999 9999999889999999998532  2233567889999999999999999988888888899999999999


Q ss_pred             chhhhhhhcC
Q psy16893        100 VHVRRWTKDQ  109 (112)
Q Consensus       100 ~l~~~~~~~~  109 (112)
                      +|.+.+....
T Consensus       105 ~L~~~l~~~~  114 (295)
T 2clq_A          105 SLSALLRSKW  114 (295)
T ss_dssp             EHHHHHHHTT
T ss_pred             CHHHHHHhhc
Confidence            9998886543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.56  E-value=1.3e-14  Score=91.98  Aligned_cols=90  Identities=13%  Similarity=0.066  Sum_probs=74.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..++..+|+|.+...  .....+.+.+|+.++..++||||+.+.+.+...+..+++||
T Consensus        20 ~y~i~~~lg~G~~g-~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           20 VWEIVGELGDGAFG-KVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             TEEEEEEEECSTTC-CEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             ceeecceeccCCCe-EEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            44677899999999 9999999989999999998532  22335678899999999999999999888888788999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        97 ~~~~~~l~~~~~~  109 (302)
T 2j7t_A           97 FCPGGAVDAIMLE  109 (302)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             eCCCCcHHHHHHh
Confidence            9999998877654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.56  E-value=1.7e-14  Score=91.84  Aligned_cols=92  Identities=15%  Similarity=0.069  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++..     ..++..||+|.+... ......+.+.+|+.++..+ +||||+.+.+.+...+.
T Consensus        24 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           24 RLSFGKTLGAGAFG-KVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhHHHhhCccCCc-ceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            44677899999999 9999973     456778999998633 2233457788999999999 89999999998888888


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .+++|||+++++|.+.+...
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHT
T ss_pred             cEEEEecCCCCCHHHHHHhc
Confidence            99999999999999988654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.55  E-value=1.9e-14  Score=92.13  Aligned_cols=91  Identities=15%  Similarity=0.041  Sum_probs=75.1

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+.     .++..||+|.+... ........+.+|+.+++.++|+||+.+.+.+...+..
T Consensus        26 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           26 KITMSRELGQGSFG-MVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             heeeeeEeccCCce-EEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            44677899999999 99998764     35678999998632 2233456688999999999999999999888888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++++|.+.+..
T Consensus       104 ~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHH
Confidence            999999999999988764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.55  E-value=2.1e-14  Score=94.32  Aligned_cols=91  Identities=22%  Similarity=0.219  Sum_probs=67.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCC--CCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYT--TRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~l   91 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+...+|+.++..+. ||||+.+.+.+..  ...+|+
T Consensus        10 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A           10 KYELVKKLGKGAYG-IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TEEEEEC--------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             ceEEEEEeeeCCCe-EEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            45677899999999 9999999999999999998655445556678889999999998 9999988887643  447899


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ||||+++ +|.+.++.
T Consensus        89 v~e~~~~-~L~~~~~~  103 (388)
T 3oz6_A           89 VFDYMET-DLHAVIRA  103 (388)
T ss_dssp             EEECCSE-EHHHHHHH
T ss_pred             EecccCc-CHHHHHHc
Confidence            9999985 67777654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.55  E-value=1.1e-14  Score=91.82  Aligned_cols=91  Identities=12%  Similarity=0.051  Sum_probs=76.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-------CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-------RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-------~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (112)
                      .+.+.+.||+|+|| .||++.+..++       ..+|+|.+...  .....+.+.+|+.+++.++||||+.+.+.+...+
T Consensus         9 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            9 DLIFNESLGQGTFT-KIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             HeeeeeeeccCCCc-eEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            45677899999999 99999877666       46999988532  2234567889999999999999999999888888


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ..+++|||+.+++|.+.+...
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~  106 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKN  106 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHT
T ss_pred             CCEEEEECCCCCCHHHHHHhC
Confidence            889999999999999988654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.55  E-value=7.6e-15  Score=96.33  Aligned_cols=92  Identities=16%  Similarity=0.044  Sum_probs=68.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-hhhHHHHHHHHHH-HhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-LVSSKRVFRELKM-LCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.+|+|.+...... ......+..|..+ ++.++||||+.+...+...+.+|+|
T Consensus        39 ~y~~~~~lG~G~fg-~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           39 DFHFLKVIGKGSFG-KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GEEEEEEEECCTTC-EEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             heEEEEEEeeCCCe-EEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            45778899999999 9999999999999999999643221 2223455667665 5678899999998888888899999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+.+..
T Consensus       118 ~E~~~gg~L~~~l~~  132 (373)
T 2r5t_A          118 LDYINGGELFYHLQR  132 (373)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHh
Confidence            999999999988864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.55  E-value=2.4e-14  Score=90.97  Aligned_cols=90  Identities=13%  Similarity=0.038  Sum_probs=76.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+.... .....+.+.+|+.++..+.|||++.+.+.+......|++|||
T Consensus        24 y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           24 FTKLEKIGKGSFG-EVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             EEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHhhhhcccCCe-EEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            4677889999999 99999988899999999985332 223456788999999999999999998888777889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+.+..
T Consensus       102 ~~~~~L~~~~~~  113 (303)
T 3a7i_A          102 LGGGSALDLLEP  113 (303)
T ss_dssp             CTTEEHHHHHTT
T ss_pred             CCCCcHHHHHhc
Confidence            999999888754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.55  E-value=2e-14  Score=90.52  Aligned_cols=88  Identities=14%  Similarity=0.057  Sum_probs=71.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++... ++..||+|.+....   ...+.+.+|+.++..++|+||+.+.+.+...+..+++||
T Consensus        25 ~y~~~~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           25 DLTFLKELGTGQFG-VVKYGKWR-GQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             GEEEEEECC---CE-EEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             HHHhHhhcCCCCCc-eEEEEEEc-CCCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            45677899999999 99999765 56679999986432   223568899999999999999999998888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       100 ~~~~~~L~~~l~~  112 (283)
T 3gen_A          100 YMANGCLLNYLRE  112 (283)
T ss_dssp             CCTTCBHHHHHHC
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999998865

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.55  E-value=1.6e-15  Score=101.32  Aligned_cols=92  Identities=15%  Similarity=0.064  Sum_probs=69.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... ........+.+|+.++..++||||+.+.+.+...+.+|+||
T Consensus       149 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          149 EFEYLKLLGKGTFG-KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HcEEeEEEeeCcCE-EEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            45677899999999 99999999999999999986432 12223456778999999999999999998888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus       228 e~~~~~~L~~~l~~  241 (446)
T 4ejn_A          228 EYANGGELFFHLSR  241 (446)
T ss_dssp             CCCSSCBHHHHHHH
T ss_pred             eeCCCCcHHHHHHh
Confidence            99999999888754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.55  E-value=2e-14  Score=89.85  Aligned_cols=90  Identities=13%  Similarity=0.023  Sum_probs=74.8

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ..+.+.+.||+|+|| .||++... ++..+|+|.+....   .....+.+|+.++..++||||+.+.+.+...+..+++|
T Consensus         8 ~~y~~~~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A            8 EEITLLKELGSGQFG-VVKLGKWK-GQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             GGEEEEEEEEEETTE-EEEEEEET-TTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hheeeeeeeccCCCc-eEEEEEec-CceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence            355777899999999 99999765 56679999986432   23356889999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++++|.+.+...
T Consensus        83 e~~~~~~L~~~l~~~   97 (268)
T 3sxs_A           83 EYISNGCLLNYLRSH   97 (268)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             EccCCCcHHHHHHHc
Confidence            999999999888653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.55  E-value=4.2e-14  Score=90.83  Aligned_cols=92  Identities=20%  Similarity=0.174  Sum_probs=74.3

Q ss_pred             hhhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~   88 (112)
                      .+.+.+.||+|+|| .||++.    +..+++.||+|.+...  .....+.+.+|+.+++.++||||+.+.+.+..  ...
T Consensus        42 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           42 HLKFLQQLGKGNFG-SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GEEEEEEEECCSSE-EEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             HceeeeeeccCCCe-EEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            45678899999999 999997    4567889999998642  23445678999999999999999988776554  346


Q ss_pred             eEEEEeccCCcchhhhhhhcC
Q psy16893         89 MYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      ++++|||+++++|.+.+....
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~  139 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHK  139 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHST
T ss_pred             eEEEEECCCCCCHHHHHHhcc
Confidence            899999999999999887643

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.55  E-value=2.2e-14  Score=90.75  Aligned_cols=92  Identities=12%  Similarity=0.019  Sum_probs=71.5

Q ss_pred             hhhccc-ccccCCcceEEEEE--EcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHD-EVGLLSICSSVKAV--TDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~-~lg~g~~g~~v~~~--~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+ .||+|+|| .||++  ....++..+|+|.+..........+.+.+|+.+++.++||||+.+.+.+ ..+..++
T Consensus        17 ~y~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           17 LLTLEDKELGSGNFG-TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GEEEEEEEEEECSSE-EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhccCccccccCe-eeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            345555 89999999 99999  4456678899999864433333456789999999999999999888877 4566899


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      +|||+++++|.+++...
T Consensus        95 v~e~~~~~~L~~~l~~~  111 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQN  111 (291)
T ss_dssp             EEECCTTEEHHHHHHHC
T ss_pred             EEEeCCCCCHHHHHHhC
Confidence            99999999999988653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.55  E-value=2.8e-14  Score=89.67  Aligned_cols=97  Identities=13%  Similarity=0.041  Sum_probs=77.4

Q ss_pred             CCCCCCccch---hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893          5 KTFSRPSDEI---GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus         5 ~~~~~~~~~~---~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      ++|..+.+++   .+.+.+.||+|+|| .||++... .+..+|+|.+....   ...+.+.+|+.+++.++||||+.+.+
T Consensus         1 ~~~~~~~~~v~~~~y~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~   75 (279)
T 1qpc_A            1 KPWWEDEWEVPRETLKLVERLGAGQFG-EVWMGYYN-GHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYA   75 (279)
T ss_dssp             CCTTTCTTBCCGGGEEEEEEEEEETTE-EEEEEEET-TTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCcchhhcccCHHhhhheeeecCCCCe-EEEEEEEc-CCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEE
Confidence            4666777776   34778899999999 99999865 55679999985322   23467889999999999999998887


Q ss_pred             cCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         82 TPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        82 ~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+.. +..+++|||+++++|.+.+..
T Consensus        76 ~~~~-~~~~~v~e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           76 VVTQ-EPIYIITEYMENGSLVDFLKT  100 (279)
T ss_dssp             EECS-SSCEEEEECCTTCBHHHHTTS
T ss_pred             EEcC-CCcEEEEecCCCCCHHHHHhc
Confidence            6654 458999999999999988764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.55  E-value=2.4e-14  Score=89.36  Aligned_cols=91  Identities=11%  Similarity=0.025  Sum_probs=75.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||.+.+. ++..+|+|.+....   ...+.+.+|+.++..++||||+.+.+.+...+..+++||
T Consensus         9 ~y~~~~~lg~G~~g-~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            9 ELTFVQEIGSGQFG-LVHLGYWL-NKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEET-TTEEEEEEEECTTT---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             heeeeeEecCCCce-eEEEEEec-CCCeEEEEEccccC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            45677899999999 99999875 56789999986432   223578899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      |+++++|.+.+....+
T Consensus        84 ~~~~~~L~~~~~~~~~   99 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRG   99 (267)
T ss_dssp             CCTTCBHHHHHHHTTT
T ss_pred             CCCCCcHHHHHhhCcc
Confidence            9999999998876543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.54  E-value=1.4e-14  Score=92.93  Aligned_cols=91  Identities=16%  Similarity=0.113  Sum_probs=71.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC------hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS------LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+......      ......+.+|+.+++.++||||+.+.+.+...+ 
T Consensus        11 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           11 EYIMSKTLGSGACG-EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             ceeEeeEEecCCCE-EEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            45777899999999 9999999989999999998643211      111234788999999999999998888765544 


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      .|++|||+++++|.+.+..
T Consensus        89 ~~lv~e~~~~~~L~~~~~~  107 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVG  107 (322)
T ss_dssp             EEEEEECCTTEETHHHHST
T ss_pred             eEEEEecCCCCcHHHHHhc
Confidence            8999999999999988764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=1.6e-14  Score=93.29  Aligned_cols=93  Identities=15%  Similarity=0.076  Sum_probs=73.9

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+     ..++..||+|.+.... .......+.+|+.++..+ .||||+.+.+.+...+.
T Consensus        46 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           46 NLEFGKVLGSGAFG-KVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HceeeeeecCCCCc-eeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            44677899999999 9999985     2355679999986322 223346788999999999 89999999998888888


Q ss_pred             eEEEEeccCCcchhhhhhhcC
Q psy16893         89 MYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~~  109 (112)
                      +|++|||+++++|.+.+....
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTT
T ss_pred             cEEEEecCCCCcHHHHHhhcc
Confidence            999999999999999887543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.54  E-value=2.4e-14  Score=92.00  Aligned_cols=91  Identities=14%  Similarity=0.105  Sum_probs=74.8

Q ss_pred             hhhhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC--CCC
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY--TTR   87 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~   87 (112)
                      ..+.+.+.||+|+|| .||++.    +..++..||+|.+...  .....+.+.+|+.+++.++|+||+.+.+.+.  ...
T Consensus        23 ~~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   99 (327)
T 3lxl_A           23 RHLKYISQLGKGNFG-SVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ   99 (327)
T ss_dssp             GGEEEEEEEEEETTE-EEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred             hhhhhhhhccCCCCe-EEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence            355788899999999 999998    5667889999998532  2344567899999999999999998877553  456


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+|+||||+++++|.+.+..
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~  119 (327)
T 3lxl_A          100 SLRLVMEYLPSGCLRDFLQR  119 (327)
T ss_dssp             EEEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEEeecCCCCHHHHHHh
Confidence            78999999999999988865

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.54  E-value=1.4e-14  Score=97.35  Aligned_cols=89  Identities=24%  Similarity=0.207  Sum_probs=72.6

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~   89 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+..      ...+
T Consensus        64 y~~~~~lG~G~~g-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           64 YQNLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             EEEEEEEEECSSC-EEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             eEEEEEeecCCCe-EEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            4567889999999 99999999999999999997554445556788899999999999999988776543      3567


Q ss_pred             EEEEeccCCcchhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~  106 (112)
                      |+||||+.++ +.+.+.
T Consensus       143 ~lv~E~~~~~-l~~~~~  158 (464)
T 3ttj_A          143 YLVMELMDAN-LCQVIQ  158 (464)
T ss_dssp             EEEEECCSEE-HHHHHT
T ss_pred             EEEEeCCCCC-HHHHHh
Confidence            9999999875 555543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.54  E-value=1e-14  Score=92.01  Aligned_cols=92  Identities=15%  Similarity=0.095  Sum_probs=76.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||.+.+..++..+|+|.+..... .......+.+|+.+++.++|||++.+.+.+...+..|++|
T Consensus        15 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           15 DFDIGRPLGKGKFG-NVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hceeeheecCCCCe-EEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56778899999999 999999988899999999853211 1112356889999999999999999988888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+.+..
T Consensus        94 e~~~~~~L~~~l~~  107 (284)
T 2vgo_A           94 EFAPRGELYKELQK  107 (284)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             EeCCCCcHHHHHHh
Confidence            99999999888764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.54  E-value=1.8e-14  Score=91.23  Aligned_cols=91  Identities=16%  Similarity=0.103  Sum_probs=72.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||.+.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+...+..|++||
T Consensus         4 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            4 NFQKVEKIGEGTYG-VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhhhhhhccCCCe-eEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            35667899999999 99999998899999999986433222234667899999999999999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.+ +|.+.+..
T Consensus        83 ~~~~-~L~~~~~~   94 (299)
T 2r3i_A           83 FLHQ-DLKKFMDA   94 (299)
T ss_dssp             CCSE-EHHHHHHH
T ss_pred             cccC-CHHHHHHh
Confidence            9984 78887754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.54  E-value=3.1e-14  Score=91.51  Aligned_cols=91  Identities=14%  Similarity=0.086  Sum_probs=75.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC-----eEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR-----RVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~-----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++.     .||+|.+... ......+.+.+|+.++..+ +||||+.+.+.+...+.
T Consensus        47 ~~~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           47 NLQFGKTLGAGAFG-KVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             SEEEEEEEEECSSE-EEEEEEETTCSSSCCCCEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HceeeeEeccCCCc-ceEEEEecCCCcccchhHHHHHhcccc-cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            34677899999999 999998765553     6999998533 2334456788999999999 79999999998888888


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|+||||+++++|.+.+..
T Consensus       125 ~~lv~e~~~~g~L~~~l~~  143 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRR  143 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHH
T ss_pred             eEEEEecCCCCcHHHHHHH
Confidence            9999999999999988864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.54  E-value=1.6e-14  Score=92.20  Aligned_cols=88  Identities=13%  Similarity=0.074  Sum_probs=71.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+....    ..+.+.+|+.++..++||||+.+.+.+...+..|++||
T Consensus        30 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           30 VFDVLEKLGEGSYG-SVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             CEEEEEECC----C-EEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhhheeeccCCCe-EEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            34567889999999 99999998899999999985321    23567889999999999999999888877888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus       105 ~~~~~~L~~~~~~  117 (314)
T 3com_A          105 YCGAGSVSDIIRL  117 (314)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             cCCCCCHHHHHHh
Confidence            9999999888763

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.54  E-value=6.2e-14  Score=88.30  Aligned_cols=92  Identities=12%  Similarity=-0.021  Sum_probs=73.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..+   +..+|+|.+... ......+.+.+|+.+++.++||||+.+.+.+.. +..|+
T Consensus        16 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~l   92 (281)
T 1mp8_A           16 RIELGRCIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI   92 (281)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEE
T ss_pred             HeEEEeEeeecCCe-eEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-CccEE
Confidence            55788899999999 9999987543   456999988532 223345678899999999999999988887644 56899


Q ss_pred             EEeccCCcchhhhhhhcC
Q psy16893         92 GLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~  109 (112)
                      +|||+++++|.+.+....
T Consensus        93 v~e~~~~~~L~~~l~~~~  110 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRK  110 (281)
T ss_dssp             EEECCTTEEHHHHHHHTT
T ss_pred             EEecCCCCCHHHHHHhcC
Confidence            999999999999886543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.54  E-value=2.7e-14  Score=99.24  Aligned_cols=87  Identities=11%  Similarity=-0.001  Sum_probs=71.3

Q ss_pred             cccccCCcceEEEEEE--cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccC
Q psy16893         20 DEVGLLSICSSVKAVT--DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~--~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      +.||+|+|| .||++.  ...++..||+|.+..........+.+.+|+.++..++||||+.+.+++.. +.+++||||++
T Consensus       375 ~~LG~G~fG-~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFG-TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSE-EEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CEeccCCCE-EEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            369999999 999984  44567789999986544444445789999999999999999999887754 45899999999


Q ss_pred             Ccchhhhhhhc
Q psy16893         98 GEVHVRRWTKD  108 (112)
Q Consensus        98 ~~~l~~~~~~~  108 (112)
                      +++|.+++...
T Consensus       453 ~g~L~~~l~~~  463 (635)
T 4fl3_A          453 LGPLNKYLQQN  463 (635)
T ss_dssp             TEEHHHHHHHC
T ss_pred             CCCHHHHHhhC
Confidence            99999988653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.54  E-value=3.2e-14  Score=93.31  Aligned_cols=92  Identities=13%  Similarity=0.055  Sum_probs=75.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++.+..       .+..||+|.+... ........+.+|+.++..+ +||||+.+.+.+...
T Consensus        70 ~y~i~~~LG~G~~g-~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           70 RLVLGKPLGEGAFG-QVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             heEeeeEEecCCCe-EEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            34677899999999 999998532       3356999998643 2334457788999999999 899999999988888


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+++||||+++++|.+++...
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~  169 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQAR  169 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT
T ss_pred             CceEEEEEecCCCcHHHHHHHh
Confidence            8899999999999999988754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.54  E-value=1.9e-14  Score=92.21  Aligned_cols=92  Identities=15%  Similarity=0.054  Sum_probs=66.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce--
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM--   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--   89 (112)
                      .+.+.+.||+|+|| .||++.+..++.   .||+|.+..........+.+.+|+.+++.++||||+.+.+.+......  
T Consensus        24 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           24 QFTLGRMLGKGEFG-SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             -CEEEEEEEEETTE-EEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             HeEEeceecccCCe-EEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            45677899999999 999998876654   799999865433344567789999999999999999887766554333  


Q ss_pred             ----EEEEeccCCcchhhhhhh
Q psy16893         90 ----YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ----~lv~e~~~~~~l~~~~~~  107 (112)
                          +++|||+.+++|.+.+..
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~  124 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLA  124 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHH
T ss_pred             CCccEEEEEeccCCcHHHHHHh
Confidence                999999999999888754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.53  E-value=6.3e-15  Score=96.08  Aligned_cols=92  Identities=14%  Similarity=-0.013  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+..|..++..+ .||||+.+...+...+.+|+|
T Consensus        21 ~y~~~~~lG~G~fg-~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   99 (353)
T 2i0e_A           21 DFNFLMVLGKGSFG-KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   99 (353)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred             HcEEEEEEeeCCCE-EEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence            45777899999999 999999988899999999864311 112345677899999887 699999999888888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+.+..
T Consensus       100 ~E~~~gg~L~~~l~~  114 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQ  114 (353)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHh
Confidence            999999999988864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.53  E-value=1.7e-14  Score=91.29  Aligned_cols=89  Identities=12%  Similarity=0.065  Sum_probs=73.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC----------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY----------   84 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------   84 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..   .....+.+.+|+.+++.++|||++.+.+.+.          
T Consensus         7 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            7 DFEEIAVLGQGAFG-QVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             cchhhheeccCCcE-EEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            45677899999999 999999988999999999853   2234567889999999999999997765432          


Q ss_pred             ---CCCceEEEEeccCCcchhhhhhh
Q psy16893         85 ---TTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        85 ---~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                         .....|++|||+++++|.+.+..
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~  108 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHS  108 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHH
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhc
Confidence               24668999999999999998864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.53  E-value=3.2e-14  Score=90.98  Aligned_cols=92  Identities=16%  Similarity=0.025  Sum_probs=71.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...............|+..+..+ .|+||+.+.+.+...+.+|++|
T Consensus        58 ~y~~~~~LG~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           58 SFQRLSRLGHGSYG-EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HEEEEEEEEEETTE-EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             heeeeheeccCCCe-EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            34667789999999 999999998999999998864433334444555666655544 7999999999888888899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+. ++|.+.+...
T Consensus       137 e~~~-~~L~~~~~~~  150 (311)
T 3p1a_A          137 ELCG-PSLQQHCEAW  150 (311)
T ss_dssp             ECCC-CBHHHHHHHH
T ss_pred             eccC-CCHHHHHHhc
Confidence            9995 5777776543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.53  E-value=4.8e-14  Score=92.17  Aligned_cols=90  Identities=23%  Similarity=0.182  Sum_probs=73.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...      ..
T Consensus        26 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           26 RYQNLKPIGSGAQG-IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             heeEeeeeEecCCE-EEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            45677899999999 999999988999999999865444444557788999999999999999887765543      37


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      +|+||||+.+ +|.+.+.
T Consensus       105 ~~lv~e~~~~-~l~~~~~  121 (371)
T 2xrw_A          105 VYIVMELMDA-NLCQVIQ  121 (371)
T ss_dssp             EEEEEECCSE-EHHHHHH
T ss_pred             eEEEEEcCCC-CHHHHHh
Confidence            8999999986 5666654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.52  E-value=3.5e-14  Score=90.70  Aligned_cols=90  Identities=17%  Similarity=0.127  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC----CCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY----TTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..  ......+.+.+|+.+++.++||||+.+.+.+.    .....|
T Consensus        30 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           30 HYLFIQKLGEGGFS-YVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEEEEEC--CE-EEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             EEEEEEEecCCCCe-EEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            35677899999999 999999988999999998853  23344567889999999999999998877654    345789


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      ++|||+.+++|.+.+..
T Consensus       107 lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHH
Confidence            99999999999887754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.52  E-value=2.5e-14  Score=90.57  Aligned_cols=92  Identities=14%  Similarity=0.033  Sum_probs=76.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC---C----hhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ---S----LVSSKRVFRELKMLCFFK-HDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~---~----~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....   .    ....+.+.+|+.++..+. ||||+.+.+.+...
T Consensus        18 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           18 NYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccceeeeecCCCce-EEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence            45677899999999 999999998999999999853321   1    112356789999999996 99999998888888


