Psyllid ID: psy17050

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MAFHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEccccccccccEccccccccccccccccEccccHHHEEEcccccccccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccccccEccccHHHHHHHHccccccccccccccccccEccccccEEccccccccccccccccccccccHccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccccccccEEEccHccEEEEEEcc
Coil and Loop (DISEMBL)
mafhkptasaarpaaskgppaspashmcedcgeEYWDRQSLLVHKARHDvirtergrifpchdcgktfnsrssQQIHQRIhtgerpyscrYCYKAfadggtlrkhervhtgekpyvcpicskaFNQRVVLREHirahhsgpeskgattfeckvcgcmlssspeLCQHLVQHsdentaknrvvptaprkykrrrkllphegdgfpdtdddeeasasksapadgtdtkpsasllqpprkptpeydREFLEWEMKVGInsmdkaaspvktktkvrfaavrppafhckmlrlldcldvv
Flexible Loop (DISEMBL)
mafhkptasaarpaaskgppaspASHMCEDCGEEYWDRQSLLVHKARHDvirtergrifpCHDCGKtfnsrssqQIHQRihtgerpyscRYCYKAFADGGTLRKHERVhtgekpyvcpicSKAFNQRVVLREHIRahhsgpeskgattFECKVCGCMLSSSPELCQHLVqhsdentaknrvvptaprkykrrrkllphegdgfpdtdddeEASASksapadgtdtkpsasllqpprkptPEYDREFLEWEMKVGInsmdkaaspvktktkvrfaavrppafhckmlrlldcldvv
Low Complexity Region (SEG)
MAFHKPTasaarpaaskgppaspasHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPrkykrrrkLLPHEGDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Disordered region (IsUnstruct)
***************************CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNS****QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH*******GATTFECKVCGCMLSSSPELCQHL*****************************************************************************FLEWEMKVGIN*********KTKTKVRFAAVRPPAFHCKMLRLLDCLD**
Disordered Region (DISOPRED)
MAFHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Disordered Region (DISEMBL)
***************************CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTF*************TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRA**********TTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGF************************************PEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Disordered Region (DISPRO)
MAFHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVKTKTKVRFAAVRPPAFHCKMLRLLDCLDVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q96NG8	517	Zinc finger protein 582 O	yes	N/A	0.518	0.295	0.373	1e-25
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.542	0.134	0.385	2e-25
Q6ECI4	717	Zinc finger protein 470 O	no	N/A	0.457	0.188	0.452	4e-25
P17036	446	Zinc finger protein 3 OS=	no	N/A	0.464	0.307	0.418	5e-25
Q9Y2H8	683	Zinc finger protein 510 O	no	N/A	0.538	0.232	0.365	5e-25
Q8IYB9	648	Zinc finger protein 595 O	no	N/A	0.467	0.212	0.402	1e-24
Q8BLB0	497	Zinc finger protein 3 OS=	no	N/A	0.498	0.295	0.393	1e-24
P10076	861	Zinc finger protein 26 OS	no	N/A	0.461	0.157	0.428	2e-24
Q9NW07	568	Zinc finger protein 358 O	no	N/A	0.457	0.237	0.391	2e-24
P18715	337	Gastrula zinc finger prot	N/A	N/A	0.532	0.465	0.348	2e-24

>sp|Q96NG8|ZN582_HUMAN Zinc finger protein 582 OS=Homo sapiens GN=ZNF582 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 94/174 (54%), Gaps = 21/174 (12%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
           + C++CG+ +  R  L+    +H  + T R +++ C +CGK FN  S+   HQRIHTGE+
Sbjct: 311 YACKECGKTFSHRSQLI----QHQTVHTGR-KLYECKECGKAFNQGSTLIRHQRIHTGEK 365

Query: 86  PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
           PY C+ C KAF     L++H+R+HTGEKPY C +C +AF +   L  H R H       G
Sbjct: 366 PYECKVCGKAFRVSSQLKQHQRIHTGEKPYQCKVCGRAFKRVSHLTVHYRIH------TG 419

Query: 146 ATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              +ECK CG   S   +L  H V H+++           P +YK   K L H+
Sbjct: 420 EKPYECKECGKAFSHCSQLIHHQVIHTEKK----------PYEYKECEKTLSHD 463

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 14/174 (8%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
           + CE+CG+ +    +L  HK     I   + +I+ C +CGK F   S+   H+RIHTGE+
Sbjct: 238 YKCEECGKAFKQLSTLTTHK-----IICAKEKIYKCEECGKAFLWSSTLTRHKRIHTGEK 292

Query: 86  PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
           PY C  C KAF+   TL KH+R+HTGEKPY C  C KAF++   L +H R H       G
Sbjct: 293 PYKCEECGKAFSHSSTLAKHKRIHTGEKPYKCEECGKAFSRSSTLAKHKRIH------TG 346

Query: 146 ATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              ++CK CG   S+S  L  H + H++E   K +    A   +KR   L  H+
Sbjct: 347 EKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKA---FKRLSTLTKHK 397

Homo sapiens (taxid: 9606)

>sp|Q6ECI4|ZN470_HUMAN Zinc finger protein 470 OS=Homo sapiens GN=ZNF470 PE=2 SV=3

 Score =  115 bits (288), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 81/148 (54%), Gaps = 13/148 (8%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
           C DCG+ + D   L+ HK      RT  G R + C+ CGK F+  SS  +HQRIHTGE+P
Sbjct: 399 CIDCGKAFTDHIGLIQHK------RTHTGERPYKCNVCGKAFSHGSSLTVHQRIHTGEKP 452

Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
           Y C  C KAF+  G+L  H+RVHTGEKPY C  C KAF Q   L  H R H       G 
Sbjct: 453 YECNICEKAFSHRGSLTLHQRVHTGEKPYECKECGKAFRQSTHLAHHQRIH------TGE 506

Query: 147 TTFECKVCGCMLSSSPELCQHLVQHSDE 174
             +ECK C    S +  L QH   H+ E
Sbjct: 507 KPYECKECSKTFSQNAHLAQHQKIHTGE 534

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P17036|ZNF3_HUMAN Zinc finger protein 3 OS=Homo sapiens GN=ZNF3 PE=1 SV=3

 Score =  115 bits (287), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 11/148 (7%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
           C DCG+ +    +L++H+  H   +      + C++CGKTF+  S+   HQRIHTGE+PY
Sbjct: 258 CSDCGKTFSCSSALILHRRIHTGEKP-----YECNECGKTFSWSSTLTHHQRIHTGEKPY 312

Query: 88  SCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGAT 147
           +C  C KAF+   TL  H+R+HTGEKPY C  C KAF+Q   L +H R H       G  
Sbjct: 313 ACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIH------TGEK 366

Query: 148 TFECKVCGCMLSSSPELCQHLVQHSDEN 175
            +EC  CG   + S  L QH   H+ EN
Sbjct: 367 PYECMECGGKFTYSSGLIQHQRIHTGEN 394

Involved in cell differentiation and/or proliferation.

Homo sapiens (taxid: 9606)

>sp|Q9Y2H8|ZN510_HUMAN Zinc finger protein 510 OS=Homo sapiens GN=ZNF510 PE=2 SV=1

 Score =  115 bits (287), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 89/175 (50%), Gaps = 16/175 (9%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           + C +CG+ +  +  L+ H+      RT  G + F C +CGKTF+ +S    HQRIHT E
Sbjct: 404 YKCNECGKSFCQKGHLIQHQ------RTHTGEKPFECSECGKTFSQKSHLSTHQRIHTAE 457

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           +PY C  C K F    TLR H+R+HTGEKPY C  C K F Q+  LR+H R H       
Sbjct: 458 KPYKCNECGKTFVQKSTLRGHQRIHTGEKPYECSECGKTFVQKSTLRDHHRIH------T 511

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
           G  +F+C  CG        L  H   H+ E T +        + + R+  L+ H+
Sbjct: 512 GEKSFQCNQCGKTFGQKSNLRIHQRTHTGEKTYQ---CNECEKSFWRKDHLIQHQ 563

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8IYB9|ZN595_HUMAN Zinc finger protein 595 OS=Homo sapiens GN=ZNF595 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 11/149 (7%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
           + CE CG+ +    SL++H++ H        +++ C +CGK F   SS   H+RIHTGE+
Sbjct: 340 YTCEKCGKAFNQSSSLIIHRSIHS-----EQKLYKCEECGKAFTWSSSLNKHKRIHTGEK 394

Query: 86  PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
           PY+C  C KAF     L KH+R+HTGEKPY C  C KAFNQ   L  H R H       G
Sbjct: 395 PYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIH------SG 448

Query: 146 ATTFECKVCGCMLSSSPELCQHLVQHSDE 174
              ++C+ CG   + S  L +H   H+ E
Sbjct: 449 QKPYKCEECGKAFTRSTTLNEHKKIHTGE 477

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BLB0|ZFP3_MOUSE Zinc finger protein 3 OS=Mus musculus GN=Zfp3 PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 13/160 (8%)

Query: 16  SKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQ 74
           ++GPP     H C++CG+ +     L+ H      +R   G + F C +CGKTF + SS 
Sbjct: 126 AQGPPVGEKPHTCKECGKAFNQNSHLIQH------MRVHSGEKPFECKECGKTFGTNSSL 179

Query: 75  QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHI 134
           + HQRIH GE+P++C  C KAF     L  H R+HTGE+PY C  C KAF+Q   L  H 
Sbjct: 180 RRHQRIHAGEKPFACTECGKAFIQSSHLIHHHRIHTGERPYKCEECGKAFSQNSALILHQ 239

Query: 135 RAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
           R H       G   +EC  CG     S +L QH   H++E
Sbjct: 240 RIH------TGEKPYECNECGKTFRVSSQLIQHQRIHTEE 273

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 79/147 (53%), Gaps = 11/147 (7%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
           C++CG+ + +R SL+VH  +H      R + + C +CGKTF   S    H R HTGE+PY
Sbjct: 276 CKECGKAFTERSSLIVHLRQHT-----REKSYECKECGKTFIQPSRLTEHMRSHTGEKPY 330

Query: 88  SCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGAT 147
            C  C  AFA    L  H R HTGEKP+ C IC KAF +   L  HIR H       G  
Sbjct: 331 QCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTH------TGEK 384

Query: 148 TFECKVCGCMLSSSPELCQHLVQHSDE 174
            +ECKVCG   S    L  HL +H+ E
Sbjct: 385 PYECKVCGKAFSGRSWLTIHLRKHTGE 411

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 21  ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQR 79
             P  H C  C + +    +LL H      +RT  G R +PC  CGK F   S+   HQR
Sbjct: 258 GGPRPHKCPVCAKGFGQGSALLKH------LRTHTGERPYPCPQCGKAFGQSSALLQHQR 311

Query: 80  IHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHS 139
            HT ERPY C +C KAF     L+ H R+HTGE+PY CP CSKAF Q   L +H+  H  
Sbjct: 312 THTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQHLHVH-- 369

Query: 140 GPESKGATTFECKVCGCMLSSSPELCQH 167
                G   + C++CG     +  L +H
Sbjct: 370 ----SGERPYRCQLCGKAFGQASSLTKH 393

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P18715|ZG26_XENLA Gastrula zinc finger protein XlCGF26.1 (Fragment) OS=Xenopus laevis PE=3 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 15/172 (8%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
           C +CG+ + ++++L  H   H  ++      F C DCGK+F  R+S Q H +IHTGE+P+
Sbjct: 176 CTECGKCFAEKKTLQNHNKIHTGVKP-----FTCTDCGKSFTQRTSLQNHVKIHTGEKPF 230

Query: 88  SCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGAT 147
           +C  C K+F++  TLR+H ++HTGEKP+ C  C K+F+QR+ L+ H + H       G  
Sbjct: 231 TCTECGKSFSEKKTLREHNKIHTGEKPFTCTYCGKSFSQRISLQNHFKIH------TGEK 284

Query: 148 TFECKVCGCMLSSSPELCQHLVQ-HSDENTAKNRVVPTAPRKYKRRRKLLPH 198
            F C  CG   +    L  HL + H+ E   K        + + +++ LL H
Sbjct: 285 PFSCTECGKCFTIKSTLQSHLKRTHTGE---KPFTCTECGKSFTKKKILLKH 333

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
328717225	1011	PREDICTED: zinc finger protein 569-like	0.572	0.167	0.681	7e-65
195444404	1328	GK11348 [Drosophila willistoni] gi|19416	0.664	0.147	0.616	1e-62
195390775	1308	GJ23014 [Drosophila virilis] gi|19415212	0.637	0.143	0.638	6e-62
195060921	1320	GH14127 [Drosophila grimshawi] gi|193891	0.583	0.130	0.668	3e-61
195501570	1282	GE26438 [Drosophila yakuba] gi|194183951	0.583	0.134	0.662	3e-61
195113295	1303	GI10657 [Drosophila mojavensis] gi|19391	0.583	0.132	0.662	3e-61
194900800	1281	GG21197 [Drosophila erecta] gi|190651646	0.583	0.134	0.657	3e-60
194740894	1290	GF17472 [Drosophila ananassae] gi|190625	0.583	0.133	0.657	3e-60
24646860	1283	CG7987, isoform A [Drosophila melanogast	0.789	0.181	0.511	5e-60
20151899	897	SD01232p [Drosophila melanogaster]	0.783	0.257	0.511	7e-60

>gi|328717225|ref|XP_001945030.2| PREDICTED: zinc finger protein 569-like [Acyrthosiphon pisum]

 Score =  253 bits (646), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 120/176 (68%), Positives = 137/176 (77%), Gaps = 7/176 (3%)

Query: 27  MCEDCGEEYWDRQSLLVHKARH-DVIRTERG----RIFPCHDCGKTFNSRSSQQIHQRIH 81
           +C+ CGEE  D+++L+ HKA H + +   R     +IFPC  CGK F SRSSQQIH RIH
Sbjct: 555 VCDICGEELADKRALINHKASHSNTVSISRNSLTEKIFPCTSCGKVFGSRSSQQIHIRIH 614

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           TGERPY CRYC KAFADGGTLRKHER+HTGEKPY CP+C KAFNQRVVLREHIRAHH+G 
Sbjct: 615 TGERPYGCRYCNKAFADGGTLRKHERIHTGEKPYACPVCPKAFNQRVVLREHIRAHHAGT 674

Query: 142 ESKGATT--FECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKL 195
           E+KG     +ECKVCG +  SS ELC HLVQHSDENT ++RVVP  PRKYKRR KL
Sbjct: 675 EAKGGQVNFYECKVCGYLFRSSMELCSHLVQHSDENTKRSRVVPVGPRKYKRRSKL 730

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195444404|ref|XP_002069851.1| GK11348 [Drosophila willistoni] gi|194165936|gb|EDW80837.1| GK11348 [Drosophila willistoni]

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/201 (61%), Positives = 142/201 (70%), Gaps = 5/201 (2%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 603 SVVCEVCQEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 660

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPE-S 143
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG + +
Sbjct: 661 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVT 720

Query: 144 KGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGF 203
           KG  T+ C VC   L SS EL QHL+QHSD NTAK R   T PRKYKRRRKL PHE    
Sbjct: 721 KG--TYHCTVCSADLPSSNELIQHLIQHSDSNTAKQRAPITGPRKYKRRRKLQPHEIAQM 778

Query: 204 PDTDDDEEASASKSAPADGTD 224
            D   D E +       D  D
Sbjct: 779 RDEHQDVETAGDDGLVEDEGD 799

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195390775|ref|XP_002054043.1| GJ23014 [Drosophila virilis] gi|194152129|gb|EDW67563.1| GJ23014 [Drosophila virilis]

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/191 (63%), Positives = 140/191 (73%), Gaps = 3/191 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 604 SVVCEVCHEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 661

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG ++ 
Sbjct: 662 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAV 721

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFP 204
              T+ C VC   LSSS EL QHL+QHSD NTAK R   T PRKYKRRRKL PHE     
Sbjct: 722 RG-TYHCTVCSADLSSSNELIQHLIQHSDTNTAKQRQPITGPRKYKRRRKLQPHEIAHMR 780

Query: 205 DTDDDEEASAS 215
             + D E  AS
Sbjct: 781 AGNKDGEEYAS 791

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195060921|ref|XP_001995887.1| GH14127 [Drosophila grimshawi] gi|193891679|gb|EDV90545.1| GH14127 [Drosophila grimshawi]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 135/175 (77%), Gaps = 3/175 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 640 SVVCEVCHEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 697

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG ++ 
Sbjct: 698 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDA- 756

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              T+ C VC   LSSS +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE
Sbjct: 757 ARGTYHCTVCSADLSSSNDLIQHLIQHSDTNTAKQRQPITGPRKYKRRRKLQPHE 811

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195501570|ref|XP_002097850.1| GE26438 [Drosophila yakuba] gi|194183951|gb|EDW97562.1| GE26438 [Drosophila yakuba]

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 134/175 (76%), Gaps = 3/175 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 586 SVVCEVCQEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 643

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +  
Sbjct: 644 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDV- 702

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              T+ C VC   LS+S +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE
Sbjct: 703 ARNTYHCTVCSEDLSTSNDLIQHLIQHSDSNTAKQRQPVTGPRKYKRRRKLQPHE 757

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195113295|ref|XP_002001203.1| GI10657 [Drosophila mojavensis] gi|193917797|gb|EDW16664.1| GI10657 [Drosophila mojavensis]

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 134/175 (76%), Gaps = 3/175 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 607 SVVCEVCHEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 664

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY C YC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG ++ 
Sbjct: 665 RPYGCHYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAV 724

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              T+ C VC   +SSS EL QHL+QHSD NTAK R   T PRKYKRRRKL PHE
Sbjct: 725 RG-TYHCTVCSADMSSSNELIQHLIQHSDTNTAKQRQPITGPRKYKRRRKLQPHE 778

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194900800|ref|XP_001979943.1| GG21197 [Drosophila erecta] gi|190651646|gb|EDV48901.1| GG21197 [Drosophila erecta]

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 133/175 (76%), Gaps = 3/175 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 585 SVVCEVCQEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 642

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +  
Sbjct: 643 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVT 702

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              T+ C VC   L +S +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE
Sbjct: 703 -RNTYHCTVCSEDLLTSNDLIQHLIQHSDSNTAKQRQPVTGPRKYKRRRKLQPHE 756

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194740894|ref|XP_001952925.1| GF17472 [Drosophila ananassae] gi|190625984|gb|EDV41508.1| GF17472 [Drosophila ananassae]

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 132/175 (75%), Gaps = 3/175 (1%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPCH+CGKTF SRSSQQIH RIHTGE
Sbjct: 603 SVVCEVCHEEFPDGRTLSNHRHSHST--TSPGKLFPCHECGKTFGSRSSQQIHVRIHTGE 660

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +  
Sbjct: 661 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDV- 719

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE 199
              T+ C VC     SS +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE
Sbjct: 720 ARNTYHCTVCSEDFPSSNDLIQHLIQHSDSNTAKQRQPITGPRKYKRRRKLQPHE 774

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24646860|ref|NP_650375.1| CG7987, isoform A [Drosophila melanogaster] gi|24646862|ref|NP_731922.1| CG7987, isoform B [Drosophila melanogaster] gi|7299899|gb|AAF55074.1| CG7987, isoform B [Drosophila melanogaster] gi|7299900|gb|AAF55075.1| CG7987, isoform A [Drosophila melanogaster] gi|85857512|gb|ABC86292.1| LD24322p [Drosophila melanogaster]

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 134/262 (51%), Positives = 166/262 (63%), Gaps = 29/262 (11%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           S +CE C EE+ D ++L  H+  H    T  G++FPC +CGKTF SRSSQQIH RIHTGE
Sbjct: 586 SVVCEVCQEEFPDGRTLSNHRHSHST--TTPGKLFPCLECGKTFGSRSSQQIHVRIHTGE 643

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           RPY CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +  
Sbjct: 644 RPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDV- 702

Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE----- 199
              T+ C VC   L+SS +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE     
Sbjct: 703 ARNTYHCTVCSEDLASSNDLIQHLIQHSDSNTAKQRQPVTGPRKYKRRRKLQPHEIAHMR 762

Query: 200 -GDGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSM 258
             +   + D++E       A  +G D +  AS            D +F +++++   +  
Sbjct: 763 AANKHVNGDEEE-------AIGEG-DAEECAS------------DIDFCDFDVENVDDIF 802

Query: 259 DKAASPVKTKTKVRFAAVRPPA 280
           D A SP K K K   AA +  A
Sbjct: 803 DMAESPKKEKRKRGSAATKADA 824

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|20151899|gb|AAM11309.1| SD01232p [Drosophila melanogaster]

 Score =  236 bits (603), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/260 (51%), Positives = 165/260 (63%), Gaps = 29/260 (11%)

Query: 27  MCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
           +CE C EE+ D ++L  H+  H    T  G++FPC +CGKTF SRSSQQIH RIHTGERP
Sbjct: 282 VCEVCQEEFPDGRTLSNHRHSHST--TTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERP 339

Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
           Y CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +    
Sbjct: 340 YGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDV-AR 398

Query: 147 TTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHE------G 200
            T+ C VC   L+SS +L QHL+QHSD NTAK R   T PRKYKRRRKL PHE       
Sbjct: 399 NTYHCTVCSEDLASSNDLIQHLIQHSDSNTAKQRQPVTGPRKYKRRRKLQPHEIAHMRAA 458

Query: 201 DGFPDTDDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDK 260
           +   + D++E       A  +G D +  AS            D +F +++++   +  D 
Sbjct: 459 NKHVNGDEEE-------AIGEG-DAEECAS------------DIDFCDFDVENVDDIFDM 498

Query: 261 AASPVKTKTKVRFAAVRPPA 280
           A SP K K K   AA +  A
Sbjct: 499 AESPKKEKRKRGSAATKADA 518

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
FB|FBgn0038244	1283	CG7987 [Drosophila melanogaste	0.803	0.184	0.484	5.7e-54
UNIPROTKB|F1RJG7	452	ZNF582 "Uncharacterized protei	0.467	0.305	0.416	2.7e-29
UNIPROTKB|J9NXG2	517	ZNF582 "Uncharacterized protei	0.467	0.266	0.409	1.7e-28
UNIPROTKB|F1M5S6	308	F1M5S6 "Uncharacterized protei	0.477	0.457	0.435	3.1e-28
UNIPROTKB|F1MFQ5	517	ZNF582 "Uncharacterized protei	0.467	0.266	0.402	4.9e-28
UNIPROTKB|Q6ECI4	717	ZNF470 "Zinc finger protein 47	0.457	0.188	0.452	6e-28
UNIPROTKB|Q96NG8	517	ZNF582 "Zinc finger protein 58	0.467	0.266	0.402	8.3e-28
UNIPROTKB|J9P731	602	ZNF470 "Uncharacterized protei	0.461	0.225	0.448	9.7e-28
UNIPROTKB|J9P7X7	680	ZNF510 "Uncharacterized protei	0.471	0.204	0.414	1.1e-27
UNIPROTKB|I3LFP7	434	I3LFP7 "Uncharacterized protei	0.457	0.311	0.418	1.3e-27

FB|FBgn0038244 CG7987 [Drosophila melanogaster (taxid:7227)]

 Score = 569 (205.4 bits), Expect = 5.7e-54, P = 5.7e-54
 Identities = 123/254 (48%), Positives = 153/254 (60%)

Query:    27 MCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
             +CE C EE+ D ++L  H+  H    T  G++FPC +CGKTF SRSSQQIH RIHTGERP
Sbjct:   588 VCEVCQEEFPDGRTLSNHRHSHST--TTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERP 645

Query:    87 YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
             Y CRYC+KAFADGGTLRKHER+HTGEKPY C +C +AFNQRVVLREHIR+HHSG +    
Sbjct:   646 YGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDV-AR 704

Query:   147 TTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPXXXXXXXXLLPHEGDGFPDT 206
              T+ C VC   L+SS +L QHL+QHSD NTAK R   T P        L PHE       
Sbjct:   705 NTYHCTVCSEDLASSNDLIQHLIQHSDSNTAKQRQPVTGPRKYKRRRKLQPHEIAHMRAA 764

Query:   207 DDDEEASASKSAPADGTDTKPSASLLQPPRKPTPEYDREFLEWEMKVGINSMDKAASPVK 266
             +        + A  +G D +  AS            D +F +++++   +  D A SP K
Sbjct:   765 NKHVNGD-EEEAIGEG-DAEECAS------------DIDFCDFDVENVDDIFDMAESPKK 810

Query:   267 TKTKVRFAAVRPPA 280
              K K   AA +  A
Sbjct:   811 EKRKRGSAATKADA 824

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1RJG7 ZNF582 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 62/149 (41%), Positives = 87/149 (58%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
             + C+DCG+ +  R  L+    +H  I T + +++ C +CGK FN  S+   HQRIHTGE+
Sbjct:   246 YACKDCGKTFSHRSQLI----QHQTIHTGK-KLYECKECGKAFNQGSTLIRHQRIHTGEK 300

Query:    86 PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
             PY C+ C KAF     L++H+R+HTGEKPY C +C +AF +   L  H R H       G
Sbjct:   301 PYECKACGKAFRVSSQLKQHQRIHTGEKPYQCKVCGRAFKRVSHLTVHYRIH------TG 354

Query:   146 ATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                +ECK CG   S   +L QH V H++E
Sbjct:   355 EKPYECKECGKAFSHCSQLIQHQVIHAEE 383

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NXG2 ZNF582 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 321 (118.1 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 61/149 (40%), Positives = 87/149 (58%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
             + C++CG+ +  R  L+    +H  I T + +++ C +CGK FN  S+   HQRIHTGE+
Sbjct:   311 YACKECGKTFGHRSQLI----QHQTIHTGK-KLYECKECGKAFNQGSTLIRHQRIHTGEK 365

Query:    86 PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
             PY C+ C KAF     L++H+R+HTGEKPY C +CS+AF +   L  H R H       G
Sbjct:   366 PYECKACGKAFRVSSQLKQHQRIHTGEKPYQCRVCSRAFKRVSHLTVHYRIH------TG 419

Query:   146 ATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                +ECK CG       +L QH V H++E
Sbjct:   420 EKPYECKECGKAFGHCSQLIQHQVIHTEE 448

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M5S6 F1M5S6 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 67/154 (43%), Positives = 86/154 (55%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
             + C++CG+ +  +QS LV   RH   RT  G R +PC +CGK F+  S+   HQR HTGE
Sbjct:    89 YSCQECGKSF-SQQSQLV---RHQ--RTHTGERPYPCQECGKAFSQSSTLAQHQRTHTGE 142

Query:    85 RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
             +P+ C  C K F  G  L +H+R+HTGEKPYVC  C KAF+Q   L  H R H      K
Sbjct:   143 KPFKCEECGKGFVQGSHLIQHQRIHTGEKPYVCDDCGKAFSQSSSLIYHQRIH------K 196

Query:   145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTAK 178
             G   +EC  CG   S S +L  H   H+ E   K
Sbjct:   197 GEKPYECIQCGKAFSMSTQLTSHQRIHTGERPYK 230

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MFQ5 ZNF582 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 317 (116.6 bits), Expect = 4.9e-28, P = 4.9e-28
 Identities = 60/149 (40%), Positives = 87/149 (58%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
             + C++CG+ +  R  L+ H+  H    T + +++ C +CGK FN  S+   HQRIHTGE+
Sbjct:   311 YACKECGKTFSHRSQLIQHQTVH----TGK-KLYECKECGKAFNQGSTLIRHQRIHTGEK 365

Query:    86 PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
             PY C+ C KAF     L++H+R+HTGEKPY C +C +AF +   L  H R H       G
Sbjct:   366 PYECKACGKAFRVSSQLKQHQRIHTGEKPYQCKVCGRAFKRVSHLTVHYRIH------TG 419

Query:   146 ATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                +EC+ CG   S   +L QH V H++E
Sbjct:   420 EKPYECRECGKAFSHCSQLIQHQVIHTEE 448

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q6ECI4 ZNF470 "Zinc finger protein 470" [Homo sapiens (taxid:9606)]

 Score = 321 (118.1 bits), Expect = 6.0e-28, P = 6.0e-28
 Identities = 67/148 (45%), Positives = 81/148 (54%)

Query:    28 CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
             C DCG+ + D   L+ HK      RT  G R + C+ CGK F+  SS  +HQRIHTGE+P
Sbjct:   399 CIDCGKAFTDHIGLIQHK------RTHTGERPYKCNVCGKAFSHGSSLTVHQRIHTGEKP 452

Query:    87 YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
             Y C  C KAF+  G+L  H+RVHTGEKPY C  C KAF Q   L  H R H       G 
Sbjct:   453 YECNICEKAFSHRGSLTLHQRVHTGEKPYECKECGKAFRQSTHLAHHQRIH------TGE 506

Query:   147 TTFECKVCGCMLSSSPELCQHLVQHSDE 174
               +ECK C    S +  L QH   H+ E
Sbjct:   507 KPYECKECSKTFSQNAHLAQHQKIHTGE 534

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q96NG8 ZNF582 "Zinc finger protein 582" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 8.3e-28, P = 8.3e-28
 Identities = 60/149 (40%), Positives = 86/149 (57%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
             + C++CG+ +  R  L+ H+  H    T R +++ C +CGK FN  S+   HQRIHTGE+
Sbjct:   311 YACKECGKTFSHRSQLIQHQTVH----TGR-KLYECKECGKAFNQGSTLIRHQRIHTGEK 365

Query:    86 PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKG 145
             PY C+ C KAF     L++H+R+HTGEKPY C +C +AF +   L  H R H       G
Sbjct:   366 PYECKVCGKAFRVSSQLKQHQRIHTGEKPYQCKVCGRAFKRVSHLTVHYRIH------TG 419

Query:   146 ATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                +ECK CG   S   +L  H V H+++
Sbjct:   420 EKPYECKECGKAFSHCSQLIHHQVIHTEK 448

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|J9P731 ZNF470 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 317 (116.6 bits), Expect = 9.7e-28, P = 9.7e-28
 Identities = 66/147 (44%), Positives = 80/147 (54%)

Query:    28 CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
             C DCG+ + D   L+ HK  H     ER   + C+ CGK F+  SS  +HQRIHTGE+PY
Sbjct:   380 CIDCGKAFTDHIGLIQHKRIHT---GERP--YKCNVCGKAFSHGSSLTVHQRIHTGEKPY 434

Query:    88 SCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGAT 147
              C  C KAF+  G+L  H+RVHTGEKPY C  C KAF Q   L  H R H       G  
Sbjct:   435 ECNICEKAFSHRGSLTLHQRVHTGEKPYECKECGKAFRQSTHLAHHQRIH------TGEK 488

Query:   148 TFECKVCGCMLSSSPELCQHLVQHSDE 174
              +ECK C    S +  L QH   H+ E
Sbjct:   489 PYECKECSKTFSQNAHLAQHQKIHTGE 515

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P7X7 ZNF510 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 318 (117.0 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 63/152 (41%), Positives = 86/152 (56%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
             + C++CG+ ++ +  L+ H+      RT  G + F C++CGKTF+ +S    H+RIHT E
Sbjct:   401 YKCKECGKSFFQKGHLIQHQ------RTHTGEKPFECNECGKTFSQKSHLSTHRRIHTAE 454

Query:    85 RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
             +PY C  C K F    TLR H+R+HTGEKPY C  C K F Q+  LR+H R H +G +S 
Sbjct:   455 KPYKCNECGKTFVQKSTLRGHQRIHTGEKPYKCSECGKTFVQKSTLRDHHRIH-TGEKS- 512