Q ss_pred             CceEEEEeccCCcchhhhhhh
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +..+++|||+++++|.+.+..
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~~  117 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLTE  117 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH
T ss_pred             CeEEEEEeccCCCcHHHHHhc
Confidence            889999999999999998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.52  E-value=3.3e-14  Score=95.24  Aligned_cols=86  Identities=14%  Similarity=0.043  Sum_probs=71.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.... +..||+|.+....   ...+.+.+|+.+++.++||||+.+.+.+.. +.+|+||||
T Consensus       186 ~~~~~~lG~G~fg-~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          186 LRLEVKLGQGCFG-EVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             EEEEEEEEECSSC-EEEEEEETT-TEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ceeeeeecCCCCe-EEEEEEECC-CceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            3677889999999 999998764 4569999986432   224678899999999999999998887765 668999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+++|.+++..
T Consensus       260 ~~~gsL~~~l~~  271 (452)
T 1fmk_A          260 MSKGSLLDFLKG  271 (452)
T ss_dssp             CTTCBHHHHHSH
T ss_pred             hcCCCHHHHHHh
Confidence            999999998864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.52  E-value=3.7e-14  Score=94.92  Aligned_cols=86  Identities=14%  Similarity=0.099  Sum_probs=71.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++...  +..||+|.+...    ...+.+.+|+.+++.++||||+.+.+.+.. ...+|+|||
T Consensus       195 ~~~~~~lG~G~fg-~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          195 LKLLQTIGKGEFG-DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             EEEEEEEEECSSE-EEEEEEET--TEEEEEEEESSC----TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             eEEEeeecCcCCe-eEEEEEec--CCeEEEEEeCCc----hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3567899999999 99998875  678999998632    234678899999999999999998887654 447999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++|+|.+++...
T Consensus       268 ~~~~g~L~~~l~~~  281 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR  281 (450)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             ecCCCcHHHHHHhc
Confidence            99999999988754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.52  E-value=8.1e-14  Score=88.31  Aligned_cols=92  Identities=13%  Similarity=-0.025  Sum_probs=71.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-CCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-YTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++....+   ...+|+|.+... ......+.+.+|+.+++.++||||+.+.+.+ ...+..+
T Consensus        26 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           26 IVHFNEVIGRGHFG-CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ehhhcceeeecCCc-eEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            44677899999999 9999985433   335899988532 2334457788999999999999999988864 4466789


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+++++|.+.+...
T Consensus       104 ~v~e~~~~~~L~~~l~~~  121 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNE  121 (298)
T ss_dssp             EEEECCTTCBHHHHHHCT
T ss_pred             EEEeCCCCCCHHHHHHhc
Confidence            999999999999988653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=4.3e-14  Score=91.56  Aligned_cols=93  Identities=16%  Similarity=0.031  Sum_probs=71.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh---hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL---VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      ..+.+.+.||+|+|| .||++.+..+++.||+|.+.......   ...+.+.+|+.+++.++||||+.+.+.+...+..+
T Consensus        10 ~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFA-TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ---CEEEEEEEETTE-EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             cccEEEeEEeecCCE-EEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            356777899999999 99999998899999999986432111   11246788999999999999999998888888899


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+++ ++.+.+...
T Consensus        89 lv~e~~~~-~l~~~~~~~  105 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKDN  105 (346)
T ss_dssp             EEEECCSE-EHHHHHTTC
T ss_pred             EEEEcCCC-CHHHHHHhc
Confidence            99999997 677776554

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.52  E-value=5.2e-14  Score=89.04  Aligned_cols=89  Identities=13%  Similarity=-0.011  Sum_probs=71.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++...   ..+|+|.+..........+.+.+|+.+++.++|+||+.+.++.. ....+++||
T Consensus        25 ~y~~~~~lG~G~~g-~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e   99 (289)
T 3og7_A           25 QITVGQRIGSGSFG-TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ   99 (289)
T ss_dssp             SCEEEEEEEECSSE-EEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ceeeeeEecCCCCe-EEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence            44677899999999 99998764   34999998654444455677899999999999999998877543 455899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+++|.+.+...
T Consensus       100 ~~~~~~L~~~l~~~  113 (289)
T 3og7_A          100 WCEGSSLYHHLHAS  113 (289)
T ss_dssp             CCCEEEHHHHHTTC
T ss_pred             ecCCCcHHHHHhhc
Confidence            99999999888544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.51  E-value=5e-14  Score=92.18  Aligned_cols=91  Identities=32%  Similarity=0.302  Sum_probs=66.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+..      ...
T Consensus        30 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           30 RYQNLSPVGSGAYG-SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TEEEEEECC----C-CEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEeeEEeecCCe-EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            44677899999999 99999999999999999996544444556778899999999999999987775543      356


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|+++|++ +++|.+.+..
T Consensus       109 ~~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             CEEEEECC-CEECC-----
T ss_pred             EEEEeccc-CCCHHHHHhc
Confidence            89999999 5677776653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.51  E-value=2.9e-14  Score=91.46  Aligned_cols=91  Identities=14%  Similarity=0.007  Sum_probs=73.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.. .++..||+|.+..... ......+.+|+.++..++||||+.+.+.+...+..+++||
T Consensus        31 ~y~~~~~lg~G~~g-~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  107 (326)
T 3uim_A           31 NFSNKNILGRGGFG-KVYKGRL-ADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP  107 (326)
T ss_dssp             SSCSTTEEECCSSS-EEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred             ccccceeEecCCCc-EEEEEEe-cCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence            44677899999999 9999874 4678899999864321 1222357889999999999999999998888888899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+++|.+.+...
T Consensus       108 ~~~~~~L~~~l~~~  121 (326)
T 3uim_A          108 YMANGSVASCLRER  121 (326)
T ss_dssp             CCTTCBHHHHHHCC
T ss_pred             eccCCCHHHHHHhc
Confidence            99999999888653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.51  E-value=1e-14  Score=94.27  Aligned_cols=92  Identities=11%  Similarity=-0.048  Sum_probs=74.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh------hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL------VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (112)
                      .|.+.+.||+|+|| .||++.+..++..||+|.+.......      .....+.+|+.+++.++||||+.+.+.+...+.
T Consensus        25 ~y~~~~~lG~G~~g-~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           25 KYSTMSPLGSGAFG-FVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HEEEEEECSSSSSC-SEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             ceEEEeEEEecCCE-EEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            34677899999999 99999999999999999986432111      122356779999999999999999998888888


Q ss_pred             eEEEEeccCCc-chhhhhhh
Q psy16893         89 MYPGLTLRLGE-VHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~-~l~~~~~~  107 (112)
                      ++++|||+.+| +|.+++..
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~  123 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDR  123 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHT
T ss_pred             EEEEEEeCCCCccHHHHHHh
Confidence            99999999777 77777754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=7.9e-14  Score=88.21  Aligned_cols=92  Identities=13%  Similarity=-0.011  Sum_probs=72.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc-eE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR-MY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..++.   .+|+|.+... ......+.+.+|+.+++.++||||+.+.+.+...+. .+
T Consensus        22 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   99 (298)
T 3pls_A           22 VTHSDRVIGKGHFG-VVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH   99 (298)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             EEccCceeccCCCc-eEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence            34456789999999 999998544433   6999988532 233445678899999999999999998887766444 49


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+.+++|.+.+...
T Consensus       100 ~v~e~~~~~~L~~~~~~~  117 (298)
T 3pls_A          100 VLLPYMCHGDLLQFIRSP  117 (298)
T ss_dssp             EEECCCTTCBHHHHHHCT
T ss_pred             EEEecccCCCHHHHHhcc
Confidence            999999999999988653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.51  E-value=4.5e-14  Score=90.50  Aligned_cols=91  Identities=11%  Similarity=-0.005  Sum_probs=72.2

Q ss_pred             hhcccccccCCcceEEEEEE----cCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVT----DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~----~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~   89 (112)
                      +.+.+.||+|+|| .||++.    +..+++.||+|.+... ......+.+.+|+.+++.++||||+.+.+.+..  ...+
T Consensus        33 ~~~~~~lG~G~~g-~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           33 LKKIRDLGEGHFG-KVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             EEEEEEEEECSSE-EEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred             HhhhheecCCCCe-EEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence            3677899999999 997764    3457788999998643 233445678999999999999999988887655  4678


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      +++|||+++++|.+++...
T Consensus       111 ~lv~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGS
T ss_pred             EEEEecccCCcHHHHHhhC
Confidence            9999999999999988653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=1.2e-13  Score=87.24  Aligned_cols=91  Identities=13%  Similarity=0.118  Sum_probs=71.7

Q ss_pred             hhccc-ccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHD-EVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~-~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+ .||+|+|| .||++.+.  .++..||+|.+... ......+.+.+|+.++..++||||+.+.+.+ ..+..+++
T Consensus        11 ~~i~~~~lg~G~~g-~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A           11 LLIADIELGCGNFG-SVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             EEEEEEEEECCTTE-EEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             hhhhhccccccCce-eEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            34444 89999999 99998743  45778999998643 2334457788999999999999999888877 44568999


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      |||+++++|.+.+....
T Consensus        88 ~e~~~~~~L~~~l~~~~  104 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKR  104 (287)
T ss_dssp             EECCTTEEHHHHHTTCT
T ss_pred             EEeCCCCCHHHHHHhCC
Confidence            99999999999886543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.51  E-value=7.6e-14  Score=91.15  Aligned_cols=91  Identities=15%  Similarity=0.060  Sum_probs=74.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC--Ch----hhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ--SL----VSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~--~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+.....  ..    ...+.+.+|+.++..+ .||||+.+.+.+.....
T Consensus        96 y~~~~~lg~G~~g-~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A           96 YDPKDVIGRGVSS-VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             cccceEEecCCCE-EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            3455789999999 999999988899999998853321  11    1135678899999998 79999999888888888


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      .|++|||+++++|.+++..
T Consensus       175 ~~lv~e~~~g~~L~~~l~~  193 (365)
T 2y7j_A          175 MFLVFDLMRKGELFDYLTE  193 (365)
T ss_dssp             EEEEECCCTTCBHHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHHh
Confidence            9999999999999988764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.50  E-value=1.4e-13  Score=87.53  Aligned_cols=87  Identities=14%  Similarity=0.056  Sum_probs=72.0

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEccccc--CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF--QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      ..+.||+|+|| .||++..  .+..+|+|.+....  ......+.+.+|+.+++.++||||+.+.+.+...+..+++|||
T Consensus        35 ~~~~lg~G~~g-~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  111 (307)
T 2nru_A           35 GGNKMGEGGFG-VVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY  111 (307)
T ss_dssp             TCCEEEECSSE-EEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cCCccccCCCe-EEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence            34689999999 9999886  47789999986432  1223356788999999999999999999988888889999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +++++|.+++..
T Consensus       112 ~~~~~L~~~l~~  123 (307)
T 2nru_A          112 MPNGSLLDRLSC  123 (307)
T ss_dssp             CTTCBHHHHHHT
T ss_pred             cCCCcHHHHHHh
Confidence            999999988753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.50  E-value=6.5e-14  Score=87.61  Aligned_cols=90  Identities=16%  Similarity=0.121  Sum_probs=69.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC--hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS--LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+.  +..+|+|.+......  ....+.+.+|+.+++.++||||+.+.+.+...+..+++
T Consensus         8 ~~~~~~~lg~G~~g-~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            8 ELTLEEIIGIGGFG-KVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             SEEEEEEEEEETTE-EEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             heeeeeeeccCCCe-EEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            45677899999999 99999874  778999998643211  12246788999999999999999999988888889999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++++|.+.+..
T Consensus        85 ~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG   99 (271)
T ss_dssp             EECCTTEEHHHHHTS
T ss_pred             EEcCCCCCHHHHhhc
Confidence            999999998887753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.50  E-value=5.7e-14  Score=95.84  Aligned_cols=86  Identities=14%  Similarity=0.043  Sum_probs=71.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++.... +..||+|.+....   ...+.+.+|+.+|+.++|+||+.+.+++.. +.+|+||||
T Consensus       269 ~~~~~~lG~G~fg-~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          269 LRLEVKLGQGCFG-EVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETT-TEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             hhhheecccCCCe-EEEEEEECC-CceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            3677889999999 999998764 4569999986432   234678999999999999999998887765 668999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.+++|.+++..
T Consensus       343 ~~~gsL~~~l~~  354 (535)
T 2h8h_A          343 MSKGSLLDFLKG  354 (535)
T ss_dssp             CTTEEHHHHHSH
T ss_pred             hcCCcHHHHHhh
Confidence            999999998864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.50  E-value=8.2e-14  Score=90.45  Aligned_cols=89  Identities=12%  Similarity=0.021  Sum_probs=74.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-----CCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-----HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..   ..........|+.++..+.     ||||+.+.+.+...+.+
T Consensus        36 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~  111 (360)
T 3llt_A           36 AFLVIRKMGDGTFG-RVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM  111 (360)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred             EEEEEEEEcccCCe-EEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence            45677899999999 999999988999999999853   2333456778999999886     99999998888888889


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++||||+ +++|.+.+...
T Consensus       112 ~lv~e~~-~~~L~~~~~~~  129 (360)
T 3llt_A          112 CLIFEPL-GPSLYEIITRN  129 (360)
T ss_dssp             EEEECCC-CCBHHHHHHHT
T ss_pred             EEEEcCC-CCCHHHHHHhc
Confidence            9999999 78898888654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.50  E-value=4e-14  Score=90.92  Aligned_cols=92  Identities=18%  Similarity=0.197  Sum_probs=73.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeE--EEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRV--ALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~v--a~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++..+  ++|.+... ......+.+.+|+.++..+ +||||+.+.+.+...+.+|+
T Consensus        26 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           26 DIKFQDVIGEGNFG-QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GCEEEEEEECGGGC-EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HccceeeeecCCCc-eEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            55778899999999 99999987777654  89988532 2223345688999999999 89999999988888888999


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      +|||+++++|.+++...
T Consensus       104 v~e~~~~~~L~~~l~~~  120 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKS  120 (327)
T ss_dssp             EECCCTTCBHHHHHHTT
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999988653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.50  E-value=3.7e-14  Score=91.07  Aligned_cols=87  Identities=13%  Similarity=-0.093  Sum_probs=69.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC----CCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT----TRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++...  ++.||+|.+...   ........+|+.++..++||||+.+.+.+..    ...++
T Consensus        25 ~y~~~~~lg~G~~g-~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           25 PLQLLEVKARGRFG-CVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             EEEEEEEEECSTTC-EEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             hchhhheecccCce-EEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            45778899999999 99999865  788999998532   2233455678889999999999988876654    23479


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +||||+++++|.+.+..
T Consensus        99 lv~e~~~~g~L~~~l~~  115 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKA  115 (322)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHh
Confidence            99999999999998865

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.50  E-value=1e-13  Score=87.38  Aligned_cols=91  Identities=9%  Similarity=-0.027  Sum_probs=69.0

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ..+.+.+.||+|+|| .||++.+..+++.||+|.+............+..+...++.+.||||+.+.+.+...+..+++|
T Consensus         7 ~~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            7 DDLEPIMELGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HhhhhHHhcCCCCCe-EEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            355777899999999 9999999889999999998643222222333444555678889999999998888888899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+++ +|.+.+.
T Consensus        86 e~~~~-~l~~~l~   97 (290)
T 3fme_A           86 ELMDT-SLDKFYK   97 (290)
T ss_dssp             ECCSE-EHHHHHH
T ss_pred             ehhcc-chHHHHH
Confidence            99986 6655553

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.49  E-value=4.9e-15  Score=95.53  Aligned_cols=90  Identities=10%  Similarity=0.068  Sum_probs=66.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC------ChhhHHHHHHHHHHHhhCC---------CCCeEee
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ------SLVSSKRVFRELKMLCFFK---------HDNVSIT   79 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~~   79 (112)
                      .+.+.+.||+|+|| .||++.+  +++.||+|.+.....      .....+.+.+|+.+++.++         |+|++.+
T Consensus        21 ~y~~~~~lG~G~~g-~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           21 KLQRCEKIGEGVFG-EVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHTCEEEEEETTE-EEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cchheeeecccCce-EEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            45778899999999 9999987  578999999964321      1222367788998888875         6666644


Q ss_pred             ec-----------------cCC-------------CCCceEEEEeccCCcchhhhhhh
Q psy16893         80 QH-----------------TPY-------------TTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        80 ~~-----------------~~~-------------~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+                 .+.             ..+.+|+||||+++|++++.+..
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh
Confidence            33                 222             25779999999999988887754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.49  E-value=1.1e-13  Score=88.14  Aligned_cols=92  Identities=15%  Similarity=0.042  Sum_probs=73.5

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~   87 (112)
                      .+.+.+.||+|+|| .||++.+     ..+++.||+|.+... ......+.+.+|+.++..+ +||||+.+.+.+.. ..
T Consensus        28 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           28 RLKLGKPLGRGAFG-QVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             heeeeeEEcCCCce-eEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            44677899999999 9999973     456788999998643 2233456788999999999 69999988887655 45


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .++++|||+++++|.+.+...
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~  126 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSK  126 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTC
T ss_pred             ceEEEEEcCCCCcHHHHHHhc
Confidence            689999999999999988654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.49  E-value=1.7e-13  Score=87.51  Aligned_cols=84  Identities=15%  Similarity=0.078  Sum_probs=69.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++...  +..||+|.+..    ....+.+.+|+.+++.++||||+.+.+.+.+  ..++|||
T Consensus         9 ~~~~~~~lg~G~~g-~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e   79 (307)
T 2eva_A            9 EIEVEEVVGRGAFG-VVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME   79 (307)
T ss_dssp             GEEEEEEEECCSSS-EEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred             HeeeeeEeecCCCc-eEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence            45677899999999 99999864  67899999852    2334678899999999999999998887664  3799999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++++|.+.+..
T Consensus        80 ~~~~~~L~~~l~~   92 (307)
T 2eva_A           80 YAEGGSLYNVLHG   92 (307)
T ss_dssp             CCTTCBHHHHHHC
T ss_pred             cCCCCCHHHHHhc
Confidence            9999999998864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.49  E-value=1.1e-13  Score=90.43  Aligned_cols=89  Identities=28%  Similarity=0.300  Sum_probs=72.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce-----
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM-----   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-----   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++||||+.+.+.+...+..     
T Consensus        43 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           43 TYVSPTHVGSGAYG-SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             cEEEEeEEecCCCe-EEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            34567789999999 999999999999999999965444444467788999999999999999888876654443     


Q ss_pred             -EEEEeccCCcchhhhh
Q psy16893         90 -YPGLTLRLGEVHVRRW  105 (112)
Q Consensus        90 -~lv~e~~~~~~l~~~~  105 (112)
                       |++|||+.+ +|.+.+
T Consensus       122 ~~lv~e~~~~-~l~~~~  137 (371)
T 4exu_A          122 FYLVMPFMQT-DLQKIM  137 (371)
T ss_dssp             CEEEEECCCE-EHHHHT
T ss_pred             EEEEEccccc-cHHHHh
Confidence             999999985 666654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.49  E-value=1.3e-13  Score=90.82  Aligned_cols=90  Identities=12%  Similarity=-0.011  Sum_probs=73.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC--CCCeEeeeccCCCCCceEEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK--HDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~   93 (112)
                      |.+.+.||+|+|| .||++.+.. ++.||+|.+............+.+|+.++..+.  |+||+.+.+++...+.+|+||
T Consensus        58 y~~~~~LG~G~fg-~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           58 YSILKQIGSGGSS-KVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEECCSSE-EEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEEEEEccCCCe-EEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            5677899999999 999998764 888999998654334445577899999999997  599999988888878899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      | +.+++|.+++...
T Consensus       136 E-~~~~~L~~~l~~~  149 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK  149 (390)
T ss_dssp             E-CCSEEHHHHHHHC
T ss_pred             e-cCCCCHHHHHHhc
Confidence            9 5677898887653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.49  E-value=1.4e-13  Score=89.07  Aligned_cols=91  Identities=12%  Similarity=-0.030  Sum_probs=74.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC--CCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH--DNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv   92 (112)
                      .|.+.+.||+|+|| .||++.+. +++.||+|.+............+.+|+.++..+.|  +||+.+.+.+...+.+|++
T Consensus        10 ~y~i~~~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A           10 IYSILKQIGSGGSS-KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             EEEEEEEESCCSSE-EEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEEEEecCCCe-EEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45677899999999 99999874 68889999986544444445778899999999986  9999999988888889999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      || +.+++|.+++...
T Consensus        88 ~e-~~~~~L~~~l~~~  102 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK  102 (343)
T ss_dssp             EC-CCSEEHHHHHHHS
T ss_pred             Ee-CCCCCHHHHHHhc
Confidence            99 5677899888653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=8.5e-14  Score=91.28  Aligned_cols=90  Identities=13%  Similarity=-0.002  Sum_probs=71.0

Q ss_pred             hcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC-CCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY-TTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv   92 (112)
                      .+.+.||+|+|| .||++.....   ...+|+|.+... ......+.+.+|+.+++.++||||+.+.+.+. ..+..+++
T Consensus        92 ~~~~~LG~G~fg-~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           92 HFNEVIGRGHFG-CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEECCSSS-EEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             ecCcEeeeCCCe-EEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            456789999999 9999875433   245899988532 23344577899999999999999999888654 45678999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      |||+++++|.+++...
T Consensus       170 ~e~~~~g~L~~~l~~~  185 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE  185 (373)
T ss_dssp             EECCTTCBHHHHHHCT
T ss_pred             EECCCCCCHHHHHhhc
Confidence            9999999999988654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.49  E-value=2.4e-14  Score=92.50  Aligned_cols=87  Identities=10%  Similarity=0.025  Sum_probs=72.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChh---------------hHHHHHHHHHHHhhCCCCCeEee
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLV---------------SSKRVFRELKMLCFFKHDNVSIT   79 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~---------------~~~~~~~e~~~l~~l~h~niv~~   79 (112)
                      .+.+.+.||+|+|| .||++.+  ++..||+|.+........               ....+.+|+.++..++||||+.+
T Consensus        32 ~y~~~~~lg~G~~g-~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           32 DYRIIRTLNQGKFN-KIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             TEEEEEEEECCSSC-CEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             ceEEEEEEcCCCCe-EEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            45677899999999 9999988  788999999863321111               11678899999999999999999


Q ss_pred             eccCCCCCceEEEEeccCCcchhhh
Q psy16893         80 QHTPYTTRRMYPGLTLRLGEVHVRR  104 (112)
Q Consensus        80 ~~~~~~~~~~~lv~e~~~~~~l~~~  104 (112)
                      .+.+...+.+|+||||+++++|.++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHH
Confidence            9888888889999999999999887

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.49  E-value=1e-13  Score=95.94  Aligned_cols=86  Identities=13%  Similarity=0.079  Sum_probs=69.9

Q ss_pred             ccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++...  ..+..||+|.+.... .....+.+.+|+.+++.++||||+.+.+++.. +.+|+||||+.+
T Consensus       343 ~LG~G~fG-~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~  419 (613)
T 2ozo_A          343 ELGCGNFG-SVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG  419 (613)
T ss_dssp             EEEECSSS-EEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             EEecCCCc-EEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence            69999999 99998654  345679999996432 23345778999999999999999998887765 558999999999


Q ss_pred             cchhhhhhhcC
Q psy16893         99 EVHVRRWTKDQ  109 (112)
Q Consensus        99 ~~l~~~~~~~~  109 (112)
                      |+|.+++....
T Consensus       420 g~L~~~l~~~~  430 (613)
T 2ozo_A          420 GPLHKFLVGKR  430 (613)
T ss_dssp             CBHHHHHTTCT
T ss_pred             CcHHHHHhhcc
Confidence            99999886543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.48  E-value=1.2e-14  Score=93.35  Aligned_cols=90  Identities=16%  Similarity=0.049  Sum_probs=71.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+.+.+.+...+.+++||||
T Consensus         4 y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            4 YIKLDKLGEGTYA-TVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             eEEEEEEcCCCCE-EEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4667899999999 999999998999999999853221 11112345799999999999999999988888889999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      +.+ +|.+.+...
T Consensus        82 ~~~-~l~~~~~~~   93 (324)
T 3mtl_A           82 LDK-DLKQYLDDC   93 (324)
T ss_dssp             CSE-EHHHHHHHT
T ss_pred             ccc-CHHHHHHhc
Confidence            985 777777643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.48  E-value=5.6e-14  Score=98.17  Aligned_cols=92  Identities=14%  Similarity=-0.013  Sum_probs=75.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... ..........|..++..+ +|+||+.+...+...+.+|+|
T Consensus       342 ~f~~~~~LG~G~fG-~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV  420 (674)
T 3pfq_A          342 DFNFLMVLGKGSFG-KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV  420 (674)
T ss_dssp             TEEEEEESSBTTTB-CEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred             ceEEEEEEccCCCE-EEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence            34677899999999 999999999999999999864311 112345677899999887 599999999988888899999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|++.+..
T Consensus       421 ~E~~~gg~L~~~l~~  435 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQ  435 (674)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCcCCCcHHHHHHh
Confidence            999999999988865

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.48  E-value=1.8e-13  Score=88.79  Aligned_cols=89  Identities=28%  Similarity=0.295  Sum_probs=71.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC------c
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR------R   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+............+.+|+.+++.++||||+.+.+.+....      .
T Consensus        25 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           25 TYVSPTHVGSGAYG-SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             eEEEeeeEecCCCe-EEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            45677899999999 9999999989999999998654433444567889999999999999998877665543      3


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      .|++|||+.+ +|.+.+
T Consensus       104 ~~lv~e~~~~-~l~~~~  119 (353)
T 3coi_A          104 FYLVMPFMQT-DLQKIM  119 (353)
T ss_dssp             CEEEEECCSE-EGGGTT
T ss_pred             EEEEeccccC-CHHHHh
Confidence            5999999985 676655

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.48  E-value=5.2e-14  Score=88.43  Aligned_cols=87  Identities=15%  Similarity=0.080  Sum_probs=70.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC---------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT---------   85 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---------   85 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+....      ..+.+|+.++..++||||+.+.+.+..         
T Consensus        12 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           12 DFKEIELIGSGGFG-QVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HEEEEEEEECSSSC-CEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             ccceeeeeccCCce-EEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            45677899999999 99999998899999999985321      245679999999999999977665422         


Q ss_pred             -------CCceEEEEeccCCcchhhhhhhc
Q psy16893         86 -------TRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        86 -------~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                             ...++++|||+++++|.+++...
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR  114 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc
Confidence                   44589999999999999988653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.47  E-value=1.5e-13  Score=87.31  Aligned_cols=90  Identities=22%  Similarity=0.152  Sum_probs=70.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc--CChhhHHHHHHHHHHHhhCCCCCeEeeeccC--CCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF--QSLVSSKRVFRELKMLCFFKHDNVSITQHTP--YTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~~   90 (112)
                      .|.+.+.||+|+|| .||++.+..++..+|+|.+....  ........+.+|+.+++.++|+||+.+.+.+  ......|
T Consensus         6 ~y~i~~~lg~G~~g-~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            6 KYLMGDLLGEGSYG-KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CBCCCCEEEECSSC-EEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             ceeEeeEEecCCCe-EEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            45677899999999 99999999999999999986321  1122346788999999999999999888866  3456789


Q ss_pred             EEEeccCCcchhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWT  106 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~  106 (112)
                      ++|||+.++ +.+.+.
T Consensus        85 lv~e~~~~~-l~~~~~   99 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLD   99 (305)
T ss_dssp             EEEECCSEE-HHHHHH
T ss_pred             EEehhccCC-HHHHHH
Confidence            999999987 555554

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.47  E-value=2.5e-13  Score=86.57  Aligned_cols=89  Identities=20%  Similarity=0.125  Sum_probs=67.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-----------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-----------   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-----------   83 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...  .....+.+.+|+.+++.++||||+.+.+.+           
T Consensus        12 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           12 RYMDLKPLGCGGNG-LVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TEEEEEECC------CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             ceeEEEEeccCCCe-EEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            44677899999999 9999999989999999988532  234457788999999999999999876543           


Q ss_pred             ---CCCCceEEEEeccCCcchhhhhhh
Q psy16893         84 ---YTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        84 ---~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                         ......|++|||+. ++|.+.+..
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhc
Confidence               33467899999998 478887754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.47  E-value=3.4e-14  Score=91.43  Aligned_cols=87  Identities=11%  Similarity=0.020  Sum_probs=72.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....    ...+.+|+.+++.+ +|+||+.+.+.+...+..++||
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A           10 NFRVGKKIGCGNFG-ELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TEEEEEECCC-CTT-SEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEeeccCCc-eEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            45677899999999 999999988999999998853221    23477899999999 8999999888887788899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+ +++|.+.+..
T Consensus        85 e~~-~~~L~~~~~~   97 (330)
T 2izr_A           85 ELL-GPSLEDLFDL   97 (330)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             EeC-CCCHHHHHHH
Confidence            999 8889888764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.47  E-value=1.3e-13  Score=88.31  Aligned_cols=89  Identities=12%  Similarity=0.053  Sum_probs=73.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC------CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT------TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~   87 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+....   .....+.+|+.++..+ .||||+.+.+.+..      .+
T Consensus        25 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           25 IFELVELVGNGTYG-QVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             cEEEEEEeccCCCE-EEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            44677899999999 99999998899999999985322   2235678899999998 69999987776543      46


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+|++|||+++++|.+.+..
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~  120 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKN  120 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHH
T ss_pred             eEEEEEEcCCCCcHHHHHHh
Confidence            78999999999999988865

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.47  E-value=1.3e-13  Score=88.68  Aligned_cols=93  Identities=14%  Similarity=0.022  Sum_probs=69.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCe----EEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRR----VALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~----va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..++..    +|+|.+... ......+.+.+|+.+++.++||||+.+.+.+.... .+
T Consensus        16 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           16 EFKKIKVLGSGAFG-TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GEEEEEEEEEETTE-EEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HcccceEEeeCCCe-EEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            55777899999999 9999998777654    578877432 22233567889999999999999999888776644 78


Q ss_pred             EEEeccCCcchhhhhhhcCC
Q psy16893         91 PGLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~~~  110 (112)
                      ++++|+.+++|.+.+....+
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~  112 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKD  112 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTT
T ss_pred             EEEEecCCCcHHHHHHhcCC
Confidence            99999999999998876443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.46  E-value=1.8e-13  Score=87.27  Aligned_cols=91  Identities=14%  Similarity=-0.056  Sum_probs=68.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCC---CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCC----
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR----   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----   87 (112)
                      .+.+.+.||+|+|| .||++....   ++..||+|.+..........+.+.+|+.+++.++||||+.+.+.+....    
T Consensus        35 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  113 (313)
T 3brb_A           35 LLILGKILGEGEFG-SVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI  113 (313)
T ss_dssp             GEEEEEEEEC-CCC-CEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred             HeeeccceeecCCe-EEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence            45677889999999 999986543   4557999998644334444577889999999999999998877665422    


Q ss_pred             -ceEEEEeccCCcchhhhhh
Q psy16893         88 -RMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        88 -~~~lv~e~~~~~~l~~~~~  106 (112)
                       ..+++|||+++++|.+.+.
T Consensus       114 ~~~~~v~e~~~~~~L~~~l~  133 (313)
T 3brb_A          114 PKPMVILPFMKYGDLHTYLL  133 (313)
T ss_dssp             -CEEEEEECCTTCBHHHHHH
T ss_pred             cccEEEEecccCCCHHHHHH
Confidence             4699999999999988874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.46  E-value=3.4e-13  Score=87.90  Aligned_cols=90  Identities=20%  Similarity=0.173  Sum_probs=72.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~   89 (112)
                      .|.+.+.||+|+|| .||++.+..++..||+|.+... ......+.+.+|+.++..++||||+.+.+.+..     ...+
T Consensus        28 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           28 RYTNLSYIGEGAYG-MVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cEEEEEEeecCCCe-EEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            45677899999999 9999999989999999998532 233445778899999999999999987775543     2468


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+.+ +|.+.+..
T Consensus       106 ~iv~e~~~~-~L~~~l~~  122 (364)
T 3qyz_A          106 YIVQDLMET-DLYKLLKT  122 (364)
T ss_dssp             EEEEECCSE-EHHHHHHH
T ss_pred             EEEEcccCc-CHHHHHHh
Confidence            999999985 78887754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.46  E-value=2e-13  Score=87.60  Aligned_cols=86  Identities=15%  Similarity=0.116  Sum_probs=72.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCC--CCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYT--TRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..     ...+.+.+|+.++..+. |+||+.+.+.+..  ....++
T Consensus        37 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           37 DYQLVRKLGRGKYS-EVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             ceEEEEEecccCCe-EEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            34677899999999 999999988999999999852     22356889999999997 9999988887665  567899


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      +|||+.+++|.+.+.
T Consensus       111 v~e~~~~~~l~~~~~  125 (330)
T 3nsz_A          111 VFEHVNNTDFKQLYQ  125 (330)
T ss_dssp             EEECCCCCCHHHHGG
T ss_pred             EEeccCchhHHHHHH
Confidence            999999998877653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.46  E-value=1.9e-13  Score=88.78  Aligned_cols=92  Identities=22%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC---------hhhHHHHHHHHHHHhhCCCCCeEeeeccC--
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS---------LVSSKRVFRELKMLCFFKHDNVSITQHTP--   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~~~~~~--   83 (112)
                      .+.+.+.||+|+|| .||++.+.. +..||+|.+......         ....+.+.+|+.+++.++||||+.+.+.+  
T Consensus        23 ~y~~~~~lg~G~~g-~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  100 (362)
T 3pg1_A           23 PYTVQRFISSGSYG-AVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH  100 (362)
T ss_dssp             SCEEEEEEEEETTE-EEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred             ceEEeEEeccCCCE-EEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence            45677899999999 999998754 889999988543211         12236789999999999999999877755  


Q ss_pred             ---CCCCceEEEEeccCCcchhhhhhhcC
Q psy16893         84 ---YTTRRMYPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        84 ---~~~~~~~lv~e~~~~~~l~~~~~~~~  109 (112)
                         .....+|+||||+.+ ++.+.+....
T Consensus       101 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~  128 (362)
T 3pg1_A          101 FEEPAMHKLYLVTELMRT-DLAQVIHDQR  128 (362)
T ss_dssp             CCTTTCCEEEEEEECCSE-EHHHHHHCTT
T ss_pred             ccCCCcceEEEEEccCCC-CHHHHHHhcc
Confidence               334568999999985 6787776543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.46  E-value=6e-13  Score=83.72  Aligned_cols=92  Identities=10%  Similarity=-0.019  Sum_probs=72.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCC---CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      ..+.+.+.||+|+|| .||++....   ++..||+|.+... ......+.+.+|+.+++.++||||+.+.+.+.. +..|
T Consensus        12 ~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           12 EDVVLNRILGEGFFG-EVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             GGEEEEEEEEECSSS-EEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cceEEEEEEEecCCe-eEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            356778899999999 999987432   3446999998643 233445778899999999999999988887665 3468


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++|||+++++|.+.+...
T Consensus        89 ~v~e~~~~~~L~~~l~~~  106 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN  106 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhc
Confidence            999999999999888654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.45  E-value=1.9e-13  Score=85.87  Aligned_cols=86  Identities=14%  Similarity=0.097  Sum_probs=69.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC-CCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY-TTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+.  +..+|+|.+...    ...+.+.+|+.++..++|||++.+.+.+. ..+.+|++|
T Consensus        22 ~y~~~~~lg~G~~g-~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           22 ELKLLQTIGKGEFG-DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hceEEeEEecCCCc-eEEEEEEc--CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            45788899999999 99998764  778999998532    23467889999999999999998888654 455789999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++++|.+++..
T Consensus        95 e~~~~~~L~~~l~~  108 (278)
T 1byg_A           95 EYMAKGSLVDYLRS  108 (278)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999888754

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.45  E-value=6.1e-13  Score=86.02  Aligned_cols=90  Identities=22%  Similarity=0.207  Sum_probs=72.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~   89 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+... ........+.+|+.+++.++||||+.+.+.+..     ....
T Consensus        12 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           12 DFQLKSLLGEGAYG-VVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ceEEeeEEcCCCCe-EEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            45777899999999 9999999889999999998532 233445678899999999999999987765443     3678


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      |++|||+.+ +|.+.+..
T Consensus        90 ~lv~e~~~~-~L~~~~~~  106 (353)
T 2b9h_A           90 YIIQELMQT-DLHRVIST  106 (353)
T ss_dssp             EEEECCCSE-EHHHHHHH
T ss_pred             EEEEeccCc-cHHHHHhh
Confidence            999999985 67776654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.45  E-value=8.2e-14  Score=89.51  Aligned_cols=91  Identities=9%  Similarity=-0.081  Sum_probs=71.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCe----EEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRR----VALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~----va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..++..    +++|.+.... .....+.+.+|+.++..++||||+.+.+++.. +..+
T Consensus        14 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~   90 (325)
T 3kex_A           14 ELRKLKVLGSGVFG-TVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ   90 (325)
T ss_dssp             TEEEEEEEECCSSC-EEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred             HceeeeeeeecCCc-eEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence            55677899999999 9999998777765    7777764221 12223456789999999999999998887654 5589


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      +||||+.+++|.+.+...
T Consensus        91 ~v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             EEEECCTTCBSHHHHHSS
T ss_pred             EEEEeCCCCCHHHHHHHc
Confidence            999999999999988654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.45  E-value=2.5e-13  Score=86.28  Aligned_cols=86  Identities=14%  Similarity=0.072  Sum_probs=68.6

Q ss_pred             hhhcc-cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHH-hhCCCCCeEeeeccCCC----CCc
Q psy16893         15 GTMMH-DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKML-CFFKHDNVSITQHTPYT----TRR   88 (112)
Q Consensus        15 ~~~~~-~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~   88 (112)
                      .+.+. +.||+|+|| .||++.+..+++.||+|.+..       .....+|+.++ +..+||||+.+.+.+..    ...
T Consensus        18 ~y~~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           18 DYKVTSQVLGLGING-KVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             TEEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             chhhcCcccccCCCe-EEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            33444 789999999 999999999999999999842       13456788777 56689999987776544    667


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++|||+++++|.+.+...
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~  109 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDR  109 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHC
T ss_pred             EEEEEeecCCCcHHHHHHhc
Confidence            89999999999999988654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.45  E-value=7.7e-14  Score=97.31  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=74.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+... ........+.+|+.++..++||||+.+.+.+..      .+.
T Consensus        15 rY~i~~~LG~G~fG-~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           15 PWEMKERLGTGGFG-YVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             --CCCCCCCBCSSS-BCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CeEEEEEEeeCCCe-EEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            45788899999999 9999999888999999988643 233445678999999999999999987776543      567


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      .|+||||+++++|.+.+..
T Consensus        93 ~~LVmEy~~ggsL~~~L~~  111 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQ  111 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHS
T ss_pred             EEEEEEeCCCCCHHHHHHh
Confidence            8999999999999988865

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.45  E-value=1.9e-13  Score=90.38  Aligned_cols=81  Identities=15%  Similarity=0.084  Sum_probs=65.6

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHH-hhCCCCCeEeeeccCCC----CCceEEEEe
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKML-CFFKHDNVSITQHTPYT----TRRMYPGLT   94 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e   94 (112)
                      +.||+|+|| .||++.+..+++.||+|.+..       .....+|+.++ +..+||||+.+.+.+..    ...+|+|||
T Consensus        68 ~~LG~G~~g-~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           68 QVLGLGING-KVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             EEEEEETTE-EEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ceeeeccCe-EEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            689999999 999999999999999999842       13456788776 44579999987775543    567899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+.+|+|.+++...
T Consensus       140 ~~~gg~L~~~l~~~  153 (400)
T 1nxk_A          140 CLDGGELFSRIQDR  153 (400)
T ss_dssp             CCCSEEHHHHHHCC
T ss_pred             eCCCCcHHHHHHHh
Confidence            99999999998653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.45  E-value=1.6e-13  Score=89.37  Aligned_cols=86  Identities=9%  Similarity=-0.001  Sum_probs=68.1

Q ss_pred             hhcccccccCCcceEEEEE-----EcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC---CCCeEeeeccCCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAV-----TDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK---HDNVSITQHTPYTTR   87 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~-----~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~   87 (112)
                      +.+.+.||+|+|| .||++     .+..+++.||+|.+...     ....+..|+.++..+.   |+|++.+.+.+...+
T Consensus        67 y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           67 VYVHHLLGEGAFA-QVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             EEEEEEEEECSSE-EEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             EEEEEEeeccCCE-EEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            4566789999999 99999     45677889999998532     2345667777777776   999999988888878


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ..|+||||+++|+|.+.+..
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHH
T ss_pred             CcEEEEeccCCCcHHHHHHH
Confidence            89999999999999998863

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.43  E-value=1.1e-13  Score=96.77  Aligned_cols=90  Identities=17%  Similarity=0.075  Sum_probs=69.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCc-----
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR-----   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----   88 (112)
                      .+.+.+.||+|+|| .||++.+.. +++.||+|.+... ........+.+|+.++..++||||+.+.+++...+.     
T Consensus        81 ~y~i~~~lg~G~~g-~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           81 QYEVKGCIAHGGLG-WIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             ceEEEEEEeeCCCe-EEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            34677899999999 999998765 6788999988532 223344678899999999999999988877665333     


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      .|+||||+++++|.+.+.
T Consensus       159 ~~lv~E~~~g~~L~~~~~  176 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG  176 (681)
T ss_dssp             EEEEEECCCCEECC----
T ss_pred             eEEEEEeCCCCcHHHHHh
Confidence            799999999999877654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=4.9e-14  Score=91.70  Aligned_cols=92  Identities=13%  Similarity=0.028  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcC---CCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP---RDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~---~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+.   .+++.||+|.+.....  .......+.+|+.++..+ .|+||+.+...+...+.
T Consensus        55 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           55 NFELLKVLGTGAYG-KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GEEEEEEEEETTTE-EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             ceEEEEEeccCCCE-EEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            55777899999999 99999874   4788999999864211  111234566788899988 59999999888888888


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|+||||+++++|.+.+..
T Consensus       134 ~~lv~e~~~~~~L~~~l~~  152 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ  152 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH
T ss_pred             EEEEeecCCCCCHHHHHHH
Confidence            9999999999999998864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.43  E-value=4.4e-13  Score=86.30  Aligned_cols=93  Identities=14%  Similarity=0.022  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeE----EEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRV----ALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~v----a~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..++..+    ++|.+... ......+.+.+|+.++..++||||+.+.+.+.... .+
T Consensus        16 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           16 EFKKIKVLGSGAFG-TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HceEEEEeeeCCCe-EEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            55778899999999 99999987777654    66666422 22234567889999999999999998888776644 78


Q ss_pred             EEEeccCCcchhhhhhhcCC
Q psy16893         91 PGLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~~~  110 (112)
                      ++++|+.+++|.+.+....+
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~  112 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKD  112 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTT
T ss_pred             EEEEecCCCcHHHHHHhcCC
Confidence            99999999999998876443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=4.5e-13  Score=87.85  Aligned_cols=84  Identities=19%  Similarity=0.101  Sum_probs=64.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC-----------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP-----------   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-----------   83 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....      ...+|+.+++.++||||+.+.+.+           
T Consensus         8 ~y~~~~~lG~G~fg-~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            8 KYSLGKTLGTGSFG-IVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             TEEEEEEEECC-CE-EEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             eEEEEEEEEeccCE-EEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            56778899999999 999999999999999998853211      123699999999999999777655           


Q ss_pred             ---------------------------CCCCceEEEEeccCCcchhhhhh
Q psy16893         84 ---------------------------YTTRRMYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        84 ---------------------------~~~~~~~lv~e~~~~~~l~~~~~  106 (112)
                                                 .....+++||||+++ +|.+.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~  129 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLK  129 (383)
T ss_dssp             -----------------------------CCEEEEEECCCSE-EHHHHHH
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHH
Confidence                                       223458999999995 6555543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.42  E-value=7.7e-14  Score=91.34  Aligned_cols=91  Identities=9%  Similarity=-0.077  Sum_probs=66.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHH---HHHhhCCCCCeEeeec-------cC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFREL---KMLCFFKHDNVSITQH-------TP   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~---~~l~~l~h~niv~~~~-------~~   83 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... ......+.+.+|+   ..++.++||||+.+..       .+
T Consensus        74 ~y~~~~~lG~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           74 TLVRGTVLGQEDPY-AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             eEEEcceeecCCCE-EEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            34667899999999 99999998889999999986432 2233456788999   4555667999996653       22


Q ss_pred             CCCC-----------------ceEEEEeccCCcchhhhhhh
Q psy16893         84 YTTR-----------------RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        84 ~~~~-----------------~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...+                 ..|++|||+ +|+|.+.+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence            2221                 378999999 5789888764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.41  E-value=6.3e-13  Score=84.75  Aligned_cols=82  Identities=12%  Similarity=-0.003  Sum_probs=58.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+..+..+++.++||||+.+.+.+...+.+|++||
T Consensus        26 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           26 DLENLGEMGSGTCG-QVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GEEEEEEC-------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccccceeeecCCe-eEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            45667899999999 99999998899999999986432212222334444457788899999999988888888999999


Q ss_pred             ccC
Q psy16893         95 LRL   97 (112)
Q Consensus        95 ~~~   97 (112)
                      |+.
T Consensus       105 ~~~  107 (318)
T 2dyl_A          105 LMG  107 (318)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            993

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.41  E-value=8.8e-13  Score=84.54  Aligned_cols=89  Identities=16%  Similarity=0.084  Sum_probs=70.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccC--------CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTP--------YT   85 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~--------~~   85 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..  ......+.+.+|+.++..+. ||||+.+.+.+        ..
T Consensus        29 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           29 RLRVRRVLAEGGFA-FVYEAQDVGSGREYALKRLLS--NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             EEEEEEEEECCSSE-EEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             eEEEEEEEccCCce-EEEEEEECCCCcEEEEEEecC--CchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            34677899999999 999999988999999998843  22344567889999999996 99999876654        33


Q ss_pred             CCceEEEEeccCCcchhhhhhh
Q psy16893         86 TRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        86 ~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...++++|||+. |+|.+.+..
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHH
T ss_pred             CceEEEEEEecC-CCHHHHHHH
Confidence            556899999997 578777754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.41  E-value=5.6e-13  Score=85.54  Aligned_cols=89  Identities=11%  Similarity=0.099  Sum_probs=69.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHH-HHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELK-MLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.... .......+..|+. +++.++||||+.+.+.+...+..+++|
T Consensus        23 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           23 DLKDLGEIGRGAYG-SVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SEEC-CEEEECSSE-EEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhehheeccCCCE-EEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            44677889999999 99999998899999999986432 2333345556665 777888999999998888888899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+.+ +|.+.+.
T Consensus       101 e~~~~-~l~~~~~  112 (327)
T 3aln_A          101 ELMST-SFDKFYK  112 (327)
T ss_dssp             CCCSE-EHHHHHH
T ss_pred             eecCC-ChHHHHH
Confidence            99996 5555543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.41  E-value=1e-12  Score=83.19  Aligned_cols=85  Identities=15%  Similarity=0.083  Sum_probs=65.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhh--CCCCCeEeeeccC----CCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF--FKHDNVSITQHTP----YTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~----~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++..  +++.||+|.+...     ....+..|.+++..  ++||||+.+.+.+    .....
T Consensus         9 ~y~~~~~lg~G~~g-~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            9 DITLLECVGKGRYG-EVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             GCEEEEEEEECSSE-EEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cEEEEEeeccCCCc-EEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            45677899999999 9999986  5788999998531     23445556666665  7899999876653    23456


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+++++|.++++.
T Consensus        81 ~~lv~e~~~~g~L~~~l~~   99 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQL   99 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTT
T ss_pred             eEEehhhccCCCHHHHHhh
Confidence            8999999999999998854

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.41  E-value=1.3e-12  Score=91.13  Aligned_cols=91  Identities=12%  Similarity=-0.016  Sum_probs=71.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCC---CCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRD---GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~---~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++.+..+   +..+|+|.+... ......+.+.+|+.+++.++||||+.+.+.+.. +..|+|
T Consensus       392 y~i~~~LG~G~fG-~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv  468 (656)
T 2j0j_A          392 IELGRCIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII  468 (656)
T ss_dssp             EEEEEEEECCSSC-CEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             EEEeeEEeeCCCE-EEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEE
Confidence            3566789999999 9999986543   456999988532 223345678899999999999999988887644 558999