Query:   145 GATTFECKVCGCMLSSSPELCQHLVQHSDENT 176
                 F+CK CG        L  H   HS E T
Sbjct:   513 ----FQCKECGKTFGQKSNLRIHQRTHSGEKT 540

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3LFP7 I3LFP7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 62/148 (41%), Positives = 82/148 (55%)

Query:    26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
             + C +CG+ + DR  L+ H+      RT  G R + C++CGK F   S+   HQR HTGE
Sbjct:   278 YKCNECGKAFSDRSGLIQHQ------RTHTGERPYECNECGKAFGYCSALTQHQRTHTGE 331

Query:    85 RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
             +PY C  C KAF+D   L +H+R HTGEKPY C  C KAF+Q   L +H + H       
Sbjct:   332 KPYKCNDCAKAFSDRSALIRHQRTHTGEKPYKCKDCGKAFSQSSSLTKHQKTH------T 385

Query:   145 GATTFECKVCGCMLSSSPELCQHLVQHS 172
             G   ++CK CG   S S  L QH   H+
Sbjct:   386 GEKPYKCKECGKAFSQSSSLSQHQKTHA 413

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	295
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-06
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001
PHA00733	128	PHA00733, PHA00733, hypothetical protein	0.004

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 16/25 (64%), Positives = 20/25 (80%)

Query: 102 LRKHERVHTGEKPYVCPICSKAFNQ 126
           LR+H R HTGEKPY CP+C K+F+ 
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 75 QIHQRIHTGERPYSCRYCYKAFA 97
          + H R HTGE+PY C  C K+F+
Sbjct: 3  RRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|177301 PHA00733, PHA00733, hypothetical protein

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 10/56 (17%)

Query: 114 PYVCPICSKAFNQRVVLREHIR-AHHSGPESKGATTFECKVCGCMLSSSPELCQHL 168
           PYVCP+C   F+  V L++HIR   H         +  C VCG    ++     H+
Sbjct: 73  PYVCPLCLMPFSSSVSLKQHIRYTEH---------SKVCPVCGKEFRNTDSTLDHV 119

Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
KOG2462|consensus	279		99.96
KOG2462|consensus	279		99.95
KOG1074|consensus	958		99.89
KOG3608|consensus	467		99.86
KOG3623|consensus	1007		99.85
KOG3608|consensus	467		99.83
KOG1074|consensus	958		99.81
KOG3576|consensus	267		99.79
KOG3576|consensus	267		99.78
KOG3623|consensus	1007		99.59
PLN03086	567	PRLI-interacting factor K; Provisional	99.36
PLN03086	567	PRLI-interacting factor K; Provisional	99.36
PHA00733	128	hypothetical protein	99.19
PHA00733	128	hypothetical protein	99.15
KOG3993|consensus	500		99.05
KOG3993|consensus	500		98.97
PHA02768	55	hypothetical protein; Provisional	98.82
PHA02768	55	hypothetical protein; Provisional	98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.54
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.5
PHA00616	44	hypothetical protein	98.37
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.37
PHA00732	79	hypothetical protein	98.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.27
PHA00732	79	hypothetical protein	98.25
PHA00616	44	hypothetical protein	98.25
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.02
KOG2231|consensus	669		97.94
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.9
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.85
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.76
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.74
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.7
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.68
KOG2231|consensus	669		97.68
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.56
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.55
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.45
KOG1146|consensus	1406		97.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.09
KOG2482|consensus	423		96.96
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.9
KOG4173|consensus	253		96.89
smart00355	26	ZnF_C2H2 zinc finger.	96.85
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.79
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.78
smart00355	26	ZnF_C2H2 zinc finger.	96.72
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.61
KOG2482|consensus	423		96.6
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.55
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.53
KOG2785|consensus	390		96.5
KOG2785|consensus	390		96.19
COG5048	467	FOG: Zn-finger [General function prediction only]	96.02
PRK04860	160	hypothetical protein; Provisional	95.99
COG5048	467	FOG: Zn-finger [General function prediction only]	95.97
KOG1146|consensus	1406		95.92
PRK04860	160	hypothetical protein; Provisional	95.68
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.66
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.58
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	95.39
KOG2893|consensus	341		94.87
KOG2893|consensus	341		94.85
KOG4173|consensus	253		94.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.94
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.87
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.5
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.36
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.06
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.77
COG4049	65	Uncharacterized protein containing archaeal-type C	92.69
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.03
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.56
COG4049	65	Uncharacterized protein containing archaeal-type C	90.7
KOG2186|consensus	276		89.22
KOG2186|consensus	276		88.76
KOG4124|consensus	442		88.35
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	86.12
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.04
KOG4124|consensus	442		85.79
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	85.72
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	84.9
KOG4167|consensus	907		84.63
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.68
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.08
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.71
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.22
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	80.69
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.03

>KOG2462|consensus

Probab=99.96  E-value=9.2e-31  Score=210.90  Aligned_cols=139  Identities=35%  Similarity=0.685  Sum_probs=125.6

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHh
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGT  101 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  101 (295)
                      ....|+|+.||+.+.+...|..|.+.|....  ..+.+.|.+|++.|.+...|+.|+++|+  .+++|.+||+.|...+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~--s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWL  202 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLD--SKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWL  202 (279)
T ss_pred             cCCceeccccccccccccccchhhccccccc--ccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHH
Confidence            4567999999999999999999999997554  4678899999999999999999999997  56899999999999999


Q ss_pred             HHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhh
Q psy17050        102 LRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       102 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |+-|+++|+|||||.|+.|+++|.++++|+.||++|-      +.+.|+|..|+|.|...+.|.+|...
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS------~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS------DVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhc------CCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999996      88899999999999999999999754

>KOG2462|consensus

Probab=99.95  E-value=8.6e-29  Score=199.53  Aligned_cols=139  Identities=31%  Similarity=0.661  Sum_probs=128.8

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcC---CCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTG---ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLR  131 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  131 (295)
                      ....|+|+.||+.+.+..+|.+|.++|..   .+.+.|.+|++.|.+...|+.|+++|.  -+++|.+||+.|.+.+.|+
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhh
Confidence            34568999999999999999999999864   577999999999999999999999997  6899999999999999999


Q ss_pred             HHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCCcCCCCCCCCccchhhhhccCCCCCCCCC
Q psy17050        132 EHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFP  204 (295)
Q Consensus       132 ~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  204 (295)
                      .|+|+|+      |++||.|+.|++.|.++++|+.||++|.+.   +.+.|..|++.|.++..|..|....-.
T Consensus       205 GHiRTHT------GEKPF~C~hC~kAFADRSNLRAHmQTHS~~---K~~qC~~C~KsFsl~SyLnKH~ES~C~  268 (279)
T KOG2462|consen  205 GHIRTHT------GEKPFSCPHCGKAFADRSNLRAHMQTHSDV---KKHQCPRCGKSFALKSYLNKHSESACL  268 (279)
T ss_pred             ccccccc------CCCCccCCcccchhcchHHHHHHHHhhcCC---ccccCcchhhHHHHHHHHHHhhhhccc
Confidence            9999997      999999999999999999999999999987   578899999999999999999876543

>KOG1074|consensus

Probab=99.89  E-value=5.8e-24  Score=193.23  Aligned_cols=115  Identities=23%  Similarity=0.524  Sum_probs=98.6

Q ss_pred             cccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC---cCccccCCHHH
Q psy17050         87 YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK---VCGCMLSSSPE  163 (295)
Q Consensus        87 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~---~C~~~f~~~~~  163 (295)
                      .+|-+|.++..-.+.|+.|+++|+|++||+|++||++|.++.+|+.|+-.|-..+..  .-.|.|+   +|-+.|...-.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~--R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA--RVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccc--cccccCCchhhhccccccccc
Confidence            789999999999999999999999999999999999999999999999988532221  1468999   99999999999


Q ss_pred             HHHHHhhccCC----------CCcCCCCCCCCccchhhhhccCCCCCCCC
Q psy17050        164 LCQHLVQHSDE----------NTAKNRVVPTAPRKYKRRRKLLPHEGDGF  203 (295)
Q Consensus       164 L~~H~~~h~~~----------~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  203 (295)
                      |..|+++|.+.          ......+|..|.+.|.....+..++-.+-
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~  733 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQP  733 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccC
Confidence            99999999743          22345779999999988888888887774

>KOG3608|consensus

Probab=99.86  E-value=2.4e-22  Score=166.55  Aligned_cols=172  Identities=21%  Similarity=0.433  Sum_probs=122.2

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChH
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGG  100 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  100 (295)
                      +++|..-|+.||..|.++.-|..|++.-..   ....+|.|..|.+.|.+...|+.|+..|-.  -|+|+.|+-+....+
T Consensus       203 s~eKvvACp~Cg~~F~~~tkl~DH~rRqt~---l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~s  277 (467)
T KOG3608|consen  203 SNEKVVACPHCGELFRTKTKLFDHLRRQTE---LNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSAS  277 (467)
T ss_pred             CCCeEEecchHHHHhccccHHHHHHHhhhh---hcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChH
Confidence            444555555555555555555555544322   123456666666666666666666666542  377777777777777


Q ss_pred             hHHHHHHH-hCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc--CccccCCHHHHHHHHhhccCCCCc
Q psy17050        101 TLRKHERV-HTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELCQHLVQHSDENTA  177 (295)
Q Consensus       101 ~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~  177 (295)
                      .|..|++. |...+||+|..|++.|.+.+.|..|...|       .+..|+|..  |...|.+...|++|++.++.....
T Consensus       278 sL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H-------S~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np  350 (467)
T KOG3608|consen  278 SLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH-------SKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP  350 (467)
T ss_pred             HHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc-------cccceecCCCCCcHHHHHHHHHHHHHHHhccCCCC
Confidence            88888764 66678888888888888888888888876       567788888  888888888888888877744444


Q ss_pred             CCCCCCCCccchhhhhccCCCCCCCCC
Q psy17050        178 KNRVVPTAPRKYKRRRKLLPHEGDGFP  204 (295)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  204 (295)
                      ..|.|..|.+.|++-.+|..|+...|.
T Consensus       351 ~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             CceeeecchhhhccchhHHHHHHHhhc
Confidence            678899999999999999888876664

>KOG3623|consensus

Probab=99.85  E-value=7.1e-22  Score=177.07  Aligned_cols=81  Identities=22%  Similarity=0.470  Sum_probs=75.2

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCCcCCCCCCCCccchhhhh
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRR  193 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~  193 (295)
                      +|.|..|++.|...+.|.+|.-.|.      |.++|+|.+|.+.|+.+..|..|+|.|.|+++   |+|..|+++|.-..
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHs------GqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP---fQCdKClKRFSHSG  964 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHS------GQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP---FQCDKCLKRFSHSG  964 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhc------CCCCcccchhhHhhhhhhhhhhhhhhccCCCc---chhhhhhhhccccc
Confidence            4999999999999999999999996      99999999999999999999999999999955   66888999999999


Q ss_pred             ccCCCCCCCC
Q psy17050        194 KLLPHEGDGF  203 (295)
Q Consensus       194 ~l~~H~~~~~  203 (295)
                      .+-.||..-+
T Consensus       965 SYSQHMNHRY  974 (1007)
T KOG3623|consen  965 SYSQHMNHRY  974 (1007)
T ss_pred             chHhhhccch
Confidence            9999997655

>KOG3608|consensus

Probab=99.83  E-value=4.5e-21  Score=159.02  Aligned_cols=164  Identities=23%  Similarity=0.463  Sum_probs=147.1

Q ss_pred             eec--ccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHh--cCCCCcccccchhccCChHh
Q psy17050         26 HMC--EDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIH--TGERPYSCRYCYKAFADGGT  101 (295)
Q Consensus        26 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h--~~~~~~~C~~C~~~f~~~~~  101 (295)
                      +.|  ..|-+.|.++..|+.|++.|     .+++...|+.||..|.++..|-.|++.-  ....+|.|..|.+.|.+...
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~H-----s~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTekl  252 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTH-----SNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKL  252 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhc-----CCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHH
Confidence            455  55999999999999999999     4889999999999999999999998644  45678999999999999999


Q ss_pred             HHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCCcCCCC
Q psy17050        102 LRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRV  181 (295)
Q Consensus       102 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  181 (295)
                      |..|+..|-  .-|+|+.|+......+.|..|++..|.     .+++|+|..|.+.|.+.++|.+|...|.+    ..+.
T Consensus       253 L~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs-----~dkpfKCd~Cd~~c~~esdL~kH~~~HS~----~~y~  321 (467)
T KOG3608|consen  253 LKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHS-----KDKPFKCDECDTRCVRESDLAKHVQVHSK----TVYQ  321 (467)
T ss_pred             HHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhc-----cCCCccccchhhhhccHHHHHHHHHhccc----ccee
Confidence            999999986  569999999999999999999999984     79999999999999999999999998873    3455


Q ss_pred             CCC--CccchhhhhccCCCCCCCCCC
Q psy17050        182 VPT--APRKYKRRRKLLPHEGDGFPD  205 (295)
Q Consensus       182 C~~--C~~~f~~~~~l~~H~~~~~~~  205 (295)
                      |..  |..++++...|..|++.++..
T Consensus       322 C~h~~C~~s~r~~~q~~~H~~evhEg  347 (467)
T KOG3608|consen  322 CEHPDCHYSVRTYTQMRRHFLEVHEG  347 (467)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhccC
Confidence            655  999999999999999988843

>KOG1074|consensus

Probab=99.81  E-value=5e-21  Score=174.33  Aligned_cols=85  Identities=25%  Similarity=0.467  Sum_probs=77.5

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCCc-CCCCCC---CCccchh
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTA-KNRVVP---TAPRKYK  190 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~-~~~~C~---~C~~~f~  190 (295)
                      ..|-+|-+...-++.|+-|.++|.      |+++|+|.+||+.|.++.+|+.||-.|...-+. ..+.|+   +|.++|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHt------GERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHT------GERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             cceeeeeecccchhhhhhhhhccc------CcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            689999999999999999999997      999999999999999999999999999765444 467899   9999999


Q ss_pred             hhhccCCCCCCCCCC
Q psy17050        191 RRRKLLPHEGDGFPD  205 (295)
Q Consensus       191 ~~~~l~~H~~~~~~~  205 (295)
                      ....|..|++.|...
T Consensus       680 n~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccccceEEeecCC
Confidence            999999999998844

>KOG3576|consensus

Probab=99.79  E-value=2.6e-20  Score=143.31  Aligned_cols=122  Identities=31%  Similarity=0.619  Sum_probs=111.0

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHI  134 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  134 (295)
                      +...|.|.+|++.|.-...|.+|++-|...+.+-|..||+.|...-+|++|+++|+|.+||+|..|++.|..+..|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCC-----CCCCcceecCcCccccCCHHHHHHHHhhccCCCC
Q psy17050        135 RAHHSGPE-----SKGATTFECKVCGCMLSSSPELCQHLVQHSDENT  176 (295)
Q Consensus       135 ~~~h~~~~-----~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  176 (295)
                      +..|+...     ....+.|.|..||.+-.....+..|++.|+...+
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            99887432     2456789999999999999999999999987654

>KOG3576|consensus

Probab=99.78  E-value=1.9e-19  Score=138.58  Aligned_cols=123  Identities=33%  Similarity=0.589  Sum_probs=109.4

Q ss_pred             CCCCCCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCccccc
Q psy17050         12 RPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY   91 (295)
Q Consensus        12 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   91 (295)
                      .+.+-.+..++...|.|.+|++.|.-...|..|++.|.     ..+.|-|..||+.|....+|++|+++|++.+||+|..
T Consensus       104 s~k~t~gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~-----~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~  178 (267)
T KOG3576|consen  104 SPKSTIGSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHS-----DVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSL  178 (267)
T ss_pred             CCcccccCCCCCCeeeeehhhhhhhHHHHHHHHhhhcc-----HHHHHHHhhccCcccchhhhhhhhccccCccccchhh
Confidence            33344445556778999999999999999999999995     6788999999999999999999999999999999999


Q ss_pred             chhccCChHhHHHHHHHhCC-----------CCcccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050         92 CYKAFADGGTLRKHERVHTG-----------EKPYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus        92 C~~~f~~~~~L~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      |++.|...-.|..|++.-||           .+.|+|..||+.-.....+..|+..+|.
T Consensus       179 c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  179 CEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             hhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            99999999999999886555           4569999999999999999999999984

>KOG3623|consensus

Probab=99.59  E-value=4.6e-16  Score=140.17  Aligned_cols=112  Identities=30%  Similarity=0.558  Sum_probs=93.2

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCC-------------CCccc
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE-------------RPYSC   89 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------~~~~C   89 (295)
                      .....|++|++.+..-..|+.|++.-|..   .+..|.|..|.++|..+..|.+||.+|..-             +.|+|
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhek---ne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKC  284 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEK---NEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKC  284 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhh---CCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccc
Confidence            45678999999999999999999876642   445789999999999999999999988532             44888


Q ss_pred             ccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHh
Q psy17050         90 RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus        90 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      ..|++.|+.+..|+.|+++|.|++||.|+.|++.|.....+..||...
T Consensus       285 tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  285 TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             cccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccccc
Confidence            888888888888888888888888888888888888888888887553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.36  E-value=2.3e-12  Score=116.95  Aligned_cols=144  Identities=20%  Similarity=0.443  Sum_probs=93.7

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcccccCCCCccccccc--cccccCChHHHHHHHHHhcCCCCcccccchhccCChH
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGG  100 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  100 (295)
                      ...-.|..|.... ....|..|.....      -..-.|+.  |+..|. +..+..|         +.|+.|++.|. ..
T Consensus       405 ~~~V~C~NC~~~i-~l~~l~lHe~~C~------r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s  466 (567)
T PLN03086        405 VDTVECRNCKHYI-PSRSIALHEAYCS------RHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QG  466 (567)
T ss_pred             CCeEECCCCCCcc-chhHHHHHHhhCC------CcceeCCcccccceee-ccccccC---------ccCCCCCCccc-hH
Confidence            3455799999987 5567778987652      23345763  777773 3344444         57888887774 56


Q ss_pred             hHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccC----------CHHHHHHHHhh
Q psy17050        101 TLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLS----------SSPELCQHLVQ  170 (295)
Q Consensus       101 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~----------~~~~L~~H~~~  170 (295)
                      .|..|+..+|  +++.|+ |++.+ .+..|..|+.+|.      ..+++.|.+|++.|.          ....|..|...
T Consensus       467 ~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thC------p~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~  536 (567)
T PLN03086        467 EMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTC------PLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI  536 (567)
T ss_pred             HHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccC------CCCceeCCCCCCccccCccccchhhhhhhHHHHHHh
Confidence            6788877765  677887 87644 5577777877765      677788888887774          13466677666


Q ss_pred             ccCCCCcCCCCCCCCccchhhhhccCCCC
Q psy17050        171 HSDENTAKNRVVPTAPRKYKRRRKLLPHE  199 (295)
Q Consensus       171 h~~~~~~~~~~C~~C~~~f~~~~~l~~H~  199 (295)
                      + +.   +.+.|..|++.+..+ .|..|+
T Consensus       537 C-G~---rt~~C~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        537 C-GS---RTAPCDSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             c-CC---cceEccccCCeeeeh-hHHHHH
Confidence            4 33   456677777665433 333443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.36  E-value=9e-13  Score=119.60  Aligned_cols=120  Identities=20%  Similarity=0.471  Sum_probs=97.0

Q ss_pred             eeccc--chhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHH
Q psy17050         26 HMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLR  103 (295)
Q Consensus        26 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  103 (295)
                      -.|+.  |+..| .+..+..|              +.|+.|++.|. ...|..|+.+|+  +++.|+ |++.+ .+..|.
T Consensus       434 V~Cp~~~Cg~v~-~r~el~~H--------------~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~  493 (567)
T PLN03086        434 VVCPHDGCGIVL-RVEEAKNH--------------VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMV  493 (567)
T ss_pred             eeCCccccccee-eccccccC--------------ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHH
Confidence            45764  88887 33344444              46999999996 678999999986  789999 99765 679999


Q ss_pred             HHHHHhCCCCcccCcchhhhcC----------CHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFN----------QRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      .|+..|.+.+++.|.+|++.|.          ....|..|...+       +.+++.|..||+.+..+ .|..|+...|.
T Consensus       494 ~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-------G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        494 QHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-------GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-------CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            9999999999999999999985          245899999886       78999999999988654 67788766543

>PHA00733 hypothetical protein

Probab=99.19  E-value=2e-11  Score=91.00  Aligned_cols=83  Identities=20%  Similarity=0.389  Sum_probs=59.1

Q ss_pred             CCccccccccccccCChHHHHHH--H---HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIH--Q---RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVV  129 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H--~---~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  129 (295)
                      ..+.+.|.+|+..|.....|..|  +   ..+++.++|.|..|++.|.+...|..|++.|  +.+|.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            45667777777777666655554  1   1234467788888888888888888887765  346788888888888888


Q ss_pred             HHHHHHHhcC
Q psy17050        130 LREHIRAHHS  139 (295)
Q Consensus       130 l~~H~~~~h~  139 (295)
                      |..|+...|.
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            8888887773

>PHA00733 hypothetical protein

Probab=99.15  E-value=4.9e-11  Score=88.90  Aligned_cols=96  Identities=19%  Similarity=0.369  Sum_probs=76.0

Q ss_pred             ChHHHHHHHHHhcCCCCcccccchhccCChHhHHHH--HH---HhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCC
Q psy17050         70 SRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKH--ER---VHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK  144 (295)
Q Consensus        70 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  144 (295)
                      +...|..+-..-...+++.|.+|...|.....|..|  +.   .+++.++|.|+.|++.|.+...|..|++.+.      
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~------   97 (128)
T PHA00733         24 TLEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE------   97 (128)
T ss_pred             CHHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC------
Confidence            345555544444456789999999999887777666  22   3345789999999999999999999998752      


Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                        .+|.|..|++.|.....|..|+...|+
T Consensus        98 --~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         98 --HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             --cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence              358999999999999999999988776

>KOG3993|consensus

Probab=99.05  E-value=1.7e-11  Score=104.76  Aligned_cols=175  Identities=21%  Similarity=0.267  Sum_probs=99.6

Q ss_pred             ceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCccc---ccchhccCChHh
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC---RYCYKAFADGGT  101 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~~~~  101 (295)
                      .|.|.+|...|.+...|.+|.....     --.-|+|+.|+++|..-.+|..|.+.|.....-.=   +-=.....+...
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI-----V~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae  341 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI-----VHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAE  341 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee-----EEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhh
Confidence            3889999999999999998865331     12468899999999999999999888753211000   000000000000


Q ss_pred             HHHHHHH--hCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCC-----------------------------------
Q psy17050        102 LRKHERV--HTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK-----------------------------------  144 (295)
Q Consensus       102 L~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~-----------------------------------  144 (295)
                      .+.-.+.  ...+..|.|.+|++.|.+...|+.|+.+|+......                                   
T Consensus       342 ~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~v  421 (500)
T KOG3993|consen  342 VQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEV  421 (500)
T ss_pred             hhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccce
Confidence            0000000  011224566666666666666666655555321110                                   


Q ss_pred             -----CCcceecCcCccccCCHHHHHHHHhhccCCCCcCCCCCCCCccchhhhhccCCCCCCCCCCCC
Q psy17050        145 -----GATTFECKVCGCMLSSSPELCQHLVQHSDENTAKNRVVPTAPRKYKRRRKLLPHEGDGFPDTD  207 (295)
Q Consensus       145 -----~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  207 (295)
                           ......|+.|+-.+.++..--.|.+.-..+   ..+.|.+|...|.+...|.+|+...|+.+.
T Consensus       422 l~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~---q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  422 LYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAE---QGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             eeeeccccccCCCCCCCCcccCCCCCccccccchh---hccccccchHhhhcCcchHhHhhhcChHHh
Confidence                 111244777887776655544444332222   456677888888888888888888876543

>KOG3993|consensus

Probab=98.97  E-value=7.1e-11  Score=101.07  Aligned_cols=145  Identities=20%  Similarity=0.312  Sum_probs=83.0

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCccc---CcchhhhcCCHHHHHHHHH
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV---CPICSKAFNQRVVLREHIR  135 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~---C~~C~~~f~~~~~l~~H~~  135 (295)
                      |.|..|...|.....|.+|.....-...|+|+.|++.|.-..+|..|.+.|....--.   =+-=.....+....+.--+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            6677777777777777777543333344777777777777777777777664321000   0000000011111111101


Q ss_pred             HhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCC---------------------------------------
Q psy17050        136 AHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENT---------------------------------------  176 (295)
Q Consensus       136 ~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~---------------------------------------  176 (295)
                         ++.. ..+..|.|..|++.|.+...|+.|..+|+....                                       
T Consensus       348 ---sg~d-ss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~  423 (500)
T KOG3993|consen  348 ---SGDD-SSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLY  423 (500)
T ss_pred             ---cCCc-ccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceee
Confidence               1111 233479999999999999999999888864311                                       


Q ss_pred             ----cCCCCCCCCccchhhhhccCCCCCCCCCCCC
Q psy17050        177 ----AKNRVVPTAPRKYKRRRKLLPHEGDGFPDTD  207 (295)
Q Consensus       177 ----~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  207 (295)
                          .....|+.|+..+..+..--.+.+.++..-.
T Consensus       424 ~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~  458 (500)
T KOG3993|consen  424 VAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQG  458 (500)
T ss_pred             eeccccccCCCCCCCCcccCCCCCccccccchhhc
Confidence                2234477888777777776666665554433

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=1.9e-09  Score=66.38  Aligned_cols=38  Identities=24%  Similarity=0.459  Sum_probs=17.1

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCC
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFAD   98 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   98 (295)
                      |+|+.||+.|.....|..||++|+  ++|+|..|++.|..
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~   43 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLR   43 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecc
Confidence            344444444444444444444444  34444444444443

>PHA02768 hypothetical protein; Provisional

Probab=98.78  E-value=2e-09  Score=66.20  Aligned_cols=41  Identities=29%  Similarity=0.651  Sum_probs=20.3

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHH
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPE  163 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~  163 (295)
                      |.|+.||+.|.....|..|+++|+        ++|+|..|++.|...+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--------k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--------TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--------CcccCCcccceecccce
Confidence            445555555555555555555542        34455555555544443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.54  E-value=4.9e-08  Score=51.29  Aligned_cols=24  Identities=54%  Similarity=1.135  Sum_probs=12.9

Q ss_pred             HHHHHHHhcCCCCcccccchhccC
Q psy17050         74 QQIHQRIHTGERPYSCRYCYKAFA   97 (295)
Q Consensus        74 l~~H~~~h~~~~~~~C~~C~~~f~   97 (295)
                      |..||++|+++++|.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.50  E-value=5.6e-08  Score=51.09  Aligned_cols=24  Identities=67%  Similarity=1.362  Sum_probs=13.7

Q ss_pred             HHHHHHHhCCCCcccCcchhhhcC
Q psy17050        102 LRKHERVHTGEKPYVCPICSKAFN  125 (295)
Q Consensus       102 L~~H~~~h~~~~~~~C~~C~~~f~  125 (295)
                      |.+|++.|+++++|.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555554

...

>PHA00616 hypothetical protein

Probab=98.37  E-value=1.9e-07  Score=54.66  Aligned_cols=33  Identities=18%  Similarity=0.420  Sum_probs=19.2

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCccccc
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY   91 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   91 (295)
                      |+|..||+.|..+..|..|++.|++++++.|..
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            555556655555555556655555555555544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.37  E-value=6.5e-07  Score=56.24  Aligned_cols=51  Identities=25%  Similarity=0.565  Sum_probs=24.6

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhcc
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      |.|++|++ ..+...|..|....|..    ..+.+.|++|...+.  ..|..|+..+|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~----~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRS----ESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcC----CCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555555 33444555555555432    223455555555433  25555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.30  E-value=4.1e-07  Score=61.51  Aligned_cols=22  Identities=32%  Similarity=0.712  Sum_probs=11.4

Q ss_pred             ccCcchhhhcCCHHHHHHHHHH
Q psy17050        115 YVCPICSKAFNQRVVLREHIRA  136 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~  136 (295)
                      |.|..|++.|.+...|..|++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhc
Confidence            4455555555555555555543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.27  E-value=1.6e-06  Score=54.44  Aligned_cols=52  Identities=19%  Similarity=0.362  Sum_probs=31.5

Q ss_pred             ceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      .|.|++|++. .+...|..|....|..   +.+.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~---~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRS---ESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcC---CCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4677777773 4566777776665532   234567777776543  36666666554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.25  E-value=6.6e-07  Score=60.55  Aligned_cols=47  Identities=21%  Similarity=0.350  Sum_probs=25.8

Q ss_pred             ceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHh
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      +|.|..|++.|.+...|..|++.+|       .++.|+.|++.|.   .|..|+..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H-------~~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH-------TLTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc-------CCCccCCCCCEeC---Chhhhhccc
Confidence            3556666666666666666665322       1235666666665   355555443

>PHA00616 hypothetical protein

Probab=98.25  E-value=5.6e-07  Score=52.73  Aligned_cols=24  Identities=29%  Similarity=0.635  Sum_probs=12.4

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |+|+.||+.|...+.|..|++.||
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhc
Confidence            445555555555555555555554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.02  E-value=1.5e-06  Score=72.33  Aligned_cols=58  Identities=28%  Similarity=0.575  Sum_probs=48.7

Q ss_pred             CCcccCcc--hhhhcCCHHHHHHHHHHhcCCCC-------------CCCCcceecCcCccccCCHHHHHHHHh
Q psy17050        112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPE-------------SKGATTFECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       112 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~-------------~~~~~~~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      ++||+|++  |.+.|++...|+.|+...|..+.             +...+||+|++|++.|++...|+.|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            58999998  99999999999999988774321             245689999999999999999999853

>KOG2231|consensus

Probab=97.94  E-value=2.1e-05  Score=73.14  Aligned_cols=91  Identities=23%  Similarity=0.488  Sum_probs=60.5

Q ss_pred             CHHHHHHHHHhcccccCCCCccccccccc---------cccCChHHHHHHHHHhcC-CC----CcccccchhccCChHhH
Q psy17050         37 DRQSLLVHKARHDVIRTERGRIFPCHDCG---------KTFNSRSSQQIHQRIHTG-ER----PYSCRYCYKAFADGGTL  102 (295)
Q Consensus        37 ~~~~l~~H~~~h~~~~~~~~~~~~C~~C~---------~~f~~~~~l~~H~~~h~~-~~----~~~C~~C~~~f~~~~~L  102 (295)
                      ....|+.|+..-|       +.+.|.+|-         ....+...|..|++.-.. ++    .-.|..|...|.....|
T Consensus       126 s~~~Lk~H~~~~H-------~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el  198 (669)
T KOG2231|consen  126 SVENLKNHMRDQH-------KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDEL  198 (669)
T ss_pred             HHHHHHHHHHHhh-------hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHH
Confidence            6778888885443       334454442         223345677777764222 21    24688888888888888


Q ss_pred             HHHHHHhCCCCcccCcch------hhhcCCHHHHHHHHHHhc
Q psy17050        103 RKHERVHTGEKPYVCPIC------SKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       103 ~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~h  138 (295)
                      .+|++.+|    |.|.+|      +..|.....|..|.+.+|
T Consensus       199 ~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  199 YRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            88888776    456666      455777788888888887

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.90  E-value=8.5e-06  Score=41.39  Aligned_cols=22  Identities=32%  Similarity=0.803  Sum_probs=13.7

Q ss_pred             eecCcCccccCCHHHHHHHHhh
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.85  E-value=1.1e-05  Score=57.59  Aligned_cols=73  Identities=22%  Similarity=0.406  Sum_probs=17.1

Q ss_pred             ccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHH
Q psy17050         88 SCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQH  167 (295)
Q Consensus        88 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H  167 (295)
                      +|.+|+..|.+...|..|+...|+-.   .+ ....+.....+..+++..       -...+.|..|++.|.+...|..|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---~~-~~~~l~~~~~~~~~~~~~-------~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---IP-DQKYLVDPNRLLNYLRKK-------VKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Cccccccccccccccccccccccccc---cc-cccccccccccccccccc-------cCCCCCCCccCCCCcCHHHHHHH
Confidence            36666666666666666665544321   11 111122333333443332       12357777777777777777777


Q ss_pred             Hhhc
Q psy17050        168 LVQH  171 (295)
Q Consensus       168 ~~~h  171 (295)
                      |+.+
T Consensus        70 m~~~   73 (100)
T PF12756_consen   70 MRSK   73 (100)
T ss_dssp             HHHT
T ss_pred             HcCc
Confidence            7754

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=1.1e-05  Score=40.96  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=11.1

Q ss_pred             eecccchhhccCHHHHHHHHHh
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      |+|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.76  E-value=1.5e-05  Score=56.87  Aligned_cols=24  Identities=42%  Similarity=1.006  Sum_probs=13.5

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHh
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            455666666666666666666543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.74  E-value=2.7e-05  Score=39.80  Aligned_cols=23  Identities=43%  Similarity=0.898  Sum_probs=12.2

Q ss_pred             eecCcCccccCCHHHHHHHHhhc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      |.|++|++.|.+...|..|+.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45566666666666666665554

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.70  E-value=7.7e-06  Score=68.19  Aligned_cols=53  Identities=28%  Similarity=0.648  Sum_probs=39.5

Q ss_pred             CCCccccc--chhccCChHhHHHHHHHhC-------------------CCCcccCcchhhhcCCHHHHHHHHHH
Q psy17050         84 ERPYSCRY--CYKAFADGGTLRKHERVHT-------------------GEKPYVCPICSKAFNQRVVLREHIRA  136 (295)
Q Consensus        84 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  136 (295)
                      ++||+|++  |.+.+++...|+.|+..-|                   ..+||+|++|++.|++...|+.|+.-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            36777776  7777777777777765322                   25789999999999999999988653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.68  E-value=3.3e-05  Score=39.43  Aligned_cols=23  Identities=26%  Similarity=0.621  Sum_probs=10.6

Q ss_pred             eecccchhhccCHHHHHHHHHhc
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555443

...