Q ss_pred             EeccCCcchhhhhhhcC
Q psy16893         93 LTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~  109 (112)
                      |||+++++|.+++....
T Consensus       469 ~E~~~~g~L~~~l~~~~  485 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRK  485 (656)
T ss_dssp             EECCTTCBHHHHHHHTT
T ss_pred             EEcCCCCcHHHHHHhcc
Confidence            99999999999886543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.40  E-value=1e-12  Score=83.89  Aligned_cols=91  Identities=12%  Similarity=-0.035  Sum_probs=74.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC--CCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK--HDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+. +++.+|+|.+............+.+|+.++..+.  |+|++.+.+.+...+.+|++
T Consensus        29 ~y~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           29 IYSILKQIGSGGSS-KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             EEEEEEEEECCSSE-EEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEecCCCCE-EEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            35777899999999 99999875 5888999998644334445577889999999997  59999998888888889999


Q ss_pred             EeccCCcchhhhhhhc
Q psy16893         93 LTLRLGEVHVRRWTKD  108 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~  108 (112)
                      || +.+++|.+.+...
T Consensus       107 ~e-~~~~~L~~~l~~~  121 (313)
T 3cek_A          107 ME-CGNIDLNSWLKKK  121 (313)
T ss_dssp             EC-CCSEEHHHHHHHC
T ss_pred             Ee-cCCCcHHHHHHhc
Confidence            99 5677898888653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.40  E-value=5.5e-13  Score=84.93  Aligned_cols=92  Identities=21%  Similarity=0.082  Sum_probs=68.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC---hhhHHHHHHHHHHHhhC---CCCCeEeeeccCCCCC-
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS---LVSSKRVFRELKMLCFF---KHDNVSITQHTPYTTR-   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~-   87 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+......   ........+|+.+++.+   .||||+.+.+.+.... 
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A           10 RYEPVAEIGVGAYG-TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             CCEEEEEECCSSSC-CEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             ceEEEEEEecCCCe-EEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            45677899999999 9999999899999999998532211   11124456677666655   4999998877665432 


Q ss_pred             ----ceEEEEeccCCcchhhhhhhc
Q psy16893         88 ----RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ----~~~lv~e~~~~~~l~~~~~~~  108 (112)
                          .++++|||+.+ +|.+.+...
T Consensus        89 ~~~~~~~lv~e~~~~-~L~~~~~~~  112 (308)
T 3g33_A           89 DREIKVTLVFEHVDQ-DLRTYLDKA  112 (308)
T ss_dssp             SSEEEEEEEEECCCC-BHHHHHHTC
T ss_pred             CCceeEEEEehhhhc-CHHHHHhhc
Confidence                58999999985 788877654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.39  E-value=8.3e-13  Score=87.18  Aligned_cols=83  Identities=20%  Similarity=0.111  Sum_probs=61.2

Q ss_pred             cccccccCCcceEEEEEEcC--CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccC--CCCCceEEEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDP--RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP--YTTRRMYPGL   93 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~--~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~~lv~   93 (112)
                      ..+.||+|+|| .||++...  .++..||+|.+....    ....+.+|+.+++.++||||+.+.+.+  .....+|+||
T Consensus        25 ~g~~lG~G~~g-~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           25 EGCKVGRGTYG-HVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             SSCCCC------EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             cCcEeeecCCe-EEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            34579999999 99999854  567889999985322    224577899999999999999888876  4467899999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      ||+.+ +|.+.+.
T Consensus       100 e~~~~-~l~~~~~  111 (405)
T 3rgf_A          100 DYAEH-DLWHIIK  111 (405)
T ss_dssp             ECCSE-EHHHHHH
T ss_pred             eCCCC-CHHHHHH
Confidence            99986 5666654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.39  E-value=2.3e-13  Score=86.76  Aligned_cols=92  Identities=17%  Similarity=-0.042  Sum_probs=68.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhC----CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFF----KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.......    .....+.+|+.++..+    +|+||+.+.+.+...
T Consensus        32 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           32 EYRLGPLLGKGGFG-TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             -CEEEEEEEEETTE-EEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             ceEEeeEEEcCCCE-EEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            45777899999999 99999998899999999986432111    1123355788888888    899999999988887


Q ss_pred             CceEEEEec-cCCcchhhhhhh
Q psy16893         87 RRMYPGLTL-RLGEVHVRRWTK  107 (112)
Q Consensus        87 ~~~~lv~e~-~~~~~l~~~~~~  107 (112)
                      +..++++|+ +.+++|.+.+..
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~~  132 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYITE  132 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHHH
T ss_pred             CeEEEEEEecCCCCCHHHHHHh
Confidence            888999999 788999888764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.39  E-value=1.5e-12  Score=83.77  Aligned_cols=85  Identities=13%  Similarity=0.128  Sum_probs=68.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhh--CCCCCeEeeeccCCCCC----c
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF--FKHDNVSITQHTPYTTR----R   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~   88 (112)
                      .+.+.+.||+|+|| .||++..  +++.||+|.+..     .....+.+|+.++..  ++||||+.+.+.+....    .
T Consensus        43 ~y~~~~~lg~G~~g-~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           43 TIVLQESIGKGRFG-EVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HCEEEEEEEEETTE-EEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             cEEEEeeecCCCCc-EEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            44677899999999 9999987  478899999852     223556778888877  68999998877665543    7


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+++++|.+.+..
T Consensus       115 ~~lv~e~~~~g~L~~~l~~  133 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNR  133 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHH
T ss_pred             eEEEEeecCCCcHHHHHhc
Confidence            8999999999999998864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.39  E-value=5.6e-13  Score=84.29  Aligned_cols=88  Identities=11%  Similarity=-0.027  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+....    ....+.+|+.++..+ .|+|++.+...+......+++|
T Consensus        11 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           11 HYKVGRRIGEGSFG-VIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TEEEEEEEEECSSC-EEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEEEeecCCE-EEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            45677899999999 99999988899999999885322    223467789999998 6999998888777788899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+ +++|.+.+...
T Consensus        86 e~~-~~~L~~~l~~~   99 (298)
T 1csn_A           86 DLL-GPSLEDLLDLC   99 (298)
T ss_dssp             ECC-CCBHHHHHHHT
T ss_pred             Eec-CCCHHHHHHHh
Confidence            999 88999888653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.38  E-value=8.2e-14  Score=88.96  Aligned_cols=90  Identities=13%  Similarity=-0.020  Sum_probs=72.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++....   .+|+|.+..........+.+.+|+.+++.++|+||+.+.+.+...+.++++||
T Consensus        34 ~~~~~~~lg~G~~g-~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e  109 (319)
T 2y4i_B           34 QLEIGELIGKGRFG-QVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS  109 (319)
T ss_dssp             CEECCCBCCCSSSS-EEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred             HeEEeeEeccCCce-EEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence            44677899999999 999998753   49999986433222233456789999999999999999888888788999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus       110 ~~~~~~L~~~l~~~  123 (319)
T 2y4i_B          110 LCKGRTLYSVVRDA  123 (319)
T ss_dssp             CCCSEEHHHHTTSS
T ss_pred             cccCCcHHHHHHhc
Confidence            99999999988653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.38  E-value=6.6e-13  Score=83.72  Aligned_cols=92  Identities=18%  Similarity=0.079  Sum_probs=65.2

Q ss_pred             hhhcccccccCCcceEEEEEEcC-CCCC--eEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-RDGR--RVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-~~~~--~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++... .++.  .||+|.+..... .....+.+.+|+.++..++||||+.+.+.+.... .+
T Consensus        19 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           19 DLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GEEEEEECC----C-CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             HeeeeeeecCCCce-eEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            45778899999999 99998743 2333  589998864321 2234567889999999999999999888776644 79


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      +++||+++++|.+.+...
T Consensus        97 ~v~e~~~~~~L~~~l~~~  114 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKH  114 (291)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             eeEecccCCCHHHHHHhc
Confidence            999999999999988653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.38  E-value=1.6e-12  Score=83.55  Aligned_cols=86  Identities=14%  Similarity=0.082  Sum_probs=63.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHH--HhhCCCCCeEeeec-----cCCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKM--LCFFKHDNVSITQH-----TPYTTR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~-----~~~~~~   87 (112)
                      .+.+.+.||+|+|| .||++..  +++.||+|.+...     ....+..|..+  +..++|+||+.+..     ......
T Consensus        14 ~y~~~~~lg~G~~g-~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           14 NLKLLELIGRGRYG-AVYKGSL--DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             SEEEEEEEEECSSE-EEEEEEE--TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             HhheeeecccCCCe-EEEEEEE--CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            55778899999999 9999875  5788999998532     12233334444  44578999997654     333355


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .+++||||+++++|.+++...
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~  106 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLH  106 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC
T ss_pred             eEEEEEecCCCCcHHHHHhhc
Confidence            679999999999999988643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.37  E-value=3.5e-12  Score=84.95  Aligned_cols=89  Identities=17%  Similarity=0.045  Sum_probs=71.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC------CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF------KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...   ......+.+|+.++..+      .|+|++.+.+.+...+.
T Consensus        98 ry~~~~~LG~G~fg-~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           98 RYEVLKVIGKGSFG-QVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TEEEEEEEEESSSE-EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             cEEEEEEcccCccE-EEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            35677899999999 9999999999999999998532   23345566777777666      57799998888877888


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++|||+.+ +|.+.+...
T Consensus       174 ~~lv~e~~~~-~L~~~l~~~  192 (429)
T 3kvw_A          174 ICMTFELLSM-NLYELIKKN  192 (429)
T ss_dssp             EEEEECCCCC-BHHHHHHHT
T ss_pred             EEEEEeccCC-CHHHHHHhc
Confidence            9999999975 788877654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.36  E-value=2.2e-12  Score=83.35  Aligned_cols=82  Identities=16%  Similarity=0.039  Sum_probs=62.9

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHH-HHHhhCCCCCeEeeeccCCC----CCceEEEE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFREL-KMLCFFKHDNVSITQHTPYT----TRRMYPGL   93 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~----~~~~~lv~   93 (112)
                      .+.||+|+|| .||++.+..+++.||+|.+...   ..    ..+|+ ..+..+.|+|++.+.+.+..    ...+++||
T Consensus        34 ~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~---~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           34 KQVLGLGVNG-KVLECFHRRTGQKCALKLLYDS---PK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             EEEEEEETTE-EEEEEEETTTCCEEEEEEEESS---HH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ceeeeeCCCe-EEEEEEECCCCCEEEEEEecCc---HH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            4579999999 9999999999999999998531   11    12222 34566789999987776544    44589999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++++|.+++...
T Consensus       106 e~~~gg~L~~~l~~~  120 (336)
T 3fhr_A          106 ECMEGGELFSRIQER  120 (336)
T ss_dssp             ECCTTEEHHHHHHTC
T ss_pred             eccCCCCHHHHHHhc
Confidence            999999999988654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.35  E-value=1.1e-12  Score=85.82  Aligned_cols=88  Identities=11%  Similarity=0.029  Sum_probs=69.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC--------CCCeEeeeccCC--
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK--------HDNVSITQHTPY--   84 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~--   84 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..   .....+.+.+|+.+++.+.        |+||+.+.+.+.  
T Consensus        38 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           38 RYHVIRKLGWGHFS-TVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             eEEEEEEeeecCCe-eEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            35677899999999 999999988999999999853   2334567788999998885        778998777655  


Q ss_pred             --CCCceEEEEeccCCcchhhhhhh
Q psy16893         85 --TTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        85 --~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                        ....+|+||||+.+ ++++.+..
T Consensus       114 ~~~~~~~~lv~e~~~~-~l~~~~~~  137 (397)
T 1wak_A          114 GVNGTHICMVFEVLGH-HLLKWIIK  137 (397)
T ss_dssp             ETTEEEEEEEECCCCC-BHHHHHHH
T ss_pred             CCCCceEEEEEeccCc-cHHHHHHh
Confidence              45678999999955 56666644

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.35  E-value=7.8e-13  Score=84.65  Aligned_cols=93  Identities=18%  Similarity=0.026  Sum_probs=67.8

Q ss_pred             hhhhcccccccCCcceEEEEEEcC-CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC---CCCCeEeeeccCC-----
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDP-RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF---KHDNVSITQHTPY-----   84 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~-~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----   84 (112)
                      ..+.+.+.||+|+|| .||++.+. .+++.||+|.+............+.+|+.+++.+   .||||+.+.+.+.     
T Consensus        11 ~~y~~~~~lg~G~~g-~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           11 QQYECVAEIGEGAYG-KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GTEEEEEEEEEETTE-EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hceeeeeeecccccE-EEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            355778899999999 99999885 5678899998864322222223455666666555   8999998877654     


Q ss_pred             CCCceEEEEeccCCcchhhhhhhc
Q psy16893         85 TTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        85 ~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ....++++|||+.+ +|.+.+...
T Consensus        90 ~~~~~~lv~e~~~~-~L~~~l~~~  112 (326)
T 1blx_A           90 RETKLTLVFEHVDQ-DLTTYLDKV  112 (326)
T ss_dssp             SEEEEEEEEECCSC-BHHHHHHHS
T ss_pred             CCceEEEEEecCCC-CHHHHHHhc
Confidence            45678999999985 788877653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=2.9e-12  Score=82.26  Aligned_cols=85  Identities=15%  Similarity=0.080  Sum_probs=65.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC--CCCCeEeeeccCCCC----Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF--KHDNVSITQHTPYTT----RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~   88 (112)
                      .+.+.+.||+|+|| .||++.+.  +..||+|.+...     .......|..++...  +||||+.+.+.+...    ..
T Consensus        38 ~y~~~~~lg~G~~g-~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           38 QIQMVKQIGKGRYG-EVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             HCEEEEEEEEETTE-EEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             ceEEEeEeecCCCe-EEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            44677899999999 99999875  788999988421     123344555555544  899999887765543    67


Q ss_pred             eEEEEeccCCcchhhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~  107 (112)
                      +|++|||+++++|.++++.
T Consensus       110 ~~lv~e~~~~g~L~~~l~~  128 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKS  128 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHH
T ss_pred             eEEEEeccCCCcHHHHhhc
Confidence            8999999999999998864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.33  E-value=4.8e-12  Score=82.62  Aligned_cols=89  Identities=9%  Similarity=-0.073  Sum_probs=57.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHH---HHHhhCCCCCeEeeeccCC-------
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFREL---KMLCFFKHDNVSITQHTPY-------   84 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~---~~l~~l~h~niv~~~~~~~-------   84 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+....... ...+.+.+|+   ..++. +|||++.+...+.       
T Consensus        64 y~~~~~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           64 LKLVEPLRVGDRS-VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred             eeeeeeccCCCCE-EEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence            5677899999999 99999998899999999996543222 2345567775   45555 6999885332111       


Q ss_pred             C-----------------CCceEEEEeccCCcchhhhhhh
Q psy16893         85 T-----------------TRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        85 ~-----------------~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .                 ...+|+||||++ ++|.+.+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence            1                 144899999999 789988864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.32  E-value=1.7e-12  Score=83.21  Aligned_cols=89  Identities=16%  Similarity=0.074  Sum_probs=70.5

Q ss_pred             hhhcccccccCCcceEEEEEEc-CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCC------eEeeeccCCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN------VSITQHTPYTTR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~   87 (112)
                      .+.+.+.||+|+|| .||++.+ ..+++.||+|.+..   .......+.+|+.++..++|+|      ++.+.+.+...+
T Consensus        15 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           15 RYEIVDTLGEGAFG-KVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             ceEEEEEEecCCCe-EEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            55778899999999 9999987 45788899999853   2233466788888888876654      788887777778


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .++++|||+ +++|.+.+...
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~  110 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKEN  110 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHT
T ss_pred             cEEEEEcCC-CCCHHHHHHhc
Confidence            899999999 67888888654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.32  E-value=2.8e-12  Score=85.52  Aligned_cols=84  Identities=23%  Similarity=0.104  Sum_probs=66.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||.+. ..+++.||+|.+...     ....+.+|+.++..+ +||||+.+.+.+...+.+|++||
T Consensus        17 ~~~~~~LG~G~~g-~V~~~~-~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           17 VVSEKILGYGSSG-TVVFQG-SFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             EEEEEEEEECSTT-CEEEEE-ESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             eeccCeEeeCCCe-EEEEEE-EECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            3556789999999 886544 346889999988532     234567899999876 79999999888888888999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+. ++|.+.+..
T Consensus        90 ~~~-gsL~~~l~~  101 (434)
T 2rio_A           90 LCN-LNLQDLVES  101 (434)
T ss_dssp             CCS-EEHHHHHHT
T ss_pred             cCC-CCHHHHHhc
Confidence            996 588888764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.32  E-value=3.9e-12  Score=84.51  Aligned_cols=83  Identities=19%  Similarity=0.039  Sum_probs=63.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+....      ....+|+.+++.++|+||+.+.+.+..      ...
T Consensus        55 ~y~~~~~lG~G~fg-~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           55 SYTDTKVIGNGSFG-VVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             eEEeeeEEeeCCCE-EEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            45677899999999 99999998899999999985321      112369999999999999987665421      234


Q ss_pred             eEEEEeccCCcchhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRW  105 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~  105 (112)
                      ++++|||+++ ++.+.+
T Consensus       128 ~~lv~e~~~~-~l~~~~  143 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVA  143 (420)
T ss_dssp             EEEEEECCCE-EHHHHH
T ss_pred             EEeehhcccc-cHHHHH
Confidence            6799999987 454443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.31  E-value=1.4e-12  Score=84.57  Aligned_cols=81  Identities=17%  Similarity=0.113  Sum_probs=53.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-------CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-------TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------~~   87 (112)
                      .+.+.+.||+|+|| .||++.+..++..||+|.+....   .......+++..+..++||||+.+.+.+..       ..
T Consensus        24 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           24 RFQVERMAGQGTFG-TVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             TEEEC-----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred             ceEEEEEEecCCCe-EEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence            45677899999999 99999999899999999885322   222345667778888899999987776533       22


Q ss_pred             ceEEEEeccCCc
Q psy16893         88 RMYPGLTLRLGE   99 (112)
Q Consensus        88 ~~~lv~e~~~~~   99 (112)
                      .++++|||+.++
T Consensus       100 ~~~lv~e~~~~~  111 (360)
T 3e3p_A          100 YLNVVMEYVPDT  111 (360)
T ss_dssp             EEEEEEECCSCB
T ss_pred             eEEEEeeccccc
Confidence            378999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.30  E-value=1.4e-12  Score=83.68  Aligned_cols=92  Identities=16%  Similarity=-0.075  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCC--CCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFK--HDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.......    .....+.+|+.+++.+.  |+|++.+.+.+...+.
T Consensus        44 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           44 QYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TEEEEEECSSSSSC-EEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             ceEEEEEEeeCCCe-EEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            45677899999999 99999998899999999986432111    11234567888999886  5999999988888888


Q ss_pred             eEEEEeccCC-cchhhhhhh
Q psy16893         89 MYPGLTLRLG-EVHVRRWTK  107 (112)
Q Consensus        89 ~~lv~e~~~~-~~l~~~~~~  107 (112)
                      .++++|++.+ ++|.+++..
T Consensus       123 ~~lv~e~~~~~~~L~~~l~~  142 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFITE  142 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHHH
T ss_pred             EEEEEEcCCCCccHHHHHhc
Confidence            9999999986 788887754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.29  E-value=2.6e-12  Score=81.14  Aligned_cols=88  Identities=15%  Similarity=-0.025  Sum_probs=69.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec-cCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH-TPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....    ...+.+|+.++..+.|++++.... .....+..+++|
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A           10 RYRLGRKIGSGSFG-DIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             EEEEEEEEccCCCe-EEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            45677899999999 999999988999999998853221    235778999999999888774333 334567789999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+ +++|.+.+...
T Consensus        85 e~~-~~~L~~~~~~~   98 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFC   98 (296)
T ss_dssp             ECC-CCBHHHHHHHT
T ss_pred             Eec-CCCHHHHHHhh
Confidence            999 78898888643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.28  E-value=1.9e-12  Score=83.80  Aligned_cols=91  Identities=9%  Similarity=-0.047  Sum_probs=63.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCC---CCCeEEEEEcccccCCh---------hhHHHHHHHHHHHhhCCCCCeEeeecc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR---DGRRVALKKLPNVFQSL---------VSSKRVFRELKMLCFFKHDNVSITQHT   82 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~---~~~~va~k~i~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~~~~~   82 (112)
                      .+.+.+.||+|+|| .||++.+..   ++..+|+|.+.......         .....+.+|+..+..+.|+||+.+.+.
T Consensus        38 ~y~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           38 QWVLGKKIGSGGFG-LIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             EEEEEEEC-------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             eEEEEeeEeecCCe-EEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            35677899999999 999999876   67889999885332110         011235678888999999999988776


Q ss_pred             CCC----CCceEEEEeccCCcchhhhhhh
Q psy16893         83 PYT----TRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        83 ~~~----~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      +..    ...+|++|||+ +++|.+.+..
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  144 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ  144 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBG
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHh
Confidence            554    67799999999 8899888764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.28  E-value=1.7e-12  Score=86.60  Aligned_cols=86  Identities=19%  Similarity=0.054  Sum_probs=65.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .|+... ..+++.||+|.+.....     ....+|+.+++.+ +||||+.+.+.+.....+|++||
T Consensus        26 y~~~~~LG~G~~G-~V~~~~-~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           26 FCPKDVLGHGAEG-TIVYRG-MFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEECGGG-CEEEEE-ESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EecCCeeecCcCE-EEEEEE-EeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            3566789999999 754333 34688999999853211     1245799999999 69999999888888888999999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      |+.+ +|.+.+....
T Consensus        99 ~~~g-~L~~~l~~~~  112 (432)
T 3p23_A           99 LCAA-TLQEYVEQKD  112 (432)
T ss_dssp             CCSE-EHHHHHHSSS
T ss_pred             CCCC-CHHHHHHhcC
Confidence            9975 8888886543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.28  E-value=3.7e-12  Score=80.38  Aligned_cols=87  Identities=15%  Similarity=-0.018  Sum_probs=66.9

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec-cCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH-TPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+....    ....+.+|+.++..+.|++++.... .....+..+++|
T Consensus        10 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A           10 RYRLGRKIGSGSFG-DIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             -CEEEEEEEECSSS-EEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ceEEeeeecCCCCe-EEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            45677899999999 99999998899999999864321    1234677999999999888774443 335577789999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+ +++|.+.+..
T Consensus        85 e~~-~~~L~~~~~~   97 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF   97 (296)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             Ecc-CCCHHHHHHH
Confidence            999 7889888764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.27  E-value=4.3e-12  Score=82.53  Aligned_cols=88  Identities=15%  Similarity=0.095  Sum_probs=70.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-----------CCCeEeeeccC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-----------HDNVSITQHTP   83 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~   83 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..   .......+.+|+.++..+.           |+||+.+.+.+
T Consensus        20 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           20 RYILVRKLGWGHFS-TVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             eEEEEEeeeecCCe-EEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            55778899999999 999999988999999999853   2233456778888888776           78999877765


Q ss_pred             CCC----CceEEEEeccCCcchhhhhhh
Q psy16893         84 YTT----RRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        84 ~~~----~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ...    ..++++||++ +++|.+.+..
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~  122 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKK  122 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHH
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHH
Confidence            542    2689999999 7889888765

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.27  E-value=7.4e-12  Score=85.68  Aligned_cols=86  Identities=12%  Similarity=-0.018  Sum_probs=57.0

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC-h-----hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS-L-----VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~-~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      ..+.||+|+|| .||++..  .+..+++|........ .     ...+++.+|+.+++.++||||+.+.......+..|+
T Consensus       340 ~~~~LG~G~fg-~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          340 PEHLIGKGAEA-DIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             --------CCE-EEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCEEeeCCCE-EEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            34589999999 9999843  4677899876422111 1     113457899999999999999944333334455799


Q ss_pred             EEeccCCcchhhhhh
Q psy16893         92 GLTLRLGEVHVRRWT  106 (112)
Q Consensus        92 v~e~~~~~~l~~~~~  106 (112)
                      +|||+++++|.+++.
T Consensus       417 VmE~~~ggsL~~~l~  431 (540)
T 3en9_A          417 MMSYINGKLAKDVIE  431 (540)
T ss_dssp             EEECCCSEEHHHHST
T ss_pred             EEECCCCCCHHHHHH
Confidence            999999999988775

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.26  E-value=1.5e-12  Score=84.44  Aligned_cols=85  Identities=8%  Similarity=-0.083  Sum_probs=65.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCC--------CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEee-------
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR--------DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSIT-------   79 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~--------~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-------   79 (112)
                      .+.+.+.||+|+|| .||++.+..        .++.||+|.+...       ..+.+|+.++..++|||++.+       
T Consensus        43 ~y~~~~~lg~G~~g-~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~  114 (352)
T 2jii_A           43 QWKLKSFQTRDNQG-ILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST  114 (352)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred             eEEEEEEecCCCCe-EEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence            45677899999999 999999876        3788999998532       356789999999999999852       


Q ss_pred             --------eccCC-CCCceEEEEeccCCcchhhhhhhc
Q psy16893         80 --------QHTPY-TTRRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        80 --------~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                              .+.+. .....|+||||+ +++|.+.+...
T Consensus       115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A          115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred             CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence                    22222 257789999999 89999988653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.26  E-value=3.3e-12  Score=83.20  Aligned_cols=92  Identities=8%  Similarity=-0.066  Sum_probs=65.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCC-----CCeEEEEEcccccCChh---------hHHHHHHHHHHHhhCCCCCeEeee
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRD-----GRRVALKKLPNVFQSLV---------SSKRVFRELKMLCFFKHDNVSITQ   80 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~-----~~~va~k~i~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~   80 (112)
                      .+.+.+.||+|+|| .||++.+..+     ++.||+|.+........         .......|+..+..+.|+||+.+.
T Consensus        36 ~y~~~~~lG~G~~g-~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           36 AWKVGLPIGQGGFG-CIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             EEEEEEECCCC-CC-EEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             eEEEEEEEecCCCe-EEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            45677899999999 9999987654     57799999853211000         012234566677888999999887


Q ss_pred             ccCCCC----CceEEEEeccCCcchhhhhhhc
Q psy16893         81 HTPYTT----RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        81 ~~~~~~----~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+...    ...|++|||+ +++|.+.+...
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~  145 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN  145 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc
Confidence            765442    4589999999 88999888654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.25  E-value=1.1e-11  Score=81.29  Aligned_cols=89  Identities=13%  Similarity=0.056  Sum_probs=69.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCC-----eEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDN-----VSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~n-----iv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+...   ......+..|+.++..+. |+|     ++.+.+.+...+.
T Consensus        55 ~y~~~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           55 RYEIDSLIGKGSFG-QVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eEEEEEEEeecCCE-EEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            44677899999999 9999999889999999998532   233455677888887775 554     7777777777788


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +|+||||+.+ +|.+.+...
T Consensus       131 ~~lv~e~~~~-~L~~~l~~~  149 (382)
T 2vx3_A          131 LCLVFEMLSY-NLYDLLRNT  149 (382)
T ss_dssp             EEEEEECCCC-BHHHHHHHT
T ss_pred             eEEEEecCCC-CHHHHHhhc
Confidence            9999999976 788888654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.24  E-value=1.1e-11  Score=79.92  Aligned_cols=89  Identities=16%  Similarity=0.063  Sum_probs=68.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCC------eEeeeccCCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN------VSITQHTPYTTR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~   87 (112)
                      .+.+.+.||+|+|| .||++.+..++ ..||+|.+..   .......+.+|+.+++.+.|++      ++.+...+...+
T Consensus        20 ~y~~~~~lg~G~~g-~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           20 RYEIVGNLGEGTFG-KVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cEEEEEEeeccCCe-EEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            45777899999999 99999987766 6899999853   2234466778998888887655      666777667778


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .++++|||+. +++++.+...
T Consensus        96 ~~~lv~e~~~-~~l~~~l~~~  115 (355)
T 2eu9_A           96 HMCIAFELLG-KNTFEFLKEN  115 (355)
T ss_dssp             EEEEEEECCC-CBHHHHHHHT
T ss_pred             eEEEEEeccC-CChHHHHHhc
Confidence            8999999995 5677776543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.22  E-value=1.5e-11  Score=83.18  Aligned_cols=87  Identities=11%  Similarity=-0.013  Sum_probs=67.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE-eeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.....    ...+..|+.++..+.|++.+ .+..+....+..+++|
T Consensus         8 ~y~i~~~LG~G~fG-~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            8 KFRLGRKIGSGSFG-EIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TEECCCCCEECSSC-EEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEeeCCCE-EEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            45777899999999 999999988999999998753221    13467899999999875544 5555555577789999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+ +++|.+.+..
T Consensus        83 e~~-g~sL~~ll~~   95 (483)
T 3sv0_A           83 DLL-GPSLEDLFNF   95 (483)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             ECC-CCCHHHHHHh
Confidence            999 7889888764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.19  E-value=2e-11  Score=80.46  Aligned_cols=78  Identities=22%  Similarity=0.079  Sum_probs=59.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC------CCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT------TRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~   88 (112)
                      .|.+.+.||+|+|| .||++.+..++. +|+|++.....      ...+|+.+++.++||||+.+.+++..      ...
T Consensus        41 ~Y~~~~~lG~G~~g-~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           41 AYTNCKVIGNGSFG-VVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             eEEEeEEEeeCCCe-EEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            45677899999999 999999876665 88887743211      12369999999999999987776532      334


Q ss_pred             eEEEEeccCCcc
Q psy16893         89 MYPGLTLRLGEV  100 (112)
Q Consensus        89 ~~lv~e~~~~~~  100 (112)
                      +++||||++++.
T Consensus       113 ~~lv~e~~~~~l  124 (394)
T 4e7w_A          113 LNLVLEYVPETV  124 (394)
T ss_dssp             EEEEEECCSEEH
T ss_pred             EEEEeeccCccH
Confidence            789999999753

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.17  E-value=3e-11  Score=83.14  Aligned_cols=85  Identities=8%  Similarity=-0.136  Sum_probs=59.9

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCC--------hhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEEE
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS--------LVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.|..+ ....+.....++.+++|.+......        ....+.+.+|+.+|+++ .|+||+.+.+++++.+.+|||
T Consensus       242 ~~~~~~~-~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          242 PYAGAGL-AHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             -C---------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             cccCCcc-cccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            3444444 4444443445788999998643111        12235689999999999 599999999999999999999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||++|++|.+++..
T Consensus       321 MEyv~G~~L~d~i~~  335 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA  335 (569)
T ss_dssp             EECCCSEEHHHHHHT
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999999964

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.14  E-value=7.5e-11  Score=74.79  Aligned_cols=80  Identities=10%  Similarity=-0.089  Sum_probs=58.7

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----------------hhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----------------VSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----------------~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      +.+.||+|+|| .||++.+ .+++.||+|.++......                .....+.+|+.+++.++|   +.+..
T Consensus        94 ~~~~iG~G~~g-~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~  168 (282)
T 1zar_A           94 IGKLMGEGKES-AVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPK  168 (282)
T ss_dssp             EEEEEEECSSE-EEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCC
T ss_pred             ecCEeccCCCc-eEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCe
Confidence            34789999999 9999998 788999999985321110                124568899999999984   43333


Q ss_pred             cCCCCCceEEEEeccCCcchhh
Q psy16893         82 TPYTTRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        82 ~~~~~~~~~lv~e~~~~~~l~~  103 (112)
                      .+. .+..|+||||++|++|.+
T Consensus       169 ~~~-~~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          169 VYA-WEGNAVLMELIDAKELYR  189 (282)
T ss_dssp             EEE-EETTEEEEECCCCEEGGG
T ss_pred             EEe-ccceEEEEEecCCCcHHH
Confidence            222 245699999999999887

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.69  E-value=5.7e-09  Score=65.25  Aligned_cols=78  Identities=15%  Similarity=-0.018  Sum_probs=52.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCe--EEEEEcccccCCh----------------------hhHHHHHHHHHHHhhCC
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRR--VALKKLPNVFQSL----------------------VSSKRVFRELKMLCFFK   72 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~--va~k~i~~~~~~~----------------------~~~~~~~~e~~~l~~l~   72 (112)
                      .+.+.||+|+|| .||++.+..+++.  ||+|.++......                      .....+.+|+.++..+.
T Consensus        50 ~i~~~ig~G~~g-~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           50 AMGGVISTGKEA-NVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEECSSE-EEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceE-EEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            355789999999 9999987667888  9999864321000                      11235788999999988


Q ss_pred             CCCeEeeeccCCCCCceEEEEeccC
Q psy16893         73 HDNVSITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        73 h~niv~~~~~~~~~~~~~lv~e~~~   97 (112)
                      |+++.......  ....+|||||+.
T Consensus       129 ~~~i~~p~~~~--~~~~~lVmE~~g  151 (258)
T 1zth_A          129 EAGVSVPQPYT--YMKNVLLMEFIG  151 (258)
T ss_dssp             HTTCCCCCEEE--EETTEEEEECCE
T ss_pred             hCCCCCCeEEE--cCCCEEEEEecC
Confidence            77653221111  134589999994

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.49  E-value=3.4e-07  Score=60.70  Aligned_cols=56  Identities=13%  Similarity=0.048  Sum_probs=43.6

Q ss_pred             hcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCC
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKH   73 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h   73 (112)
                      .+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.++..+.|
T Consensus        81 ~~~~~LG~G~fG-~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           81 VRGTVLGQEDPY-AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEETTE-EEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             EEecccccCCCE-EEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            456789999999 999999999999999998863221 12224678899999998887

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.45  E-value=1.6e-07  Score=62.16  Aligned_cols=84  Identities=12%  Similarity=0.064  Sum_probs=49.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC------------ChhhHHH--------HHHHHHHHhhCCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ------------SLVSSKR--------VFRELKMLCFFKHDN   75 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~------------~~~~~~~--------~~~e~~~l~~l~h~n   75 (112)
                      +.+...||.|++| .||.+.+. +|+.||+|.++....            .......        ...|...|.++.+.+
T Consensus        97 Y~I~~~IG~Gk~a-~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKES-DIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SEEEEEEEECSSE-EEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCEeeeCCce-EEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3466789999999 99999874 688999998742100            0000111        234555555554443


Q ss_pred             eEeeeccCCCCCceEEEEeccCCcchhh
Q psy16893         76 VSITQHTPYTTRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        76 iv~~~~~~~~~~~~~lv~e~~~~~~l~~  103 (112)
                      +........  ..-+|||||++|.++.+
T Consensus       175 v~vp~p~~~--~~~~LVME~i~G~~L~~  200 (397)
T 4gyi_A          175 FPVPEPIAQ--SRHTIVMSLVDALPMRQ  200 (397)
T ss_dssp             CSCCCEEEE--ETTEEEEECCSCEEGGG
T ss_pred             CCCCeeeec--cCceEEEEecCCccHhh
Confidence            322111111  11279999999887654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.87  E-value=3.4e-05  Score=47.85  Aligned_cols=85  Identities=13%  Similarity=0.056  Sum_probs=57.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      +.+...++.++.+ .||+....  +..+++|.......  .....+.+|+.+++.+. +.++..+.......+..|++||
T Consensus        16 ~~~~~~~~g~s~~-~v~~~~~~--~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           16 YRCVKDTEGMSPA-KVYKLVGE--NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             SEEEECCSCCSSS-EEEEEECS--SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             ceeEeeccCCCCC-eEEEEECC--CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            3455566777777 89987743  57899998753211  11234778888888775 4444455554455667899999


Q ss_pred             ccCCcchhhhh
Q psy16893         95 LRLGEVHVRRW  105 (112)
Q Consensus        95 ~~~~~~l~~~~  105 (112)
                      |++|.++.+.+
T Consensus        91 ~i~G~~l~~~~  101 (263)
T 3tm0_A           91 EADGVLCSEEY  101 (263)
T ss_dssp             CCSSEEHHHHC
T ss_pred             ecCCeehhhcc
Confidence            99999887653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.31  E-value=0.0004  Score=42.62  Aligned_cols=74  Identities=12%  Similarity=-0.025  Sum_probs=48.6

Q ss_pred             ccc-cCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCe-E-eeeccCCCCCceEEEEeccC
Q psy16893         21 EVG-LLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV-S-ITQHTPYTTRRMYPGLTLRL   97 (112)
Q Consensus        21 ~lg-~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v-~~~~~~~~~~~~~lv~e~~~   97 (112)
                      .++ .|..+ .+|+... .++..+++|.....     ....+.+|+.+++.+.+.++ + .+.......+..+++|||++
T Consensus        26 ~~~~gg~~~-~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           26 QQTIGCSDA-AVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             ECSCTTSSC-EEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             ecccCCCCc-eEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            344 45556 8998764 45667999986432     11345678888887764454 3 34444444556899999999


Q ss_pred             Ccch
Q psy16893         98 GEVH  101 (112)
Q Consensus        98 ~~~l  101 (112)
                      |.++
T Consensus        99 G~~l  102 (264)
T 1nd4_A           99 GQDL  102 (264)
T ss_dssp             SEET
T ss_pred             Cccc
Confidence            9877

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.95  E-value=0.0051  Score=38.07  Aligned_cols=79  Identities=11%  Similarity=0.032  Sum_probs=51.0

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEeccCCcc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLRLGEV  100 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~  100 (112)
                      +..|.-+..+|+......+..+.+|.-+.     .....+.+|..+|+.+. +-.+..+...+.+.+..|++||+++|.+
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            44455543688877666677789997532     23456778888888775 2222234444445567799999999987


Q ss_pred             hhhhh
Q psy16893        101 HVRRW  105 (112)
Q Consensus       101 l~~~~  105 (112)
                      +.+.+
T Consensus       107 ~~~~~  111 (272)
T 4gkh_A          107 AFQVL  111 (272)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            65543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.66  E-value=0.0043  Score=40.16  Aligned_cols=80  Identities=14%  Similarity=0.099  Sum_probs=48.3

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcc--cccCChhhHHHHHHHHHHHhhCCCCC--eEeeeccCCCC---CceEE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLP--NVFQSLVSSKRVFRELKMLCFFKHDN--VSITQHTPYTT---RRMYP   91 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~--~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~---~~~~l   91 (112)
                      .+.++.|.++ .+|+....  +..+++|..+  ... .......+.+|..+++.+...+  +..+...+.+.   +..|+
T Consensus        43 ~~~l~~G~sn-~~y~v~~~--~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~  118 (359)
T 3dxp_A           43 VEQFKGGQSN-PTFKLVTP--GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY  118 (359)
T ss_dssp             EEECCC-CCS-CEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred             EEEcCCcccc-eEEEEEEC--CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence            3467888888 89987654  4578888764  211 1112345778999888887433  33444433332   45799


Q ss_pred             EEeccCCcchh
Q psy16893         92 GLTLRLGEVHV  102 (112)
Q Consensus        92 v~e~~~~~~l~  102 (112)
                      ||||++|..+.
T Consensus       119 vme~v~G~~l~  129 (359)
T 3dxp_A          119 IMEFVSGRVLW  129 (359)
T ss_dssp             EEECCCCBCCC
T ss_pred             EEEecCCeecC
Confidence            99999987764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.81  E-value=0.0091  Score=39.20  Aligned_cols=81  Identities=12%  Similarity=-0.030  Sum_probs=45.7

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccC--C---hhhHHHHHHHHHHHhhCCC--CCeE-eeeccCCCCCceE
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ--S---LVSSKRVFRELKMLCFFKH--DNVS-ITQHTPYTTRRMY   90 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~--~---~~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~   90 (112)
                      .+.+|.|..+ .+|++.....+..+++|.......  .   .....+...|.+++..+..  +..+ .+...  +.+..+
T Consensus        35 ~~~lg~G~~n-~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           35 CQEIGDGNLN-YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEECCSSSSE-EEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEECCCCceE-EEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            3468899998 999986555567899997642110  0   0112345678887776632  2222 22222  223358


Q ss_pred             EEEeccCCcchh
Q psy16893         91 PGLTLRLGEVHV  102 (112)
Q Consensus        91 lv~e~~~~~~l~  102 (112)
                      +|||++++....
T Consensus       112 lvmE~l~g~~~~  123 (397)
T 2olc_A          112 TVMEDLSHLKIA  123 (397)
T ss_dssp             EEECCCTTSEEH
T ss_pred             EEEEeCCCcchH
Confidence            999999875443

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.57  E-value=0.061  Score=34.55  Aligned_cols=74  Identities=11%  Similarity=0.002  Sum_probs=48.0

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-C--CCeEeeeccCCCCCceEEEEecc
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-H--DNVSITQHTPYTTRRMYPGLTLR   96 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~lv~e~~   96 (112)
                      +.++.|... .+|+...  .+..+++|....     .....+.+|.+.|+.+. +  ..+..+.......+..|++|||+
T Consensus        42 ~~l~gG~~n-~~y~v~~--~~~~~vlK~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           42 EKLYSGEMN-EIWLIND--EVQTVFVKINER-----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEECCSSSS-EEEEEES--SSCEEEEEEEEG-----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             EEeCCccce-eeeEEEE--CCCeEEEEeCCc-----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            357888887 8888764  356788887542     12455677888777664 2  22334433333345679999999


Q ss_pred             CCcch
Q psy16893         97 LGEVH  101 (112)
Q Consensus        97 ~~~~l  101 (112)
                      ++..+
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            98754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.53  E-value=0.4  Score=30.37  Aligned_cols=74  Identities=11%  Similarity=0.024  Sum_probs=46.9

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC-Ce--EeeeccC-CCCCceEEEEec
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD-NV--SITQHTP-YTTRRMYPGLTL   95 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~-ni--v~~~~~~-~~~~~~~lv~e~   95 (112)
                      +.++.|... .+|..     +..+++|.-.    .......+.+|.++|..+.+. .+  ..+.... ...+..|++|++
T Consensus        25 ~~l~~G~~n-~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           25 ESLGEGFRN-YAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEECSSE-EEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eecCCCcce-eEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence            356777776 78875     4558888642    123346788999999988742 21  1222222 224456899999


Q ss_pred             cCCcchhh
Q psy16893         96 RLGEVHVR  103 (112)
Q Consensus        96 ~~~~~l~~  103 (112)
                      ++|..+.+
T Consensus        95 i~G~~l~~  102 (306)
T 3tdw_A           95 VQGQILGE  102 (306)
T ss_dssp             CCSEECHH
T ss_pred             cCCeECch
Confidence            99987654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=94.42  E-value=0.0027  Score=42.98  Aligned_cols=60  Identities=8%  Similarity=-0.060  Sum_probs=13.1

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEE------EEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVAL------KKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~------k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      +.+.+|   || .||++........||+      |............+.+.++..++....|+|++....
T Consensus       146 l~~~lG---fG-~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~  211 (463)
T 3cxl_A          146 IYEHVG---YT-TLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHN  211 (463)
T ss_dssp             STTTSS---BC-CC---------CCBGGGC-----------------------------------CBCCC
T ss_pred             ccccCC---ch-hhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcc
Confidence            445666   99 9998876554456787      655322222233456788888888889999984433

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.21  E-value=0.088  Score=32.96  Aligned_cols=74  Identities=14%  Similarity=-0.033  Sum_probs=45.6

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCC-CeE--eeeccCCCCCceEEEEec
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHD-NVS--ITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~-niv--~~~~~~~~~~~~~lv~e~   95 (112)
                      ++.+|.|..+ .+|+... .+|+.+.+|.-+...  ......+.+|++.|+.+... .+.  .....  .  .-+++|||
T Consensus        20 v~~~g~G~~~-~vyrv~l-~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~   91 (288)
T 3f7w_A           20 VAERGHSHRW-HLYRVEL-ADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW   91 (288)
T ss_dssp             EEEEEEETTE-EEEEEEE-TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred             EEecCCCCCe-EEEEEEE-CCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence            3467888888 9998764 467889999764321  11123466788888777522 222  22221  1  23789999


Q ss_pred             cCCcc
Q psy16893         96 RLGEV  100 (112)
Q Consensus        96 ~~~~~  100 (112)
                      +.++.
T Consensus        92 l~~~~   96 (288)
T 3f7w_A           92 VDERP   96 (288)
T ss_dssp             CCCCC
T ss_pred             ecccC
Confidence            98764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=92.90  E-value=0.23  Score=31.27  Aligned_cols=74  Identities=16%  Similarity=0.143  Sum_probs=46.0

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeE--eeeccCCCC---CceEEEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVS--ITQHTPYTT---RRMYPGL   93 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv--~~~~~~~~~---~~~~lv~   93 (112)
                      +.++.|... .+|...     ..+++|....    ......+.+|.++++.+. +..+.  .+.......   ...|+||
T Consensus        26 ~~~~~G~~n-~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           26 EISGEGNDC-IAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CEEEECSSE-EEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             EecCCCCcc-eEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            357788887 888642     4588887532    233467888999988774 33332  222222121   2348899


Q ss_pred             eccCCcchhh
Q psy16893         94 TLRLGEVHVR  103 (112)
Q Consensus        94 e~~~~~~l~~  103 (112)
                      ++++|.++.+
T Consensus        96 ~~i~G~~l~~  105 (304)
T 3sg8_A           96 TKIKGVPLTP  105 (304)
T ss_dssp             ECCCCEECCH
T ss_pred             cccCCeECCc
Confidence            9999988764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=85.95  E-value=1.6  Score=27.60  Aligned_cols=72  Identities=10%  Similarity=0.008  Sum_probs=36.0

Q ss_pred             ccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-----CCCeEeee-c-cC-CCCCceEEE
Q psy16893         21 EVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-----HDNVSITQ-H-TP-YTTRRMYPG   92 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~-~-~~-~~~~~~~lv   92 (112)
                      .++.|..+ .+|+....  +..+++|....   ..   ..+..|..++..+.     -|.++... + .+ ...+..+++
T Consensus        39 ~l~gG~~n-~~~~v~~~--~~~~vlk~~~~---~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l  109 (346)
T 2q83_A           39 VIQGNQMA-LVWKVHTD--SGAVCLKRIHR---PE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV  109 (346)
T ss_dssp             ECC----C-EEEEEEET--TEEEEEEEECS---CH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred             eccccccC-cEEEEEeC--CCCEEEEecCC---CH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence            45456666 88887653  33588998753   11   22233444444332     23333211 1 11 124567899


Q ss_pred             EeccCCcch
Q psy16893         93 LTLRLGEVH  101 (112)
Q Consensus        93 ~e~~~~~~l  101 (112)
                      ++|++|.++
T Consensus       110 ~~~i~G~~~  118 (346)
T 2q83_A          110 YDWIEGRPF  118 (346)
T ss_dssp             EECCCCBCC
T ss_pred             EEeecCccC
Confidence            999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	112
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-05
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-05
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.001
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.001
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	0.001
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.001
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.002
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.002
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.002
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.002
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.003
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.003

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 2e-07
 Identities = 24/48 (50%), Positives = 33/48 (68%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           SV A  D + G RVA+KKL   FQS++ +KR +REL++L   KH+NV
Sbjct: 32 GSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-06
 Identities = 21/48 (43%), Positives = 32/48 (66%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           +V +  D R G +VA+KKL   FQS + +KR +REL++L   +H+NV
Sbjct: 32 GAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 79

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.9 bits (98), Expect = 3e-06
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 29  SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV------SITQH 81
            +V    D R+   VA+KK+  +  QS    + + +E++ L   +H N        + +H
Sbjct: 29  GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88

Query: 82  TPYTTRRMYPGLTLRLGEVHVRRWTKDQ 109
           T +       G    L EVH +   + +
Sbjct: 89  TAWLVMEYCLGSASDLLEVHKKPLQEVE 116

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 1e-05
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR 88
            V    +   G  VALKK+    ++        RE+ +L    H N+       +T  +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75

Query: 89 MY 90
          +Y
Sbjct: 76 LY 77

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-05
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V A  D    R VA+KKL   FQ+   +KR +REL ++    H N+
Sbjct: 31 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 3e-05
 Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 1/84 (1%)

Query: 29  SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR 88
            +V    +      VALK++              RE+ +L   KH N+ +  H    + +
Sbjct: 16  GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-VRLHDVLHSDK 74