>KOG2231|consensus

Probab=97.68  E-value=8.7e-05  Score=69.11  Aligned_cols=100  Identities=21%  Similarity=0.387  Sum_probs=71.4

Q ss_pred             ccccccccCChHHHHHHHHHhcCCCCcccccch---------hccCChHhHHHHHHHhCC-CC----cccCcchhhhcCC
Q psy17050         61 CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCY---------KAFADGGTLRKHERVHTG-EK----PYVCPICSKAFNQ  126 (295)
Q Consensus        61 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~L~~H~~~h~~-~~----~~~C~~C~~~f~~  126 (295)
                      |..| ..|.+...|+.|+..-|+  .+.|.+|-         ....+...|..|++.-.. ++    --.|..|...|..
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld  194 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLD  194 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhcc
Confidence            4445 445588899999954432  24455443         233456788888774322 22    2469999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCcceecCcC------ccccCCHHHHHHHHhhccC
Q psy17050        127 RVVLREHIRAHHSGPESKGATTFECKVC------GCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       127 ~~~l~~H~~~~h~~~~~~~~~~~~C~~C------~~~f~~~~~L~~H~~~h~~  173 (295)
                      ...|.+|++.+|          |.|.+|      +.-|.....|..|.+.+|-
T Consensus       195 ~~el~rH~~~~h----------~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  195 DDELYRHLRFDH----------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             HHHHHHhhccce----------eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            999999999988          677777      4567788899999998774

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.56  E-value=0.0001  Score=62.40  Aligned_cols=130  Identities=28%  Similarity=0.510  Sum_probs=92.3

Q ss_pred             ceeccc--chhhccCHHHHHHHHHhcccccCCCCccccccccc---cccC------ChHHHHHHHHHhcCCCCc----cc
Q psy17050         25 SHMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCG---KTFN------SRSSQQIHQRIHTGERPY----SC   89 (295)
Q Consensus        25 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~~~----~C   89 (295)
                      .|.|+.  |.........|..|.+..|       ..+-|.+|-   +.|.      ++..|+.|...-..+..|    .|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H-------~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C  223 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQH-------GFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLC  223 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhc-------CcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchh
Confidence            377865  6666666778999988765       234566663   2332      345677776544333223    59


Q ss_pred             ccchhccCChHhHHHHHHHhCCCCcccCcchhh-------hcCCHHHHHHHHHHhcCCCCCCCCcceecCc--C----cc
Q psy17050         90 RYCYKAFADGGTLRKHERVHTGEKPYVCPICSK-------AFNQRVVLREHIRAHHSGPESKGATTFECKV--C----GC  156 (295)
Q Consensus        90 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C----~~  156 (295)
                      ..|...|.+...|..|++..| +   +|.+|++       .|.+...|..|.+..|          |.|.+  |    -.
T Consensus       224 ~FC~~~FYdDDEL~~HcR~~H-E---~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----------y~ct~qtc~~~k~~  289 (493)
T COG5236         224 IFCKIYFYDDDELRRHCRLRH-E---ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----------YCCTFQTCRVGKCY  289 (493)
T ss_pred             hhccceecChHHHHHHHHhhh-h---hhhhhhccCccchhhhhCHHHHHHHhhcCc----------eEEEEEEEecCcEE
Confidence            999999999999999999766 3   4666654       4888899999998776          77765  4    24


Q ss_pred             ccCCHHHHHHHHhhccCCC
Q psy17050        157 MLSSSPELCQHLVQHSDEN  175 (295)
Q Consensus       157 ~f~~~~~L~~H~~~h~~~~  175 (295)
                      +|...-.|..|+...|+..
T Consensus       290 vf~~~~el~~h~~~~h~~~  308 (493)
T COG5236         290 VFPYHTELLEHLTRFHKVN  308 (493)
T ss_pred             EeccHHHHHHHHHHHhhcc
Confidence            7899999999998766643

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.55  E-value=5.9e-05  Score=39.87  Aligned_cols=25  Identities=40%  Similarity=0.692  Sum_probs=18.5

Q ss_pred             ceecCcCccccCCHHHHHHHHhhcc
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      +|.|..|++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777777664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.45  E-value=7.8e-05  Score=39.40  Aligned_cols=25  Identities=28%  Similarity=0.626  Sum_probs=17.1

Q ss_pred             ceecccchhhccCHHHHHHHHHhcc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      +|+|..|++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776653

>KOG1146|consensus

Probab=97.43  E-value=0.00019  Score=70.83  Aligned_cols=115  Identities=18%  Similarity=0.268  Sum_probs=82.0

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcccc--------------------cCCCCccccccccccccCChHHHHHHHHHh-
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHDVI--------------------RTERGRIFPCHDCGKTFNSRSSQQIHQRIH-   81 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h-   81 (295)
                      .+.|+|+.|+..|+....|..||+..|..                    ...++++|.|..|...+..+..|.+|++.- 
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~  542 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDL  542 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHHh
Confidence            36799999999999999999999983311                    123457899999999999999999998632 


Q ss_pred             -cC-----------------------------------------CCCcccccchhccCChHhHHHHHHH-hCCCCcccCc
Q psy17050         82 -TG-----------------------------------------ERPYSCRYCYKAFADGGTLRKHERV-HTGEKPYVCP  118 (295)
Q Consensus        82 -~~-----------------------------------------~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~C~  118 (295)
                       ..                                         .-.|.|.+|++.-....+|+-|+.. ++...+..|.
T Consensus       543 h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~p~~~L  622 (1406)
T KOG1146|consen  543 HRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSPPSLVL  622 (1406)
T ss_pred             hHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCChHHHh
Confidence             10                                         0128899999888888888888774 4433335566


Q ss_pred             chhhhcCCHHHHHHHHHHh
Q psy17050        119 ICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~~  137 (295)
                      .|+..+.....+..+.+.+
T Consensus       623 q~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  623 QQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             hhcchhhccccccCcCCCC
Confidence            6665555555555554444

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.09  E-value=0.00031  Score=42.14  Aligned_cols=20  Identities=20%  Similarity=0.479  Sum_probs=6.4

Q ss_pred             cccccccccCChHHHHHHHH
Q psy17050         60 PCHDCGKTFNSRSSQQIHQR   79 (295)
Q Consensus        60 ~C~~C~~~f~~~~~l~~H~~   79 (295)
                      .|++|+..+....+|++|+.
T Consensus        26 tCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   26 TCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             E-TTT--EESSHHHHHHHHH
T ss_pred             CCCcchhhccchhhHHHHHH
Confidence            33333333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2482|consensus

Probab=96.96  E-value=0.0014  Score=55.59  Aligned_cols=55  Identities=15%  Similarity=0.185  Sum_probs=39.8

Q ss_pred             eecCcCccccCCHHHHHHHHhhccCCC------------------------CcCCCCCCCCccchhhhhccCCCCCCCC
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHSDEN------------------------TAKNRVVPTAPRKYKRRRKLLPHEGDGF  203 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~~~~------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~~  203 (295)
                      ..|-+|.....+...|..||+.-|...                        ......|-.|...|.....|..|+-.+.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~k  358 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVEDK  358 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccccc
Confidence            578888888888888888887654321                        1234567788889999999998886543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.90  E-value=0.00091  Score=40.18  Aligned_cols=28  Identities=21%  Similarity=0.490  Sum_probs=11.3

Q ss_pred             CCcccccchhccCChHhHHHHHHHhCCC
Q psy17050         85 RPYSCRYCYKAFADGGTLRKHERVHTGE  112 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  112 (295)
                      .|..|++|+..+....+|++|+..+|+.
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            3444555555555555555555444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG4173|consensus

Probab=96.89  E-value=0.00061  Score=53.51  Aligned_cols=85  Identities=22%  Similarity=0.551  Sum_probs=63.5

Q ss_pred             Cccccc--chhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCC----CCCCCCcceecCc--Cccc
Q psy17050         86 PYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG----PESKGATTFECKV--CGCM  157 (295)
Q Consensus        86 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~----~~~~~~~~~~C~~--C~~~  157 (295)
                      .|.|++  |-..|.+......|...-|+.   .|..|.+.|.+...|-.|+..-|..    ....|.-+|+|-+  |+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            467777  777888877777777665543   5888888888888888888776631    1223567899976  9999


Q ss_pred             cCCHHHHHHHHhhccC
Q psy17050        158 LSSSPELCQHLVQHSD  173 (295)
Q Consensus       158 f~~~~~L~~H~~~h~~  173 (295)
                      |.+......|+..-|.
T Consensus       156 FkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhHHHHhcc
Confidence            9999999999866443

>smart00355 ZnF_C2H2 zinc finger

Probab=96.85  E-value=0.00094  Score=34.41  Aligned_cols=24  Identities=29%  Similarity=0.729  Sum_probs=18.1

Q ss_pred             eecCcCccccCCHHHHHHHHhhcc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      |.|..|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467788888888888888877653

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.79  E-value=0.0012  Score=56.14  Aligned_cols=129  Identities=24%  Similarity=0.392  Sum_probs=83.3

Q ss_pred             ccccc--cccccCChHHHHHHHHHhcCCCCcccccchh---ccC------ChHhHHHHHHHhCCCCc----ccCcchhhh
Q psy17050         59 FPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCRYCYK---AFA------DGGTLRKHERVHTGEKP----YVCPICSKA  123 (295)
Q Consensus        59 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f~------~~~~L~~H~~~h~~~~~----~~C~~C~~~  123 (295)
                      |.|+.  |..+......|+.|.+..|+.  +.|.+|-.   .|.      +...|..|...-..+..    -.|.+|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            67875  777777788899999876654  67777643   333      34556666553332222    369999999


Q ss_pred             cCCHHHHHHHHHHhcCCCCCCCCcceecCcCcc-------ccCCHHHHHHHHhhccCCCCcCCCCCCCC-ccchhhhhcc
Q psy17050        124 FNQRVVLREHIRAHHSGPESKGATTFECKVCGC-------MLSSSPELCQHLVQHSDENTAKNRVVPTA-PRKYKRRRKL  195 (295)
Q Consensus       124 f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~-------~f~~~~~L~~H~~~h~~~~~~~~~~C~~C-~~~f~~~~~l  195 (295)
                      |.+...|..|++..|       ++   |.+|.+       -|++..+|..|.+.-|---..  ..|..- -..|.....|
T Consensus       230 FYdDDEL~~HcR~~H-------E~---ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~--qtc~~~k~~vf~~~~el  297 (493)
T COG5236         230 FYDDDELRRHCRLRH-------EA---CHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTF--QTCRVGKCYVFPYHTEL  297 (493)
T ss_pred             ecChHHHHHHHHhhh-------hh---hhhhhccCccchhhhhCHHHHHHHhhcCceEEEE--EEEecCcEEEeccHHHH
Confidence            999999999999987       34   555554       488899999998764321110  011111 1356666666


Q ss_pred             CCCCCC
Q psy17050        196 LPHEGD  201 (295)
Q Consensus       196 ~~H~~~  201 (295)
                      +.|+..
T Consensus       298 ~~h~~~  303 (493)
T COG5236         298 LEHLTR  303 (493)
T ss_pred             HHHHHH
Confidence            666643

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.78  E-value=0.0011  Score=33.78  Aligned_cols=23  Identities=30%  Similarity=0.664  Sum_probs=10.9

Q ss_pred             eecCcCccccCCHHHHHHHHhhcc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      |+|+.|+.... ...|..|++.||
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            44555555554 555555555443

>smart00355 ZnF_C2H2 zinc finger

Probab=96.72  E-value=0.0014  Score=33.69  Aligned_cols=22  Identities=45%  Similarity=0.936  Sum_probs=11.1

Q ss_pred             cccccccccCChHHHHHHHHHh
Q psy17050         60 PCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        60 ~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      .|..|++.|.+...|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.61  E-value=0.0013  Score=33.91  Aligned_cols=21  Identities=24%  Similarity=0.518  Sum_probs=12.7

Q ss_pred             eecccchhhccCHHHHHHHHH
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      |.|.+|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456666666666666666654

>KOG2482|consensus

Probab=96.60  E-value=0.0037  Score=53.11  Aligned_cols=145  Identities=23%  Similarity=0.339  Sum_probs=91.0

Q ss_pred             Cceecccchhhc-cCHHHHHHHHHhcccccCCC-----------------CccccccccccccCChHHHHHHHHH--hcC
Q psy17050         24 ASHMCEDCGEEY-WDRQSLLVHKARHDVIRTER-----------------GRIFPCHDCGKTFNSRSSQQIHQRI--HTG   83 (295)
Q Consensus        24 ~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~-----------------~~~~~C~~C~~~f~~~~~l~~H~~~--h~~   83 (295)
                      ..-+|-.|+..+ .++..+..|+...|+...+.                 -..+.|-.|.+.|+.+..|+.||+.  |-.
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            456799998766 56677888877655443211                 1236799999999999999999965  322


Q ss_pred             CCC--------cccccchhccCChHhHHHHHHH----h--C-------------CCCc--ccCcchhhhcCCHHHHHHHH
Q psy17050         84 ERP--------YSCRYCYKAFADGGTLRKHERV----H--T-------------GEKP--YVCPICSKAFNQRVVLREHI  134 (295)
Q Consensus        84 ~~~--------~~C~~C~~~f~~~~~L~~H~~~----h--~-------------~~~~--~~C~~C~~~f~~~~~l~~H~  134 (295)
                      ..|        |.=++   .-..+++...|...    -  .             +..+  .+|-+|...+.+...|..||
T Consensus       223 inPknreYDkfyiINY---~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHm  299 (423)
T KOG2482|consen  223 INPKNREYDKFYIINY---LEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHM  299 (423)
T ss_pred             cCCCccccceEEEEeH---hhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHH
Confidence            211        11111   00111122222111    1  1             1122  58999999999999999999


Q ss_pred             HHhcCCCC---------------------CCCCcceecCcCccccCCHHHHHHHHhhc
Q psy17050        135 RAHHSGPE---------------------SKGATTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       135 ~~~h~~~~---------------------~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      ...|.-.-                     ......-.|..|.-.|.....|..||..+
T Consensus       300 k~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  300 KIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            98874210                     01223456889999999999999999754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.55  E-value=0.0017  Score=33.37  Aligned_cols=22  Identities=41%  Similarity=0.693  Sum_probs=15.7

Q ss_pred             eecCcCccccCCHHHHHHHHhh
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5677777777777777777654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.53  E-value=0.002  Score=32.77  Aligned_cols=9  Identities=22%  Similarity=0.648  Sum_probs=2.6

Q ss_pred             ecccchhhc
Q psy17050         27 MCEDCGEEY   35 (295)
Q Consensus        27 ~C~~C~~~f   35 (295)
                      +|+.|+...
T Consensus         2 ~C~~C~y~t   10 (24)
T PF13909_consen    2 KCPHCSYST   10 (24)
T ss_dssp             E-SSSS-EE
T ss_pred             CCCCCCCcC
Confidence            333333333

>KOG2785|consensus

Probab=96.50  E-value=0.0083  Score=51.96  Aligned_cols=56  Identities=21%  Similarity=0.439  Sum_probs=39.9

Q ss_pred             ceecccchhhccCHHHHHHHHHhc-cccc-------------------------------CCCCccccccccccccCChH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH-DVIR-------------------------------TERGRIFPCHDCGKTFNSRS   72 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h-~~~~-------------------------------~~~~~~~~C~~C~~~f~~~~   72 (295)
                      .|+|.-|...|.+...-+.|+++. |...                               ...+-++.|..|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            589999999999998889998742 2100                               12234567888888888877


Q ss_pred             HHHHHHHH
Q psy17050         73 SQQIHQRI   80 (295)
Q Consensus        73 ~l~~H~~~   80 (295)
                      ....|+..
T Consensus        83 a~~~hl~S   90 (390)
T KOG2785|consen   83 AHENHLKS   90 (390)
T ss_pred             hHHHHHHH
Confidence            77777653

>KOG2785|consensus

Probab=96.19  E-value=0.01  Score=51.44  Aligned_cols=56  Identities=21%  Similarity=0.237  Sum_probs=36.9

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCC-----------------CCCcceecCcCc---cccCCHHHHHHHHhh
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPES-----------------KGATTFECKVCG---CMLSSSPELCQHLVQ  170 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-----------------~~~~~~~C~~C~---~~f~~~~~L~~H~~~  170 (295)
                      -.|-+|+..|.+...-..||..+|+-...                 .-..-|.|-+|+   +.|.+....+.||..
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            45666666666666666666666642111                 012347898998   999999999999975

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.02  E-value=0.0015  Score=59.28  Aligned_cols=60  Identities=32%  Similarity=0.593  Sum_probs=32.1

Q ss_pred             cccccccccccCChHHHHHHHH--HhcCC--CCcccc--cchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQR--IHTGE--RPYSCR--YCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.|
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            4455555555555555555555  45555  555555  455555555555555555554444444

>PRK04860 hypothetical protein; Provisional

Probab=95.99  E-value=0.0032  Score=48.81  Aligned_cols=37  Identities=38%  Similarity=0.836  Sum_probs=27.2

Q ss_pred             CcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCC
Q psy17050         86 PYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQ  126 (295)
Q Consensus        86 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  126 (295)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            47786 776   55667778888887778888888777654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.97  E-value=0.0014  Score=59.42  Aligned_cols=142  Identities=19%  Similarity=0.255  Sum_probs=86.5

Q ss_pred             CceecccchhhccCHHHHHHHHH--hcccccCCCC--cccccc--ccccccCChHHHHHHHHHhcCCCCccccc--chhc
Q psy17050         24 ASHMCEDCGEEYWDRQSLLVHKA--RHDVIRTERG--RIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKA   95 (295)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~   95 (295)
                      ..+.|..|...|.....|..|..  .|.     ++  +++.|+  .|++.|.....+..|...|.+..++.|..  |...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-----GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK  362 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-----cccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccc
Confidence            46778888888888788888877  453     45  677777  68888887777888887777777766655  3333


Q ss_pred             cCChHhHH-----HHHHHhCCCCcccCcc--hhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHH
Q psy17050         96 FADGGTLR-----KHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHL  168 (295)
Q Consensus        96 f~~~~~L~-----~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  168 (295)
                      +.....-.     .....-.....+.+..  |...+.....+..|...+-..    +...+.+..|...|.....+..|+
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  438 (467)
T COG5048         363 FSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSF----RPYNCKNPPCSKSFNRHYNLIPHK  438 (467)
T ss_pred             cccccCCCCccchhhccCccCCccccccccchhhhhcccccccccccccccc----CCcCCCCCcchhhccCcccccccc
Confidence            33322211     1111111223344433  666666666666666655421    223456666777777777777777


Q ss_pred             hhccCC
Q psy17050        169 VQHSDE  174 (295)
Q Consensus       169 ~~h~~~  174 (295)
                      +.|...
T Consensus       439 ~~~~~~  444 (467)
T COG5048         439 KIHTNH  444 (467)
T ss_pred             cccccC
Confidence            766553

>KOG1146|consensus

Probab=95.92  E-value=0.0023  Score=63.57  Aligned_cols=79  Identities=20%  Similarity=0.395  Sum_probs=49.0

Q ss_pred             chhccCChHhHHHHHH-HhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCC-------------------CCCcceec
Q psy17050         92 CYKAFADGGTLRKHER-VHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPES-------------------KGATTFEC  151 (295)
Q Consensus        92 C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-------------------~~~~~~~C  151 (295)
                      |+..+.....+..|+. .+.-.+.|+|+.|+..|+....|-.|+|..|.....                   -+.++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            4444444555555533 244446678888888888888888888875543211                   13345777


Q ss_pred             CcCccccCCHHHHHHHHhh
Q psy17050        152 KVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       152 ~~C~~~f~~~~~L~~H~~~  170 (295)
                      ..|...+.....|.+|+..
T Consensus       522 ~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  522 RACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             eeeeeeeecchHHHHHHHH
Confidence            7777777777777777654

>PRK04860 hypothetical protein; Provisional

Probab=95.68  E-value=0.0054  Score=47.53  Aligned_cols=39  Identities=31%  Similarity=0.783  Sum_probs=32.6

Q ss_pred             CcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCH
Q psy17050        113 KPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS  161 (295)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~  161 (295)
                      -+|.|. |+.   ....++.|.+++.      ++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~------g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVR------GEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhc------CCccEECCCCCceeEEe
Confidence            369998 987   6667889999996      88899999999988754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.66  E-value=0.0031  Score=33.15  Aligned_cols=22  Identities=36%  Similarity=0.661  Sum_probs=15.1

Q ss_pred             eecCcCccccCCHHHHHHHHhh
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777776654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.58  E-value=0.0027  Score=33.39  Aligned_cols=21  Identities=19%  Similarity=0.507  Sum_probs=14.3

Q ss_pred             eecccchhhccCHHHHHHHHH
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777777777766654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>TIGR00622 ssl1 transcription factor ssl1

Probab=95.39  E-value=0.037  Score=39.80  Aligned_cols=49  Identities=22%  Similarity=0.371  Sum_probs=33.3

Q ss_pred             cCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhcc
Q psy17050        116 VCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      .|--|...|.......        ..+......|+|+.|...|-..-+...|...|.
T Consensus        57 ~C~~C~~~f~~~~~~~--------~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSP--------FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cccCcCCCCCCccccc--------ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            4888888887643110        001124557999999999988888888877764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=94.87  E-value=0.0069  Score=48.92  Aligned_cols=42  Identities=33%  Similarity=0.630  Sum_probs=22.4

Q ss_pred             ecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHH
Q psy17050         27 MCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIH   77 (295)
Q Consensus        27 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   77 (295)
                      .|-+|++.|.....|.+|++.         +.|+|.+|.+..-+...|..|
T Consensus        12 wcwycnrefddekiliqhqka---------khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA---------KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhh---------ccceeeeehhhhccCCCceee
Confidence            455566666555555555543         235555555554444445444

>KOG2893|consensus

Probab=94.85  E-value=0.0054  Score=49.51  Aligned_cols=47  Identities=38%  Similarity=0.834  Sum_probs=38.2

Q ss_pred             CcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhh
Q psy17050        113 KPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      ++| |.+|++.|.....|.+|++..|          |+|.+|.+..-+-..|..|-..
T Consensus        10 kpw-cwycnrefddekiliqhqkakh----------fkchichkkl~sgpglsihcmq   56 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKAKH----------FKCHICHKKLFSGPGLSIHCMQ   56 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhhcc----------ceeeeehhhhccCCCceeehhh
Confidence            444 8899999999999999988776          8899999888887788777443

>KOG4173|consensus

Probab=94.40  E-value=0.028  Score=44.46  Aligned_cols=79  Identities=27%  Similarity=0.596  Sum_probs=65.7

Q ss_pred             ccccccc--cccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhC----------CCCcccCcc--hhh
Q psy17050         57 RIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHT----------GEKPYVCPI--CSK  122 (295)
Q Consensus        57 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~----------~~~~~~C~~--C~~  122 (295)
                      ..|.|++  |...|.+...+..|..+-|+   ..|..|.+.|.+...|..|+...|          |.-.|.|-.  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4577887  88899998888888766554   489999999999999999987543          455799965  999


Q ss_pred             hcCCHHHHHHHHHHhc
Q psy17050        123 AFNQRVVLREHIRAHH  138 (295)
Q Consensus       123 ~f~~~~~l~~H~~~~h  138 (295)
                      .|.+...-..|+-.-|
T Consensus       155 KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhHHHHhc
Confidence            9999999999998877

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.94  E-value=0.053  Score=27.83  Aligned_cols=19  Identities=32%  Similarity=0.891  Sum_probs=9.7

Q ss_pred             cccccccccCChHHHHHHHH
Q psy17050         60 PCHDCGKTFNSRSSQQIHQR   79 (295)
Q Consensus        60 ~C~~C~~~f~~~~~l~~H~~   79 (295)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 3444555543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.87  E-value=0.059  Score=27.68  Aligned_cols=20  Identities=25%  Similarity=0.585  Sum_probs=12.0

Q ss_pred             eecCcCccccCCHHHHHHHHh
Q psy17050        149 FECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3466666666 5555666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.50  E-value=0.057  Score=30.06  Aligned_cols=23  Identities=22%  Similarity=0.397  Sum_probs=17.3

Q ss_pred             ceecccchhhccCHHHHHHHHHh
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      .|.|.+|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888877777777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.36  E-value=0.14  Score=37.00  Aligned_cols=26  Identities=19%  Similarity=0.523  Sum_probs=23.3

Q ss_pred             ceec----CcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFEC----KVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C----~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      -|.|    ..|+..+.+...+..|++.+|+
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            4899    9999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.06  E-value=0.096  Score=29.10  Aligned_cols=23  Identities=26%  Similarity=0.561  Sum_probs=19.3

Q ss_pred             ceecCcCccccCCHHHHHHHHhh
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      .|.|.+|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47899999999988888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.77  E-value=0.13  Score=37.04  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=13.3

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHh
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      .|.|+.|...|-..-++-.|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            455666666655555555555444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.69  E-value=0.075  Score=32.55  Aligned_cols=29  Identities=17%  Similarity=0.405  Sum_probs=19.7

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      .++.-++|+-||+.|.....+..|....|
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            45556677777777777777777766554

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.03  E-value=0.27  Score=35.53  Aligned_cols=25  Identities=32%  Similarity=0.707  Sum_probs=20.2

Q ss_pred             cccC----cchhhhcCCHHHHHHHHHHhc
Q psy17050        114 PYVC----PICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       114 ~~~C----~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      .|.|    ..|++.+.+...+..|++.+|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            3778    788888888888888888877

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.56  E-value=0.082  Score=29.17  Aligned_cols=9  Identities=33%  Similarity=0.970  Sum_probs=3.9

Q ss_pred             ccccccccc
Q psy17050         60 PCHDCGKTF   68 (295)
Q Consensus        60 ~C~~C~~~f   68 (295)
                      .|..||..+
T Consensus         3 ~C~~CGy~y   11 (33)
T cd00350           3 VCPVCGYIY   11 (33)
T ss_pred             ECCCCCCEE
Confidence            344444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.70  E-value=0.13  Score=31.60  Aligned_cols=29  Identities=17%  Similarity=0.512  Sum_probs=20.6

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++--+.|+-|+..|....++.+|.+.-|+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            55667777777777777777777766544

>KOG2186|consensus

Probab=89.22  E-value=0.21  Score=41.05  Aligned_cols=49  Identities=35%  Similarity=0.633  Sum_probs=32.8

Q ss_pred             eecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhc
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      |.|..||.... ...+..|+...+      +..|.|-.|+..|.. ..++.|..--+
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCr------n~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCR------NAYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhcc------CCeeEEeeccccccc-chhhhhhhhcc
Confidence            67888887764 345666777763      366778888888876 66777754433

>KOG2186|consensus

Probab=88.76  E-value=0.26  Score=40.47  Aligned_cols=49  Identities=22%  Similarity=0.533  Sum_probs=40.5

Q ss_pred             cccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHh
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  109 (295)
                      .|.|..||.... +..+.+|+-..++ .-|.|-.|+..|.. .....|..--
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhc
Confidence            589999999887 5678889988887 66999999999988 6678886533

>KOG4124|consensus

Probab=88.35  E-value=0.049  Score=46.62  Aligned_cols=58  Identities=29%  Similarity=0.591  Sum_probs=44.9

Q ss_pred             CCcccCcc--hhhhcCCHHHHHHHHHHhcCCCC-------------CCCCcceecCcCccccCCHHHHHHHHh
Q psy17050        112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPE-------------SKGATTFECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       112 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~-------------~~~~~~~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      .++|+|+.  |.+.++....|..|....|-.+.             ....++|+|++|.+.++....|..|..
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~~~  419 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRT  419 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCceee
Confidence            46789976  99999999999999877664322             134578999999999998888877743

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=86.12  E-value=0.28  Score=27.91  Aligned_cols=34  Identities=24%  Similarity=0.548  Sum_probs=18.5

Q ss_pred             eecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccC
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFN   69 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~   69 (295)
                      +.|+.|+..|.-......          ..+....|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~----------~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG----------ANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcC----------CCCCEEECCCCCCEEE
Confidence            567777777644433221          1223566777776653

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.04  E-value=0.68  Score=33.34  Aligned_cols=13  Identities=31%  Similarity=0.733  Sum_probs=6.6

Q ss_pred             CcccccchhccCC
Q psy17050         86 PYSCRYCYKAFAD   98 (295)
Q Consensus        86 ~~~C~~C~~~f~~   98 (295)
                      |..|+.||..|.-
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            4455555555543

The function of members of this family is unknown.

>KOG4124|consensus

Probab=85.79  E-value=0.1  Score=44.71  Aligned_cols=61  Identities=16%  Similarity=0.220  Sum_probs=45.4

Q ss_pred             CCcceecCc--CccccCCHHHHHHHHhhccCC----------------CCcCCCCCCCCccchhhhhccCCCCCCCCCC
Q psy17050        145 GATTFECKV--CGCMLSSSPELCQHLVQHSDE----------------NTAKNRVVPTAPRKYKRRRKLLPHEGDGFPD  205 (295)
Q Consensus       145 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~----------------~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  205 (295)
                      ..++|+|++  |.+.++...+|..|...-|..                ...+.+.|+.|.+.++....|..|....+-+
T Consensus       346 ~~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~~~~~~~~  424 (442)
T KOG4124|consen  346 VDKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSHLQ  424 (442)
T ss_pred             ecCCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCceeehhhhh
Confidence            356799977  999999999999987653322                1246788999999999888888776655543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=85.72  E-value=0.4  Score=34.54  Aligned_cols=30  Identities=23%  Similarity=0.644  Sum_probs=18.7

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCH
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS  161 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~  161 (295)
                      ..|+.||..|...                 +..|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------------CCCCccCCCCCCccCcc
Confidence            4577777776643                 34566677777777544

The function of members of this family is unknown.

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=84.90  E-value=1  Score=38.30  Aligned_cols=93  Identities=24%  Similarity=0.423  Sum_probs=52.5

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCC-----CCc-------ccCcchhhhc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTG-----EKP-------YVCPICSKAF  124 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-----~~~-------~~C~~C~~~f  124 (295)
                      ..|.|+.|.....+              -|..|+.|.........|.+-...--.     ++|       -.|-.|.-.|
T Consensus       307 gGy~CP~CktkVCs--------------LPi~CP~Csl~LilsthLarSyhhL~PLk~f~E~p~~~~~ks~~Cf~CQ~~f  372 (421)
T COG5151         307 GGYECPVCKTKVCS--------------LPISCPICSLQLILSTHLARSYHHLYPLKPFVEKPEGTNPKSTHCFVCQGPF  372 (421)
T ss_pred             CceeCCcccceeec--------------CCccCcchhHHHHHHHHHHHHHHhhccCcccccccCCCCCCCccceeccCCC
Confidence            34667777544332              346777777665544444332211101     111       2366676666


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhc
Q psy17050        125 NQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       125 ~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      .-...        +...+......|+|+.|...|-..-+...|...|
T Consensus       373 p~~~~--------~~~~~~~ss~rY~Ce~CK~~FC~dCdvfiHe~Lh  411 (421)
T COG5151         373 PKPPV--------SPFDESTSSGRYQCELCKSTFCSDCDVFIHETLH  411 (421)
T ss_pred             CCCCC--------CcccccccccceechhhhhhhhhhhHHHHHHHHh
Confidence            54321        2233334556799999999998888888887776

>KOG4167|consensus

Probab=84.63  E-value=0.69  Score=43.85  Aligned_cols=30  Identities=20%  Similarity=0.485  Sum_probs=24.8

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      +....-|.|.+|++.|.....+..||++|.
T Consensus       787 ~~~~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  787 TDPTGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CCCCceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            334567999999999999999999999884

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.68  E-value=0.48  Score=26.30  Aligned_cols=10  Identities=20%  Similarity=0.570  Sum_probs=4.4

Q ss_pred             cccccchhcc
Q psy17050         87 YSCRYCYKAF   96 (295)
Q Consensus        87 ~~C~~C~~~f   96 (295)
                      |.|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            3444444443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.08  E-value=0.61  Score=26.25  Aligned_cols=33  Identities=27%  Similarity=0.703  Sum_probs=18.6

Q ss_pred             eecccchhhccCHHHHHHHHHhcccccCCCCcccccccccccc
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTF   68 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f   68 (295)
                      ..|+.|+..|.-......          ..+...+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~ip----------~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKIP----------PKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHCC----------CCCcEEECCCCCCEe
Confidence            457777777644433211          234556677777665

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.71  E-value=0.21  Score=40.92  Aligned_cols=13  Identities=38%  Similarity=0.853  Sum_probs=9.0

Q ss_pred             ccCcchhhhcCCH
Q psy17050        115 YVCPICSKAFNQR  127 (295)
Q Consensus       115 ~~C~~C~~~f~~~  127 (295)
                      .+|+.||++|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            4788888776643

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.22  E-value=0.74  Score=26.08  Aligned_cols=34  Identities=26%  Similarity=0.654  Sum_probs=18.4

Q ss_pred             eecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccC
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFN   69 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~   69 (295)
                      ..|+.|+..|.-...-..          .++...+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~l~----------~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDKLP----------AGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHHcc----------cCCcEEECCCCCcEee
Confidence            357777777644332111          1344566777776663

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=80.69  E-value=1.7  Score=32.58  Aligned_cols=29  Identities=24%  Similarity=0.559  Sum_probs=16.5

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhccccc
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIR   52 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   52 (295)
                      -.+....|-+||+.|+.   |..|+..||+..
T Consensus        68 I~~d~i~clecGk~~k~---LkrHL~~~~glt   96 (132)
T PF05443_consen   68 ITPDYIICLECGKKFKT---LKRHLRTHHGLT   96 (132)
T ss_dssp             B-SS-EE-TBT--EESB---HHHHHHHTT-S-
T ss_pred             cccCeeEEccCCcccch---HHHHHHHccCCC
Confidence            34556779999998854   588888887553

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.03  E-value=2.1  Score=26.87  Aligned_cols=8  Identities=50%  Similarity=1.298  Sum_probs=4.0

Q ss_pred             Ccccccch
Q psy17050         86 PYSCRYCY   93 (295)
Q Consensus        86 ~~~C~~C~   93 (295)
                      +|.|+.||
T Consensus        50 ~Y~Cp~CG   57 (61)
T COG2888          50 PYRCPKCG   57 (61)
T ss_pred             ceECCCcC
Confidence            35555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	295
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-22
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-18
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-13
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-15
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-12
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-12
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-11
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		7e-11
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		9e-11
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-10
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-09
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		6e-09
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		6e-09
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-09
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-08
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-07
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		6e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-06
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2en9_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		2e-04
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		2e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-04
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-04
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		6e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		7e-04
2lvr_A	30	Solution Structure Of Miz-1 Zinc Finger 8 Length =		8e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 13/153 (8%)
Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           + C +CG+ + D++ L  H+      RT  G + + C +CGK+F+ R++ + HQR HTGE
Sbjct: 50  YKCPECGKSFSDKKDLTRHQ------RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103
Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           +PY+C  C K+F+    LR H+R HTGEKPY CP C K+F++   L  H R H       
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH------T 157
Query: 145 GATTFECKVCGCMLSSSPELCQHLVQHSDENTA 177
           G   ++C  CG   S    L  H   H+ + T+
Sbjct: 158 GEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS 190

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           + C +CGK+F+  S+ Q HQR HTGE+PY C  C K+F+    L+KH+R HTGEKPY CP
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 119 ICSKAFNQRVVLREHIRAH 137
            C K+F++   L  H R H
Sbjct: 65  ECGKSFSRSDHLSRHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPES 143
           E+PY C  C K+F+    L+KH+R HTGEKPY CP C K+F+Q   L++H R H      
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTH------ 55
Query: 144 KGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
            G   ++C  CG   S S  L +H   H ++
Sbjct: 56  TGEKPYKCPECGKSFSRSDHLSRHQRTHQNK 86

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 29  EDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYS 88
           + C + + D  ++  H      + T   R+  C +CGK F   S  + HQ +HTGE+P+ 
Sbjct: 11  KGCTKMFRDNSAMRKH------LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 89  CRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAH 137
           C +  C K F+    LR H R+HTG++PYVCP   C+K F Q   L+ HI  H
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 64  CGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI--CS 121
           C K F   S+ + H   H G R + C  C KAF +   L++H+ VHTGEKP+ C    C 
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 122 KAFNQRVVLREHIRAHHSGPESKGATTFECKVCGC--MLSSSPELCQHLVQHS 172
           K F+    LR H+R H       G   + C   GC    + S  L  H++ H+
Sbjct: 72  KRFSLDFNLRTHVRIH------TGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 46/79 (58%)
Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           F C  CGK+F   S+   H  IH+  RPY C+YC K F     ++KH  +HTGEKP+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 119 ICSKAFNQRVVLREHIRAH 137
           +C KAF+Q   L  H R H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
           + C+ C K+F    TL  H  +H+  +PY C  C K F+Q+  +++H   H       G 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH------TGE 55
Query: 147 TTFECKVCGCMLSSSPELCQHLVQHS 172
              +C+VCG   S S  L  H  +H+
Sbjct: 56  KPHKCQVCGKAFSQSSNLITHSRKHT 81

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC 120
           C  CGK F+ +   + H R HTG +PY C+ C  A AD  +L KH R+H+ E+P+ C IC
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 121 SKAFNQRVVLREHIRAH--HSGPES 143
             A      L  H+R+H   SGP S
Sbjct: 71  PYASRNSSQLTVHLRSHTGDSGPSS 95

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 114 PYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSD 173
           P+ C +C K F+++  L+ H+R H       G   ++CK C    + S  L +HL  HSD
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCH------TGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 174 ENTAKNRVVPTAPXXXXXXXX-LLPHEGDGFPDT 206
           E   K ++ P A          L  H GD  P +
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 54  ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           ER    P   C + F+ +++   H RIHTG++P+ CR C + F+   +L  H R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 114 PYVCPICSKAFNQRVVLREHIRAH 137
           P+ C IC + F        H + H
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLV 169
           E+PY CP+  C + F+Q+  L  HIR H       G   F+C++C    S    L  H+ 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIH------TGQKPFQCRICMRNFSQQASLNAHIR 55
Query: 170 QHSDE 174
            H+ E
Sbjct: 56  THTGE 60

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 54  ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           ER    P   C + F+ +++   H RIHTG++P+ CR C + F+    L +H R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 114 PYVCPICSKAFNQRVVLREHIRAH 137
           P+ C IC + F        H + H
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLV 169
           E+PY CP+  C + F+Q+  L  HIR H       G   F+C++C    S    L QH+ 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIH------TGQKPFQCRICMRNFSQHTGLNQHIR 55
Query: 170 QHSDE 174
            H+ E
Sbjct: 56  THTGE 60

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 42/79 (53%)
Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           F C  CG+ F    +  IH+R HT ERPY+C  C+KAF     LR H  +H+ EKP+ C 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 119 ICSKAFNQRVVLREHIRAH 137
            C K F Q   L  H   H
Sbjct: 78  ECGKGFCQSRTLAVHKTLH 96

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPES 143
           E+PY C  C KAF+    L +H+RVHTGEKPY C  C KAF+Q   L  H R H SGP S
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 54  ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           ER    P   C + F+  S+   H RIHTG++P+ CR C + F+    L  H R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 114 PYVCPICSKAFNQRVVLREHIRAH 137
           P+ C IC + F +    + H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 84  ERPYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           ERPY+C    C + F+D   L +H R+HTG+KP+ C IC + F++   L  HIR H    
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---- 57
Query: 142 ESKGATTFECKVCGCMLSSSPELCQHLVQH 171
              G   F C +CG   + S E  +H   H
Sbjct: 58  --TGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 57  RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV 116
           +++PC  CGK+F  +S +  H  +H G RPY C  C K F     L  H ++HTG KPY 
Sbjct: 9   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67
Query: 117 CPICSKAFNQRVVLREHI 134
           C IC+K F  R     H+
Sbjct: 68  CNICAKRFMWRDSFHRHV 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 54  ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           ER    P   C + F+   S   H RIHTG++P+ CR C + F+    L  H R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 114 PYVCPICSKAFNQRVVLREHIRAH 137
           P+ C IC + F +    + H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 84  ERPYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           ERPY+C    C + F+  G+L +H R+HTG+KP+ C IC + F++   L  HIR H    
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---- 57
Query: 142 ESKGATTFECKVCGCMLSSSPELCQHLVQH 171
              G   F C +CG   + S E  +H   H
Sbjct: 58  --TGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 54  ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           ER    P   C + F+  +    H RIHTG++P+ CR C + F+    L  H R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 114 PYVCPICSKAFNQRVVLREHIRAH 137
           P+ C IC + F +    + H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 84  ERPYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           ERPY+C    C + F+    L +H R+HTG+KP+ C IC + F++   L  HIR H    
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---- 57
Query: 142 ESKGATTFECKVCGCMLSSSPELCQHLVQH 171
              G   F C +CG   + S E  +H   H
Sbjct: 58  --TGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 60  PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
           P   C + F+  +    H RIHTG++P+ CR C + F+    L  H R HTGEKP+ C I
Sbjct: 8   PVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 120 CSKAFNQRVVLREHIRAH 137
           C + F +    + H + H
Sbjct: 68  CGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLV 169
           E+PY CP+  C + F++   L  HIR H       G   F+C++C    S S  L  H+ 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIH------TGQKPFQCRICMRNFSRSDHLTTHIR 55
Query: 170 QHSDEN 175
            H+ E 
Sbjct: 56  THTGEK 61

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 60  PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
           P   C + F+       H RIHTG++P+ CR C + F+    L  H R HTGEKP+ C I
Sbjct: 8   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 120 CSKAFNQRVVLREHIRAH 137
           C + F +    + H + H
Sbjct: 68  CGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 60  PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
           P   C + F+       H RIHTG++P+ CR C + F+    L  H R HTGEKP+ C I
Sbjct: 7   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 66
Query: 120 CSKAFNQRVVLREHIRAH 137
           C + F +    + H + H
Sbjct: 67  CGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 60  PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
           P   C + F+       H RIHTG++P+ CR C + F+    L  H R HTGEKP+ C I
Sbjct: 8   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 120 CSKAFNQRVVLREHIRAH 137
           C + F +    + H + H
Sbjct: 68  CGRKFARSDERKRHTKIH 85

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 29  EDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCG-----KTFNSRSSQQIHQRIHTG 83
           + C +E+ D Q  LVH    + I  ER + F CH  G     + F ++    +H R HTG
Sbjct: 7   DGCSQEF-DSQEQLVHHINSEHIHGER-KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 84  ERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC--PICSKAFNQRVVLREHIRAHHS 139
           E+P+ C +  C K+++    L+ H R HTGEKPY+C    CSKAF+         RA H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS-----DRAKHQ 119
Query: 140 GPESKGATTFECKVCGC 156
                    + CK+ GC
Sbjct: 120 NRTHSNEKPYVCKLPGC 136

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 64  CGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPICS 121
           CGKT+   S  + H R HTGE+PY C +  C   FA    L +H R HTG +P+ C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 122 KAFNQRVVLREHIRAH 137
           +AF++   L  H++ H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 64  CGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPICS 121
           CGKT+   S  + H R HTGE+PY C +  C   FA    L +H R HTG +P+ C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 122 KAFNQRVVLREHIRAH 137
           +AF++   L  H++ H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 31  CGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR 90
           C + Y+    L +H  +H     E+       DC + F+     + HQR HTG +P+ C+
Sbjct: 14  CNKRYFKLSHLQMHSRKHT---GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK 70
Query: 91  YCYKAFADGGTLRKHERVHTGEKPYVC--PICSKAFNQRVVLREHIRAH 137
            C + F+    L+ H R HTGEKP+ C  P C K F +   L  H   H
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 84  ERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHHS 139
           +RP+ C Y  C K +     L+ H R HTGEKPY C    C + F++   L+ H R H  
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH-- 61
Query: 140 GPESKGATTFECKVCGCMLSSSPELCQHLVQHSDEN 175
                G   F+CK C    S S  L  H   H+ E 
Sbjct: 62  ----TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 54  ERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVH 109
           E+ RI  C    C K +   S  + H R HTGE+PY C +  C   FA    L +H R H
Sbjct: 11  EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70
Query: 110 TGEKPYVCPICSKAFNQRVVLREHIRAH 137
           TG KP+ C +C+++F++   L  H++ H
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHHSG 140
           R + C Y  C K +     L+ H R HTGEKPY C    C   F +   L  H R H   
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH--- 70
Query: 141 PESKGATTFECKVCGCMLSSSPELCQHLVQHSD 173
               GA  F+C VC    S S  L  H+ +H +
Sbjct: 71  ---TGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE--KPYVCP 118
           C  CGK F        H+  H+GE+PYSC  C   F     +  H R H G   KPY+C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 119 ICSKAFNQRVVLREHIRAHHSGPES 143
            C K F++   L  HI+  HSGP S
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 56  GRIF-PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           GR++  C  C +++   +S + H  IH+ E+ Y CRYC K F       KHE  HTGE+ 
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR 78
Query: 115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC 154
           Y C  C K+F     +  HI++ HS   S  +  +    C
Sbjct: 79  YQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPC 118

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 65  GKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--C 120
           GK+F ++     H R+HTGE+P+ C +  C K FA    L+ H+R HTGEKP+ C    C
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGC 128
Query: 121 SKAFNQRVVLREHIRAH---HSGPES 143
            + F      ++H+  H    SGP S
Sbjct: 129 DRRFANSSDRKKHMHVHTSDKSGPSS 154

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQR---IHTGE 84
           C  C +++  +  L VH  +H   +      F C  CGK +  + +   H+    ++  E
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKP-----FECPKCGKCYFRKENLLEHEARNCMNRSE 64
Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPES 143
           + ++C  C + F     LR H   HTGE PY C  CS+ F Q+  L+ H+   HSGP S
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSS 123

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           +G     C  C+K F     L+ H R HTGEKP+ CP C K + ++  L EH        
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH---EARNC 59
Query: 142 ESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
            ++    F C VC        EL  H+V H+ E
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 57  RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           R + C +CGK+F+  S    H+R HTGE+PY C  C KAF     L  H RVHTG  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           ++PY C  C  +F   G L  H+ VHTGEKPY C IC   FN+   L+ H R H
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           ERP+ C +C K + D   L +H R H G +P  CP C K F  +  +  H++ H + P
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP 59

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
           + C  C +AFA    L++H R HT EKPY C +C++AF +R +L  H +  HSG
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 63  DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI- 119
           DCG  +N     Q H   HTGE+P+ C+   C K F     L +H   HTGEK + C   
Sbjct: 10  DCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSD 69
Query: 120 -CSKAFNQRVVLREHIRAHHS 139
            C   F  +  +++H    H+
Sbjct: 70  GCDLRFTTKANMKKHFNRFHN 90

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 27/56 (48%)
Query: 83  GERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
           G     C YC K F     L  H R HTGEKPY C  C  A  Q+  LR H+  HH
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 63  DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI- 119
           DCG  +N     Q H   HTGE+P+ C+   C K F     L +H   HTGEK + C   
Sbjct: 19  DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSD 78
Query: 120 -CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
            C   F  +  +++H    H+         FE   CG       +L  H   H+ +
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFE--NCGKAFKKHNQLKVHQFSHTQQ 132

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 85  RPYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           RPY+C    C + F+    L +H R+HTG+KP+ C IC + F++   L  HIR H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAF 124
           +P+ CR C + F+    L  H R HTGEKP+ C IC + F
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF 41

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           ERPY C  C KAF D   L KH+++HTGEKP
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EN9|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 415- 447) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
          ++F C++C KTF   SS  +HQRIHTGE+P
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKP 40

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C YC KAF     L +H+R+HTGEKP
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C  C KAFA    L +H+R+HTGEKP
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 58  IFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTG 111
           ++ CH  +CGK F   +  ++HQ  HT + PY C +  C K F+    L++HE+VH G
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           +GE+PY C+ C K+F+  G+L  HER+HTG  P
Sbjct: 6   SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 58  IFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTG 111
           ++ CH  +CGK F   +  ++HQ  HT + PY C +  C K F+    L++HE+VH G
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 64  CGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVH 109
           CGKT+   S  + H R HTGE+P+SC +  C + FA    L +H R H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C  C+K+F  G +L  H+R+HTGEKP
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C  C KAF+    L +H+R+HTGEKP
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY+C  C KAF     L++H+R+HTGEKP
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C+ C KAF+    L +H+RVHTGEKP
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 100 GTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLS 159
           G+     R HTGEKPY C  C K F Q+ +L  H + +H  P    A  F C  CG   +
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD-PNFVPA-AFVCSKCGKTFT 58
Query: 160 SSPELCQH 167
               + +H
Sbjct: 59  RRNTMARH 66

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C  C KAF+   +L +H+RVH+GEKP
Sbjct: 10  EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKH--ERVHTGEKPYVCPICSKAFNQRVVLREHIRA 136
           R H+GE+PY C  C+  F   GT++ H  ++       + CP C     ++  L  H+R 
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67
Query: 137 HH--SGPES 143
            H  SGP S
Sbjct: 68  QHSYSGPSS 76

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           +PY C  C KAF+    L +H+RVHTGEKP
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2LVR|A Chain A, Solution Structure Of Miz-1 Zinc Finger 8 Length = 30

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           +PY C +C + FAD G L++H R+HTGEK
Sbjct: 2   KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           E+PY C+ C KAF     L +H++ HTGEKP
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-37
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-35
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-34
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-24
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-34
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-34
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-23
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-34
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-31
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-24
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-33
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-28
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-28
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-32
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-28
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-32
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-32
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-31
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-31
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-30
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-11
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-30
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-28
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-20
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-28
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-24
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-27
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-27
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-27
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-26
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-26
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-26
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-24
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-24
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-22
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-21
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-18
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-18
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-18
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-18
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-18
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-18
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-18
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-18
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-18
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-18
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-18
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-18
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-17
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-17
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-17
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-17
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-17
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-17
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-17
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-17
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-17
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-17
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-17
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-17
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-17
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-16
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-16
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-16
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-16
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-16
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-16
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-16
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-15
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-15
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-15
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-15
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-13
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-13
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-12
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-10
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	2e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	8e-07
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	7e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  128 bits (325), Expect = 8e-37
 Identities = 55/153 (35%), Positives = 73/153 (47%), Gaps = 23/153 (15%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C +CG+ +     L  H+           R       + C +CGK+F+ +     HQR H
Sbjct: 24  CPECGKSFSRSDHLAEHQ-----------RTHTGEKPYKCPECGKSFSDKKDLTRHQRTH 72

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           TGE+PY C  C K+F+    LR H+R HTGEKPY CP C K+F+Q   LR H R H    
Sbjct: 73  TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH---- 128

Query: 142 ESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
              G   ++C  CG   S    L  H   H+ E
Sbjct: 129 --TGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  125 bits (317), Expect = 1e-35
 Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 23/146 (15%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C +CG+ + D++ L  H+           R       + C +CGK+F+ R++ + HQR H
Sbjct: 52  CPECGKSFSDKKDLTRHQ-----------RTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGP 141
           TGE+PY+C  C K+F+    LR H+R HTGEKPY CP C K+F++   L  H R H    
Sbjct: 101 TGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH---- 156

Query: 142 ESKGATTFECKVCGCMLSSSPELCQH 167
              G   ++C  CG   S    L  H
Sbjct: 157 --TGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  123 bits (311), Expect = 1e-34
 Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 17/116 (14%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C +CG+ +  R +L  H+           R       + C +CGK+F+  +  + HQR H
Sbjct: 80  CPECGKSFSQRANLRAHQ-----------RTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           TGE+PY C  C K+F+    L  H+R HTGEKPY CP C K+F++R  L  H R H
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  108 bits (273), Expect = 5e-29
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 67  TFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQ 126
           +    SS      +  GE+PY+C  C K+F+    L +H+R HTGEKPY CP C K+F+ 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 127 RVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
           +  L  H R H       G   ++C  CG   S    L  H   H+ E
Sbjct: 62  KKDLTRHQRTH------TGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 96.4 bits (241), Expect = 2e-24
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C +CG+ +     L  H+           R       + C +CGK+F+   +   HQR H
Sbjct: 108 CPECGKSFSQLAHLRAHQ-----------RTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           TGE+PY C  C K+F+    L  H+R HTG+K 
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  119 bits (301), Expect = 1e-34
 Identities = 35/77 (45%), Positives = 45/77 (58%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC 120
           C  CGK+F   S+   H  IH+  RPY C+YC K F     ++KH  +HTGEKP+ C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 121 SKAFNQRVVLREHIRAH 137
            KAF+Q   L  H R H
Sbjct: 64  GKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 87.9 bits (219), Expect = 2e-22
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 17/93 (18%)

Query: 25  SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQ 78
           S  C+ CG+ +    +L  H             I      +PC  CGK F+ +S  + H 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHL-----------LIHSDTRPYPCQYCGKRFHQKSDMKKHT 49

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHERVHTG 111
            IHTGE+P+ C+ C KAF+    L  H R HTG
Sbjct: 50  FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 7e-18
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGA 146
           + C+ C K+F    TL  H  +H+  +PY C  C K F+Q+  +++H   H       G 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH------TGE 55

Query: 147 TTFECKVCGCMLSSSPELCQH 167
              +C+VCG   S S  L  H
Sbjct: 56  KPHKCQVCGKAFSQSSNLITH 76

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  119 bits (300), Expect = 3e-34
 Identities = 32/77 (41%), Positives = 44/77 (57%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC 120
           C  CGK F+ +   + H R HTG +PY C+ C  A AD  +L KH R+H+ E+P+ C IC
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 121 SKAFNQRVVLREHIRAH 137
             A      L  H+R+H
Sbjct: 71  PYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  102 bits (258), Expect = 5e-28
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           H CE CG+ +  +  L  H       R   G + + C  C       SS   H RIH+ E
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM------RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
           RP+ C+ C  A  +   L  H R HTG+     
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 91.3 bits (228), Expect = 1e-23
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 81  HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
                P+ C  C K F+    L+ H R HTG KPY C  C  A      L +H+R H   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--- 59

Query: 141 PESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                   F+C++C     +S +L  HL  H+ +
Sbjct: 60  ---SDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  118 bits (299), Expect = 8e-34
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHER---VHTGEKPY 115
             C  C K F S+   ++H R HTGE+P+ C  C K +     L +HE    ++  E+ +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 116 VCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQH 167
            C +C + F +R+ LR H+ +H       G   ++C  C        +L  H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSH------TGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  113 bits (285), Expect = 1e-31
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 20/125 (16%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQR-- 79
           C  C +++  +  L VH            R       F C  CGK +  + +   H+   
Sbjct: 10  CPTCHKKFLSKYYLKVHN-----------RKHTGEKPFECPKCGKCYFRKENLLEHEARN 58

Query: 80  -IHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
            ++  E+ ++C  C + F     LR H   HTGE PY C  CS+ F Q+  L+ H+   H
Sbjct: 59  CMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

Query: 139 SGPES 143
           SGP S
Sbjct: 119 SGPSS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 93.7 bits (234), Expect = 4e-24
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 11/98 (11%)

Query: 81  HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH--H 138
            +G     C  C+K F     L+ H R HTGEKP+ CP C K + ++  L EH   +  +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 139 SG--PESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
                       F C VC        EL  H+V H+ E
Sbjct: 62  RSEQV-------FTCSVCQETFRRRMELRLHMVSHTGE 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  117 bits (296), Expect = 2e-33
 Identities = 34/79 (43%), Positives = 42/79 (53%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           F C  CG+ F    +  IH+R HT ERPY+C  C+KAF     LR H  +H+ EKP+ C 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 119 ICSKAFNQRVVLREHIRAH 137
            C K F Q   L  H   H
Sbjct: 78  ECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  103 bits (259), Expect = 5e-28
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 72  SSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLR 131
           S     +     ++ + C++C + F     L  HER HT E+PY C IC KAF ++  LR
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 132 EHIRAHHSG--PESKGATTFECKVCGCMLSSSPELCQH 167
           +H    HS   P       F+C+ CG     S  L  H
Sbjct: 63  DHRYI-HSKEKP-------FKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  102 bits (258), Expect = 6e-28
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C+ CG  +    +LL+H+           R       + C  C K F  +   + H+ IH
Sbjct: 20  CKFCGRHFTKSYNLLIHE-----------RTHTDERPYTCDICHKAFRRQDHLRDHRYIH 68

Query: 82  TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
           + E+P+ C+ C K F    TL  H+ +H        
Sbjct: 69  SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  114 bits (289), Expect = 2e-32
 Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 13/99 (13%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           +PC  CGK+F  +S +  H  +H G RPY C  C K F     L  H ++HTG KPY C 
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 119 ICSKAFNQRVVLREHIRAHHSG--PESKGATTFECKVCG 155
           IC+K F  R     H+    S           +E     
Sbjct: 70  ICAKRFMWRDSFHRHV---TSCTKS-------YEAAKAE 98

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  104 bits (263), Expect = 1e-28
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
           C+ CG+ +  +     H           G R + C  CGK F  +     H +IHTG +P
Sbjct: 13  CQ-CGKSFTHKSQRDRHM------SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65

Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQR 127
           Y C  C K F    +   H  V +  K Y      +   + 
Sbjct: 66  YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 90.6 bits (226), Expect = 3e-23
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
              +G++ Y C+ C K+F       +H  +H G +PY C +C K F  +  L  H++ H 
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH- 60

Query: 139 SGPESKGATTFECKVCGCMLSSSPELCQH 167
                 G   +EC +C           +H
Sbjct: 61  -----TGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.5 bits (161), Expect = 8e-14
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 19/82 (23%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRI------FPCHDCGKTFNSRSSQQIHQRIH 81
           C  CG+++  +  L+ H            +I      + C+ C K F  R S   H+ + 
Sbjct: 40  CGVCGKKFKMKHHLVGHM-----------KIHTGIKPYECNICAKRFMWRDS--FHRHVT 86

Query: 82  TGERPYSCRYCYKAFADGGTLR 103
           +  + Y      +   +     
Sbjct: 87  SCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELC 165
               +G+K Y C  C K+F  +     H+  H       G   + C VCG        L 
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMH------LGLRPYGCGVCGKKFKMKHHLV 54

Query: 166 QHLVQHSDE 174
            H+  H+  
Sbjct: 55  GHMKIHTGI 63

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  115 bits (289), Expect = 6e-32
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDV----IRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTG 83
            + C   +     L+ H     V              C   GK+F ++     H R+HTG
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87

Query: 84  ERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAH 137
           E+P+ C +  C K FA    L+ H+R HTGEKP+ C    C + F      ++H+  H
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 99.7 bits (249), Expect = 5e-26
 Identities = 40/158 (25%), Positives = 58/158 (36%), Gaps = 24/158 (15%)

Query: 30  DCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYS- 88
             G      +  L  K        E     P   C +TF++      H  +     P   
Sbjct: 2   SSGSSGQPIKQELSCKWID-----EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQN 56

Query: 89  --------CRYCYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHH 138
                   C    K+F     L  H RVHTGEKP+ CP   C K F +   L+ H R H 
Sbjct: 57  NHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH- 115

Query: 139 SGPESKGATTFECKVCGCM--LSSSPELCQHLVQHSDE 174
                 G   F+C+  GC    ++S +  +H+  H+ +
Sbjct: 116 -----TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 93.5 bits (233), Expect = 1e-23
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 11/95 (11%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQQIHQRIHTGE 84
           C   G+ +  +  L+ H      IR   G + FPC    CGK F    + +IH+R HTGE
Sbjct: 65  CPREGKSFKAKYKLVNH------IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118

Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC 117
           +P+ C +  C + FA+    +KH  VHT +K    
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  113 bits (286), Expect = 7e-32
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
            + C + + D  ++  H        T   R+  C +CGK F   S  + HQ +HTGE+P+
Sbjct: 10  HKGCTKMFRDNSAMRKHL------HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63

Query: 88  SCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAH 137
            C +  C K F+    LR H R+HTG++PYVCP   C+K F Q   L+ HI  H
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  106 bits (266), Expect = 8e-29
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 60  PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
           P   C K F   S+ + H   H G R + C  C KAF +   L++H+ VHTGEKP+ C  
Sbjct: 9   PHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 67

Query: 120 --CSKAFNQRVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELCQHLVQHSDE 174
             C K F+    LR H+R H       G   + C    C    + S  L  H++ H+  
Sbjct: 68  EGCGKRFSLDFNLRTHVRIH------TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 88.7 bits (221), Expect = 3e-22
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 11/95 (11%)