Query: 89  MYPGLTLRLGEVHVRRWTKDQGPH 112
               +     +   + +    G  
Sbjct: 75  KLTLVFEFCDQDLKKYFDSCNGDL 98

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V      + G++VALKK+    +         RE+K+L   KH+NV
Sbjct: 24 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.9 bits (90), Expect = 4e-05
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V  VT+   G   A K +    +S    + V +E++ +   +H  +
Sbjct: 40 GVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTL 85

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 6e-05
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           +V    D   G+ VA++++    Q     + +  E+ ++   K+ N+
Sbjct: 34 GTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNI 79

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.2 bits (88), Expect = 6e-05
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S V    D R  R VA+K L  ++ +      R  RE +      H  +
Sbjct: 21 SEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 69

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 7e-05
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V +  D  +  RVA+KK+ + F+     +R  RE+K+L  F+H+N+
Sbjct: 22 GMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 68

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 38.1 bits (88), Expect = 7e-05
 Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 2/48 (4%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    +   GR    K +       +    V  E+ ++    H  +
Sbjct: 43 GVVHRCVEKATGRVFVAKFINT--PYPLDKYTVKNEISIMNQLHHPKL 88

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 8e-05
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
             + +    DG+ +  K+L     +    + +  E+ +L   KH N+
Sbjct: 18 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR 87
            V  V +   GR  A+K L   V  +         E ++L   +H  ++  ++   T  
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78

Query: 88 RMY 90
          R+ 
Sbjct: 79 RLC 81

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V  +    +GR  A+K L   +   L   +    E  ML    H  +
Sbjct: 18 GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 66

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVF----QSLVSSKRVFRELKMLCFFKHDNV 76
          + VK   +   G + A K +        +  VS + + RE+ +L   +H NV
Sbjct: 24 AVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 1e-04
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSS---KRVFRELKMLCFFKHDNV 76
          ++V    D    + VA+KK+    +S       +   RE+K+L    H N+
Sbjct: 12 ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 62

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 2e-04
 Identities = 8/48 (16%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V+   +      VA+K + ++ +++   + + +E+ +     H+NV
Sbjct: 19 GEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLNHENV 65

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V  V+    G  +A K + ++        ++ REL++L       +
Sbjct: 20 GVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.6 bits (81), Expect = 5e-04
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    +   G   ALKK+    +         RE+ +L   KH N+
Sbjct: 16 GVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.4 bits (81), Expect = 6e-04
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S V    D R  + VA+K +            +  E+ +L   KH N+
Sbjct: 23 SEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNI 69

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 8e-04
 Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 2/48 (4%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    +       A K +    +  +  +    E+ +L    H N+
Sbjct: 26 GKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNI 71

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDN 75
           +V    D      VA  +L +   +    +R   E +ML   +H N
Sbjct: 23 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 69

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 3/48 (6%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V      +    VA+K L    +  +  +   +E  ++   KH N+
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNL 75

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 3/48 (6%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V    +    +    K +            V +E+ +L   +H N+
Sbjct: 19 GIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHRNI 63

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.001
 Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV 76
           +V    + +    +ALK L     +      ++ RE+++    +H N+
Sbjct: 20 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 68

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (77), Expect = 0.002
 Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 1/64 (1%)

Query: 29  SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTR 87
             V  V     G   A+K L       L   +    E ++L       +   + +     
Sbjct: 55  GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114

Query: 88  RMYP 91
            +Y 
Sbjct: 115 NLYM 118

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            +  + VA+K L N          +  E  ++    +  +
Sbjct: 30 MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (76), Expect = 0.002
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 31  VKAVTDPRDGRRVALKKLP--NVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRR 88
           V+ ++    G+  A+K L    + Q   +++    E ++L   +     +T H  + T  
Sbjct: 43  VRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102

Query: 89  MY 90
             
Sbjct: 103 KL 104

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 33.7 bits (76), Expect = 0.002
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 19/94 (20%)

Query: 29  SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLC-FFKHDNV--------SIT 79
           S V    +  +  +V +K L  V +     K++ RE+K+L       N+           
Sbjct: 49  SEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGGPNIITLADIVKDPV 103

Query: 80  QHTPYTTRRMYPGLTL-----RLGEVHVRRWTKD 108
             TP                  L +  +R +  +
Sbjct: 104 SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYE 137

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (76), Expect = 0.003
 Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 1/49 (2%)

Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNV 76
          S+V    +    R  A+K L             V RE  ++    H   
Sbjct: 22 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
            V        G  VA+KK+          +   REL+++    H N+
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCNI 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	112
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.84
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.84
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.84
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.83
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.83
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.83
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.83
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.82
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.82
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.81
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.81
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.81
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.81
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.8
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.8
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.8
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.78
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.78
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.78
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.77
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.77
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.76
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.76
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.76
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.75
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.75
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.73
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.73
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.73
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.72
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.72
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.72
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.71
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.71
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.71
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.71
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.7
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.7
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.7
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.69
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.69
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.69
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.69
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.68
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.67
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.66
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.66
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.65
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.64
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.64
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.62
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.62
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.61
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.59
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.58
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.56
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.49
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.47
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.09
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.85
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	94.49
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.39
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.05

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.8e-21  Score=120.88  Aligned_cols=102  Identities=14%  Similarity=0.009  Sum_probs=83.9

Q ss_pred             CCCCCCCCCCccch---hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE
Q psy16893          1 MASGKTFSRPSDEI---GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS   77 (112)
Q Consensus         1 ~~~~~~~~~~~~~~---~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv   77 (112)
                      |.+.+|. .+.|++   .+.+.+.||+|+|| .||++.+..+++.||+|.+....   ...+.+.+|+.+|+.++|||||
T Consensus         2 ~~p~~p~-~~~wei~~~~~~~~~~iG~G~fg-~Vy~a~~~~~~~~vAvK~i~~~~---~~~~~~~~E~~il~~l~HpnIv   76 (287)
T d1opja_           2 MDPSSPN-YDKWEMERTDITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLV   76 (287)
T ss_dssp             CCTTSTT-CCTTBCCGGGEEEEEETTTTTTS-SEEEEEEGGGTEEEEEEECCTTC---SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             cCCCCCC-CcccEecHHHeEEeeEEeeCCCe-EEEEEEECCCCeEEEEEEECCcc---chHHHHHHHHHHHHhCCCCCEe
Confidence            4444443 345665   34677899999999 99999998889999999986432   2346789999999999999999


Q ss_pred             eeeccCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         78 ITQHTPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        78 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+.+.+.+.+.+|++|||+++|++.+.+..
T Consensus        77 ~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~  106 (287)
T d1opja_          77 QLLGVCTREPPFYIITEFMTYGNLLDYLRE  106 (287)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             cCCccEeeCCeeEEEeecccCcchHHHhhh
Confidence            999988888889999999999999998864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.2e-21  Score=120.44  Aligned_cols=94  Identities=19%  Similarity=0.085  Sum_probs=80.4

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC----hhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS----LVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      ..|.+.+.||+|+|| .||++.+..+++.||+|.+......    ....+.+.+|+.+|+.++|||||.+.+++.+.+.+
T Consensus        10 d~Y~~~~~lG~G~fg-~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_          10 DYYDTGEELGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GTEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCEEEeEEEecCCCe-EEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            346788899999999 9999999999999999998643211    12356789999999999999999999999998999


Q ss_pred             EEEEeccCCcchhhhhhhc
Q psy16893         90 YPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~  108 (112)
                      |+||||+++|+|.+.+...
T Consensus        89 ~iv~E~~~gg~L~~~i~~~  107 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK  107 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH
T ss_pred             EEEEEcCCCccccchhccc
Confidence            9999999999999988653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.6e-21  Score=118.81  Aligned_cols=92  Identities=16%  Similarity=0.116  Sum_probs=77.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC--CCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT--TRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   92 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+++.++|||||.+.+.+.+  .+.+|+|
T Consensus         5 dy~~~~~iG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           5 DYEVLYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hCEEeEEEecCCCe-EEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            46677899999999 99999999999999999997554444556778999999999999999998886643  5678999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+.+..
T Consensus        84 mEy~~~g~L~~~i~~   98 (269)
T d2java1          84 MEYCEGGDLASVITK   98 (269)
T ss_dssp             EECCTTEEHHHHHHH
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999988753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.83  E-value=9.9e-21  Score=121.82  Aligned_cols=93  Identities=15%  Similarity=0.160  Sum_probs=80.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...  .....+.+.+|+.+|+.++|||||.+.+.+.+.+.+|+|||
T Consensus        27 ~Y~i~~~lG~G~fg-~Vy~~~~~~~g~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          27 HYDIHEELGTGAFG-VVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTTEEEEEEEECCC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CeEEEEEEecCcCe-EEEEEEECCCCCEEEEEEEccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            45778899999999 9999999999999999998642  23345678899999999999999999998888899999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      |+++|+|++.+....+
T Consensus       104 ~~~gg~L~~~l~~~~~  119 (350)
T d1koaa2         104 FMSGGELFEKVADEHN  119 (350)
T ss_dssp             CCCSCBHHHHHTCTTS
T ss_pred             cCCCCCHHHHHHhhcC
Confidence            9999999999865544

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.5e-21  Score=121.14  Aligned_cols=91  Identities=12%  Similarity=0.061  Sum_probs=79.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||+|.+..+++.||+|.+...   ......+.+|+.+|+.++|||||.+.+.+.+.+.+|+||||
T Consensus         7 Y~i~~~lG~G~fg-~Vy~~~~~~~~~~~AiK~i~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           7 YMIAEDLGRGEFG-IVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eEEEEEEecCCCe-EEEEEEECCCCcEEEEEEEcCC---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            5677899999999 9999999999999999999642   23345678999999999999999999988888999999999


Q ss_pred             cCCcchhhhhhhcCC
Q psy16893         96 RLGEVHVRRWTKDQG  110 (112)
Q Consensus        96 ~~~~~l~~~~~~~~~  110 (112)
                      |+|++|++++....+
T Consensus        83 ~~gg~L~~~i~~~~~   97 (321)
T d1tkia_          83 ISGLDIFERINTSAF   97 (321)
T ss_dssp             CCCCBHHHHHTSSSC
T ss_pred             CCCCcHHHHHHhcCC
Confidence            999999999976543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.83  E-value=1.1e-20  Score=121.68  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=80.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...  .......+.+|+.+|+.++|||||.+.+.+.+.+.+|+|||
T Consensus        30 ~Y~i~~~lG~G~fg-~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          30 YYDILEELGSGAFG-VVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEecCCCe-EEEEEEECCCCCEEEEEEECCc--chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788899999999 9999999999999999998643  23345678899999999999999999999888899999999


Q ss_pred             ccCCcchhhhhhhcC
Q psy16893         95 LRLGEVHVRRWTKDQ  109 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~  109 (112)
                      |+++|+|++++....
T Consensus       107 ~~~gg~L~~~~~~~~  121 (352)
T d1koba_         107 FLSGGELFDRIAAED  121 (352)
T ss_dssp             CCCCCBHHHHTTCTT
T ss_pred             cCCCChHHHHHHhcC
Confidence            999999999886544

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.6e-21  Score=119.64  Aligned_cols=92  Identities=15%  Similarity=0.067  Sum_probs=76.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+.... .....+.+.+|+.+++.++|||||.+.+.+.+.+.+|+|||
T Consensus         6 dy~~~~~lG~G~fg-~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           6 DWDLVQTLGEGAYG-EVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEecCcCe-EEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            35677899999999 99999999999999999986432 12234568899999999999999999998888899999999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++|+|++.+..+
T Consensus        84 y~~gg~L~~~l~~~   97 (271)
T d1nvra_          84 YCSGGELFDRIEPD   97 (271)
T ss_dssp             CCTTEEGGGGSBTT
T ss_pred             ccCCCcHHHHHhcC
Confidence            99999999998653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=9.2e-21  Score=119.18  Aligned_cols=93  Identities=13%  Similarity=0.028  Sum_probs=79.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+...  .....+.+.+|+.+|+.++|||||.+.+.+.+.+.+|+|||
T Consensus        13 ~Y~i~~~iG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE   89 (288)
T d2jfla1          13 FWEIIGELGDGAFG-KVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   89 (288)
T ss_dssp             TEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECS--SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CeEEeEEEeeCCCc-EEEEEEECCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence            35677889999999 9999999999999999998542  23345678899999999999999999998888889999999


Q ss_pred             ccCCcchhhhhhhcCC
Q psy16893         95 LRLGEVHVRRWTKDQG  110 (112)
Q Consensus        95 ~~~~~~l~~~~~~~~~  110 (112)
                      |+++|+|.+.+....+
T Consensus        90 y~~~g~L~~~~~~~~~  105 (288)
T d2jfla1          90 FCAGGAVDAVMLELER  105 (288)
T ss_dssp             CCTTEEHHHHHHHHTS
T ss_pred             cCCCCcHHHHHHhcCC
Confidence            9999999988765443

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.4e-20  Score=119.91  Aligned_cols=92  Identities=15%  Similarity=0.007  Sum_probs=80.0

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      ..|.+.+.||+|+|| .||++.+..+++.||+|.+.... .......+.+|+.+|+.++|||||.+.+.+.+.+.+|+||
T Consensus         6 d~y~~~~~iG~G~fg-~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           6 DDFEKISELGAGNGG-VVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGEEEEEEEECCSSC-CEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEecCCCe-EEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            356677899999999 99999999999999999986432 2334567889999999999999999999999988999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus        84 Ey~~gg~L~~~l~~   97 (322)
T d1s9ja_          84 EHMDGGSLDQVLKK   97 (322)
T ss_dssp             ECCTTEEHHHHHHH
T ss_pred             EcCCCCcHHHHHhh
Confidence            99999999998864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.6e-20  Score=116.16  Aligned_cols=92  Identities=16%  Similarity=0.013  Sum_probs=76.5

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC----CCceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT----TRRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l   91 (112)
                      +.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.+|+.++|||||.+.+.+..    ...+|+
T Consensus        11 ~~~~~~iG~G~fg-~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFK-TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCc-EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence            3566689999999 99999999999999999986544444556778999999999999999988776532    456899


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ||||+++|+|.+++...
T Consensus        90 vmE~~~~g~L~~~l~~~  106 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRF  106 (270)
T ss_dssp             EEECCCSCBHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHhcc
Confidence            99999999999988653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=1.2e-20  Score=119.57  Aligned_cols=91  Identities=19%  Similarity=0.148  Sum_probs=74.7

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+..... ......+.+|+.+|+.++|||||.+.+.+.+.+.+|+||||
T Consensus        11 Y~~~~~lG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_          11 YDFRDVLGTGAFS-EVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             EEEEEESBSGGGG-GEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeccCe-EEEEEEECCCCCEEEEEEEchHHh-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            5778899999999 999999999999999999864322 12235678999999999999999999998888999999999


Q ss_pred             cCCcchhhhhhhc
Q psy16893         96 RLGEVHVRRWTKD  108 (112)
Q Consensus        96 ~~~~~l~~~~~~~  108 (112)
                      ++||+|.+++...
T Consensus        89 ~~gg~L~~~l~~~  101 (307)
T d1a06a_          89 VSGGELFDRIVEK  101 (307)
T ss_dssp             CCSCBHHHHHHTC
T ss_pred             cCCCcHHHhhhcc
Confidence            9999999998653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4e-20  Score=116.46  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=77.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+.....  ...+.+.+|+.+++.++|||||.+.+.+...+.+|+|||
T Consensus        21 ~Y~~~~~iG~G~fg-~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          21 KYTRFEKIGQGASG-TVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TBCSCEECCCSSSC-EEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEecCcCc-EEEEEEECCCCCEEEEEEEecccC--hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence            45677899999999 999999999999999999864322  234678999999999999999999998888889999999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|+|.+.+..
T Consensus        98 y~~gg~L~~~~~~  110 (293)
T d1yhwa1          98 YLAGGSLTDVVTE  110 (293)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             ecCCCcHHHHhhc
Confidence            9999999887654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.9e-20  Score=117.69  Aligned_cols=92  Identities=17%  Similarity=0.101  Sum_probs=78.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.++++++||||+.+.+.+.+.+.+|+||
T Consensus         9 dy~i~~~lG~G~fg-~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           9 DFKFGKILGEGSFS-TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            46788899999999 999999999999999999864321 1223467889999999999999999999888888999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus        88 Ey~~gg~L~~~~~~  101 (288)
T d1uu3a_          88 SYAKNGELLKYIRK  101 (288)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             EccCCCCHHHhhhc
Confidence            99999999988764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.5e-20  Score=115.87  Aligned_cols=92  Identities=16%  Similarity=0.067  Sum_probs=78.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .......+.+|+.+++.++|||||.+.+.+.+.+.+|+||
T Consensus         7 dy~i~~~iG~G~fg-~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           7 DFEIGRPLGKGKFG-NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HeEEEEEEecCCCc-EEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            45677899999999 999999999999999999853321 1123466889999999999999999999998988999999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+++|+|.+.+..
T Consensus        86 Ey~~~g~L~~~l~~   99 (263)
T d2j4za1          86 EYAPLGTVYRELQK   99 (263)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             eecCCCcHHHHHhh
Confidence            99999999998864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.4e-19  Score=114.28  Aligned_cols=93  Identities=14%  Similarity=0.072  Sum_probs=75.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCC---eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGR---RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~---~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      +.+.+.||+|+|| .||++.+..+++   .||+|.+... ......+.+.+|+.+|+.++|||||.+.+++...+.+|+|
T Consensus        28 ~~~~~~lG~G~fg-~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          28 VKIEQVIGAGEFG-EVCSGHLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             EEEEEEEEECSSS-EEEEEEECC---CCEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cEEeeEEeeCCCe-EEEEEEEeCCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            3566789999999 999998876654   5889988532 2344457799999999999999999999998888889999


Q ss_pred             EeccCCcchhhhhhhcCC
Q psy16893         93 LTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~~  110 (112)
                      |||+++|+|.+.+....+
T Consensus       106 ~Ey~~~g~L~~~~~~~~~  123 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDG  123 (299)
T ss_dssp             EECCTTEEHHHHHHTTTT
T ss_pred             EEecCCCcceeeeccccC
Confidence            999999999988776544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=8.7e-20  Score=115.66  Aligned_cols=91  Identities=18%  Similarity=0.101  Sum_probs=76.2

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+...+.||+|+|| .||++.+..+++.||+|.+....... ...+.+.+|+.+|+.++|||||.+.+++.+.+.+|+||
T Consensus        16 ~y~~l~~lG~G~fg-~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          16 LFSDLREIGHGSFG-AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HEEEEEEEEECSSS-EEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hcEeeEEEecCCCe-EEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35666789999999 99999999999999999986443222 33467899999999999999999999888888999999


Q ss_pred             eccCCcchhhhhh
Q psy16893         94 TLRLGEVHVRRWT  106 (112)
Q Consensus        94 e~~~~~~l~~~~~  106 (112)
                      |||.+|++...+.
T Consensus        95 E~~~~g~l~~~~~  107 (309)
T d1u5ra_          95 EYCLGSASDLLEV  107 (309)
T ss_dssp             ECCSEEHHHHHHH
T ss_pred             EecCCCchHHHHH
Confidence            9999998765544

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.1e-19  Score=113.26  Aligned_cols=97  Identities=13%  Similarity=0.039  Sum_probs=78.9

Q ss_pred             CCCCCCccchh---hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893          5 KTFSRPSDEIG---TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus         5 ~~~~~~~~~~~---~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      +|+..+.|++.   +.+.+.||+|+|| .||++... ++..||+|.+....   ...+.+.+|+.++++++|||||.+.+
T Consensus         1 ~p~~~~~wei~~~~~~~~~~iG~G~fg-~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g   75 (272)
T d1qpca_           1 KPWWEDEWEVPRETLKLVERLGAGQFG-EVWMGYYN-GHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYA   75 (272)
T ss_dssp             CCTTTCTTBCCGGGEEEEEEEEEETTE-EEEEEEET-TTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCCCCCCeecCHHHeEEeEEEecCCCc-EEEEEEEC-CCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeEEEe
Confidence            57778888873   3677899999999 99999865 56789999986432   23467899999999999999999988


Q ss_pred             cCCCCCceEEEEeccCCcchhhhhhh
Q psy16893         82 TPYTTRRMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        82 ~~~~~~~~~lv~e~~~~~~l~~~~~~  107 (112)
                      ++.+ +.+|+||||+++|+|.+.+..
T Consensus        76 ~~~~-~~~~iv~Ey~~~g~L~~~~~~  100 (272)
T d1qpca_          76 VVTQ-EPIYIITEYMENGSLVDFLKT  100 (272)
T ss_dssp             EECS-SSCEEEEECCTTCBHHHHTTS
T ss_pred             eecc-CCeEEEEEeCCCCcHHHHHhh
Confidence            7655 457999999999999887654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.3e-19  Score=116.06  Aligned_cols=93  Identities=15%  Similarity=0.064  Sum_probs=79.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.+... .......+.+|+.+|+.++||||+.+...+.+.+.+|+||
T Consensus         6 dy~~~~~lG~G~fg-~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           6 DFDYLKLLGKGTFG-KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcEEEEEEecCcCe-EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            46777899999999 999999999999999999964321 1223466889999999999999999999999999999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+++|+|.+.+...
T Consensus        85 ey~~gg~L~~~~~~~   99 (337)
T d1o6la_          85 EYANGGELFFHLSRE   99 (337)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             eccCCCchhhhhhcc
Confidence            999999999988654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=1.3e-19  Score=115.09  Aligned_cols=93  Identities=17%  Similarity=0.118  Sum_probs=79.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.+++.++|||||.+.+.+.+.+.+|+||
T Consensus         5 dy~i~~~lG~G~fg-~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           5 DFQILRTLGTGSFG-RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HeEEEEEEecCcCc-EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            46677899999999 999999999999999999864321 1223467889999999999999999999998889999999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+.||++.+.+...
T Consensus        84 E~~~gg~l~~~~~~~   98 (316)
T d1fota_          84 DYIEGGELFSLLRKS   98 (316)
T ss_dssp             CCCCSCBHHHHHHHT
T ss_pred             eecCCcccccccccc
Confidence            999999988877654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.78  E-value=2.3e-19  Score=112.23  Aligned_cols=91  Identities=13%  Similarity=0.023  Sum_probs=77.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh-------hhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL-------VSSKRVFRELKMLCFFK-HDNVSITQHTPYTTR   87 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~-------~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~   87 (112)
                      |.+.+.||+|+|| .||++.+..+++.+|+|.+.......       .....+.+|+.+++.++ ||||+.+.+.+.+.+
T Consensus         5 y~~~~~iG~G~~g-~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           5 YEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CEEceEEecCcCe-EEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            4667899999999 99999999899999999986432211       11245789999999997 999999999999999


Q ss_pred             ceEEEEeccCCcchhhhhhh
Q psy16893         88 RMYPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~  107 (112)
                      .+|+||||+++|+|.+.++.
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~  103 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTE  103 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHH
T ss_pred             ceEEEEEcCCCchHHHHHHh
Confidence            99999999999999999865

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.4e-19  Score=110.81  Aligned_cols=90  Identities=13%  Similarity=-0.027  Sum_probs=73.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++...   ..||+|.++.........+.+.+|+.++.+++|||||.+.+++.. +.+++||||
T Consensus        10 ~~~~~~lG~G~fg-~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey   84 (276)
T d1uwha_          10 ITVGQRIGSGSFG-TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQW   84 (276)
T ss_dssp             CCCCSEEEECSSC-EEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEEEEEEeeCCCc-EEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEec
Confidence            4677899999999 99999754   359999996544444556789999999999999999988886654 458999999


Q ss_pred             cCCcchhhhhhhcCC
Q psy16893         96 RLGEVHVRRWTKDQG  110 (112)
Q Consensus        96 ~~~~~l~~~~~~~~~  110 (112)
                      +++|+|.+.+....+
T Consensus        85 ~~~g~L~~~l~~~~~   99 (276)
T d1uwha_          85 CEGSSLYHHLHIIET   99 (276)
T ss_dssp             CCEEEHHHHHHTSCC
T ss_pred             CCCCCHHHHHhhccC
Confidence            999999999865544