Query: 26  HMCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQQIHQRIHT 82
           H+C +CG+ + +   L  H+          G + F C    CGK F+   + + H RIHT
Sbjct: 35  HVCAECGKAFVESSKLKRHQ------LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT 88

Query: 83  GERPYSCRY--CYKAFADGGTLRKHERVHTGEKPY 115
           G+RPY C +  C K FA    L+ H   H   K  
Sbjct: 89  GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 112 EKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLV 169
            +   CP   C+K F     +R+H+  H       G     C  CG     S +L +H +
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-------GPRVHVCAECGKAFVESSKLKRHQL 55

Query: 170 QHSDE 174
            H+ E
Sbjct: 56  VHTGE 60

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  112 bits (283), Expect = 1e-31
 Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE--KPYV 116
             C  CGK F        H+  H+GE+PYSC  C   F     +  H R H G   KPY+
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 117 CPICSKAFNQRVVLREHIRAHHSGPES 143
           C  C K F++   L  HI+  HSGP S
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 93.7 bits (234), Expect = 1e-24
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 81  HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
            +G    +C  C K F D   L +H+  H+GEKPY CP+C   F ++  +  H+R+ H G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDG 60

Query: 141 PESKGATTFECKVCGCMLSSSPELCQHL 168
              K    + C+ CG   S    L  H+
Sbjct: 61  SVGK---PYICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 28 CEDCGEEYWDRQSLLVHKARHDVIRT-ERGRIFPCHDCGKTFNSRSSQQIH-QRIHTGER 85
          C  CG  +  +  +  H   H        G+ + C  CGK F+       H +++H+G  
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSH----DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  111 bits (281), Expect = 2e-31
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 59  FPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV 116
           + C    C + F+   S   H RIHTG++P+ CR C + F+    L  H R HTGEKP+ 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 117 CPICSKAFNQRVVLREHIRAH 137
           C IC + F +    + H + H
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 84.4 bits (210), Expect = 5e-21
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 27  MCEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
             E C   +    SL  H       R   G + F C  C + F+       H R HTGE+
Sbjct: 8   PVESCDRRFSQSGSLTRHI------RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 86  PYSCRYCYKAFADGGTLRKHERVHTGEK 113
           P++C  C + FA     ++H ++H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  112 bits (282), Expect = 2e-30
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 62  HDCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC-- 117
            DCG  +N     Q H   HTGE+P+ C+   C K F     L +H   HTGEK + C  
Sbjct: 18  ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 77

Query: 118 PICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELCQHLVQHSDE 174
             C   F  +  +++H    H+         + C    CG       +L  H   H+ +
Sbjct: 78  DGCDLRFTTKANMKKHFNRFHNIKICV----YVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (255), Expect = 1e-26
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 29  EDCGEEYWDRQSLLVHKARHDVIRT-ERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGER 85
           + C   +  + ++  H  R        +  ++ CH  +CGK F   +  ++HQ  HT + 
Sbjct: 78  DGCDLRFTTKANMKKHFNRF----HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL 133

Query: 86  PYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
           PY C    C K F+    L++HE+VH G        CS       +  +H+   H
Sbjct: 134 PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 91.9 bits (229), Expect = 1e-22
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 77  HQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC--PICSKAFNQRVVLRE 132
            + +    + Y C +  C  A+     L+ H   HTGEKP+ C    C K F     L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 133 HIRAHHSGPESKGATTFECKVCGC 156
           H   H       G   F C   GC
Sbjct: 63  HSLTH------TGEKNFTCDSDGC 80

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQQIHQRIHTG- 83
            E+CG+ +     L VH+       +      + C    C K F+  S  + H+++H G 
Sbjct: 109 FENCGKAFKKHNQLKVHQ------FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162

Query: 84  --ERPYSCRYCYKAFADGGTLRKHERVHT 110
             ++  SC +  K +     L+     H 
Sbjct: 163 PCKKDDSCSFVGKTWTL--YLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 104 KHERVHTGEKPYVC--PICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGC 156
             + +    K Y+C    C  A+N+   L+ H+  H       G   F CK  GC
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH------TGEKPFPCKEEGC 50

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  110 bits (277), Expect = 3e-30
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 20/140 (14%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCG-----KTFNSRSSQQIHQRIHT 82
            + C +E+  ++ L+ H    + I  ER + F CH  G     + F ++    +H R HT
Sbjct: 6   WDGCSQEFDSQEQLVHH-INSEHIHGER-KEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 83  GERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC--PICSKAFNQRVVLREHIRAHH 138
           GE+P+ C +  C K+++    L+ H R HTGEKPY+C    CSKAF+      +H    H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 139 SG--PESKGATTFECKVCGC 156
           S   P       + CK+ GC
Sbjct: 124 SNEKP-------YVCKLPGC 136

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  108 bits (273), Expect = 2e-29
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 26  HMCEDCGEEYWDRQ-----SLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQQIH 77
            +C   G     R       L+VH      +R   G +   C    C K+++   + + H
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVH------MRRHTGEKPHKCTFEGCRKSYSRLENLKTH 88

Query: 78  QRIHTGERPYSCRY--CYKAFADGGTLRKH-ERVHTGEKPYVCPI--CSKAFNQRVVLRE 132
            R HTGE+PY C +  C KAF++     KH  R H+ EKPYVC +  C+K +     LR+
Sbjct: 89  LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 133 HIRAHH 138
           H++  H
Sbjct: 149 HVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 99.2 bits (248), Expect = 7e-26
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 16/108 (14%)

Query: 59  FPCHDCGKTFNSRSSQQIH---QRIHTGERPYSCRYC-----YKAFADGGTLRKHERVHT 110
                C + F+S+     H   + IH   + + C +       + F     L  H R HT
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 111 GEKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGC 156
           GEKP+ C    C K++++   L+ H+R+H       G   + C+  GC
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSH------TGEKPYMCEHEGC 105

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 14/81 (17%)

Query: 84  ERPYSCRYCYKAFADGGTLRKH---ERVHTGEKPYVC-----PICSKAFNQRVVLREHIR 135
           E       C + F     L  H   E +H   K +VC         + F  + +L  H+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 136 AHHSGPESKGATTFECKVCGC 156
            H       G    +C   GC
Sbjct: 61  RH------TGEKPHKCTFEGC 75

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 63  DCGKTFNSRSSQQIHQ-RIHTGERPYSCRY--CYKAFADGGTLRKHERVHTG 111
            C K F++ S +  HQ R H+ E+PY C+   C K + D  +LRKH +   G
Sbjct: 104 GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 112 EKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQ-HLVQ 170
           E       CS+ F+ +  L  HI + H   E K    F C   GC     P   Q  LV 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERK---EFVCHWGGCSRELRPFKAQYMLVV 57

Query: 171 H 171
           H
Sbjct: 58  H 58

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  108 bits (272), Expect = 8e-30
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 63  DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC--PIC 120
           DC + F+     + HQR HTG +P+ C+ C + F+    L+ H R HTGEKP+ C  P C
Sbjct: 43  DCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC 102

Query: 121 SKAFNQRVVLREHIRAH 137
            K F +   L  H   H
Sbjct: 103 QKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 80.3 bits (199), Expect = 4e-19
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 82  TGERPYSC--RYCYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAH 137
           + +RP+ C    C K +     L+ H R HTGEKPY C    C + F++   L+ H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 138 HSGPESKGATTFECKVCGCMLSSSPELCQH 167
                  G   F+CK C    S S  L  H
Sbjct: 62  ------TGVKPFQCKTCQRKFSRSDHLKTH 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  103 bits (260), Expect = 2e-28
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           F C  C + F+       H R HTGE+P++C  C + FA     ++H  +     P +  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62

Query: 119 ICSKAFNQRVVLREHIRAH--HSG 140
              +  ++   L   +       G
Sbjct: 63  KVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 82.2 bits (204), Expect = 3e-20
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESK 144
           +P+ CR C + F+    L  H R HTGEKP+ C IC + F +    + H    H  P   
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP--- 58

Query: 145 GATTFECKVCGCMLSSSPELCQH 167
                       +LS +  L   
Sbjct: 59  ----ILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 70.6 bits (174), Expect = 6e-16
 Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 11/90 (12%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCHDCGKTFNSRSSQQIHQRIHTGERP 86
           C  C   +     L  H       RT  G + F C  CG+ F     ++ H+ I     P
Sbjct: 6   CRICMRNFSRSDHLTTHI------RTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILP 58

Query: 87  YSCRYCYKAFADGGTLRKHE---RVHTGEK 113
                  +  +    L       +   GE+
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  103 bits (260), Expect = 2e-28
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 52  RTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVH 109
           +           CGKT+   S  + H R HTGE+PY C +  C   FA    L +H R H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 110 TGEKPYVCPICSKAFNQRVVLREHIRAH 137
           TG +P+ C  C +AF++   L  H++ H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 67.6 bits (166), Expect = 9e-15
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 11/86 (12%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQ-QIHQRIHTG 83
              CG+ Y     L  H       RT  G + + C    CG  F +RS +   H R HTG
Sbjct: 10  YAGCGKTYTKSSHLKAHL------RTHTGEKPYHCDWDGCGWKF-ARSDELTRHYRKHTG 62

Query: 84  ERPYSCRYCYKAFADGGTLRKHERVH 109
            RP+ C+ C +AF+    L  H + H
Sbjct: 63  HRPFQCQKCDRAFSRSDHLALHMKRH 88

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score =  100 bits (253), Expect = 1e-27
 Identities = 26/66 (39%), Positives = 33/66 (50%)

Query: 72  SSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLR 131
                H  +   ++PY C  C  +F   G L  H+ VHTGEKPY C IC   FN+   L+
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 132 EHIRAH 137
            H R H
Sbjct: 63  THTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 93.3 bits (233), Expect = 1e-24
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
           C  C  +F  + +   H+ +HTGE+PY C  C   F     L+ H R+H+GEKPY
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score =  101 bits (253), Expect = 2e-27
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 75  QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE--KPYVCPICSKAFNQRVVLRE 132
               R H+GE+PY C  C+  F   GT++ H      E    + CP C     ++  L  
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63

Query: 133 HIRAHHSG 140
           H+R  HS 
Sbjct: 64  HLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.7 bits (195), Expect = 5e-19
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGE--RPYSCRYCYKAFADGGTLRKHER-VHTGEKPY 115
           + C+ C   F    + ++H      E    + C +C    A    L  H R  H+   P 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.6 bits (179), Expect = 7e-17
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 100 GTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLS 159
           G+     R H+GEKPY C IC   F Q   ++ HI   H+   +K    F C  C  +++
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK----FHCPHCDTVIA 56

Query: 160 SSPELCQHL 168
              +L  HL
Sbjct: 57  RKSDLGVHL 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 28 CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQR-IHTGERP 86
          C  C   +    ++ +H  +     TE    F C  C      +S   +H R  H+   P
Sbjct: 18 CYICHARFTQSGTMKMHILQKH---TENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74

Query: 87 YS 88
           S
Sbjct: 75 SS 76

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  100 bits (252), Expect = 4e-27
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 53  TERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERV 108
            E+ RI  C    C K +   S  + H R HTGE+PY C +  C   FA    L +H R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 109 HTGEKPYVCPICSKAFNQRVVLREHIRAHHS 139
           HTG KP+ C +C+++F++   L  H++ H +
Sbjct: 70  HTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 75.4 bits (186), Expect = 1e-17
 Identities = 35/109 (32%), Positives = 45/109 (41%), Gaps = 12/109 (11%)

Query: 67  TFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC--PICSKAF 124
           +  S       +RIH  + P     C K +     L+ H R HTGEKPY C    C   F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 125 NQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSD 173
            +   L  H R H       GA  F+C VC    S S  L  H+ +H +
Sbjct: 58  ARSDELTRHYRKH------TGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.1 bits (162), Expect = 3e-14
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 13/91 (14%)

Query: 26  HMCE--DCGEEYWDRQSLLVHKARHDVIRTERG-RIFPCH--DCGKTFNSRSSQ-QIHQR 79
           H C+   C + Y     L  H       RT  G + + C    C   F +RS +   H R
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHL------RTHTGEKPYKCTWEGCDWRF-ARSDELTRHYR 68

Query: 80  IHTGERPYSCRYCYKAFADGGTLRKHERVHT 110
            HTG +P+ C  C ++F+    L  H + H 
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 95  AFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC 154
           +    G   +  R+H  + P     C+K + +   L+ H+R H       G   ++C   
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTH------TGEKPYKCTWE 51

Query: 155 GCM--LSSSPELCQHLVQHSDE 174
           GC    + S EL +H  +H+  
Sbjct: 52  GCDWRFARSDELTRHYRKHTGA 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 99.1 bits (248), Expect = 8e-27
 Identities = 30/68 (44%), Positives = 33/68 (48%)

Query: 70  SRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVV 129
           S  S    +      R Y C  C K+F+    L KH R HTGEKPY C  C KAF QR  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 130 LREHIRAH 137
           L  H R H
Sbjct: 62  LIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 93.3 bits (233), Expect = 1e-24
 Identities = 27/55 (49%), Positives = 32/55 (58%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
           C +CGK+F+  S    H+R HTGE+PY C  C KAF     L  H RVHTG  P 
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 98.0 bits (245), Expect = 3e-26
 Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGE----RPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
           + C  C KTF  +    +H + +         + C  C K F    T+ +H     G   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 115 YVCPICSKAF 124
                   + 
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 95.3 bits (238), Expect = 3e-25
 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 75  QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE----KPYVCPICSKAFNQRVVL 130
               R HTGE+PY+C +C K F     L  H + +         +VC  C K F +R  +
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 131 REHIRAHHSGPESKGATTFECKVCG 155
             H           G    E +  G
Sbjct: 64  ARHADNC------AGPDGVEGENSG 82

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 GTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLS 159
           G+     R HTGEKPY C  C K F Q+ +L  H + +H    +     F C  CG   +
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD--PNFVPAAFVCSKCGKTFT 58

Query: 160 SSPELCQH 167
               + +H
Sbjct: 59  RRNTMARH 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 9/79 (11%), Positives = 16/79 (20%), Gaps = 33/79 (41%)

Query: 18 GPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIH 77
           P   PA+ +C  CG+ +  R ++                                   H
Sbjct: 40 DPNFVPAAFVCSKCGKTFTRRNTMAR---------------------------------H 66

Query: 78 QRIHTGERPYSCRYCYKAF 96
               G           + 
Sbjct: 67 ADNCAGPDGVEGENSGPSS 85

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 96.8 bits (242), Expect = 5e-26
 Identities = 32/61 (52%), Positives = 38/61 (62%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRA 136
              IH+GE+PY C  C KAF+    L +H+RVHTGEKPY C  C KAF+Q   L  H R 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 137 H 137
           H
Sbjct: 65  H 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 92.9 bits (232), Expect = 2e-24
 Identities = 25/55 (45%), Positives = 32/55 (58%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
           C +CGK F+  S    HQR+HTGE+PY C  C KAF+    L  H+R+HT     
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 64.4 bits (158), Expect = 8e-14
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 102 LRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS 161
                 +H+GEKPY C  C KAF++  +L +H R H       G   ++C  CG   S +
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH------TGEKPYKCLECGKAFSQN 55

Query: 162 PELCQHLVQHSDE 174
             L  H   H+  
Sbjct: 56  SGLINHQRIHTSG 68

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 96.5 bits (241), Expect = 8e-26
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 59  FPC--HDCGKTFNSRSSQQIHQRI-HTGERPYSC--RYCYKAFADGGTLRKHERVHTGEK 113
            PC    CG+ F++R     H++  H  ++ +SC    C K+F     L++H ++H+  +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 114 PYVCPICSKAF 124
            Y+C     + 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 79.1 bits (196), Expect = 3e-19
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 11/81 (13%)

Query: 81  HTGERPYSCRY--CYKAFADGGTLRKHERV-HTGEKPYVCP--ICSKAFNQRVVLREHIR 135
            +G     C +  C + F++   L  H++  H  +K + CP   C K+FN +  L+EH++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 136 AHHSGPESKGATTFECKVCGC 156
            H           + C+  G 
Sbjct: 62  LH------SDTRDYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 20/78 (25%)

Query: 28 CEDCGEEYWDRQSLLVHKARHDVIRTERGRI-------FPC--HDCGKTFNSRSSQQIHQ 78
             CG  + +RQ L  HK           +        F C    CGK+FN +   + H 
Sbjct: 12 FPGCGRIFSNRQYLNHHK-----------KYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 79 RIHTGERPYSCRYCYKAF 96
          ++H+  R Y C +   + 
Sbjct: 61 KLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 50.6 bits (122), Expect = 7e-09
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 13/72 (18%)

Query: 109 HTGEKPYVCPI--CSKAFNQRVVLREHIRAHHSG--PESKGATTFECKVCGC--MLSSSP 162
            +G     C    C + F+ R  L  H +  H            F C    C    +   
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-------FSCPEPACGKSFNFKK 54

Query: 163 ELCQHLVQHSDE 174
            L +H+  HSD 
Sbjct: 55  HLKEHMKLHSDT 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 93.4 bits (233), Expect = 1e-24
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 78  QRIHTGERPYSCRYCYKAFADGGTLRKHERV--HTGEKPYVCPICSKAFNQRVVLREHIR 135
           +    GE  Y C+ C + +       +H         K Y CP C K F ++  +  H++
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 136 AHH 138
             H
Sbjct: 62  IIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.9 bits (172), Expect = 7e-16
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 52  RTERG-RIFPCHDCGKTFNSRSSQQIHQRI--HTGERPYSCRYCYKAFADGGTLRKHERV 108
            T+ G   + C  C + +   S+   H         + Y C +C+K F     +  H ++
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 109 HTG 111
              
Sbjct: 63  IHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 4/66 (6%)

Query: 106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELC 165
           E    GE  Y C +CS+ +        H    H     +    + C  C    +    + 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH----KRNVKVYPCPFCFKEFTRKDNMT 57

Query: 166 QHLVQH 171
            H+   
Sbjct: 58  AHVKII 63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 93.8 bits (234), Expect = 1e-24
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 58  IFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEK 113
           ++ CH  +CGK F   +  ++HQ  HT + PY C +  C K F+    L++HE+VH G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 114 PYVCPICSKAFNQRVVLREHIRAHH 138
                 CS       +  +H+   H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAECH 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 86.0 bits (214), Expect = 7e-22
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP 118
           C +C  + +S+++ +IH+RIH  +RP+ C YC         L KH +   G+      
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 85.2 bits (212), Expect = 1e-21
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
              +   P  C  C  + +    LR HER+H  ++P+ C  CS    Q   L +H++  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 81.7 bits (202), Expect = 3e-20
 Identities = 13/67 (19%), Positives = 19/67 (28%), Gaps = 3/67 (4%)

Query: 81  HTGERPYSCRYCYKAFADGGTLRKHERVHT---GEKPYVCPICSKAFNQRVVLREHIRAH 137
            +G     C  C        +L  H+R H        + C  C K F +   +  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 138 HSGPESK 144
           H      
Sbjct: 62  HPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 69.4 bits (170), Expect = 1e-15
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 3/67 (4%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHT---GERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
             C  CG T   ++S   HQR H        + C +C K F    ++  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 116 VCPICSK 122
                S 
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.8 bits (140), Expect = 3e-11
 Identities = 16/75 (21%), Positives = 23/75 (30%), Gaps = 3/75 (4%)

Query: 109 HTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHL 168
            +G     C IC     Q+  L  H R H    E+  A  F C+ CG        +  H 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKH---AETVAALRFPCEFCGKRFEKPDSVAAHR 58

Query: 169 VQHSDENTAKNRVVP 183
            +         +   
Sbjct: 59  SKSHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
            CE CG     + SL  H+ +H          FPC  CGK F    S   H+       
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAA--LRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 86 PYSCR 90
            + +
Sbjct: 66 LLAPQ 70

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 77.1 bits (191), Expect = 9e-19
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHE-RVHTGEK 113
           F C  C + F  +   + H R HT E+PY C  C +AF     L +H  ++H+G  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
           R + C  C +AFA    L++H R HT EKPY C +C++AF +R +L  H +  HSG
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 76.0 bits (188), Expect = 2e-18
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGERPY C  C KAF D   L KH+++HTGEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK F  RS+   HQ+IHTGE+P   
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGE+PY+C +C KAF  R  L +H + H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 75.6 bits (187), Expect = 2e-18
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TGE+PY C  C KAF+   +L +H+RVH+GEKP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  C K F+  +S   HQR+H+GE+P   
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C +C KAF+    L +H R H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 75.6 bits (187), Expect = 3e-18
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TGE+PY C  C KAF+   +L  H+R+H+G+KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK F+ R S  +HQRIH+G++P   
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C +C KAF+ R  L  H R H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 75.3 bits (186), Expect = 4e-18
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TG++P+ C +C K+F   G L  H+R+HTGEK    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C  CGK+F ++ +   HQRIHTGE+    
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TG+KP+ C  C K+F  +  L  H R H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 75.3 bits (186), Expect = 4e-18
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 +GE+PY C  C K F+    L  H+R HTGEKP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-11
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGKTF+ +S    HQR HTGE+P   
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GEKPY C  C K F+Q+ +L  H R H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 75.2 bits (186), Expect = 4e-18
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TGE+PY C  C KAF     L  H+R HTGE     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.1 bits (139), Expect = 1e-11
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++C K FN++S+  +HQR HTGE   S 
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 16/33 (48%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C KAFN +  L  H R H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.9 bits (185), Expect = 5e-18
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF D   L  H+++HTGEKP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  RS+   HQ+IHTGE+P   
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C KAF  R  L  H + H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 74.5 bits (184), Expect = 6e-18
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY+C+ C K+F     L KH+RVH+GEKP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 55.3 bits (134), Expect = 9e-11
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK+F   S    HQR+H+GE+P   
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C K+F     L +H R H
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.9 bits (185), Expect = 6e-18
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TGE+PY C  C K+F     L  H+++HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK+F  +S   +HQ+IHTGE+P   
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C IC K+F ++  L  H + H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY+C  C KAF     L++H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F   S  Q HQRIHTGE+P   
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF     L+EH R H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TGE+PY C  C K +     L  H++VHTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK +NS+ +  +HQ++HTGERP   
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K +N +  L  H + H
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 TG +PY C  C KAF+    L +H+RVHTGEKP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F+  S    HQR+HTGE+P   
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TG KPY C  C KAF+Q   L  H R H
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF+   +L  H+ +HTG+KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C+ CGK F+ RSS   HQ IHTG++P   
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF+ R  L  H   H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+PY C YC KAF     L +H+R+HTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSCR 90
          C  CGK F   +    HQRIHTGE+P    
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GEKPYVC  C KAF     L  H R H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 74.5 bits (184), Expect = 7e-18
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C K+F+    L  H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK+F+  S    HQRIHTGE+P   
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKP+ C  C K+F+    L  H R H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 8e-18
 Identities = 20/41 (48%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAFA    L +H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  +++   HQRIHTGE+P   
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C KAF Q+  L +H R H
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 74.4 bits (184), Expect = 8e-18
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG +PY C  C KAF     L  H R HTGE     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.3 bits (137), Expect = 3e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F S+S   IH R HTGE   S 
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TG KPYVC  C KAF  +  L  H R H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 8e-18
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF     L KH+++HT +KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  RS+   HQ+IHT ++P   
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY+C  C KAF  R  L +H + H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.5 bits (184), Expect = 9e-18
 Identities = 19/41 (46%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGER Y C  C KAF    TL  H+R+H GEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  +S+  +HQRIH GE+P   
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGE+ Y C  C KAF Q+  L  H R H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.2 bits (183), Expect = 9e-18
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF D  +  +H+R+HTG++P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F   SS   HQR+HTG+RP   
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C KAF       +H R H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF     L  H++ HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 3e-11
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C DCGK F  +S   IHQ+ HTGER    
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF ++  L  H ++H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG + + C  C KAF    TL  H+++HTGEKP   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F  +S+  +HQ+IHTGE+P   
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TG K + C  C KAF ++  L  H + H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 21/41 (51%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGER Y C  C KAFA   TL  H+R+HTGEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  +S+  +HQRIHTGE+P   
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGE+ Y C  C KAF ++  L  H R H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C KAF+D   L +H R+HTGEKP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C DCGK F+       H+RIHTGE+P   
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKP+ C  C KAF+  + L +H R H
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+ Y+C+ C K+F+    L KHER+H+GEKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK+F+       H+R+H+GE+P   
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEK Y C  C K+F++   L +H R H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG +PY C  C KAF+   +L  H+ +HTGEKP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F+  SS   HQ IHTGE+P   
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TG KPY+C  C KAF+    L  H   H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 1e-17
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C+ C KAF     L +H++ HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  C K F  ++    HQ+ HTGE+P   
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C +CSKAF Q+  L +H + H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 1e-17
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF    +L  H+  H+GEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F +RSS  IHQ  H+GE+P   
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF  R  L  H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 73.7 bits (182), Expect = 1e-17
 Identities = 18/41 (43%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L  H  VHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F  R     H  +HTGE+P   
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C K F  R  L  H   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 2e-17
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K+F     LR H++ HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C DCGK+F  +S  +IHQ+ HTGER    
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C K+F  +  LR H + H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 2e-17
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE PY C  C KAF+    L  H+R H GEKP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          CH+CGK F+ +     HQR H GE+P   
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGE PY C  C KAF+++  L  H R H
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 2e-17
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K+F     L  H+R+HTGE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C DCGK+F  +S   +HQRIHTGE P   
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K+F ++  L  H R H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 73.7 bits (182), Expect = 2e-17
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+P+ C  C K F        H+R H+GEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F + S    HQR H+GE+P   
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GEKP+ C  C K F        H R+H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C K F+    L  H ++HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F+ RS+  +H ++HTGE+P   
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKP+ C  C K F++R  L  H + H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C KAF     L  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +C K FN++S+  +HQR HTGE+P   
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKP+ C  C KAFN +  L  H R H
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+PY C  C K +     L  H+RVHTGEK    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK +  R     HQR+HTGE+    
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GEKPY C  C K + +R+ L  H R H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ CR C K+F+    L  H+R+HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK+F+  S   +HQRIHTGE P   
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKP+ C  C K+F+    L  H R H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE P+ C  C K F     L  H+++HTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 2e-11
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F  +++  IHQ+IHTGERP   
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGE P++C  C K F  +  L  H + H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 19/41 (46%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG+RPY C  C KAF    +L  H R HTGEKP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F ++SS   H+R HTGE+P   
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TG++PY C  C KAF  +  L  H R+H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF+    L +H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F+  S    HQRIHTGE+P   
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF+Q   L  H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C+K+F  G +L  H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  C K+F   SS  +HQRIHTGE+P   
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C +C K+F     L  H R H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C K+F     L +H  VHT EKP   
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C  CGK+F  RS    H  +HT E+P   
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKP+ C IC K+F  R  L  H   H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 2e-17
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+P+ C  C K F     L  H+RVHTGEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F   S    HQR+HTGE+P   
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GEKP+ C  C K F Q   L  H R H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 3e-17
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C KAF     L  H+ +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F + S+   HQ IHTGE+P   
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C KAF     L  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 3e-17
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K+F     L +H R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK+F  +S    H+RIHTGE+P   
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY+C  C K+F Q+  L  H R H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 3e-17
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                + E+PY C  C K +     L  H+RVH GEK    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C DCGK +N R +  +HQR+H GE+    
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                + EKPY C  C K +N+R+ L  H R H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 3e-17
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PYSC  C KAF     L +H RVHT E     
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C +C KAF     L +H+R H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C+ CGK F   +    H R+HT E     
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 72.9 bits (180), Expect = 3e-17
 Identities = 20/41 (48%), Positives = 25/41 (60%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C+ C KAF+    L +H+RVHTGEKP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSCR 90
          C +CGK F+  +    HQR+HTGE+P    
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C KAF+Q   L +H R H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.6 bits (179), Expect = 3e-17
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 76  IHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                  GE+ Y C  C K F+    L+ H+RVHTGEKP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK F+  S  Q HQR+HTGE+P   
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEK Y C +C K F+Q   L+ H R H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 72.6 bits (179), Expect = 4e-17
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG +PY C  C K F+    L  H+R HTG KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          + C  C KTF+ +S   +HQR HTG +P   
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TG KPY C  C+K F+ +  L  H R+H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 5e-17
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L  H+R+HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    HQRIHTG +P   
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K F Q   L  H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 5e-17
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L +H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    HQRIHTGE+P   
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C K F     L  H R H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 6e-17
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 GE+PY C  C KAF+    L  H R H+GEKP   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F+S+S   IH R H+GE+P   
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEKPY C  C KAF+ +  L  H+R H
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 6e-17
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C+ C KAF     L +H  VH+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  CGK F   S    H  +H+GERP   
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C +C KAF     L +H   H
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+P+ C  C K F     L  H+RVHTGEKP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F   S    HQR+HTGE+P   
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GEKP+ C  C K F Q   L  H R H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+ Y C  C K F+    L +H+++HTGEKP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F+  S    HQ+IHTGE+P   
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEK Y C  C K F++   L +H + H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 G++ + C  C K F    +L  H+R+HTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++C KTF   SS  +HQRIHTGE+P   
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 G+K + C  C K F Q   L  H R H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 72.2 bits (178), Expect = 7e-17
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHE-RVHTGEKPYVCPICSKAFNQ 126
                +  +PY C+ C K F+    L  H  +VHT E+P+ C +     + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 59 FPCHDCGKTFNSRSSQQIH-QRIHTGERPYSCRYCYKAFADG 99
          + C  CGK F+       H +++HT ERP+ C+      + G
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.7 bits (135), Expect = 8e-11
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 9/53 (16%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG--PESKGATTFECKVCG 155
                +  KPY+C  C K F++   L  HI+  H+   P        +C+V  
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-------HKCQVWV 48

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C  C K++     L +H+RVHTGEKP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK++N R     HQR+HTGE+P   
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKP+ C  C K++NQRV L +H R H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 8e-17
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+P+ C+ C KAF     L  H R+HTGEKP   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CGK F        H RIHTGE+P   
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GEKP+ C  C KAF Q + L  H+R H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 8e-17
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TG++PY C  C K F     L +H  +HTGEKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    H+ IHTGE+P   
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TG+KPY C  C K F Q   L  H   H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 9e-17
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGERP+ C  C K+F     L +H+R+HTGEKP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 46 ARHDVIRT-ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
                 T ER     C++CGK+F   +    HQRIHTGE+P   
Sbjct: 1  GSSGSSGTGERP--HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGE+P+ C  C K+F Q   L +H R H
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.7 bits (177), Expect = 9e-17
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L +H  +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    H+ IHTGE+P   
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKPY C  C K F Q   L  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 9e-17
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L +H RVHTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    H+R+HTG +P   
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K F Q   L  H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+PY C  C KAF     L +H R+HTG +P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F+  +    H+RIHTG RP   
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GEKPY C  C KAF++   L EH R H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L +H  +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    H+ IHTGE+P   
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 14/34 (41%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K F Q   L  H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 73.3 bits (179), Expect = 1e-16
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 1/104 (0%)

Query: 69  NSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRV 128
           +S SS +++  I TG   + C+ C  A+     L  H    TG              +R 
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRW 60

Query: 129 VLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHS 172
                        +       +C  CG    S  +L  H+++  
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 62.9 bits (152), Expect = 9e-13
 Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 10/106 (9%)

Query: 38  RQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRI-----HTGERPYSCRYC 92
             S  ++ +            F C DC   +++     +H               +    
Sbjct: 4   GSSGKLYGSIF-----TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPK 58

Query: 93  YKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
             +     +L + E     +K   C  C  +F     L  H+    
Sbjct: 59  RWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.0 bits (116), Expect = 9e-08
 Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 2/90 (2%)

Query: 28  CEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY 87
           C+DC   Y     L VH       R +       +    +   + S    +     ++  
Sbjct: 22  CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81

Query: 88  SCRYCYKAFADGGTLRKH--ERVHTGEKPY 115
            C YC  +F     L  H  +  H  +   
Sbjct: 82  KCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+PY C  C K F     L +H+ +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 46 ARHDVIRT-ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
                 T E+   + CH+CGK F   S    HQ IHTGE+P   
Sbjct: 1  GSSGSSGTGEKP--YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 TGEKPY C  C K F +   L  H   H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 71.0 bits (175), Expect = 1e-16
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+PY C  C KAF     L  HER H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 7e-11
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F  +S   +H+R H G    S 
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GEKPY C  C KAF  + +L  H R H
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 71.1 bits (175), Expect = 1e-16
 Identities = 18/39 (46%), Positives = 21/39 (53%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
                 GE+PY C  C KAF+  G+L  H RVHTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEKPY C  C KAF+Q+  L  HIR H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 6e-10
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          C  CGK F+ + S  +H R+HTG  P S
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 71.0 bits (175), Expect = 1e-16
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 GE+ + CR C   F+   +LR H+ VH GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +C   F+  SS ++HQ +H GE+P   
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEK + C  C   F+Q   LR H   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 1e-16
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+PY C  C K F     L  H R+HTGEKP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F   S    H RIHTGE+P   
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GEKPY C  C K F Q   L  H R H
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GERPY C  C K F     L +H + H  EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          + C++CGK F   S    H + H  E+    
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                +GE+PY C  C K F +   L EH++ H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +G++PY C+ C K F   G L +H+RVHTGE+    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +C KTF        H+R+HTGER    
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +G+KPY C  C K F Q   L +H R H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 69.8 bits (172), Expect = 3e-16
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
                 GE+PY C  C   F    TL+ H R+HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEKPY C IC   F     L+ H+R H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          +PC  CG  F    + + H RIHTG  P S
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 69.9 bits (172), Expect = 4e-16
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHER-VHTGEKPYVCP 118
                TG++PY C  C KAF    +L +H R  HTGEKP    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
                TG+KPY C  C KAF Q   L  H R +H+G
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 49.9 bits (120), Expect = 7e-09
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 61 CHDCGKTFNSRSSQQIHQR-IHTGERPYSC 89
          C +CGK F   +S   H R  HTGE+P   
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.4 bits (173), Expect = 5e-16
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 71  RSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRV 128
                +   +    RPY+C    C + F+    L +H R+HTG+KP+ C IC + F++  
Sbjct: 4   HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 129 VLREHIRAH 137
            L  HIR H
Sbjct: 64  HLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 59  FPCH--DCGKTFNSRSSQ-QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHT 110
           + C    C + F SRS +   H RIHTG++P+ CR C + F+    L  H R HT
Sbjct: 20  YACPVESCDRRF-SRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 69.5 bits (171), Expect = 6e-16
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 G  PY C  C K+F+    L  H+R+HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C  C K+F+ +    +HQR+HT E+P   
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 G  PY C  C K+F+ ++ L  H R H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.2 bits (170), Expect = 7e-16
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P+ C+ C   F+   +L KH R H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKP+ C  C   F+    L +H+R+H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C +CG  F+   S   H R H    P   
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.4 bits (168), Expect = 1e-15
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P  C  C KAF     L  H+R H  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.3 bits (134), Expect = 8e-11
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
            C +CGK F  +S   +HQR H  ++    
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                TGEKP  C  C KAF  +  L  H R H
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 GER + C  C K F       +H R+HTGEKP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
            C DCGK F   S+   H+RIHTGE+P   
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                  GE+ + C  C K F Q     +H R H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GERP+ C  C K F     L  H R+H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C++CGK F  RS    H R+H+ E+    
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +GE+P+ C  C K F +R  L  H+R H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                 GE+PY C  C K+F+    L +H   HT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK+F+       H   HT E+P   
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                  GEKPY C  C K+F+    L +H   H
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 14/39 (35%), Positives = 16/39 (41%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
                 GE+PY C  C   F     LR H  +HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GEKPY C  C   F Q   LR H+  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.2 bits (121), Expect = 4e-09
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          C  CG  F   +  + H  IHTG  P S
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +GE+ ++C  C K F     LR H+RVH GEK    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F   S+ +IHQR+H GE+    
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH----HSGPES 143
                +GEK + C  C K F     LR H R H     SGP S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 66.0 bits (162), Expect = 8e-15
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 78  QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
               +GE PY C  C KAF     L  H+R H GE     
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK FN +     HQR H GE   S 
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
               +GE PY C  C KAFN++  L  H R H
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE PY C  C K F+    L  H++ H+G+     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C +CGK F+ +     HQ+ H+G+   S 
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH--HSGPES 143
                 TGE PY C  C K F+++  L  H + H   SGP S
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                +  + + C  C + F     L +H+R+HTGEKP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          CH+CG+ F  +S    HQRIHTGE+P   
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 +  K + C  C + F  +  L +H R H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.1 bits (157), Expect = 5e-14
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
                T  + Y+C  C KAF     L +H+++HT +     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 T  K Y C  C KAF +   L  H + H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          C++CGK F        HQ+IHT +   S 
Sbjct: 15 CNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 64.7 bits (158), Expect = 6e-14
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 71  RSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC--PICSKAFNQ 126
            S     Q   +  R + C +  C K +     L+ H R HTGEKP+ C    C + F +
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 127 RVVLREHIRAH 137
              L  H R H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 52  RTERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHER 107
            + R R   C    CGKT+   S  + H R HTGE+P+SC +  C + FA    L +H R
Sbjct: 11  DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

Query: 108 VH 109
            H
Sbjct: 71  TH 72

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 78  QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
               +GE+P+ C  C KAF+    L  H++ H  EKP   
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          F C  C K F+S+S   +HQ+ H  E+P   
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
               +GEKP+ C  C KAF+ +  L  H + H
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 62.7 bits (153), Expect = 1e-13
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
                 GE PY C  C K+F   G+L  H+R  +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          + C  CGK+F  R S  +HQR  +   P S
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                 GE PY+C  C K+F QR  L  H R+ 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 78  QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY 115
               +G+R Y C+ C K+F   G+L  HER+HTG  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 54.9 bits (133), Expect = 9e-11
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 61 CHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          C +CGK+F  + S  +H+RIHTG  P S
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
               +G++ Y C  C K+F Q+  L  H R H
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 61.7 bits (149), Expect = 6e-13
 Identities = 20/53 (37%), Positives = 24/53 (45%)

Query: 61  CHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           C +CG      S  + H R HT  RPY C YC  +F   G L KH +     K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 87  YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           Y C  C         L+KH R HT  +PY C  C+ +F  +  L +H+++ 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 26 HMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
          ++CE+CG        L  H   H  +R      + C  C  +F ++ +   H +     +
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRP-----YHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE 174
           Y+C  C     +  +L++HIR H           + C  C     +   L +H+   +  
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTH------TDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 61.2 bits (149), Expect = 6e-13
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 77  HQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVC 117
                TGE+P++C +  C   F+    L +H R H+G KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 105 HERVHTGEKPYVC--PICSKAFNQRVVLREHIRAH 137
                TGEKP+ C  P C   F++   L  H R+H
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)

Query: 59 FPCH--DCGKTFNSRSSQ-QIHQRIHTGERPYSC 89
          F C    CG  F SRS +   H+R H+G +P   
Sbjct: 13 FACTWPGCGWRF-SRSDELSRHRRSHSGVKPSGP 45

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 59.3 bits (143), Expect = 6e-12
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 70  SRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVV 129
           S  S    Q+IH G+R   C  C   F             +  K  +C  C K   Q   
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAA 54

Query: 130 LREHIRAHHSGPESKGATT 148
           L +      SG ++ G ++
Sbjct: 55  LNKDEGN-ESGKKTSGPSS 72

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.9 bits (129), Expect = 5e-10
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 8/70 (11%)

Query: 46  ARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKH 105
            +   I     R   C  CG  F  RS+        +  +   C  C K       L K 
Sbjct: 7   GKRQKIHLGD-RSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKD 58

Query: 106 ERVHTGEKPY 115
           E   +G+K  
Sbjct: 59  EGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 100 GTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLS 159
           G+  K +++H G++   C  C   F +R  L                 T  C+ C     
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------------KTPMCEKCRKDSC 50

Query: 160 SSPELCQHLVQHSDENTA 177
               L +     S + T+
Sbjct: 51  QEAALNKDEGNESGKKTS 68

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 59.6 bits (144), Expect = 7e-12
 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 9/68 (13%)

Query: 59  FPCHDCGKTFNSRSSQQIH-QRIHTGERPYSCRYCY--------KAFADGGTLRKHERVH 109
            P   C +TF++      H    H G    +   CY        K+F     L  H RVH
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 110 TGEKPYVC 117
           TGEK    
Sbjct: 86  TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 54.6 bits (131), Expect = 5e-10
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 23 PASHMCEDCGEEYWDRQSLLVHKARHDVIRTERG----RIFPCHDCGKTFNSRSSQQIHQ 78
            S   + C   +     L+ H     V   E+         C   GK+F ++     H 
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 79 RIHTGERPYSC 89
          R+HTGE+    
Sbjct: 83 RVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 50.7 bits (121), Expect = 1e-08
 Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 9/67 (13%)

Query: 80  IHTGERPYSCRYCYKAFADGGTLRKH-ERVHTGEKPYV--------CPICSKAFNQRVVL 130
           I   +     + C + F+    L  H    H G             CP   K+F  +  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 131 REHIRAH 137
             HIR H
Sbjct: 79  VNHIRVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 108 VHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATT---FECKVCGCMLSSSPEL 164
           +   +       C + F+    L  H+   H G   +        EC   G    +  +L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 165 CQHLVQHSDE 174
             H+  H+ E
Sbjct: 79  VNHIRVHTGE 88

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC 117
              +GE+PYSC  C + F+D   L +H+++HT +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.9 bits (112), Expect = 7e-08
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSC 89
          + C +C +TF+  +    HQ++HT +   S 
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.2 bits (105), Expect = 7e-07
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAH--HSGPES 143
              +GEKPY C  C + F+    L +H + H   SGP S
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 57.3 bits (137), Expect = 1e-10
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 68  FNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQR 127
               SS             + C  C   F+   +L++H R    E   VCP+C K F   
Sbjct: 56  LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113

Query: 128 VVLREHIRAHHSG 140
               +H+   H+ 
Sbjct: 114 DSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.9 bits (110), Expect = 6e-07
 Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 12/112 (10%)

Query: 64  CGKTFNSRSSQQIHQRIHTGERPYSC----RYCYKAFADGGTLRKHERVHTGEKPYVCPI 119
                     ++ HQ     +R                D  +             +VCP+
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 120 CSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQH 171
           C   F+  V L++HIR            T  C VC    +S+     H+ + 
Sbjct: 80  CLMPFSSSVSLKQHIRYTEH--------TKVCPVCKKEFTSTDSALDHVCKK 123

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 78  QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICS 121
                  +  +C  C K F D   L +H+  H+GEKPY     S
Sbjct: 4   GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.5 bits (110), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYC 92
          +   C  CGK F        H+  H+GE+PYS    
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 57  RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV 116
            ++ C  C    +S   Q  H+R+        C YC   F      ++HE      K   
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLT 71

Query: 117 CPICSKAFNQRVVLREHIRAHHS 139
           C  C + F     +  H    H+
Sbjct: 72  CLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.8 bits (110), Expect = 4e-07
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 83  GERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPE 142
            +  Y CR C    +       HER+       VCP CS  F    + +EH         
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKK- 69

Query: 143 SKGATTFECKVCGCMLSSSPELCQHLVQHSDENT 176
                   C  C     SS  + +H V+  ++N 
Sbjct: 70  ------LTCLECMRTFKSSFSIWRHQVEVHNQNN 97

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 48.6 bits (115), Expect = 2e-08
 Identities = 16/29 (55%), Positives = 22/29 (75%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           +PY C +C + FAD G L++H R+HTGEK
Sbjct: 2   KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.9 bits (114), Expect = 4e-08
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKP 114
                 GE P+ C  C + F     L +HER H  +  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.5 bits (100), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
                  GE P+ C  C + F QR  L +H R H
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYS 88
          F C  C + F  R+    H+R H  +   S
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKSGPS 42

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
             R  TG KP+ CP C ++F++   L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.9 bits (104), Expect = 8e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVH 109
             R  TG +P+ C  C ++F+    L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKH-ERVHTG---EKPYVCPICSKAFNQRVVLRE 132
           +Q+    E  Y C+YC     D      H +  H        YVC  C+    +   L E
Sbjct: 9   NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68

Query: 133 HIRAHHSGPES 143
           H   +H G E+
Sbjct: 69  HNLKYHPGEEN 79

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 102 LRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS 161
              +++    E  Y C  C+       +   H+ + H  P     +++ C  C  +    
Sbjct: 6   HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEH--PNVVLNSSYVCVECNFLTKRY 63

Query: 162 PELCQH-LVQHSDENTAKNRVV 182
             L +H L  H  E   K  +V
Sbjct: 64  DALSEHNLKYHPGEENFKLTMV 85

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           R + C  C +AFA    L++H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.4 bits (82), Expect = 9e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 51 IRTERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGER 85
          +   + +   CH   CGK +   S  + H R HTGER
Sbjct: 1  MDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	295
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.76
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.67
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.44
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.39
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.32
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.2
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.17
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.14
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.99
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.96
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.96
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.93
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.92
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.9
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.89
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.87
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.87
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.87
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.86
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.83
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.83
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.83
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.81
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.72
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.71
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.7
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.63
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.62
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.5
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.49
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.49
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.45
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.44
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.39
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.32
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.27
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.26
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.21
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.18
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.13
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.11
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.09
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.08
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.07
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.07
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.06
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.04
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.04
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.0
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.97
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.97
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.2
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.96
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.96
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.95
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.94
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.94
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.16
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.14
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.12
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.11
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.02
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.81
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.78
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.77
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.7
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.69
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.66
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.58
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.76
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.58
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.55
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.11
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.61
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.54
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.42
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.22
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.06
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.36
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.04
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	88.84
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.24
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.67
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	86.86
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.77
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.63
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	85.17
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	85.08
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	83.84
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.14
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.08
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.08
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	81.42
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.03

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.2e-36  Score=243.59  Aligned_cols=174  Identities=34%  Similarity=0.703  Sum_probs=146.2

Q ss_pred             CCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccC
Q psy17050         18 GPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFA   97 (295)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   97 (295)
                      ....++++|.|..|++.|.+...|..|++.|+     +.++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.
T Consensus        14 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A           14 ALEPGEKPYACPECGKSFSRSDHLAEHQRTHT-----GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             -----------------CCSSHHHHHGGGCC--------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             hhcCCCCCCcCCCCccccCCHHHHHHHHHHcC-----CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccC
Confidence            34566789999999999999999999999985     6789999999999999999999999999999999999999999


Q ss_pred             ChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCCc
Q psy17050         98 DGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENTA  177 (295)
Q Consensus        98 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  177 (295)
                      +...|..|++.|+++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|++.|.+...|..|+++|+++.  
T Consensus        89 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~--  160 (190)
T 2i13_A           89 QRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT------GEKPYKCPECGKSFSREDNLHTHQRTHTGEK--  160 (190)
T ss_dssp             CHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHHHHHCCC--
T ss_pred             CHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC------CCCCeECCCCCcccCCHHHHHHHHHhcCCCC--
Confidence            99999999999999999999999999999999999999997      7899999999999999999999999999874  


Q ss_pred             CCCCCCCCccchhhhhccCCCCCCCCCC
Q psy17050        178 KNRVVPTAPRKYKRRRKLLPHEGDGFPD  205 (295)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  205 (295)
                       .+.|+.|++.|..+..|..|++.|+.+
T Consensus       161 -~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          161 -PYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             -CEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             -CeECCCCCCccCCHHHHHHHHHhcCCC
Confidence             577999999999999999999998754

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=4.8e-33  Score=224.05  Aligned_cols=170  Identities=28%  Similarity=0.481  Sum_probs=153.2

Q ss_pred             CCCCCCCceec--ccchhhccCHHHHHHHHHhcccccCCCCccccc--cccccccCChHHHHHHHHHhcCCCCcccc--c
Q psy17050         18 GPPASPASHMC--EDCGEEYWDRQSLLVHKARHDVIRTERGRIFPC--HDCGKTFNSRSSQQIHQRIHTGERPYSCR--Y   91 (295)
Q Consensus        18 ~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~   91 (295)
                      ..+...++|.|  ..|++.|.+...|..|++.|.     ++++|.|  ..|++.|.+...|..|+++|+++++|.|.  .
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~-----~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   79 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHT-----GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG   79 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHH-----CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSS
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcC-----CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCC
Confidence            44566789999  689999999999999999995     7789999  88999999999999999999999999999  8


Q ss_pred             chhccCChHhHHHHH-HHh-CCCCcccC--cchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc--CccccCCHHHHH
Q psy17050         92 CYKAFADGGTLRKHE-RVH-TGEKPYVC--PICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELC  165 (295)
Q Consensus        92 C~~~f~~~~~L~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~  165 (295)
                      |++.|.+...|..|+ ..| .++++|.|  ..|++.|.+...|..|+++|+      ++++|.|++  |++.|.+...|.
T Consensus        80 C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~~~C~k~F~~~~~L~  153 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT------QQLPYECPHEGCDKRFSLPSRLK  153 (190)
T ss_dssp             CCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS------SSCSSBCCSSSCCCBCSSHHHHH
T ss_pred             CCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC------CCCCccCCCCCCCchhcCHHHHH
Confidence            999999999999999 556 36789999  889999999999999999997      789999988  999999999999


Q ss_pred             HHHhhccCCCCcCCCCCCC---CccchhhhhccCCCCCCCCC
Q psy17050        166 QHLVQHSDENTAKNRVVPT---APRKYKRRRKLLPHEGDGFP  204 (295)
Q Consensus       166 ~H~~~h~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~~~  204 (295)
                      .|+++|++      +.|..   |++.|.+...|..|++.|+.
T Consensus       154 ~H~~~H~~------~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          154 RHEKVHAG------YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             HHHTSSCS------CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             HHHHHhCC------CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            99999987      55666   99999999999999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=6.6e-32  Score=217.36  Aligned_cols=145  Identities=38%  Similarity=0.804  Sum_probs=133.8

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChH
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGG  100 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  100 (295)
                      .++++|.|..|++.|.+...|..|++.|+     +.++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+..
T Consensus        45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  119 (190)
T 2i13_A           45 TGEKPYKCPECGKSFSDKKDLTRHQRTHT-----GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA  119 (190)
T ss_dssp             ---CCEECTTTCCEESSHHHHHHHHHHHH-----CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHH
T ss_pred             CCCCCccCCCcCchhCCHHHHHHHHHhcC-----CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHH
Confidence            45689999999999999999999999996     6789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCCCC
Q psy17050        101 TLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDENT  176 (295)
Q Consensus       101 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  176 (295)
                      .|..|++.|+++++|.|++|++.|.+...|..|++.|+      ++++|.|++|++.|.+...|..|+++|+++++
T Consensus       120 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          120 HLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT------GEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH------CCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             HHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC------CCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999997      78999999999999999999999999998764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=2.7e-28  Score=189.67  Aligned_cols=143  Identities=29%  Similarity=0.582  Sum_probs=128.7

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcccccCCCCcccccccc-----ccccCChHHHHHHHHHhcCCCCccccc--chhc
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDC-----GKTFNSRSSQQIHQRIHTGERPYSCRY--CYKA   95 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~   95 (295)
                      +.+|+|..|++.|.+...|..|++.++..  .+.++|.|.+|     ++.|.+...|..|++.|+++++|.|.+  |++.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h--~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIH--GERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSS--SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccC--CCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc
Confidence            35799999999999999999999842211  36678888753     499999999999999999999999986  9999


Q ss_pred             cCChHhHHHHHHHhCCCCcccCcc--hhhhcCCHHHHHHHH-HHhcCCCCCCCCcceecCc--CccccCCHHHHHHHHhh
Q psy17050         96 FADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHI-RAHHSGPESKGATTFECKV--CGCMLSSSPELCQHLVQ  170 (295)
Q Consensus        96 f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~  170 (295)
                      |.+...|..|++.|+++++|.|++  |++.|.+...|..|+ +.|.      ++++|.|.+  |++.|.+...|..|+++
T Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~------~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A           79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS------NEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             CSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC------SCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC------CCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence            999999999999999999999998  999999999999999 5564      789999998  99999999999999999


Q ss_pred             ccC
Q psy17050        171 HSD  173 (295)
Q Consensus       171 h~~  173 (295)
                      |++
T Consensus       153 hhg  155 (155)
T 2gli_A          153 VHG  155 (155)
T ss_dssp             SCC
T ss_pred             hcC
Confidence            875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=2.9e-27  Score=190.14  Aligned_cols=139  Identities=27%  Similarity=0.574  Sum_probs=128.3

Q ss_pred             CCCceec--ccchhhccCHHHHHHHHHhcccccCCCCcccccc--ccccccCChHHHHHHH-HHh-cCCCCccc--ccch
Q psy17050         22 SPASHMC--EDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCH--DCGKTFNSRSSQQIHQ-RIH-TGERPYSC--RYCY   93 (295)
Q Consensus        22 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~   93 (295)
                      ++++|.|  ..|++.|.+...|..|++.|+     ++++|.|.  .|++.|.+...|..|+ +.| .++++|.|  ..|+
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~  113 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-----GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCG  113 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-----TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSC
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHcc-----CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCc
Confidence            4678999  889999999999999999995     67899999  8999999999999999 566 46789999  8899


Q ss_pred             hccCChHhHHHHHHHhCCCCcccCcc--hhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc---CccccCCHHHHHHHH
Q psy17050         94 KAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECKV---CGCMLSSSPELCQHL  168 (295)
Q Consensus        94 ~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~---C~~~f~~~~~L~~H~  168 (295)
                      +.|.+...|..|++.|+++++|.|++  |++.|.+...|..|+++|+      +   |.|..   |++.|.+...|..|+
T Consensus       114 k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~------~---~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          114 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA------G---YPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             EECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC------S---CCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC------C---CcCCCCCcCCCccccHHHHHHHH
Confidence            99999999999999999999999988  9999999999999999986      3   99999   999999999999999


Q ss_pred             hhccCC
Q psy17050        169 VQHSDE  174 (295)
Q Consensus       169 ~~h~~~  174 (295)
                      ++|+++
T Consensus       185 ~~h~~e  190 (190)
T 1tf6_A          185 AECHQD  190 (190)
T ss_dssp             TTCC--
T ss_pred             HhhcCC
Confidence            999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.6e-26  Score=178.35  Aligned_cols=138  Identities=27%  Similarity=0.510  Sum_probs=126.5

Q ss_pred             ccccccccccccCChHHHHHHHH---HhcCCCCcccccc-----hhccCChHhHHHHHHHhCCCCcccCcc--hhhhcCC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQR---IHTGERPYSCRYC-----YKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQ  126 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~  126 (295)
                      .+|.|..|++.|.+...|..|++   +|.++++|.|.+|     ++.|.+...|..|++.|+++++|.|.+  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            57899999999999999999998   6788899998863     499999999999999999999999986  9999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCcceecCc--CccccCCHHHHHHHH-hhccCCCCcCCCCCCC--CccchhhhhccCCCCCC
Q psy17050        127 RVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELCQHL-VQHSDENTAKNRVVPT--APRKYKRRRKLLPHEGD  201 (295)
Q Consensus       127 ~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~  201 (295)
                      ...|..|++.|+      ++++|.|++  |++.|.+...|..|+ +.|.++   +.+.|+.  |++.|.+...|..|++.
T Consensus        82 ~~~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A           82 LENLKTHLRSHT------GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE---KPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             HHHHHHHHHHTT------TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC---CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC------CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC---CCeeCCCCCCccccCCHHHHHHHHHh
Confidence            999999999987      789999998  999999999999999 788776   4577987  99999999999999987


Q ss_pred             CC
Q psy17050        202 GF  203 (295)
Q Consensus       202 ~~  203 (295)
                      ++
T Consensus       153 hh  154 (155)
T 2gli_A          153 VH  154 (155)
T ss_dssp             SC
T ss_pred             hc
Confidence            76

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=6.2e-25  Score=163.99  Aligned_cols=109  Identities=29%  Similarity=0.679  Sum_probs=58.8

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHH---hCCCCcccCcchhhhcCCHHHHHH
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERV---HTGEKPYVCPICSKAFNQRVVLRE  132 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~  132 (295)
                      .++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|+..   +.++++|.|.+|++.|.+...|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence            34455555555555555555555555555555555555555555555555543   234455555555555555555555


Q ss_pred             HHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhh
Q psy17050        133 HIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       133 H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |++.|+      ++++|.|.+|++.|.+...|..|++.
T Consensus        85 H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           85 HMVSHT------GEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHS------SSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHcC------CCCCccCCCccchhCCHHHHHHHHHH
Confidence            555554      45555555555555555555555543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.1e-24  Score=162.59  Aligned_cols=115  Identities=30%  Similarity=0.627  Sum_probs=108.1

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHH---hcCCCCcccccchhccC
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRI---HTGERPYSCRYCYKAFA   97 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~   97 (295)
                      +++++|+|.+|++.|.+...|..|++.|+     +.++|.|.+|++.|.+...|..|+..   +.++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~   77 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-----GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFR   77 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-----SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEES
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-----CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccC
Confidence            56789999999999999999999999995     67899999999999999999999986   57889999999999999


Q ss_pred             ChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCC
Q psy17050         98 DGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG  140 (295)
Q Consensus        98 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  140 (295)
                      +...|..|++.|+++++|.|.+|++.|.+...|..|++..|.+
T Consensus        78 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           78 RRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             SHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             CHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            9999999999999999999999999999999999999987743

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=6.1e-25  Score=170.68  Aligned_cols=132  Identities=28%  Similarity=0.516  Sum_probs=103.0

Q ss_pred             CCCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCC----CCccccccccccccCChHHHHHHHHHhcCCCCcccc
Q psy17050         15 ASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTE----RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR   90 (295)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   90 (295)
                      .-......+..|.|..|++.|.+...|..|++.+|.....    ...+|.|..|++.|.+...|..|+++|+++++|.|.
T Consensus        15 ~c~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   94 (155)
T 2rpc_A           15 SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP   94 (155)
T ss_dssp             CCCBCCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECS
T ss_pred             eEEeechhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCC
Confidence            3334445677899999999999999999999884421110    011278888888888888888888888888888888


Q ss_pred             c--chhccCChHhHHHHHHHhCCCCcccCcc--hhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050         91 Y--CYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus        91 ~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +  |++.|.....|..|++.|+++++|.|.+  |++.|.+...|..|+++|+      ++++|.|.
T Consensus        95 ~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~------~~k~~~c~  154 (155)
T 2rpc_A           95 FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT------SDKSGPSS  154 (155)
T ss_dssp             CTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTT------SCCCSCSC
T ss_pred             cCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhc------CCCCCCCC
Confidence            7  8888888888888888888888888886  8888888888888888876      67778774

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=8.2e-25  Score=162.17  Aligned_cols=111  Identities=38%  Similarity=0.773  Sum_probs=76.7

Q ss_pred             CCccccccc--cccccCChHHHHHHHHHhcCCCCcccc--cchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHH
Q psy17050         55 RGRIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCR--YCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVL  130 (295)
Q Consensus        55 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  130 (295)
                      ++++|.|.+  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|++.|+++++|.|.+|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            455666765  777777666777777666666677776  5777777777777777766666777777777777777777


Q ss_pred             HHHHHHhcCCCCCCCCcceec--CcCccccCCHHHHHHHHhhc
Q psy17050        131 REHIRAHHSGPESKGATTFEC--KVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       131 ~~H~~~~h~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h  171 (295)
                      ..|++.|+      ++++|.|  +.|++.|.+...|..|+++|
T Consensus        83 ~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHT------GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHH------TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhc------CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            77777665      5666777  56777777777777776654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=3.3e-25  Score=167.23  Aligned_cols=108  Identities=30%  Similarity=0.554  Sum_probs=96.9

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHH
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREH  133 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  133 (295)
                      .|+++|.|.+|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.+...|..|
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH   97 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHH
Confidence            57789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCcceecCcCccccCCH
Q psy17050        134 IRAHHSGPESKGATTFECKVCGCMLSSS  161 (295)
Q Consensus       134 ~~~~h~~~~~~~~~~~~C~~C~~~f~~~  161 (295)
                      ++++|+.......++|.|..|++.|...
T Consensus        98 ~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           98 IKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             hHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999876554556789999999988754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=9.3e-25  Score=161.87  Aligned_cols=112  Identities=34%  Similarity=0.784  Sum_probs=106.6

Q ss_pred             CCCCceeccc--chhhccCHHHHHHHHHhcccccCCCCcccccc--ccccccCChHHHHHHHHHhcCCCCcccccchhcc
Q psy17050         21 ASPASHMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAF   96 (295)
Q Consensus        21 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   96 (295)
                      +++++|.|.+  |++.|.+...|..|++.|+     +.++|.|.  .|++.|.+...|..|++.|+++++|.|.+|++.|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   76 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-----GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF   76 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-----TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-----CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh
Confidence            4578999997  9999999999999999995     67899999  7999999999999999999999999999999999


Q ss_pred             CChHhHHHHHHHhCCCCcccC--cchhhhcCCHHHHHHHHHHh
Q psy17050         97 ADGGTLRKHERVHTGEKPYVC--PICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus        97 ~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  137 (295)
                      .+...|..|++.|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        77 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           77 SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999  89999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=2.5e-24  Score=160.84  Aligned_cols=112  Identities=36%  Similarity=0.739  Sum_probs=73.1

Q ss_pred             cccccc--ccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc--hhhhcCCHHHHHH
Q psy17050         57 RIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLRE  132 (295)
Q Consensus        57 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  132 (295)
                      ++|.|+  .|++.|.+...|..|++.| ++++|.|.+|++.|.+...|..|++.|+++++|.|.+  |++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            456666  5666666666666666666 5666666666666666666666666666666677764  7777777777777


Q ss_pred             HHHHhcCCCCCCCCcceecC--cCccccCCHHHHHHHHhhccCCC
Q psy17050        133 HIRAHHSGPESKGATTFECK--VCGCMLSSSPELCQHLVQHSDEN  175 (295)
Q Consensus       133 H~~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  175 (295)
                      |++.|+      ++++|.|+  .|++.|.+...|..|+++|++++
T Consensus        83 H~~~h~------~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           83 HVRIHT------GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHH------CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHhC------CCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            776665      56667774  37777777777777777766553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=2.1e-24  Score=161.18  Aligned_cols=111  Identities=40%  Similarity=0.824  Sum_probs=103.6

Q ss_pred             CCCceecc--cchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCccccc--chhccC
Q psy17050         22 SPASHMCE--DCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFA   97 (295)
Q Consensus        22 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~   97 (295)
                      ++++|.|+  .|++.|.+...|..|++.|      +.++|.|..|++.|.+...|..|++.|+++++|.|.+  |++.|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   75 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH------GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS   75 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG------SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEES
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc------CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccC
Confidence            35789999  8999999999999999988      5678999999999999999999999999999999986  999999