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.7e-19  Score=110.44  Aligned_cols=89  Identities=10%  Similarity=0.016  Sum_probs=75.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++... ++..||+|.+....   ...+.+.+|+.+++.++|||||.+.+++...+.+|+||||
T Consensus         7 ~~~~~~iG~G~fg-~Vy~~~~~-~~~~vAvK~i~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           7 LTFVQEIGSGQFG-LVHLGYWL-NKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             EEEEEEEECCSSC-CEEEEEET-TTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cEEEEEEeeCCCe-EEEEEEEC-CCCEEEEEEECCCc---CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            4567889999999 99999875 56679999996432   2346789999999999999999999998888889999999


Q ss_pred             cCCcchhhhhhhcC
Q psy16893         96 RLGEVHVRRWTKDQ  109 (112)
Q Consensus        96 ~~~~~l~~~~~~~~  109 (112)
                      +++|+|.+.+....
T Consensus        82 ~~~g~L~~~l~~~~   95 (263)
T d1sm2a_          82 MEHGCLSDYLRTQR   95 (263)
T ss_dssp             CTTCBHHHHHHTTT
T ss_pred             cCCCcHHHHhhccc
Confidence            99999999886543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.5e-19  Score=109.46  Aligned_cols=89  Identities=13%  Similarity=0.050  Sum_probs=75.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +.+.+.||+|+|| .||++..+ ++..||+|.++...   .....+.+|+.++.+++||||+.+.+.+.+.+.+++||||
T Consensus         6 ~~~~~~iG~G~fg-~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           6 LTFLKELGTGQFG-VVKYGKWR-GQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCEETTE-EEEEEEET-TTEEEEEEEEESSS---SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             CEEeEEEecCCCe-EEEEEEEC-CCCEEEEEEECcCc---CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence            4567899999999 99999974 67789999986432   2346789999999999999999999988888889999999


Q ss_pred             cCCcchhhhhhhcC
Q psy16893         96 RLGEVHVRRWTKDQ  109 (112)
Q Consensus        96 ~~~~~l~~~~~~~~  109 (112)
                      +++|++.+.+....
T Consensus        81 ~~~g~l~~~~~~~~   94 (258)
T d1k2pa_          81 MANGCLLNYLREMR   94 (258)
T ss_dssp             CTTEEHHHHHHSGG
T ss_pred             cCCCcHHHhhhccc
Confidence            99999988875543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.4e-19  Score=110.13  Aligned_cols=86  Identities=12%  Similarity=-0.002  Sum_probs=68.1

Q ss_pred             ccccCCcceEEEEEEc--CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEeccCC
Q psy16893         21 EVGLLSICSSVKAVTD--PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTLRLG   98 (112)
Q Consensus        21 ~lg~g~~g~~v~~~~~--~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   98 (112)
                      .||+|+|| .||++..  ..+++.||+|.+..........+.+.+|+.+|++++|||||.+.+++.. +..|+||||+++
T Consensus        14 ~iG~G~fG-~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          14 ELGSGNFG-TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEECSSE-EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CcccCCCe-EEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            69999999 9999964  3456789999996543334445679999999999999999999887755 457999999999


Q ss_pred             cchhhhhhhc
Q psy16893         99 EVHVRRWTKD  108 (112)
Q Consensus        99 ~~l~~~~~~~  108 (112)
                      |+|.+.+...
T Consensus        92 g~L~~~l~~~  101 (277)
T d1xbba_          92 GPLNKYLQQN  101 (277)
T ss_dssp             EEHHHHHHHC
T ss_pred             CcHHHHHhhc
Confidence            9999888653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.76  E-value=4.9e-19  Score=110.51  Aligned_cols=92  Identities=17%  Similarity=0.069  Sum_probs=75.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC----CCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYT----TRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~   90 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+..... .....+.+.+|+.+++.++||||+.+.+.+..    ...+|
T Consensus         9 Y~i~~~lG~G~fg-~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_           9 YELGEILGFGGMS-EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             eEEeEEEeeCCCe-EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence            5677899999999 999999999999999999965432 23345678999999999999999987776543    23489


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      +||||++|++|.+++...
T Consensus        88 lvmE~~~g~~L~~~~~~~  105 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTE  105 (277)
T ss_dssp             EEEECCCEEEHHHHHHHH
T ss_pred             EEEECCCCCEehhhhccc
Confidence            999999999998877543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.6e-19  Score=111.25  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=72.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+..........+.+.+|+.++++++|||||.+.+.+.+.+.+|+|||
T Consensus         3 ~Y~~~~~lG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           3 NFQKVEKIGEGTYG-VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCEeccEEecCcCe-EEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            45667899999999 99999999999999999996443333335678899999999999999999999988899999999


Q ss_pred             ccCCcchhhhh
Q psy16893         95 LRLGEVHVRRW  105 (112)
Q Consensus        95 ~~~~~~l~~~~  105 (112)
                      |+.++. ++.+
T Consensus        82 ~~~~~~-~~~~   91 (298)
T d1gz8a_          82 FLHQDL-KKFM   91 (298)
T ss_dssp             CCSEEH-HHHH
T ss_pred             ecCCch-hhhh
Confidence            998764 4444

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.7e-18  Score=108.58  Aligned_cols=91  Identities=13%  Similarity=0.098  Sum_probs=71.8

Q ss_pred             hccc-ccccCCcceEEEEEEcCC--CCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         17 MMHD-EVGLLSICSSVKAVTDPR--DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        17 ~~~~-~lg~g~~g~~v~~~~~~~--~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+ .||+|+|| .||++.+..  ++..||+|.+... ......+.+.+|+.+|.+++|||||.+.+++.. +.+|+||
T Consensus        11 ~~~~~~iG~G~fg-~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvm   87 (285)
T d1u59a_          11 LIADIELGCGNFG-SVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM   87 (285)
T ss_dssp             EEEEEEEECCTTE-EEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             EECCcEEecccCe-EEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEE
Confidence            4455 49999999 999997643  3457999998643 234456789999999999999999999887755 4589999


Q ss_pred             eccCCcchhhhhhhcCC
Q psy16893         94 TLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        94 e~~~~~~l~~~~~~~~~  110 (112)
                      ||+++|+|.+.+...++
T Consensus        88 E~~~~g~L~~~l~~~~~  104 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKRE  104 (285)
T ss_dssp             ECCTTEEHHHHHTTCTT
T ss_pred             EeCCCCcHHHHhhcccc
Confidence            99999999998765443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7e-19  Score=111.91  Aligned_cols=92  Identities=14%  Similarity=0.051  Sum_probs=75.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC-ChhhHHHHHHHHHHHh-hCCCCCeEeeeccCCCCCceEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ-SLVSSKRVFRELKMLC-FFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~-~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.+.+.||+|+|| .||++.+..+++.||+|.+.+... .....+.+..|..++. .++|||||.+.+.+.+.+.+|+|
T Consensus         3 dy~i~~~iG~G~fg-~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           3 DFILHKMLGKGSFG-KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TEEEEEEEEECSSS-EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CeEEeeEEecCCCc-EEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            35677899999999 999999999999999999964321 1123455667777654 68999999999999998999999


Q ss_pred             EeccCCcchhhhhhh
Q psy16893         93 LTLRLGEVHVRRWTK  107 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~  107 (112)
                      |||+++|+|.+++..
T Consensus        82 mEy~~~g~L~~~i~~   96 (320)
T d1xjda_          82 MEYLNGGDLMYHIQS   96 (320)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EeecCCCcHHHHhhc
Confidence            999999999998865

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=109.56  Aligned_cols=87  Identities=18%  Similarity=0.104  Sum_probs=69.4

Q ss_pred             ccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh---hhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL---VSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      +++||+|+|| .||++.+..+++.||+|.+.......   ...+.+.+|+.+++.++|||||.+.+.+...+.+|+||||
T Consensus         3 l~~lG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           3 LDFLGEGQFA-TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEETTE-EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             ceEeccCcCe-EEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4689999999 99999999999999999996432111   1134688999999999999999999999988889999999


Q ss_pred             cCCcchhhhhh
Q psy16893         96 RLGEVHVRRWT  106 (112)
Q Consensus        96 ~~~~~l~~~~~  106 (112)
                      +.++++.....
T Consensus        82 ~~~~~~~~~~~   92 (299)
T d1ua2a_          82 METDLEVIIKD   92 (299)
T ss_dssp             CSEEHHHHHTT
T ss_pred             hcchHHhhhhh
Confidence            99887655443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=4e-18  Score=109.54  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=78.6

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEccccc-CChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVF-QSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   93 (112)
                      .+.+++.||+|+|| .||++.+..+++.||+|.+.... ......+.+.+|+.+|+.++|||||.+.+.+.....+|++|
T Consensus        42 ~y~i~~~lG~G~fg-~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          42 QFDRIKTLGTGSFG-RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CeEEEEEeecCcCc-EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            46777899999999 99999999999999999985332 11223467889999999999999999999888888899999


Q ss_pred             eccCCcchhhhhhh
Q psy16893         94 TLRLGEVHVRRWTK  107 (112)
Q Consensus        94 e~~~~~~l~~~~~~  107 (112)
                      ||+.+|++++.+..
T Consensus       121 e~~~~g~l~~~l~~  134 (350)
T d1rdqe_         121 EYVAGGEMFSHLRR  134 (350)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             ccccccchhhhHhh
Confidence            99999999988864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.73  E-value=4.7e-18  Score=109.72  Aligned_cols=92  Identities=13%  Similarity=-0.029  Sum_probs=73.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccC----ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQ----SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+.....    ..........++.+++.++|||||.+.+.+...+.+|
T Consensus         5 dy~i~~~lG~G~fg-~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           5 DFSVHRIIGRGGFG-EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             hCeeeeEEecCCCe-EEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            45677899999999 999999999999999999853211    1111122234567788888999999999888888999


Q ss_pred             EEEeccCCcchhhhhhh
Q psy16893         91 PGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~  107 (112)
                      +||||+++|+|.+++..
T Consensus        84 ivmE~~~gg~L~~~l~~  100 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQ  100 (364)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHh
Confidence            99999999999998865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.7e-18  Score=107.82  Aligned_cols=92  Identities=15%  Similarity=0.079  Sum_probs=73.3

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCC-----eEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGR-----RVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~-----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   89 (112)
                      +.+.+.||+|+|| .||++....+++     .||+|.+.... .......+.+|+.++.++ +|||||.+.+.+...+.+
T Consensus        39 ~~l~~~lG~G~fG-~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          39 LEFGKVLGSGAFG-KVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             EEEEEEEEECSSE-EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEEeeEEeeCCCe-EEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            3677899999999 999998654433     58999885332 233346788999999988 799999999999888889


Q ss_pred             EEEEeccCCcchhhhhhhcC
Q psy16893         90 YPGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~~~  109 (112)
                      |+||||+++|+|.+.+++.+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~  136 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKR  136 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTT
T ss_pred             EEEEEcCCCCcHHHHHHhcc
Confidence            99999999999999997654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=104.66  Aligned_cols=91  Identities=13%  Similarity=0.042  Sum_probs=78.1

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||+|.+..+++.||+|.+............+.+|+.+++.++||||+.+...+......++++++
T Consensus         4 y~~i~~LG~G~fg-~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           4 YEKLEKIGEGTYG-TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             EEEEEEEEECSSS-EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CEeeeEEecCcCe-EEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            4566899999999 999999999999999999865444444567889999999999999999999999888899999999


Q ss_pred             cCCcchhhhhhh
Q psy16893         96 RLGEVHVRRWTK  107 (112)
Q Consensus        96 ~~~~~l~~~~~~  107 (112)
                      +.++.+...+..
T Consensus        83 ~~~~~l~~~~~~   94 (292)
T d1unla_          83 CDQDLKKYFDSC   94 (292)
T ss_dssp             CSEEHHHHHHHT
T ss_pred             cccccccccccc
Confidence            999887766543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4e-18  Score=105.75  Aligned_cols=86  Identities=14%  Similarity=0.099  Sum_probs=69.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   94 (112)
                      +.+.+.||+|+|| .||++...  +..||+|.+...    ...+.+.+|+.++++++||||+.+.+.+.+ .+.+|+|||
T Consensus         9 ~~~~~~lG~G~fg-~Vy~~~~~--~~~vAvK~i~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           9 LKLLQTIGKGEFG-DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             EEEEEEEEECSSC-EEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             eEEeEEEecCCCe-EEEEEEEC--CeEEEEEEECcH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            4577889999999 99999874  678999999532    234678899999999999999999887644 567899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++|+|.+.+..+
T Consensus        82 y~~~g~L~~~l~~~   95 (262)
T d1byga_          82 YMAKGSLVDYLRSR   95 (262)
T ss_dssp             CCTTEEHHHHHHHH
T ss_pred             ccCCCCHHHHHHhc
Confidence            99999999988643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=107.56  Aligned_cols=88  Identities=24%  Similarity=0.223  Sum_probs=70.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC------CCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY------TTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------~~~~~   89 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+...........++.+|+.+++.++||||+.+.+.+.      ....+
T Consensus        19 Y~i~~~LG~G~fg-~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~   97 (355)
T d2b1pa1          19 YQNLKPIGSGAQG-IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV   97 (355)
T ss_dssp             EEEEEECSCC--C-EEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             eEEEEEeecCcCe-EEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence            5677899999999 9999999999999999999765544555677899999999999999998777653      34678


Q ss_pred             EEEEeccCCcchhhhh
Q psy16893         90 YPGLTLRLGEVHVRRW  105 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~  105 (112)
                      |++|||+.+++ ++.+
T Consensus        98 ~iv~Ey~~~~l-~~~~  112 (355)
T d2b1pa1          98 YLVMELMDANL-CQVI  112 (355)
T ss_dssp             EEEEECCSEEH-HHHH
T ss_pred             EEEEeccchHH-HHhh
Confidence            99999998764 4444

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.8e-17  Score=103.65  Aligned_cols=92  Identities=13%  Similarity=0.016  Sum_probs=73.9

Q ss_pred             hcccccccCCcceEEEEEEcCCCC----CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDPRDG----RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG   92 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~~~~----~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   92 (112)
                      .+.++||+|+|| .||++....++    ..||+|.+... ........+.+|+.++++++|||||.+.+++...+.++++
T Consensus        10 ~~~~~iG~G~fG-~Vy~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_          10 TRQKVIGAGEFG-EVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             EEEEEEEECSSS-EEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             EeeeEEeeCCCe-EEEEEEEeCCCCEEEEEEEEEEECcc-cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            456789999999 99999765443    46999998533 2334456788999999999999999999988888889999


Q ss_pred             EeccCCcchhhhhhhcCC
Q psy16893         93 LTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        93 ~e~~~~~~l~~~~~~~~~  110 (112)
                      |||+.++++.+.+....+
T Consensus        88 ~e~~~~~~l~~~~~~~~~  105 (283)
T d1mqba_          88 TEYMENGALDKFLREKDG  105 (283)
T ss_dssp             EECCTTEEHHHHHHHTTT
T ss_pred             EEecccCcchhhhhcccc
Confidence            999999998887765443

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.2e-17  Score=105.69  Aligned_cols=90  Identities=27%  Similarity=0.242  Sum_probs=66.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC------Cc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT------RR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~   88 (112)
                      .|.+++.||+|+|| .||+|.+..+++.||+|.+..........+.+.+|+.+|+.++|||+|.+.+.+...      ..
T Consensus        19 ~Y~~i~~lG~G~fg-~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          19 VYRDLQPVGSGAYG-AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             SEEEEEEC-------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             cEEEEEEEecCCCe-EEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence            34677899999999 999999999999999999975544455567889999999999999999887766543      35


Q ss_pred             eEEEEeccCCcchhhhhh
Q psy16893         89 MYPGLTLRLGEVHVRRWT  106 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~  106 (112)
                      +|++|||+. .++.+.++
T Consensus        98 ~~lv~e~~~-~~l~~~~~  114 (346)
T d1cm8a_          98 FYLVMPFMG-TDLGKLMK  114 (346)
T ss_dssp             CEEEEECCS-EEHHHHHH
T ss_pred             EEEEEeccc-ccHHHHHH
Confidence            799999994 45555444

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.2e-17  Score=102.01  Aligned_cols=93  Identities=12%  Similarity=-0.040  Sum_probs=73.8

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC---CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~---~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++   ..||+|.+... ......+.+.+|+.+++.++|||||.+.+.+.+ +.+|+
T Consensus         8 ~~~l~~~iG~G~fg-~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~i   84 (273)
T d1mp8a_           8 RIELGRCIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI   84 (273)
T ss_dssp             GEEEEEEEEECSSS-EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEE
T ss_pred             HeEEEEEEeeCCCc-EEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEE
Confidence            45678899999999 99999875443   45889988532 233445678999999999999999999887754 56899


Q ss_pred             EEeccCCcchhhhhhhcCC
Q psy16893         92 GLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~~  110 (112)
                      ||||+++|++.+.+....+
T Consensus        85 v~E~~~~g~l~~~~~~~~~  103 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKY  103 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTT
T ss_pred             EEEeccCCcHHhhhhccCC
Confidence            9999999999988765544

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2e-17  Score=103.70  Aligned_cols=87  Identities=14%  Similarity=0.048  Sum_probs=71.3

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEe
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   94 (112)
                      .+.+.+.||+|+|| .||++....+ ..||+|.+....   ...+.+.+|+.++++++|||||.+.+.+.. +.+|+|||
T Consensus        18 ~~~i~~~iG~G~fg-~Vy~~~~~~~-~~vAiK~l~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E   91 (285)
T d1fmka3          18 SLRLEVKLGQGCFG-EVWMGTWNGT-TRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE   91 (285)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEETTT-EEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             HEEEeeEEeeCCCe-EEEEEEECCC-CEEEEEEECccc---CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence            44777899999999 9999987644 569999996432   234678999999999999999999887754 45799999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+++|++.+.+..
T Consensus        92 y~~~g~l~~~~~~  104 (285)
T d1fmka3          92 YMSKGSLLDFLKG  104 (285)
T ss_dssp             CCTTCBHHHHHSH
T ss_pred             ecCCCchhhhhhh
Confidence            9999998877754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.4e-18  Score=106.90  Aligned_cols=91  Identities=18%  Similarity=0.166  Sum_probs=72.7

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC--eEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR--RVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~--~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.+.||+|+|| .||++.+..++.  .||+|.+.... .....+.+.+|+.+|.++ +|||||.+.+.+...+.+|+
T Consensus        11 ~~~~~~~iG~G~fg-~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_          11 DIKFQDVIGEGNFG-QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GCEEEEEEECGGGC-EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HcEEEEEEeeCCCc-EEEEEEECCCCeEEEEEEEEECccc-ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            44667899999999 999998877765  47788774322 223346789999999998 69999999998888888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ||||+++|+|.+.+..
T Consensus        89 V~ey~~~g~L~~~l~~  104 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRK  104 (309)
T ss_dssp             EECCCTTCBHHHHHHT
T ss_pred             EEEecCCCcHHHHHhh
Confidence            9999999999998864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.1e-17  Score=103.22  Aligned_cols=92  Identities=15%  Similarity=0.069  Sum_probs=75.8

Q ss_pred             hhhcccccccCCcceEEEEEEc-----CCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD-----PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~-----~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~   88 (112)
                      .+.+.+.||+|+|| .||++..     ..++..||+|.+... ........+.+|+.++.++ +|||||.+.+.+...+.
T Consensus        24 ~~~l~~~iG~G~fg-~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          24 RLSFGKTLGAGAFG-KVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HeEEeeEEeecCCe-EEEEEEEeccccCCCCeEEEEEEECcc-cCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            33677899999999 9999964     345668999999643 2344456788999999998 59999999999988888


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++|||+++|+|.++++..
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEEcCCCCCHHHHHHhc
Confidence            99999999999999988653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=8.9e-18  Score=107.35  Aligned_cols=86  Identities=14%  Similarity=0.073  Sum_probs=69.2

Q ss_pred             hhhcc-cccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhh-CCCCCeEeeeccCCC----CCc
Q psy16893         15 GTMMH-DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF-FKHDNVSITQHTPYT----TRR   88 (112)
Q Consensus        15 ~~~~~-~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~   88 (112)
                      .|.+. +.||+|+|| .||+|.+..+++.||+|.+..       .....+|+.++.+ .+|||||.+.+.+.+    ...
T Consensus        12 ~y~i~~~~lG~G~fg-~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          12 DYKVTSQVLGLGING-KVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             TEEEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             CEEEeeEEeeeccCe-EEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence            45444 579999999 999999999999999999852       1346679987654 579999988776543    466


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +|+|||||+||+|++++...
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~  103 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDR  103 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSC
T ss_pred             EEEEEECCCCCcHHHHHHhc
Confidence            89999999999999998753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.9e-17  Score=105.12  Aligned_cols=92  Identities=30%  Similarity=0.255  Sum_probs=72.9

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-----CCceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-----TRRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~   90 (112)
                      |.+.+.||+|+|| .||+|.+..+++.||+|.+..........+.+.+|+.+|+.++|||+|.+...+..     ....+
T Consensus        20 Y~i~~~LG~G~fg-~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          20 YQNLSPVGSGAYG-SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             EEEEEECGGGTTS-SEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEEEEecCCCe-EEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            5677899999999 99999999999999999997554445556778999999999999999977665432     22235


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++++.+++|.+.+..+
T Consensus        99 ~i~~~~~gg~L~~~~~~~  116 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKCQ  116 (348)
T ss_dssp             EEEEECCSEEHHHHHTTC
T ss_pred             EEEEeecCCchhhhcccc
Confidence            556677889998877543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.69  E-value=1.6e-17  Score=103.95  Aligned_cols=88  Identities=17%  Similarity=0.063  Sum_probs=72.8

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEEEEec
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPGLTL   95 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   95 (112)
                      |.+.+.||+|+|| .||+|.+. +++.||+|.+..........+.+.+|+.+|++++||||+.+...+...+..++++|+
T Consensus         4 Y~~~~~iG~G~fg-~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           4 YHGLEKIGEGTYG-VVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             EEEEEEEEEETTE-EEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ceeccEEecCCCc-EEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4567899999999 99999875 778999999965433333357788999999999999999999988888889999999


Q ss_pred             cCCcchhhhh
Q psy16893         96 RLGEVHVRRW  105 (112)
Q Consensus        96 ~~~~~l~~~~  105 (112)
                      +.++.+....
T Consensus        82 ~~~~~~~~~~   91 (286)
T d1ob3a_          82 LDQDLKKLLD   91 (286)
T ss_dssp             CSEEHHHHHH
T ss_pred             ehhhhHHHHH
Confidence            9887655443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.3e-17  Score=102.62  Aligned_cols=89  Identities=16%  Similarity=0.048  Sum_probs=73.8

Q ss_pred             hcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         17 MMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        17 ~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      .+.+.||+|+|| .||++...     .++..||+|.+... ........+.+|+.++++++||||+.+.+.+...+.+++
T Consensus        23 ~l~~~lG~G~fG-~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  100 (308)
T d1p4oa_          23 TMSRELGQGSFG-MVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV  100 (308)
T ss_dssp             EEEEEEEECSSS-EEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred             EEeeEEeeCCCe-EEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeE
Confidence            677889999999 99998764     23467999999643 233445678999999999999999999998888888999


Q ss_pred             EEeccCCcchhhhhhh
Q psy16893         92 GLTLRLGEVHVRRWTK  107 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~  107 (112)
                      ||||+++|+|.+.+..
T Consensus       101 v~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_         101 IMELMTRGDLKSYLRS  116 (308)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEeecCCCCHHHHHHh
Confidence            9999999999887754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=7.4e-17  Score=101.60  Aligned_cols=91  Identities=14%  Similarity=-0.005  Sum_probs=76.1

Q ss_pred             hhhcccccccCCcceEEEEEEcC-----CCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCce
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDP-----RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRM   89 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~-----~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   89 (112)
                      .+.+.+.||+|+|| .||++...     .++..||+|.+... ......+.+.+|+.++++++|||++.+.+.+...+.+
T Consensus        14 ~~~~~~~lG~G~fG-~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          14 NIEYVRDIGEGAFG-RVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GCEEEEEEEECSSC-EEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HcEEeEEEeeCCCe-EEEEEEECCCccCCCCeEEEEEEEChh-cChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            34677899999999 99999753     34578999998643 3334456789999999999999999999988888889


Q ss_pred             EEEEeccCCcchhhhhhh
Q psy16893         90 YPGLTLRLGEVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~~~l~~~~~~  107 (112)
                      +++|||+++|+|.+++..
T Consensus        92 ~~v~e~~~~g~L~~~l~~  109 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRS  109 (301)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEEecCCCcHHHHHHh
Confidence            999999999999998864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.1e-17  Score=101.71  Aligned_cols=88  Identities=14%  Similarity=-0.005  Sum_probs=70.2