Q ss_pred             ChHhHHHHHHHhCCCCcccCc--chhhhcCCHHHHHHHHHHhc
Q psy17050         98 DGGTLRKHERVHTGEKPYVCP--ICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        98 ~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h  138 (295)
                      ....|..|++.|+++++|.|+  .|++.|.+...|..|+++|+
T Consensus        76 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           76 LDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             CHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHc
Confidence            999999999999999999996  49999999999999999997

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=3e-24  Score=162.01  Aligned_cols=103  Identities=25%  Similarity=0.403  Sum_probs=96.2

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCCh
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADG   99 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   99 (295)
                      ..|+++|+|.+|++.|.....|..|++.|.     ++++|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|...
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~-----~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNIHS-----WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHHHH-----CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHHcC-----CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            367899999999999999999999999995     788999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHhCCCC------cccCcchhhhcCCH
Q psy17050        100 GTLRKHERVHTGEK------PYVCPICSKAFNQR  127 (295)
Q Consensus       100 ~~L~~H~~~h~~~~------~~~C~~C~~~f~~~  127 (295)
                      ..|..|++.|++++      +|+|.+|++.|...
T Consensus        92 ~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999998764      58999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.5e-23  Score=162.84  Aligned_cols=118  Identities=31%  Similarity=0.576  Sum_probs=109.0

Q ss_pred             CCccccccccccccCChHHHHHHHHH-hcCCCC--------cccccchhccCChHhHHHHHHHhCCCCcccCcc--hhhh
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRI-HTGERP--------YSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI--CSKA  123 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~  123 (295)
                      ....|.|..|++.|.+...|..|++. |.+..+        |.|.+|++.|.+...|..|++.|+++++|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            45789999999999999999999998 666554        899999999999999999999999999999998  9999


Q ss_pred             cCCHHHHHHHHHHhcCCCCCCCCcceecCc--CccccCCHHHHHHHHhhccCCCCcC
Q psy17050        124 FNQRVVLREHIRAHHSGPESKGATTFECKV--CGCMLSSSPELCQHLVQHSDENTAK  178 (295)
Q Consensus       124 f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~  178 (295)
                      |.+...|..|++.|+      ++++|.|.+  |++.|.+...|..|+++|++++++.
T Consensus       102 f~~~~~L~~H~~~h~------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          102 FARSENLKIHKRTHT------GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             ESCHHHHHHHHTTTC------SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             cCCHHHHHHHHHhhC------CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            999999999999997      789999997  9999999999999999999986654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=1.1e-20  Score=137.02  Aligned_cols=96  Identities=27%  Similarity=0.603  Sum_probs=80.7

Q ss_pred             CCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhcc
Q psy17050         17 KGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAF   96 (295)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   96 (295)
                      ..+...+++|.|.+|++.|.....|..|++.|+     +.++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|
T Consensus         9 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   83 (106)
T 2ee8_A            9 RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHT-----DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF   83 (106)
T ss_dssp             CCCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHC-----CSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCC
T ss_pred             cCCcCCCcCeECCCCCCccCCHHHHHHHHHHcC-----CCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcc
Confidence            344456778999999999999999999988885     667888888988888888888888888888888888888888


Q ss_pred             CChHhHHHHHHHhCCCCcccC
Q psy17050         97 ADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        97 ~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      .....|..|++.|+++++|.+
T Consensus        84 ~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           84 CQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             SSHHHHHHHHHHTTSCCCCCC
T ss_pred             cCHHHHHHHHHHhCCCCCCcC
Confidence            888888888888888887754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.3e-20  Score=131.27  Aligned_cols=88  Identities=33%  Similarity=0.617  Sum_probs=53.2

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChH
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGG  100 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  100 (295)
                      .++++|+|.+|++.|.+...|..|++.|+     +.++|.|.+|++.|.....|..|++.|+++++|.|.+|++.|....
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   78 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHT-----GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS   78 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCC-----CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcC-----CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHH
Confidence            34556666666666666666666666553     4455666666666666666666666666666666666666666666


Q ss_pred             hHHHHHHHhCCCC
Q psy17050        101 TLRKHERVHTGEK  113 (295)
Q Consensus       101 ~L~~H~~~h~~~~  113 (295)
                      .|..|++.|++++
T Consensus        79 ~l~~H~~~h~~~~   91 (96)
T 2dmd_A           79 QLTVHLRSHTGDS   91 (96)
T ss_dssp             HHHHHHTTCCSCC
T ss_pred             HHHHHHHHhcCCC
Confidence            6666666655544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=7e-20  Score=132.65  Aligned_cols=91  Identities=37%  Similarity=0.708  Sum_probs=74.1

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHI  134 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  134 (295)
                      ..++|.|.+|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|++.|+++++|.|.+|++.|.+...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            45678888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhcCCCCCCCCcceec
Q psy17050        135 RAHHSGPESKGATTFEC  151 (295)
Q Consensus       135 ~~~h~~~~~~~~~~~~C  151 (295)
                      +.|+      ++++|.+
T Consensus        94 ~~H~------~~~~~~~  104 (106)
T 2ee8_A           94 TLHM------QTSSPTA  104 (106)
T ss_dssp             HHTT------SCCCCCC
T ss_pred             HHhC------CCCCCcC
Confidence            8876      5555543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.1e-19  Score=129.08  Aligned_cols=85  Identities=34%  Similarity=0.699  Sum_probs=44.0

Q ss_pred             CCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHH
Q psy17050         84 ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPE  163 (295)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~  163 (295)
                      +++|.|.+|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|++.|.+...
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS------DERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC------CCCCEECSSSSCEESSHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC------CCCCccCCCCCCccCCHHH
Confidence            4445555555555555555555555555555555555555555555555555543      4445555555555555555


Q ss_pred             HHHHHhhccCC
Q psy17050        164 LCQHLVQHSDE  174 (295)
Q Consensus       164 L~~H~~~h~~~  174 (295)
                      |..|+++|+++
T Consensus        80 l~~H~~~h~~~   90 (96)
T 2dmd_A           80 LTVHLRSHTGD   90 (96)
T ss_dssp             HHHHHTTCCSC
T ss_pred             HHHHHHHhcCC
Confidence            55555555443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.9e-19  Score=130.66  Aligned_cols=95  Identities=17%  Similarity=0.270  Sum_probs=74.4

Q ss_pred             CCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhc
Q psy17050         16 SKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKA   95 (295)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   95 (295)
                      ......++++|+|.+|++.|.....|..|++.|.       ++|.|.+|++.|.....|..|++ |+++++|.|.+|++.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~   78 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEE
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccch
Confidence            3344566778888888888888888888888773       57888888888888888888885 888888888888888


Q ss_pred             cCChHhHHHHHH-HhCCCCcccCc
Q psy17050         96 FADGGTLRKHER-VHTGEKPYVCP  118 (295)
Q Consensus        96 f~~~~~L~~H~~-~h~~~~~~~C~  118 (295)
                      |.....|..|++ .|.++++|.|.
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCCC
Confidence            888888888876 77777777664

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=1.2e-19  Score=124.97  Aligned_cols=79  Identities=46%  Similarity=0.899  Sum_probs=34.1

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHh
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      |.|.+|++.|.+...|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.+...|..|+++|
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            3344444444444444444444444444444444444444444444444444444444444444444444444444443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=1.5e-19  Score=126.76  Aligned_cols=84  Identities=27%  Similarity=0.618  Sum_probs=44.2

Q ss_pred             Cceecc--cchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHh
Q psy17050         24 ASHMCE--DCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGT  101 (295)
Q Consensus        24 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  101 (295)
                      ++|.|.  .|++.|.....|..|++.|+     +.++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.....
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHT-----GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHH-----CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhC-----CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHH
Confidence            455554  35555555555555555553     34455555555555555555555555555555555555555555555


Q ss_pred             HHHHHHHhCCC
Q psy17050        102 LRKHERVHTGE  112 (295)
Q Consensus       102 L~~H~~~h~~~  112 (295)
                      |..|+++|+++
T Consensus        78 l~~H~~~H~~~   88 (90)
T 1a1h_A           78 RKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHGGGGC-
T ss_pred             HHHHHHHhccc
Confidence            55555555443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=1.8e-19  Score=126.35  Aligned_cols=83  Identities=40%  Similarity=0.866  Sum_probs=41.5

Q ss_pred             CCcccc--cchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHH
Q psy17050         85 RPYSCR--YCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSP  162 (295)
Q Consensus        85 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~  162 (295)
                      ++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.+...|..|++.|+      ++++|.|..|++.|.+..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~   76 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT------GEKPFACDICGRKFARSD   76 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH------CCCCEECTTTCCEESSHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC------CCCCccCCCCCchhCCHH
Confidence            344444  244444444444444444444445555555555555555555555444      444555555555555555


Q ss_pred             HHHHHHhhccC
Q psy17050        163 ELCQHLVQHSD  173 (295)
Q Consensus       163 ~L~~H~~~h~~  173 (295)
                      .|..|+++|++
T Consensus        77 ~l~~H~~~H~~   87 (90)
T 1a1h_A           77 ERKRHTKIHLR   87 (90)
T ss_dssp             HHHHHHGGGGC
T ss_pred             HHHHHHHHhcc
Confidence            55555555544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.2e-19  Score=123.56  Aligned_cols=82  Identities=40%  Similarity=0.775  Sum_probs=78.1

Q ss_pred             ceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRK  104 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  104 (295)
                      +|.|.+|++.|.+...|..|++.|+     +.++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   75 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-----DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLIT   75 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-----TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-----CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHH
Confidence            5899999999999999999999985     67899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCC
Q psy17050        105 HERVHTG  111 (295)
Q Consensus       105 H~~~h~~  111 (295)
                      |++.|+|
T Consensus        76 H~~~H~g   82 (82)
T 2kmk_A           76 HSRKHTG   82 (82)
T ss_dssp             HHHHHC-
T ss_pred             HHHhhCC
Confidence            9999974

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=4.7e-19  Score=125.57  Aligned_cols=80  Identities=36%  Similarity=0.725  Sum_probs=38.9

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCC--CcccCcchhhhcCCHHHHHHH
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE--KPYVCPICSKAFNQRVVLREH  133 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H  133 (295)
                      +++|.|.+|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|++.|+++  ++|.|.+|++.|.+...|..|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            344444444444444444444444444444444444444444444444444444443  444454455445444444444


Q ss_pred             HH
Q psy17050        134 IR  135 (295)
Q Consensus       134 ~~  135 (295)
                      ++
T Consensus        85 ~~   86 (95)
T 2yt9_A           85 IK   86 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=9.7e-19  Score=123.92  Aligned_cols=88  Identities=32%  Similarity=0.659  Sum_probs=81.1

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCC--CCcccccchhccC
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE--RPYSCRYCYKAFA   97 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~   97 (295)
                      .+++++|.|.+|++.|.+...|..|++.|+     +.++|.|..|++.|.+...|..|++.|+++  ++|.|.+|++.|.
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHS-----GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSC-----SSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcC-----CCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            356789999999999999999999999985     678999999999999999999999999987  8999999999999


Q ss_pred             ChHhHHHHHH-HhCCC
Q psy17050         98 DGGTLRKHER-VHTGE  112 (295)
Q Consensus        98 ~~~~L~~H~~-~h~~~  112 (295)
                      ....|..|++ .|.++
T Consensus        77 ~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           77 RPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SHHHHHHHHHHTSCCC
T ss_pred             CHHHHHHHHHHhcCCC
Confidence            9999999986 56653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=7.1e-19  Score=128.21  Aligned_cols=84  Identities=27%  Similarity=0.684  Sum_probs=39.1

Q ss_pred             cCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCH
Q psy17050         82 TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS  161 (295)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~  161 (295)
                      .++++|.| .|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|++.|...
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT------GIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC------CCCCEECSSSCCEESCH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC------CCCCeeCCCCcchhcCH
Confidence            34444444 444444444444444444444444444444444444444444444443      34444444444444444


Q ss_pred             HHHHHHHhhcc
Q psy17050        162 PELCQHLVQHS  172 (295)
Q Consensus       162 ~~L~~H~~~h~  172 (295)
                      ..|..|++.|+
T Consensus        79 ~~l~~H~~~~~   89 (110)
T 2csh_A           79 DSFHRHVTSCT   89 (110)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHcc
Confidence            44444444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.9e-19  Score=129.08  Aligned_cols=84  Identities=38%  Similarity=0.816  Sum_probs=81.3

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHH
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREH  133 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  133 (295)
                      .++++|.| .|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|++.|+++++|.|.+|++.|.+...|..|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            47789999 99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhc
Q psy17050        134 IRAHH  138 (295)
Q Consensus       134 ~~~~h  138 (295)
                      ++.|+
T Consensus        85 ~~~~~   89 (110)
T 2csh_A           85 VTSCT   89 (110)
T ss_dssp             HHHHH
T ss_pred             HHHcc
Confidence            99987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=2.7e-20  Score=136.91  Aligned_cols=84  Identities=18%  Similarity=0.309  Sum_probs=44.6

Q ss_pred             CCccccccccccccCChHHHHHHHHH--hcCCCCcc-cccchhcc--CChHhHHHHHHHhCCCCcccCcchhhhcCCHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRI--HTGERPYS-CRYCYKAF--ADGGTLRKHERVHTGEKPYVCPICSKAFNQRVV  129 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  129 (295)
                      ++++|.|..|++.|.+...|..|++.  |.+.+++. |.+|++.|  .....|..|++.|+++++|.|.+|++.|.+...
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~   95 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQD   95 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHH
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHH
Confidence            44555555555555555555555555  44343332 55555555  555555555555555555555555555555555


Q ss_pred             HHHHHHHhc
Q psy17050        130 LREHIRAHH  138 (295)
Q Consensus       130 l~~H~~~~h  138 (295)
                      |..|++.+|
T Consensus        96 L~~H~~~hh  104 (115)
T 2dmi_A           96 LSVHMIKTK  104 (115)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhC
Confidence            555555554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=1.4e-20  Score=138.47  Aligned_cols=99  Identities=20%  Similarity=0.318  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHH--hCCCCcc-cCcchhhhc--CCHHHHHHHHHHhcCCCCCCC
Q psy17050         71 RSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERV--HTGEKPY-VCPICSKAF--NQRVVLREHIRAHHSGPESKG  145 (295)
Q Consensus        71 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~  145 (295)
                      ...|..|+++|+++++|.|.+|++.|.....|..|++.  |.+.+++ .|.+|++.|  .+...|..|++.|+      +
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~------~   77 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED------A   77 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC------C
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC------C
Confidence            45678899999999999999999999999999999998  7777765 499999999  88999999999986      7


Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccCCC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSDEN  175 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  175 (295)
                      +++|.|.+|++.|.....|..|+++|+...
T Consensus        78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            899999999999999999999999987653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.76  E-value=4.2e-18  Score=121.74  Aligned_cols=90  Identities=24%  Similarity=0.519  Sum_probs=70.4

Q ss_pred             CCCCCCCCceeccc--chhhccCHHHHHHHHHhcccccCCCCcccccc--ccccccCChHHHHHHHHHhcCCCCcccccc
Q psy17050         17 KGPPASPASHMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYC   92 (295)
Q Consensus        17 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   92 (295)
                      .......+.|.|.+  |++.|.....|..|++.|+     +.++|.|.  .|++.|.....|..|++.|+++++|.|.+|
T Consensus         7 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   81 (100)
T 2ebt_A            7 GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT-----GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC   81 (100)
T ss_dssp             CCCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHS-----CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred             CcccccCcceEcCCCCCCCcccCHHHHHHHHHHhC-----CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence            33445567888886  8888888888888888874     66778885  588888888888888888888888888888


Q ss_pred             hhccCChHhHHHHHHHhCC
Q psy17050         93 YKAFADGGTLRKHERVHTG  111 (295)
Q Consensus        93 ~~~f~~~~~L~~H~~~h~~  111 (295)
                      ++.|.....|..|++.|++
T Consensus        82 ~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           82 NRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCBCSSHHHHHHHHHHHCC
T ss_pred             cCccCCHHHHHHHHHHhCC
Confidence            8888888888888887753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.4e-19  Score=128.69  Aligned_cols=78  Identities=22%  Similarity=0.453  Sum_probs=38.4

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHI  134 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  134 (295)
                      ++++|.|.+|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+. |+++++|.|.+|++.|.+...|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHH
Confidence            3444555555555555555555555542  34455555555554444555543 44444444444444444444444444


Q ss_pred             H
Q psy17050        135 R  135 (295)
Q Consensus       135 ~  135 (295)
                      +
T Consensus        90 ~   90 (107)
T 1wjp_A           90 V   90 (107)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=1.2e-17  Score=119.31  Aligned_cols=84  Identities=38%  Similarity=0.784  Sum_probs=65.9

Q ss_pred             CCccccccc--cccccCChHHHHHHHHHhcCCCCcccc--cchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHH
Q psy17050         55 RGRIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCR--YCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVL  130 (295)
Q Consensus        55 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  130 (295)
                      ..++|.|.+  |++.|.....|..|++.|+++++|.|.  .|++.|.....|..|++.|+++++|.|.+|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            456778876  888888888888888888888888885  4888888888888888778777778888888888888888


Q ss_pred             HHHHHHhc
Q psy17050        131 REHIRAHH  138 (295)
Q Consensus       131 ~~H~~~~h  138 (295)
                      ..|+++|+
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            88877764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=1.7e-18  Score=120.93  Aligned_cols=81  Identities=22%  Similarity=0.507  Sum_probs=61.4

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHH
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRA  136 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  136 (295)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|++ .+|.|..|++.|.+...|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            5677777777777777777777777777777777777777777777777777764 667777777777777777777777


Q ss_pred             hc
Q psy17050        137 HH  138 (295)
Q Consensus       137 ~h  138 (295)
                      +|
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            66

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.2e-17  Score=115.30  Aligned_cols=82  Identities=33%  Similarity=0.701  Sum_probs=51.6

Q ss_pred             CCceeccc--chhhccCHHHHHHHHHhcccccCCCCcccccc--ccccccCChHHHHHHHHHhcCCCCcccccchhccCC
Q psy17050         23 PASHMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFAD   98 (295)
Q Consensus        23 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   98 (295)
                      +++|.|..  |++.|.+...|..|++.|+     +.++|.|+  .|++.|.+...|..|++.|+++++|.|.+|++.|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-----GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSR   77 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-----SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-----CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCC
Confidence            34566666  6666666666666666653     44566665  366666666666666666666666666666666666


Q ss_pred             hHhHHHHHHHh
Q psy17050         99 GGTLRKHERVH  109 (295)
Q Consensus        99 ~~~L~~H~~~h  109 (295)
                      ...|..|++.|
T Consensus        78 ~~~l~~H~~~H   88 (89)
T 2wbs_A           78 SDHLALHMKRH   88 (89)
T ss_dssp             HHHHHHHGGGG
T ss_pred             HHHHHHHHHhh
Confidence            66666666555

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.1e-17  Score=115.48  Aligned_cols=80  Identities=38%  Similarity=0.753  Sum_probs=41.0

Q ss_pred             Cccccc--chhccCChHhHHHHHHHhCCCCcccCc--chhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCH
Q psy17050         86 PYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCP--ICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSS  161 (295)
Q Consensus        86 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~  161 (295)
                      .|.|.+  |++.|.+...|..|++.|+++++|.|+  .|++.|.+...|..|++.|+      ++++|.|..|++.|...
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT------GHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH------CCCCEECSSSSCEESSH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC------CCCCccCCCCCcccCCH
Confidence            344544  555555555555555555545555554  25555555555555555554      44455555555555555


Q ss_pred             HHHHHHHhhc
Q psy17050        162 PELCQHLVQH  171 (295)
Q Consensus       162 ~~L~~H~~~h  171 (295)
                      ..|..|+++|
T Consensus        79 ~~l~~H~~~H   88 (89)
T 2wbs_A           79 DHLALHMKRH   88 (89)
T ss_dssp             HHHHHHGGGG
T ss_pred             HHHHHHHHhh
Confidence            5555555544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=2.2e-18  Score=120.42  Aligned_cols=83  Identities=28%  Similarity=0.562  Sum_probs=78.5

Q ss_pred             CCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHH
Q psy17050         84 ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPE  163 (295)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~  163 (295)
                      +++|.|.+|++.|.....|..|++.|+++++|.|..|++.|.+...|..|++.+|       ..+|.|..|++.|.....
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-------~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-------ILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-------CCcchHHHHHHHHHHHhh
Confidence            4789999999999999999999999999999999999999999999999999997       488999999999999999


Q ss_pred             HHHHHhhccC
Q psy17050        164 LCQHLVQHSD  173 (295)
Q Consensus       164 L~~H~~~h~~  173 (295)
                      |..|++.+++
T Consensus        74 L~~H~~~~h~   83 (88)
T 1llm_C           74 LENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHH
T ss_pred             hHHHHHHHHH
Confidence            9999988764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=2.5e-17  Score=105.66  Aligned_cols=56  Identities=41%  Similarity=0.746  Sum_probs=30.3

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE  112 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  112 (295)
                      +||.|.+||+.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+|+
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            45555555555555555555555555555555555555555555555555555543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=5e-17  Score=104.23  Aligned_cols=59  Identities=31%  Similarity=0.588  Sum_probs=55.5

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCC
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER   85 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   85 (295)
                      ++|||+|.+||+.|.....|..|++.|.     ++++|.|.+||+.|.....|..|+++|+++.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht-----~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHL-----GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHH-----TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhC-----CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4799999999999999999999999994     8899999999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.67  E-value=6.4e-17  Score=111.84  Aligned_cols=48  Identities=38%  Similarity=0.697  Sum_probs=19.2

Q ss_pred             ccchhccCChHhHHHHHHHhCCCCcccCcc--hhhhcCCHHHHHHHHHHh
Q psy17050         90 RYCYKAFADGGTLRKHERVHTGEKPYVCPI--CSKAFNQRVVLREHIRAH  137 (295)
Q Consensus        90 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  137 (295)
                      ..|++.|.....|..|++.|+++++|.|++  |++.|.+...|..|++.|
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   56 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH   56 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence            333333333333334433333333444433  444444444444444443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=1.4e-16  Score=110.06  Aligned_cols=78  Identities=35%  Similarity=0.747  Sum_probs=74.6

Q ss_pred             cccc--cccccccCChHHHHHHHHHhcCCCCccccc--chhccCChHhHHHHHHHhCCCCcccCcc---hhhhcCCHHHH
Q psy17050         58 IFPC--HDCGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPI---CSKAFNQRVVL  130 (295)
Q Consensus        58 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  130 (295)
                      +|.|  ..|++.|.+...|..|+++|.++++|.|.+  |++.|.....|..|++.|++   |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5889  899999999999999999999999999998  99999999999999999987   99999   99999999999


Q ss_pred             HHHHHHhc
Q psy17050        131 REHIRAHH  138 (295)
Q Consensus       131 ~~H~~~~h  138 (295)
                      ..|++.||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=5.7e-17  Score=112.43  Aligned_cols=62  Identities=32%  Similarity=0.640  Sum_probs=25.7

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCC----CcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE----KPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+..    ++|.|.+|++.|.+...|..|++.|+
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc
Confidence            344444444444444444444444444444333322    33444444444444444444444443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.2e-16  Score=107.66  Aligned_cols=69  Identities=30%  Similarity=0.653  Sum_probs=35.2

Q ss_pred             CCceeccc--chhhccCHHHHHHHHH-hcccccCCCCccccccc--cccccCChHHHHHHHHHhcCCCCcccccchhcc
Q psy17050         23 PASHMCED--CGEEYWDRQSLLVHKA-RHDVIRTERGRIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAF   96 (295)
Q Consensus        23 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   96 (295)
                      +++|.|..  |++.|.+...|..|++ .|.     +.++|.|.+  |++.|.+...|..|+++|+++++|.|.+|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-----~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-----HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGG-----SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhC-----CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            44555544  5555555555555555 332     344555554  555555555555555555555555555555544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.9e-16  Score=105.50  Aligned_cols=72  Identities=25%  Similarity=0.610  Sum_probs=68.0

Q ss_pred             CCCccccccc--cccccCChHHHHHHHH-HhcCCCCccccc--chhccCChHhHHHHHHHhCCCCcccCcchhhhcC
Q psy17050         54 ERGRIFPCHD--CGKTFNSRSSQQIHQR-IHTGERPYSCRY--CYKAFADGGTLRKHERVHTGEKPYVCPICSKAFN  125 (295)
Q Consensus        54 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~  125 (295)
                      .+.++|.|..  |++.|.+...|..|++ .|.++++|.|.+  |++.|.....|..|+++|+++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3668899987  9999999999999999 799999999999  9999999999999999999999999999999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.1e-15  Score=103.76  Aligned_cols=69  Identities=30%  Similarity=0.600  Sum_probs=47.4

Q ss_pred             CCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         16 SKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      ......++++|+|.+|++.|.....|..|++.|+     +.++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT-----GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-----CSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcC-----CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344455667777777777777777777777664     55667777777777777777777777777777665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.61  E-value=1.2e-16  Score=119.72  Aligned_cols=114  Identities=18%  Similarity=0.269  Sum_probs=61.0

Q ss_pred             CCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccC------ChHHHHHHHHHhcCCCCccccc
Q psy17050         18 GPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFN------SRSSQQIHQRIHTGERPYSCRY   91 (295)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~   91 (295)
                      ...++.++|.|..++....  ..+..|.+.+..  ....+.+.|.+|++.|.      ....|..|+ .|+++++|.|.+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l--~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~   79 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIH--VTLEELKRYHQL--TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL   79 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEE--CCHHHHHHHTTS--CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT
T ss_pred             hhcccccccccccCCeeee--ecHHhhhccccC--ChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC
Confidence            3445667776665543321  122223222210  01234566666665554      334444444 455566666666


Q ss_pred             chhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050         92 CYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        92 C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |++.|.....|..|++.|  +++|.|.+|++.|.+...|..|++.||
T Consensus        80 C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           80 CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            666666666666666665  556666666666666666666666665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.2e-16  Score=108.59  Aligned_cols=78  Identities=18%  Similarity=0.336  Sum_probs=47.9

Q ss_pred             HHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCC----CCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         42 LVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE----RPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        42 ~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ..|++.|.     ++++|.|.+|++.|.....|..|++.|+..    ++|.|.+|++.|.....|..|++.|++++++.|
T Consensus         4 ~~H~~~H~-----~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            4 GSSGRTHT-----GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TCCSTTCC-----CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             ccccceec-----CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCccc
Confidence            34555552     455666666666666666666666655544    556666666666666666666666666666666


Q ss_pred             cchhhhc
Q psy17050        118 PICSKAF  124 (295)
Q Consensus       118 ~~C~~~f  124 (295)
                      ..|+..|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            6666543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.8e-15  Score=102.64  Aligned_cols=64  Identities=44%  Similarity=0.827  Sum_probs=55.4

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3567888888888888888888888888888888888888888888888888888888888887

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=6.8e-16  Score=115.61  Aligned_cols=110  Identities=17%  Similarity=0.311  Sum_probs=86.5

Q ss_pred             CCCccccccccccccCChHHHHHHHHH---hcCCCCcccccchhccC------ChHhHHHHHHHhCCCCcccCcchhhhc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRI---HTGERPYSCRYCYKAFA------DGGTLRKHERVHTGEKPYVCPICSKAF  124 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~~C~~C~~~f  124 (295)
                      .+.++|.|..++....  ..+..|.+.   ...++.+.|.+|.+.|.      ....|..|+ .|+++++|.|.+|++.|
T Consensus         8 ~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f   84 (129)
T 2wbt_A            8 SGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPF   84 (129)
T ss_dssp             TTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEE
T ss_pred             ccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCccc
Confidence            4778998887664432  123334322   23346688999888776      556666666 68889999999999999


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        125 NQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       125 ~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      .....|..|+++|        +++|.|..|++.|.....|..|+++|++.
T Consensus        85 ~~~~~l~~H~~~H--------~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           85 SSSVSLKQHIRYT--------EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SSHHHHHHHHHHT--------CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHhHHHHHHHHC--------CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999987        36799999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.2e-15  Score=108.67  Aligned_cols=77  Identities=19%  Similarity=0.384  Sum_probs=62.8

Q ss_pred             ccCChHhHHHHHHHhCCCCcccCcchhhhcC-CHHHHHHHHHHhcCCCCCCC-CcceecCcCccccCCHHHHHHHHhhcc
Q psy17050         95 AFADGGTLRKHERVHTGEKPYVCPICSKAFN-QRVVLREHIRAHHSGPESKG-ATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus        95 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      .+.....+..|++.|.++++|.|.+|++.|. +...|..|++.|+      + +++|.|.+|++.|.....|..|+++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~------~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ------KLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH------HHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc------CCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            3445556778888888888888888888888 8888888888887      5 788889889999998888999988888


Q ss_pred             CCCCc
Q psy17050        173 DENTA  177 (295)
Q Consensus       173 ~~~~~  177 (295)
                      ++++.
T Consensus        79 ~~kp~   83 (98)
T 2gqj_A           79 SAKPS   83 (98)
T ss_dssp             CSCSS
T ss_pred             CCCCC
Confidence            77653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=6.9e-15  Score=98.90  Aligned_cols=63  Identities=32%  Similarity=0.695  Sum_probs=38.4

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCc
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPY   87 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   87 (295)
                      ..++++|+|..|++.|.....|..|++.|.     ++++|.|.+|++.|.....|..|+++|+++++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-----~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHT-----GEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-----CCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcC-----CCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344556666666666666666666666663     445666666666666666666666666665553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=8.1e-15  Score=98.56  Aligned_cols=62  Identities=35%  Similarity=0.868  Sum_probs=49.6

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY  115 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  115 (295)
                      .++++|.|..|++.|.....|..|++.|+++++|.|.+|++.|.....|..|++.|+++++|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            45677888888888888888888888888888888888888888888888888888877765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=3.7e-15  Score=106.23  Aligned_cols=67  Identities=18%  Similarity=0.276  Sum_probs=42.1

Q ss_pred             CCCccccccccccccCChHHHHHHHH-Hh---cCCCCcccccchhccCChHhHHHH-HHHhCCCCcccCcch
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQR-IH---TGERPYSCRYCYKAFADGGTLRKH-ERVHTGEKPYVCPIC  120 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~C  120 (295)
                      .++++|.|..|++.|.....|..|++ .|   .++++|.|.+|++.|.....|..| ++.|.++++|.|.++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            45566666666666666666666665 35   345666666666666666666666 566666666666653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=9.3e-16  Score=109.19  Aligned_cols=71  Identities=23%  Similarity=0.303  Sum_probs=51.1

Q ss_pred             cCChHHHHHHHHHhcCCCCcccccchhccC-ChHhHHHHHHHhCC-CCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050         68 FNSRSSQQIHQRIHTGERPYSCRYCYKAFA-DGGTLRKHERVHTG-EKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        68 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      +.....+..|+++|.++++|.|.+|++.|. ....|..|++.|++ +++|.|.+|++.|.+...|..|++.||
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            334445566777777777777777777777 77777777777776 677777777777777777777777776

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.6e-14  Score=102.16  Aligned_cols=70  Identities=17%  Similarity=0.272  Sum_probs=37.4

Q ss_pred             ccCChHHHHHHHHHhcCCCCcccccchhcc-CChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHH-HHHh
Q psy17050         67 TFNSRSSQQIHQRIHTGERPYSCRYCYKAF-ADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREH-IRAH  137 (295)
Q Consensus        67 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~  137 (295)
                      .|.....|..|++.|.++++|.|..|++.| .....|..|++.| ++++|.|.+|++.|.....|..| +++|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            334444455555555555555555555555 5555555555555 55555555555555555555555 4433

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.1e-14  Score=103.76  Aligned_cols=74  Identities=15%  Similarity=0.247  Sum_probs=64.2