Q ss_pred             ccccccCCcceEEEEEEcCCCC---CeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-CCceEEEEe
Q psy16893         19 HDEVGLLSICSSVKAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-TRRMYPGLT   94 (112)
Q Consensus        19 ~~~lg~g~~g~~v~~~~~~~~~---~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   94 (112)
                      .++||+|+|| .||++....++   ..||+|.+... ......+++.+|+.+|++++||||+.+.+++.. ....++|||
T Consensus        32 ~~~iG~G~fg-~Vyk~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          32 NEVIGRGHFG-CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEETTE-EEEEEEECC----CEEEEEEEECCC-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ceEEeecCCe-EEEEEEEECCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            4579999999 99999865443   35899998632 334456789999999999999999999887654 567899999


Q ss_pred             ccCCcchhhhhhhc
Q psy16893         95 LRLGEVHVRRWTKD  108 (112)
Q Consensus        95 ~~~~~~l~~~~~~~  108 (112)
                      |+++++|.+.+...
T Consensus       110 ~~~~g~l~~~~~~~  123 (311)
T d1r0pa_         110 YMKHGDLRNFIRNE  123 (311)
T ss_dssp             CCTTCBHHHHHHCT
T ss_pred             EeecCchhhhhccc
Confidence            99999998877644

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1e-16  Score=101.42  Aligned_cols=90  Identities=20%  Similarity=0.146  Sum_probs=68.9

Q ss_pred             chhhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCC-------
Q psy16893         13 EIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT-------   85 (112)
Q Consensus        13 ~~~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------   85 (112)
                      ...|.+++.||+|+|| .||+|.+..+++.||+|.+............+.+|+.+|++++|+|++.+...+..       
T Consensus         9 ~~rY~i~~~LG~G~fg-~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1           9 VSKYEKLAKIGQGTFG-EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             GGGEEEEEEEEECSSS-EEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred             cCCEEEEEEEecCcCe-EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence            3466888999999999 99999999999999999986543333345678899999999999999976554322       


Q ss_pred             -CCceEEEEeccCCcchhh
Q psy16893         86 -TRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        86 -~~~~~lv~e~~~~~~l~~  103 (112)
                       ...+|++|||+.++.+..
T Consensus        88 ~~~~~~iv~e~~~~~~~~~  106 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGL  106 (318)
T ss_dssp             ---CEEEEEECCCEEHHHH
T ss_pred             cCceEEEEEeccCCCccch
Confidence             456899999999876543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.6e-16  Score=100.73  Aligned_cols=90  Identities=21%  Similarity=0.225  Sum_probs=68.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC-----CceE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT-----RRMY   90 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~   90 (112)
                      |.+++.||+|+|| .||+|.+..+++.||+|.+... ......+.+++|+.+|+.++|||++.+...+...     ..+|
T Consensus        10 Y~~~~~LG~G~fg-~Vy~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_          10 YTNLSYIGEGAYG-MVCSAYDNVNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             EEEEEECC---CC-CEEEEEETTTCSEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             eEEEEEEeeccCe-EEEEEEECCCCcEEEEEEEehh-cChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            5677899999999 9999999999999999999643 2344456788999999999999999777655432     2345


Q ss_pred             EEEeccCCcchhhhhhhc
Q psy16893         91 PGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~  108 (112)
                      ++ +++.+++|++.+..+
T Consensus        88 l~-~~~~~g~L~~~l~~~  104 (345)
T d1pmea_          88 LV-THLMGADLYKLLKTQ  104 (345)
T ss_dssp             EE-EECCCEEHHHHHHHC
T ss_pred             EE-EeecCCchhhhhhcC
Confidence            55 556788999988654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2e-16  Score=100.29  Aligned_cols=92  Identities=14%  Similarity=0.009  Sum_probs=70.4

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCC----eEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGR----RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY   90 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~----~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~   90 (112)
                      .+.+.+.||+|+|| .||++.+..+++    .||+|.+... ......+.+.+|+.++++++|||||.+.+++.+. ..+
T Consensus        10 dy~~~~~lG~G~fG-~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~   86 (317)
T d1xkka_          10 EFKKIKVLGSGAFG-TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TEEEEEEEEECSSE-EEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred             HCEEeeEEecCCCe-EEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Cee
Confidence            35677899999999 999998877765    4888887532 2233456789999999999999999998887664 468


Q ss_pred             EEEeccCCcchhhhhhhcC
Q psy16893         91 PGLTLRLGEVHVRRWTKDQ  109 (112)
Q Consensus        91 lv~e~~~~~~l~~~~~~~~  109 (112)
                      ++++++.+++|++.+....
T Consensus        87 ~v~e~~~~~~l~~~~~~~~  105 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHK  105 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTS
T ss_pred             EEEEeccCCcccccccccc
Confidence            8899999999998876543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=6.2e-17  Score=100.83  Aligned_cols=93  Identities=20%  Similarity=0.090  Sum_probs=65.8

Q ss_pred             hhcccccccCCcceEEEEEEcC-CCC--CeEEEEEcccccC-ChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCCCceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDP-RDG--RRVALKKLPNVFQ-SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~-~~~--~~va~k~i~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   91 (112)
                      +.+.+.||+|+|| .||++... .++  ..||+|.+..... .....+.+.+|+.+|+.++||||+.+.+.+.+ +.+++
T Consensus        10 ~~~~~~iG~G~fg-~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~l   87 (273)
T d1u46a_          10 LRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKM   87 (273)
T ss_dssp             EEEEEECC----C-CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             eEEEEEEecCCCe-EEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchhe
Confidence            5677899999999 99999753 232  3689998864432 22335678999999999999999999988766 45789


Q ss_pred             EEeccCCcchhhhhhhcCC
Q psy16893         92 GLTLRLGEVHVRRWTKDQG  110 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~~~  110 (112)
                      ||||++++++.+.+..+.+
T Consensus        88 v~e~~~~~~l~~~~~~~~~  106 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQG  106 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGG
T ss_pred             eeeeecCcchhhhhhcccC
Confidence            9999999999988765543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.3e-16  Score=98.53  Aligned_cols=92  Identities=13%  Similarity=0.046  Sum_probs=69.1

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCC-------CeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCCC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDG-------RRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYTT   86 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~-------~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (112)
                      .+.+.+.||+|+|| .||++....++       ..||+|.+.... .......+.+|+..+.++ +|||||.+.+.+.+.
T Consensus        14 ~~~l~~~iG~G~fg-~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          14 RLVLGKPLGEGAFG-QVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GEEEEEECC------CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HeEEeeEEeecCCc-EEEEEEEcCCCcccccCceEEEEEEECccc-ChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            34667899999999 99999764433       369999986432 334456788898888887 699999999988888


Q ss_pred             CceEEEEeccCCcchhhhhhhc
Q psy16893         87 RRMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        87 ~~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      +.+++||||+.+|+|.+.+..+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~  113 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQAR  113 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTT
T ss_pred             CeEEEEEEccCCCcHHHHHHhh
Confidence            8899999999999999998754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.64  E-value=2e-16  Score=100.50  Aligned_cols=85  Identities=15%  Similarity=0.117  Sum_probs=71.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCC--CCCceEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPY--TTRRMYP   91 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--~~~~~~l   91 (112)
                      .+.+++.||+|+|| .||++.+..+++.||+|.+...     ..+.+.+|+.+|..++ ||||+.+.+.+.  ....+++
T Consensus        36 ~y~i~~~LG~G~fg-~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          36 DYQLVRKLGRGKYS-EVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             GEEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CeEEEEEEecCcCe-EEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            45778899999999 9999999999999999998532     2456788999999996 999998887664  3567999


Q ss_pred             EEeccCCcchhhhh
Q psy16893         92 GLTLRLGEVHVRRW  105 (112)
Q Consensus        92 v~e~~~~~~l~~~~  105 (112)
                      ||||+.+++|.+..
T Consensus       110 v~e~~~~~~L~~~~  123 (328)
T d3bqca1         110 VFEHVNNTDFKQLY  123 (328)
T ss_dssp             EEECCCSCBGGGTT
T ss_pred             EEeecCCCcHHHHh
Confidence            99999999876643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7.6e-17  Score=100.35  Aligned_cols=91  Identities=16%  Similarity=-0.073  Sum_probs=72.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCCh----hhHHHHHHHHHHHhhCC--CCCeEeeeccCCCCCce
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL----VSSKRVFRELKMLCFFK--HDNVSITQHTPYTTRRM   89 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~   89 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+.......    ....++.+|+.+++.++  |||||.+.+.+.+.+.+
T Consensus         6 Y~i~~~lG~G~fg-~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           6 YQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             EEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             EEEeEEEeeCCCe-EEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            5677899999999 99999999999999999986432111    11234568999999886  89999999998888899


Q ss_pred             EEEEeccCC-cchhhhhhh
Q psy16893         90 YPGLTLRLG-EVHVRRWTK  107 (112)
Q Consensus        90 ~lv~e~~~~-~~l~~~~~~  107 (112)
                      |+||||+.+ +++.+.+..
T Consensus        85 ~lv~e~~~~~~~l~~~~~~  103 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITE  103 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHH
T ss_pred             EEEEEeccCcchHHHHHhc
Confidence            999999986 456666543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.8e-16  Score=98.16  Aligned_cols=92  Identities=15%  Similarity=0.026  Sum_probs=69.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCC-----CCCeEEEEEcccccCChhhHHHHHHHHHHHhhC-CCCCeEeeeccCCC-CC
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPR-----DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFF-KHDNVSITQHTPYT-TR   87 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~-----~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~   87 (112)
                      .+.+.+.||+|+|| .||++....     +++.||+|.+... ......+.+.+|..++.++ +|+||+.+...+.. ..
T Consensus        14 ~y~~~~~iG~G~fG-~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          14 RLKLGKPLGRGAFG-QVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GEEEEEEEEECSSC-EEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HEEEeeEEeecCCe-EEEEEEEcCCCcccCCeEEEEEEEccc-cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            35778899999999 999998543     3467999998632 2334456677888877776 58899977765544 66


Q ss_pred             ceEEEEeccCCcchhhhhhhc
Q psy16893         88 RMYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        88 ~~~lv~e~~~~~~l~~~~~~~  108 (112)
                      .++++|||+++|+|.+++..+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHT
T ss_pred             eEEEEEEecCCCcHHHHHHhc
Confidence            789999999999999998654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=5e-16  Score=97.93  Aligned_cols=87  Identities=11%  Similarity=0.018  Sum_probs=64.4

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCCCC----CceEE
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTT----RRMYP   91 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~l   91 (112)
                      +.+.+.||+|+|| .||++..  +++.||+|.+...   .........|+..+..++|||||.+.+.+...    ..+|+
T Consensus         5 ~~l~~~iG~G~fg-~Vy~~~~--~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           5 IVLQESIGKGRFG-EVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             EEEEEEEECCSSS-EEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEeeCCCe-EEEEEEE--CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            4677889999999 9999985  4788999998532   11112233445455677899999888766542    36899


Q ss_pred             EEeccCCcchhhhhhhc
Q psy16893         92 GLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        92 v~e~~~~~~l~~~~~~~  108 (112)
                      ||||+++|+|.+.++..
T Consensus        79 v~Ey~~~g~L~~~l~~~   95 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY   95 (303)
T ss_dssp             EEECCTTCBHHHHHHHC
T ss_pred             EEecccCCCHHHHHhcC
Confidence            99999999999988653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.1e-16  Score=101.79  Aligned_cols=93  Identities=13%  Similarity=0.041  Sum_probs=75.4

Q ss_pred             hhhcccccccCCcceEEEEEEc---CCCCCeEEEEEcccccC--ChhhHHHHHHHHHHHhhCCC-CCeEeeeccCCCCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTD---PRDGRRVALKKLPNVFQ--SLVSSKRVFRELKMLCFFKH-DNVSITQHTPYTTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~---~~~~~~va~k~i~~~~~--~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~   88 (112)
                      .|.+.+.||+|+|| .||++.+   ..+++.||+|.+.....  .....+.+.+|+.++++++| |||+.+...+.+...
T Consensus        25 ~y~~~~~IG~G~fg-~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          25 NFELLKVLGTGAYG-KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GEEEEEEEEETTTE-EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             ceEEEEEEecCCCe-EEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            46788899999999 9999976   34688999999864321  11223567789999999976 799999988888888


Q ss_pred             eEEEEeccCCcchhhhhhhc
Q psy16893         89 MYPGLTLRLGEVHVRRWTKD  108 (112)
Q Consensus        89 ~~lv~e~~~~~~l~~~~~~~  108 (112)
                      ++++|||+.+++|.+++...
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~  123 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQR  123 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHH
T ss_pred             eeeeeecccccHHHHHHHhc
Confidence            99999999999999988653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.7e-15  Score=97.01  Aligned_cols=79  Identities=20%  Similarity=0.060  Sum_probs=63.0

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeEeeeccCC------CCCc
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPY------TTRR   88 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------~~~~   88 (112)
                      .|...++||+|+|| .||++.+..+++.||+|.+.....      ...+|+.+|++++|+||+.+.+.+.      +..+
T Consensus        21 ~Y~~~k~LG~G~fg-~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFG-VVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTE-EEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCe-EEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence            45566789999999 999999999999999999864321      1236999999999999997766542      2446


Q ss_pred             eEEEEeccCCcc
Q psy16893         89 MYPGLTLRLGEV  100 (112)
Q Consensus        89 ~~lv~e~~~~~~  100 (112)
                      +|+||||++++.
T Consensus        94 ~~lv~Ey~~~~~  105 (350)
T d1q5ka_          94 LNLVLDYVPETV  105 (350)
T ss_dssp             EEEEEECCSEEH
T ss_pred             EEEEEeccCCcc
Confidence            899999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.1e-15  Score=94.79  Aligned_cols=89  Identities=18%  Similarity=0.080  Sum_probs=64.5

Q ss_pred             hhhhcccccccCCcceEEEEEEcCCC-CCeEEEEEcccccCChhhHHHHHHHHHHHhhC---CCCCeEeeeccCC-----
Q psy16893         14 IGTMMHDEVGLLSICSSVKAVTDPRD-GRRVALKKLPNVFQSLVSSKRVFRELKMLCFF---KHDNVSITQHTPY-----   84 (112)
Q Consensus        14 ~~~~~~~~lg~g~~g~~v~~~~~~~~-~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----   84 (112)
                      ..|.+++.||+|+|| .||++.+..+ ++.||+|.+..............+|+.+++.+   +||||+.+.+.+.     
T Consensus         7 ~~Y~i~~~LG~G~fg-~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           7 QQYECVAEIGEGAYG-KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GTEEEEEEEEEETTE-EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             CCEEEEEEEecccCe-EEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            356777899999999 9999998665 56799999864432222233455677666554   7999998776553     


Q ss_pred             CCCceEEEEeccCCcchhh
Q psy16893         85 TTRRMYPGLTLRLGEVHVR  103 (112)
Q Consensus        85 ~~~~~~lv~e~~~~~~l~~  103 (112)
                      ....++++|||+.++.+..
T Consensus        86 ~~~~~~~~~e~~~~~~~~~  104 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTY  104 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHH
T ss_pred             cCceEEEEEEeccCCchhh
Confidence            3457899999999886543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.49  E-value=1.7e-14  Score=90.37  Aligned_cols=88  Identities=10%  Similarity=-0.065  Sum_probs=69.5

Q ss_pred             hhhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC-CCeEeeeccCCCCCceEEEE
Q psy16893         15 GTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH-DNVSITQHTPYTTRRMYPGL   93 (112)
Q Consensus        15 ~~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~   93 (112)
                      .|.+.+.||+|+|| .||++.+..+++.||+|.+.....    ...+.+|++.+..+.| +|++.+..........|+||
T Consensus         6 ~Y~i~~~iG~G~fG-~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           6 HYKVGRRIGEGSFG-VIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TEEEEEEEEECSSC-EEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEEEecCCCe-EEEEEEECCCCCEEEEEEEccccC----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            35778899999999 999999999999999998753221    2345678888888875 78888887777788899999


Q ss_pred             eccCCcchhhhhhhc
Q psy16893         94 TLRLGEVHVRRWTKD  108 (112)
Q Consensus        94 e~~~~~~l~~~~~~~  108 (112)
                      ||+. ++|.+.+...
T Consensus        81 e~~~-~~l~~~~~~~   94 (293)
T d1csna_          81 DLLG-PSLEDLLDLC   94 (293)
T ss_dssp             ECCC-CBHHHHHHHT
T ss_pred             EecC-CCHHHHHHhh
Confidence            9995 6777776543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=2.4e-14  Score=89.79  Aligned_cols=86  Identities=13%  Similarity=-0.053  Sum_probs=66.0

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE-eeeccCCCCCceEEEEe
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS-ITQHTPYTTRRMYPGLT   94 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e   94 (112)
                      |.+.+.||+|+|| .||++.+..+++.||+|.+....    ....+..|+++++.++|+|++ .+.......+..++|||
T Consensus         9 Y~l~~~iG~G~fG-~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           9 YRLGRKIGSGSFG-DIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             EEEEEEEEECSSS-EEEEEEETTTTEEEEEEEEESCT----TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEeEEEeeCCCc-EEEEEEECCCCCEEEEEEEchhc----cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            5678899999999 99999999999999999875322    123467899999999877766 44555556778899999


Q ss_pred             ccCCcchhhhhhh
Q psy16893         95 LRLGEVHVRRWTK  107 (112)
Q Consensus        95 ~~~~~~l~~~~~~  107 (112)
                      |+.++ +.+.+..
T Consensus        84 ~~~~~-l~~~~~~   95 (299)
T d1ckia_          84 LLGPS-LEDLFNF   95 (299)
T ss_dssp             CCCCB-HHHHHHH
T ss_pred             EcCCc-hhhhhhh
Confidence            99764 5555543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.09  E-value=6.7e-11  Score=75.41  Aligned_cols=81  Identities=12%  Similarity=0.066  Sum_probs=59.2

Q ss_pred             hhcccccccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCC-----------CCeEeeeccCC
Q psy16893         16 TMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKH-----------DNVSITQHTPY   84 (112)
Q Consensus        16 ~~~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h-----------~niv~~~~~~~   84 (112)
                      |.+++.||+|+|| .||++.+..+++.||+|+++..   ....+...+|+.+++.+.|           +|++.+.+.+.
T Consensus        15 Y~i~~~LG~G~fg-~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          15 YILVRKLGWGHFS-TVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             EEEEEEEEECSSE-EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             EEEEEEEeeCCCe-EEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            6788999999999 9999999999999999998632   2334566788888877754           66776665543


Q ss_pred             C--CCceEEEEeccCCcc
Q psy16893         85 T--TRRMYPGLTLRLGEV  100 (112)
Q Consensus        85 ~--~~~~~lv~e~~~~~~  100 (112)
                      .  ....++++.++..+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~  108 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGE  108 (362)
T ss_dssp             EEETTEEEEEEEECCCCE
T ss_pred             eccccceeeeeeeccccc
Confidence            3  445566666665443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.85  E-value=8.5e-09  Score=60.29  Aligned_cols=78  Identities=10%  Similarity=-0.117  Sum_probs=54.0

Q ss_pred             cccccccCCcceEEEEEEcCCCCCeEEEEEcccccCC----------------hhhHHHHHHHHHHHhhCCCCCeEeeec
Q psy16893         18 MHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQS----------------LVSSKRVFRELKMLCFFKHDNVSITQH   81 (112)
Q Consensus        18 ~~~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~----------------~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (112)
                      +.+.||+|+|| .||++.+. +++.||+|.++.....                .........|...+..+.|.+++....
T Consensus         4 vg~~IG~G~~g-~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           4 IGKLMGEGKES-AVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEECSSE-EEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hCCEeeeCcce-EEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            56789999999 99999874 6889999986421100                001233456788888999998876544


Q ss_pred             cCCCCCceEEEEeccCCcch
Q psy16893         82 TPYTTRRMYPGLTLRLGEVH  101 (112)
Q Consensus        82 ~~~~~~~~~lv~e~~~~~~l  101 (112)
                      ...    -+++|||++++.+
T Consensus        82 ~~~----~~lvme~~~~~~~   97 (191)
T d1zara2          82 WEG----NAVLMELIDAKEL   97 (191)
T ss_dssp             EET----TEEEEECCCCEEG
T ss_pred             ecC----CEEEEEeeccccc
Confidence            321    2799999998754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=94.49  E-value=0.02  Score=36.21  Aligned_cols=79  Identities=15%  Similarity=-0.010  Sum_probs=43.9

Q ss_pred             cccccCCcceEEEEEEcCCCCCeEEEEEcccc---c--CChhhHHHHHHHHHHHhhCC-CC-C-eEeeeccCCCCCceEE
Q psy16893         20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNV---F--QSLVSSKRVFRELKMLCFFK-HD-N-VSITQHTPYTTRRMYP   91 (112)
Q Consensus        20 ~~lg~g~~g~~v~~~~~~~~~~~va~k~i~~~---~--~~~~~~~~~~~e~~~l~~l~-h~-n-iv~~~~~~~~~~~~~l   91 (112)
                      +.+|.|... .+|+.....+++.+++|.-...   .  .......+...|.+.|+.+. +. . +..+...  +.+.-++
T Consensus        32 ~eig~G~~N-~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          32 QEIGDGNLN-YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EECCSSSSE-EEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEeCCCceE-eEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            468889888 9999887777788999964311   0  01112234556777776553 21 1 2223222  2233478


Q ss_pred             EEeccCCcch
Q psy16893         92 GLTLRLGEVH  101 (112)
Q Consensus        92 v~e~~~~~~l  101 (112)
                      +||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999987654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.39  E-value=0.062  Score=31.46  Aligned_cols=78  Identities=13%  Similarity=0.045  Sum_probs=44.6

Q ss_pred             cCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCC-CCCeEeeeccCCCCCceEEEEeccCCcchh
Q psy16893         24 LLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNVSITQHTPYTTRRMYPGLTLRLGEVHV  102 (112)
Q Consensus        24 ~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~l~  102 (112)
                      +|...+.+|+...  .+..+.+|.......  .....+.+|..++..+. +-.+..+.......+..|+||++++|.++.
T Consensus        23 ~G~s~~~v~rv~~--~~~~~vlk~~~~~~~--~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~   98 (263)
T d1j7la_          23 EGMSPAKVYKLVG--ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             CCCSSSEEEEEEC--SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred             CCCCCCcEEEEEe--CCCeEEEEEcCCCcc--cchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence            3443327887653  455678887643221  12234566777776654 222223333334456679999999998876


Q ss_pred             hhh
Q psy16893        103 RRW  105 (112)
Q Consensus       103 ~~~  105 (112)
                      +.+
T Consensus        99 ~~~  101 (263)
T d1j7la_          99 EEY  101 (263)
T ss_dssp             HHT
T ss_pred             ccc
Confidence            554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.05  E-value=0.048  Score=31.83  Aligned_cols=76  Identities=11%  Similarity=-0.032  Sum_probs=44.1

Q ss_pred             cccCCcceEEEEEEcCCCCCeEEEEEcccccCChhhHHHHHHHHHHHhhCCCCCeE--eeeccCCCCCceEEEEeccCCc
Q psy16893         22 VGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVS--ITQHTPYTTRRMYPGLTLRLGE   99 (112)
Q Consensus        22 lg~g~~g~~v~~~~~~~~~~~va~k~i~~~~~~~~~~~~~~~e~~~l~~l~h~niv--~~~~~~~~~~~~~lv~e~~~~~   99 (112)
                      +..|.....+|+... ..+..+.+|.-....     ...+..|...++.+....+.  .+.....+.+..+++|++++|.
T Consensus        18 ~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~-----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             CSCTTSSCEEEEEEC-TTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             cCCcccCCeEEEEEe-CCCCEEEEEeCCccC-----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence            444444327888664 456668888654221     12345566666655433332  3333334456679999999987


Q ss_pred             chhh
Q psy16893        100 VHVR  103 (112)
Q Consensus       100 ~l~~  103 (112)
                      ++.+
T Consensus        92 ~~~~   95 (255)
T d1nd4a_          92 DLLS   95 (255)
T ss_dssp             ETTT
T ss_pred             cccc
Confidence            7644