Q ss_pred             CCCCCCceecccchhhccCHHHHHHHHHh-cccccCCCCccccccccccccCChHHHHHH-HHHhcCCCCcccccchh
Q psy17050         19 PPASPASHMCEDCGEEYWDRQSLLVHKAR-HDVIRTERGRIFPCHDCGKTFNSRSSQQIH-QRIHTGERPYSCRYCYK   94 (295)
Q Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~   94 (295)
                      ...++++|.|..|++.|.....|..|++. |.+.  .++++|.|..|++.|.....|..| +++|+++++|.|.++..
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~--~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV--VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC--CCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC--CCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            34678999999999999999999999985 6321  146899999999999999999999 89999999999998543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=6.3e-15  Score=99.91  Aligned_cols=69  Identities=30%  Similarity=0.623  Sum_probs=46.8

Q ss_pred             HHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        102 LRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       102 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      |.+|+++|.++++|.|.+|++.|.+...|..|++.+|..    ..++|.|.+|++.|.....|..|++++|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~----~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE----NVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS----SCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC----CCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            345667777777777777777777777777777654421    136777777777777777777777776553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2e-14  Score=101.68  Aligned_cols=77  Identities=12%  Similarity=0.087  Sum_probs=67.3

Q ss_pred             hccCHHHHHHHHHhcccccCCCCcccccccccccc-CChHHHHHHHHHhcCCCCcccccchhccCChHhHHHH-HHHhCC
Q psy17050         34 EYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTF-NSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKH-ERVHTG  111 (295)
Q Consensus        34 ~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  111 (295)
                      .|.....|..|++.|.     +.++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| ++.|.+
T Consensus        15 ~~~~~~~~~~~~~~~~-----~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIV-----DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHH-----HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhc-----CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            3456677888988885     67899999999999 9999999999999 99999999999999999999999 888876


Q ss_pred             CCccc
Q psy17050        112 EKPYV  116 (295)
Q Consensus       112 ~~~~~  116 (295)
                      +..|.
T Consensus        89 ~p~~~   93 (96)
T 2ctd_A           89 LPSGP   93 (96)
T ss_dssp             CSSCS
T ss_pred             CCCCC
Confidence            54443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.8e-15  Score=97.61  Aligned_cols=58  Identities=40%  Similarity=0.798  Sum_probs=24.9

Q ss_pred             hCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhcc
Q psy17050        109 HTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      |.++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|++.|.....|..|+++|+
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~------~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHT------GEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGG------CSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcC------CCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            334444444444444444444444444433      3344444444444444444444444443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.6e-14  Score=94.90  Aligned_cols=57  Identities=21%  Similarity=0.421  Sum_probs=24.2

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCC
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      +++|+|.+|++.|.....|..|++.|.     ++++|.|.+|++.|.....|..|++.|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~-----~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHC-----TDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGC-----CSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcC-----CCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            344444444444444444444444432     333444444444444444444444444443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.3e-14  Score=95.81  Aligned_cols=63  Identities=54%  Similarity=0.940  Sum_probs=59.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG  140 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  140 (295)
                      .++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|++.|.+...|..|+++|++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999999999999854

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=3.7e-14  Score=90.09  Aligned_cols=54  Identities=43%  Similarity=0.720  Sum_probs=28.1

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      ++|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|.....|..|++.|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            445555555555555555555555555555555555555555555555555444

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=6e-14  Score=93.13  Aligned_cols=62  Identities=29%  Similarity=0.627  Sum_probs=59.0

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY  115 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  115 (295)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|+++++.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            47789999999999999999999999999999999999999999999999999999988764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=5.4e-15  Score=100.22  Aligned_cols=66  Identities=33%  Similarity=0.705  Sum_probs=51.9

Q ss_pred             HHHHHHHhcCCCCcccccchhccCChHhHHHHHH-HhCCC-CcccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050         74 QQIHQRIHTGERPYSCRYCYKAFADGGTLRKHER-VHTGE-KPYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus        74 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      |..|+++|.++++|.|.+|++.|.....|..|++ .|.++ ++|.|.+|++.|.+...|..|++.+|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4457778888888888888888888888888876 45553 688888888888888888888888774

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=8.3e-14  Score=95.76  Aligned_cols=64  Identities=30%  Similarity=0.542  Sum_probs=49.7

Q ss_pred             CCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHHH-HHhcCC
Q psy17050         16 SKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQ-RIHTGE   84 (295)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~   84 (295)
                      +....++.+.|.|++|++.|.....|..|++.|+     ++++|.|.+|++.|.....|..|+ +.|.++
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-----~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLH-----AAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTS-----CSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-----CCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3344556678888888888888888888888885     677888888888888888888886 456655

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.45  E-value=7.3e-14  Score=88.66  Aligned_cols=54  Identities=28%  Similarity=0.613  Sum_probs=27.8

Q ss_pred             CcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhcc
Q psy17050        113 KPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      ++|.|.+|++.|.+...|..|+++|+      ++++|.|.+|++.|.....|..|+++|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHT------GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHH------CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcC------CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            44555555555555555555555554      4455555555555555555555555544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.44  E-value=1.2e-13  Score=87.69  Aligned_cols=54  Identities=35%  Similarity=0.734  Sum_probs=27.1

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCC
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE  112 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  112 (295)
                      |.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            445555555555555555555555555555555555555555555555444443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=5e-14  Score=92.33  Aligned_cols=55  Identities=27%  Similarity=0.679  Sum_probs=20.7

Q ss_pred             CCCCcccccchhccCChHhHHHHHHH-h-CCCCcccCcchhhhcCCHHHHHHHHHHh
Q psy17050         83 GERPYSCRYCYKAFADGGTLRKHERV-H-TGEKPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      ++++|.|..|++.|.....|..|++. | .++++|.|+.|++.|.+...|..|++.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            33333333333333333333333333 2 1333333333333333333333333333

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1e-13  Score=95.27  Aligned_cols=47  Identities=30%  Similarity=0.727  Sum_probs=17.4

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHH
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKH  105 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  105 (295)
                      |.|++|++.|.+...|..|+++|+++++|.|.+|++.|.....|.+|
T Consensus        29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   75 (85)
T 2lv2_A           29 HLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH   75 (85)
T ss_dssp             EECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred             EECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence            33333333333333333333333333333333333333333333333

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=9.4e-14  Score=91.01  Aligned_cols=63  Identities=17%  Similarity=0.446  Sum_probs=56.9

Q ss_pred             HHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++|.++++|.|..|++.|.+...|..|++.+|.    .++++|.|+.|++.|.+...|..|++.||+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~----~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK----RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS----SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC----CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            467889999999999999999999999999552    167899999999999999999999999876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.39  E-value=4.5e-13  Score=84.95  Aligned_cols=53  Identities=23%  Similarity=0.647  Sum_probs=30.0

Q ss_pred             ccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        115 YVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      |.|.+|++.|.+...|..|++.|+      ++++|.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHT------DVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS------SCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcC------CCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            555555555555555555555554      44555555555555555555555555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.7e-13  Score=91.26  Aligned_cols=57  Identities=26%  Similarity=0.508  Sum_probs=26.4

Q ss_pred             hCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHH
Q psy17050        109 HTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHL  168 (295)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  168 (295)
                      |.++++|.|.+|++.|.+...|..|++.|++.   .++++|.|.+|++.|.....|..|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET---VAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH---TTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc---CCCcccCCCCCCchhCCHHHHHHHH
Confidence            33444445555555555555555554444310   0134455555555555555555554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.7e-13  Score=90.72  Aligned_cols=59  Identities=22%  Similarity=0.464  Sum_probs=55.0

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCC---CCcccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTG---EKPYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      |+++++|.|.+|++.|.....|..|++.|++   +++|.|.+|++.|.+...|..|++.+|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            7889999999999999999999999999985   8899999999999999999999988774

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=7.1e-13  Score=84.99  Aligned_cols=47  Identities=36%  Similarity=0.799  Sum_probs=21.1

Q ss_pred             ccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHH
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKH  105 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  105 (295)
                      |.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   49 (60)
T 2adr_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH   49 (60)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            44444444444444444444444444444444444444444444444

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1.3e-12  Score=92.00  Aligned_cols=22  Identities=14%  Similarity=0.297  Sum_probs=11.1

Q ss_pred             eecccchhhccCHHHHHHHHHh
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      |.|..|++.|.....|..|++.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~   47 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTM   47 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHH
Confidence            4455555555555555555544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=8.5e-16  Score=102.93  Aligned_cols=68  Identities=24%  Similarity=0.282  Sum_probs=41.7

Q ss_pred             HHHHHHhcccccCCCCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         41 LLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        41 l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |..|++.|.     ++++|.|.+|++.|.....|..       +++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 l~~H~~~h~-----~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHL-----GDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCC-----CCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhC-----CCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            445555553     5566666666666666555544       5566666666666666666666666666666666655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=5.2e-12  Score=88.87  Aligned_cols=62  Identities=31%  Similarity=0.393  Sum_probs=58.5

Q ss_pred             ccccccccccccCChHHHHHHHHH-hcCCCC--------cccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRI-HTGERP--------YSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      ..|.|..|++.|.....|..|++. |.++++        |.|.+|++.|.....|..|+++|+++++|.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457899999999999999999998 888877        99999999999999999999999999999996

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.6e-15  Score=100.53  Aligned_cols=71  Identities=27%  Similarity=0.379  Sum_probs=59.0

Q ss_pred             hHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCccee
Q psy17050         71 RSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFE  150 (295)
Q Consensus        71 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~  150 (295)
                      ...|..|+++|.++++|.|.+|++.|.....|..       +++|.|.+|++.|.+...|..|+++|+      ++++|.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~------~~~~~~   69 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES------GKKTSG   69 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC------CCCCSS
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc------CCCCCC
Confidence            3456778888888888999999988888887766       678889999999988888888888876      778888


Q ss_pred             cCcC
Q psy17050        151 CKVC  154 (295)
Q Consensus       151 C~~C  154 (295)
                      |.+|
T Consensus        70 C~~C   73 (73)
T 2ctu_A           70 PSSG   73 (73)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8887

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.7e-13  Score=89.07  Aligned_cols=56  Identities=34%  Similarity=0.807  Sum_probs=33.4

Q ss_pred             CCCcccccc--ccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHh
Q psy17050         54 ERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        54 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  109 (295)
                      .++++|.|+  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            345556664  36666666666666666666666666666666666666666665554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.9e-12  Score=82.98  Aligned_cols=49  Identities=27%  Similarity=0.721  Sum_probs=30.2

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHH
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHL  168 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  168 (295)
                      +|.|.+|++.|.+...|..|++.|+      ++++|.|..|++.|.+...|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT------NEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT------SSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC------CCCCccCCCCCCccCCHHHHHHHH
Confidence            4566666666666666666666654      455666666666666666666665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.2e-12  Score=87.42  Aligned_cols=58  Identities=36%  Similarity=0.773  Sum_probs=41.2

Q ss_pred             HhCCCCcccCc--chhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhc
Q psy17050        108 VHTGEKPYVCP--ICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       108 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      .|.++++|.|+  .|++.|.+...|..|++.|+      ++++|.|.+|++.|.....|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHT------GQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC------CCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            35566677775  47777777777777777765      566777777777777777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=7e-12  Score=81.99  Aligned_cols=51  Identities=27%  Similarity=0.381  Sum_probs=23.1

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccc-cchhccCChHhHHHHHHHh
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR-YCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h  109 (295)
                      ++|.|..|++.|. ...|..|+++ +++++|.|. .|++.|.....|..|++.|
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            3444444444444 4444444444 444444444 4444444444444444444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=81.07  Aligned_cols=57  Identities=21%  Similarity=0.424  Sum_probs=41.2

Q ss_pred             CCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC-cCccccCCHHHHHHHHhhccCC
Q psy17050        110 TGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK-VCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       110 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      .++++|.|..|++.|. ...|..|+++ .      ++++|.|. .|++.|.....|..|+++|...
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-C------PRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-C------SSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-c------CCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            3556777777777777 7777777776 4      66777777 7777777777777777776543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.17  E-value=3.8e-11  Score=79.80  Aligned_cols=62  Identities=26%  Similarity=0.582  Sum_probs=43.7

Q ss_pred             CCCCCCCCCCceeccc--chhhccCHHHHHHHHHhcccccCCCCccccccc--cccccCChHHHHHHHHHh
Q psy17050         15 ASKGPPASPASHMCED--CGEEYWDRQSLLVHKARHDVIRTERGRIFPCHD--CGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        15 ~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h   81 (295)
                      .+.......++|.|..  |++.|.....|..|++.|.     ++++|.|.+  |++.|.....|..|+++|
T Consensus         7 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-----~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-----GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHS-----SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCCCccccCceeCCCCCCccccCCHHHHHHHHHhcC-----CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3444445567788877  8888877777777777774     567777754  777777777777777654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.17  E-value=6.1e-12  Score=75.92  Aligned_cols=42  Identities=48%  Similarity=0.765  Sum_probs=18.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      +++|+++++|.|.+|++.|.....|..|+++|+++++|+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333444444444444444444444444444444444444443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=75.89  Aligned_cols=43  Identities=42%  Similarity=0.658  Sum_probs=19.0

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.9e-12  Score=75.96  Aligned_cols=43  Identities=42%  Similarity=0.648  Sum_probs=19.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.8e-12  Score=76.38  Aligned_cols=44  Identities=36%  Similarity=0.570  Sum_probs=23.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.5e-12  Score=75.34  Aligned_cols=39  Identities=36%  Similarity=0.669  Sum_probs=15.9

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333444444444444444444444444444444444433

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.8e-12  Score=76.00  Aligned_cols=44  Identities=36%  Similarity=0.646  Sum_probs=22.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=6e-12  Score=75.97  Aligned_cols=43  Identities=37%  Similarity=0.628  Sum_probs=20.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.6e-12  Score=75.48  Aligned_cols=44  Identities=39%  Similarity=0.576  Sum_probs=21.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.6e-12  Score=75.74  Aligned_cols=43  Identities=37%  Similarity=0.617  Sum_probs=19.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.9e-12  Score=75.97  Aligned_cols=44  Identities=39%  Similarity=0.680  Sum_probs=20.5

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.2e-12  Score=75.57  Aligned_cols=41  Identities=39%  Similarity=0.626  Sum_probs=17.0

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            33344444444444444444444444444444444444433

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.3e-12  Score=75.81  Aligned_cols=44  Identities=39%  Similarity=0.661  Sum_probs=20.9

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.1e-12  Score=75.33  Aligned_cols=44  Identities=43%  Similarity=0.747  Sum_probs=21.9

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444445555555555555555555555555555555555444

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.15  E-value=6.4e-12  Score=75.80  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=21.2

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            33444444444554455555444445555444444444444443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.8e-12  Score=75.69  Aligned_cols=43  Identities=44%  Similarity=0.676  Sum_probs=19.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.7e-12  Score=76.05  Aligned_cols=44  Identities=41%  Similarity=0.695  Sum_probs=20.5

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.4e-12  Score=75.80  Aligned_cols=41  Identities=44%  Similarity=0.670  Sum_probs=17.1

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      ++|.++++|.|.+|++.|.....|..|+++|+++++|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            33344444444444444444444444444444444444433

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.3e-12  Score=75.84  Aligned_cols=43  Identities=40%  Similarity=0.669  Sum_probs=18.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3334444444444444444444444444444444444444433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=75.47  Aligned_cols=43  Identities=37%  Similarity=0.628  Sum_probs=18.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|+|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3334444444444444444444444444444444444444433

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.6e-12  Score=75.76  Aligned_cols=44  Identities=39%  Similarity=0.649  Sum_probs=21.3

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444445555555555555555555444444444544443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=6.3e-12  Score=75.80  Aligned_cols=44  Identities=36%  Similarity=0.537  Sum_probs=22.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.1e-12  Score=75.37  Aligned_cols=42  Identities=40%  Similarity=0.624  Sum_probs=18.8

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444433

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=75.46  Aligned_cols=44  Identities=39%  Similarity=0.676  Sum_probs=20.2

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=7.5e-12  Score=75.49  Aligned_cols=44  Identities=41%  Similarity=0.576  Sum_probs=22.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444445555555555555555555555555555555555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=6.4e-12  Score=75.82  Aligned_cols=42  Identities=38%  Similarity=0.676  Sum_probs=18.2

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333444444444444444444444444444444444444443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.5e-12  Score=75.47  Aligned_cols=43  Identities=40%  Similarity=0.598  Sum_probs=19.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.14  E-value=8e-12  Score=75.35  Aligned_cols=44  Identities=43%  Similarity=0.679  Sum_probs=22.6

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.1e-12  Score=75.90  Aligned_cols=37  Identities=46%  Similarity=0.736  Sum_probs=13.6

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.7e-12  Score=75.43  Aligned_cols=43  Identities=44%  Similarity=0.748  Sum_probs=19.3

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.14  E-value=3.7e-11  Score=79.85  Aligned_cols=56  Identities=43%  Similarity=0.862  Sum_probs=41.7

Q ss_pred             CCCccccccc--cccccCChHHHHHHHHHhcCCCCccccc--chhccCChHhHHHHHHHh
Q psy17050         54 ERGRIFPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVH  109 (295)
Q Consensus        54 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  109 (295)
                      ...++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456777877  8888877777888877777777777754  777777777777777654

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.8e-12  Score=75.43  Aligned_cols=42  Identities=33%  Similarity=0.491  Sum_probs=18.5

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      ++|.++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444433

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6e-12  Score=75.94  Aligned_cols=38  Identities=55%  Similarity=0.920  Sum_probs=14.4

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |.++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.3e-12  Score=75.08  Aligned_cols=44  Identities=39%  Similarity=0.678  Sum_probs=23.3

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6.6e-12  Score=75.77  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=20.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.3e-12  Score=75.27  Aligned_cols=44  Identities=32%  Similarity=0.403  Sum_probs=22.2

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.6e-12  Score=75.76  Aligned_cols=36  Identities=39%  Similarity=0.612  Sum_probs=13.1

Q ss_pred             cCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         82 TGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      .++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            8 SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             SCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            333333333333333333333333333333333333

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1e-11  Score=74.85  Aligned_cols=41  Identities=34%  Similarity=0.625  Sum_probs=17.6

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.6e-12  Score=75.27  Aligned_cols=34  Identities=44%  Similarity=0.864  Sum_probs=13.1

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR   90 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   90 (295)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3333333333333333333333333333333333

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=8.3e-12  Score=75.27  Aligned_cols=43  Identities=35%  Similarity=0.437  Sum_probs=19.7

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.8e-12  Score=75.43  Aligned_cols=44  Identities=36%  Similarity=0.608  Sum_probs=21.2

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            33444444444454455444444444445444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.6e-12  Score=75.76  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=27.0

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666555

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.8e-12  Score=74.98  Aligned_cols=41  Identities=41%  Similarity=0.736  Sum_probs=17.5

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      ++|+++++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.1e-11  Score=74.69  Aligned_cols=40  Identities=25%  Similarity=0.333  Sum_probs=16.1

Q ss_pred             HhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         80 IHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        80 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      +|.++++|.|.+|++.|.....|..|++.|+++++|+|.+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3333344444444444444444444444444444444433

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6.7e-12  Score=75.72  Aligned_cols=43  Identities=42%  Similarity=0.693  Sum_probs=18.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3334444444444444444444444444444444444444433

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.12  E-value=1.3e-11  Score=74.40  Aligned_cols=42  Identities=36%  Similarity=0.534  Sum_probs=19.3

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-11  Score=74.65  Aligned_cols=43  Identities=44%  Similarity=0.726  Sum_probs=20.9

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444444555555555555555555544444444454443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-11  Score=74.61  Aligned_cols=34  Identities=35%  Similarity=0.754  Sum_probs=13.3

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR   90 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   90 (295)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            3333333333333333333333333333333333

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.1e-11  Score=73.53  Aligned_cols=40  Identities=43%  Similarity=0.728  Sum_probs=17.7

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344444444444444444444444444444444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=74.12  Aligned_cols=43  Identities=42%  Similarity=0.613  Sum_probs=19.3

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHH-HhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHER-VHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++ .|.++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=5.1e-11  Score=74.51  Aligned_cols=43  Identities=30%  Similarity=0.641  Sum_probs=20.9

Q ss_pred             CCccccccccccccCChHHHHHHHH-HhcCCCCcccccchhccC
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQR-IHTGERPYSCRYCYKAFA   97 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~   97 (295)
                      ++++|.|.+|++.|.....|..|++ +|.++++|.|.+|++.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            3344555555555555555555543 444444455555544443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3e-11  Score=72.78  Aligned_cols=45  Identities=31%  Similarity=0.445  Sum_probs=37.7

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC------SSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcC------CCCCCCCCCC
Confidence            46778888888888888888888888888888875      7788888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=72.63  Aligned_cols=45  Identities=33%  Similarity=0.522  Sum_probs=37.7

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT------GERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS------CCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.08  E-value=3.2e-11  Score=72.69  Aligned_cols=45  Identities=38%  Similarity=0.557  Sum_probs=37.1

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS------SCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      6788888876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.1e-11  Score=72.73  Aligned_cols=45  Identities=33%  Similarity=0.533  Sum_probs=37.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT------TSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=72.76  Aligned_cols=45  Identities=31%  Similarity=0.436  Sum_probs=37.0

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHS------CCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            36777888888888888888888888888888876      7788888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.9e-11  Score=71.52  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=35.3

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA------EEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT------SSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            5567778888888888888888888888888875      6778888776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.2e-11  Score=72.68  Aligned_cols=45  Identities=31%  Similarity=0.444  Sum_probs=37.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH------CCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=72.63  Aligned_cols=45  Identities=33%  Similarity=0.624  Sum_probs=37.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH------CSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4e-11  Score=72.20  Aligned_cols=45  Identities=33%  Similarity=0.507  Sum_probs=36.6

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT------KQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS------CCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888875      6788888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.8e-11  Score=72.90  Aligned_cols=45  Identities=38%  Similarity=0.609  Sum_probs=35.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS------GKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGS------SCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc------CCCCCCCCCC
Confidence            46677778888888888888888888888888775      6777888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.3e-11  Score=72.62  Aligned_cols=45  Identities=27%  Similarity=0.484  Sum_probs=37.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF------REKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH------STTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      6788888877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.1e-11  Score=72.15  Aligned_cols=45  Identities=36%  Similarity=0.563  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT------GYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHT------CCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.8e-11  Score=72.29  Aligned_cols=45  Identities=31%  Similarity=0.478  Sum_probs=36.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT------AEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT------CCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46677888888888888888888888888888875      6788888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=72.64  Aligned_cols=45  Identities=36%  Similarity=0.534  Sum_probs=35.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT------GVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGS------CCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            36677788888888888888888888888888775      6778888776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=2e-10  Score=71.69  Aligned_cols=49  Identities=18%  Similarity=0.272  Sum_probs=43.3

Q ss_pred             CCCCCCCCceecccchhhccCHHHHHHHHH-hcccccCCCCccccccccccccCC
Q psy17050         17 KGPPASPASHMCEDCGEEYWDRQSLLVHKA-RHDVIRTERGRIFPCHDCGKTFNS   70 (295)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~C~~C~~~f~~   70 (295)
                      .....++++|.|.+|++.|.....|..|++ .|.     ++++|.|.+|++.|.+
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-----~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-----SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-----CCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-----CCCCccCCCCCCCCCC
Confidence            345567899999999999999999999997 774     7899999999999975

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=72.20  Aligned_cols=45  Identities=36%  Similarity=0.555  Sum_probs=35.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGC------CCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            46677788888888888888888888888887775      6778888776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=72.22  Aligned_cols=45  Identities=33%  Similarity=0.530  Sum_probs=36.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHS------SSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=3.2e-11  Score=72.66  Aligned_cols=45  Identities=27%  Similarity=0.375  Sum_probs=35.6

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS------SSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcC------CCCCcCCCCC
Confidence            46677788888888888888888888888888775      6778888776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.05  E-value=3.5e-11  Score=72.46  Aligned_cols=45  Identities=29%  Similarity=0.462  Sum_probs=34.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGG------CCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            36677777788888888888888888888887775      6777887766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.7e-11  Score=72.33  Aligned_cols=45  Identities=31%  Similarity=0.402  Sum_probs=35.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT------GENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT------TSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46677888888888888888888888888888875      6778888776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.3e-11  Score=72.61  Aligned_cols=45  Identities=31%  Similarity=0.466  Sum_probs=35.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS------CCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC------CCCCCCCCCC
Confidence            36677778888888888888888888888888775      6778888776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=3.2e-11  Score=72.70  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=34.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTS------CSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            46677777888888888888888888888887775      6777888776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.7e-11  Score=72.35  Aligned_cols=45  Identities=38%  Similarity=0.548  Sum_probs=36.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT------TCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888875      6778888876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.6e-11  Score=71.95  Aligned_cols=45  Identities=33%  Similarity=0.575  Sum_probs=36.1

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS------SCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            46777888888888888888888888888888875      6788888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.04  E-value=4.4e-11  Score=72.05  Aligned_cols=44  Identities=32%  Similarity=0.529  Sum_probs=35.7

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS------CCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            6677888888888888888888888888888875      6788888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.2e-11  Score=71.41  Aligned_cols=44  Identities=39%  Similarity=0.685  Sum_probs=23.4

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=3.1e-11  Score=72.72  Aligned_cols=45  Identities=31%  Similarity=0.479  Sum_probs=34.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT------GVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSS------SCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            46677777888888888888888888888887775      6777888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=72.28  Aligned_cols=45  Identities=31%  Similarity=0.467  Sum_probs=35.2

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTC------CCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            36667778888888888888888888888887775      6778888776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.3e-11  Score=72.09  Aligned_cols=45  Identities=33%  Similarity=0.527  Sum_probs=34.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTC------CCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcC------CCCCCCCCCC
Confidence            36667777788888888888888888888877775      6777888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.4e-11  Score=71.63  Aligned_cols=44  Identities=34%  Similarity=0.533  Sum_probs=34.8

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT------TCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            6677778888888888888888888888888775      6778888776

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.04  E-value=4.9e-11  Score=70.29  Aligned_cols=39  Identities=38%  Similarity=0.643  Sum_probs=18.8

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=71.87  Aligned_cols=45  Identities=33%  Similarity=0.583  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS------SCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888886      7788888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.4e-11  Score=71.64  Aligned_cols=44  Identities=34%  Similarity=0.558  Sum_probs=34.5

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |+++|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC------CSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhC------CCCCCCCCCC
Confidence            5667777888888888888888888888887775      6777888776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.3e-11  Score=72.05  Aligned_cols=45  Identities=31%  Similarity=0.518  Sum_probs=36.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT------GEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGS------CCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46777888888888888888888888888888875      6788888876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=5e-11  Score=71.82  Aligned_cols=40  Identities=43%  Similarity=0.743  Sum_probs=17.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.4e-11  Score=72.04  Aligned_cols=44  Identities=27%  Similarity=0.439  Sum_probs=33.7

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTS------CSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            6667777778888888888888888888877775      6777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.3e-11  Score=72.03  Aligned_cols=45  Identities=29%  Similarity=0.364  Sum_probs=35.0

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM------GEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTC------CSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            46677777888888888888888888888887775      6777888776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.4e-11  Score=70.77  Aligned_cols=45  Identities=27%  Similarity=0.269  Sum_probs=37.1

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM------GQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS------CCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            36677888888888888888888888888888886      7788888877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=7.6e-11  Score=70.97  Aligned_cols=44  Identities=27%  Similarity=0.451  Sum_probs=35.3

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC------CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC------CCCCCCCCCC
Confidence            5667788888888888888888888888888875      6778888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.03  E-value=4.3e-11  Score=72.07  Aligned_cols=45  Identities=33%  Similarity=0.504  Sum_probs=35.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS------GEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGT------SCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhC------CCCCCCCCCC
Confidence            36677788888888888888888888888888775      6778888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.9e-11  Score=71.47  Aligned_cols=44  Identities=34%  Similarity=0.512  Sum_probs=34.1

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM------GEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG------SCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            5667777788888888888888888888887775      6777888776

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=5.3e-11  Score=71.67  Aligned_cols=39  Identities=49%  Similarity=0.724  Sum_probs=16.2

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            333444444444444444444444444444444444443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=5.5e-11  Score=71.58  Aligned_cols=44  Identities=34%  Similarity=0.446  Sum_probs=33.5

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT------TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            5667777777888888888888888888877775      6777777776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.4e-11  Score=72.55  Aligned_cols=45  Identities=36%  Similarity=0.536  Sum_probs=36.2

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT------GGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH------SCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC------CCCCCCCCCC
Confidence            46677888888888888888888888888888876      6778888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.6e-11  Score=71.94  Aligned_cols=45  Identities=31%  Similarity=0.371  Sum_probs=34.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV------DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC------SCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            36667777788888888888888888888887775      6777888776

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.2e-11  Score=71.35  Aligned_cols=40  Identities=43%  Similarity=0.703  Sum_probs=17.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            3334444444444444444444444444444444444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.3e-11  Score=71.31  Aligned_cols=40  Identities=45%  Similarity=0.825  Sum_probs=17.7

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=5e-11  Score=74.52  Aligned_cols=50  Identities=22%  Similarity=0.398  Sum_probs=29.7

Q ss_pred             cccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcc
Q psy17050         66 KTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPY  115 (295)
Q Consensus        66 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  115 (295)
                      +.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34555555555666666666666666666666666666666666655554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.2e-10  Score=69.67  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=15.9

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCcccccc
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYC   92 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   92 (295)
                      +++|.|..|++.|.....|..|+++|+++++|.|++|
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            3344444444444444444444444444444444444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.5e-11  Score=69.43  Aligned_cols=38  Identities=34%  Similarity=0.671  Sum_probs=17.0

Q ss_pred             HhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         80 IHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        80 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +|.++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.1e-11  Score=71.39  Aligned_cols=40  Identities=38%  Similarity=0.658  Sum_probs=18.4

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.6e-11  Score=71.58  Aligned_cols=42  Identities=50%  Similarity=0.711  Sum_probs=20.3

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444444445544555554444455554444444444443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.2e-11  Score=71.37  Aligned_cols=40  Identities=43%  Similarity=0.748  Sum_probs=18.5

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.8e-11  Score=71.14  Aligned_cols=41  Identities=41%  Similarity=0.736  Sum_probs=18.9

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7e-11  Score=71.13  Aligned_cols=42  Identities=45%  Similarity=0.763  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.8e-11  Score=71.18  Aligned_cols=42  Identities=45%  Similarity=0.691  Sum_probs=20.1

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.2e-11  Score=70.60  Aligned_cols=43  Identities=37%  Similarity=0.517  Sum_probs=22.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3445555555555555555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.7e-11  Score=71.54  Aligned_cols=44  Identities=32%  Similarity=0.542  Sum_probs=34.2

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT------GERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC------SCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC------CCCCCCCCCC
Confidence            6667777788888888888888888888887775      6777888776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.01  E-value=7.5e-11  Score=70.99  Aligned_cols=44  Identities=25%  Similarity=0.417  Sum_probs=33.5

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT------REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC------CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            5566777778888888888888888888877775      6777777776

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.5e-11  Score=71.24  Aligned_cols=41  Identities=44%  Similarity=0.718  Sum_probs=19.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.1e-11  Score=71.38  Aligned_cols=45  Identities=36%  Similarity=0.533  Sum_probs=34.7

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTT------TSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            46677777888888888888888888888887775      6777888764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.4e-10  Score=70.50  Aligned_cols=39  Identities=31%  Similarity=0.555  Sum_probs=20.0

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccch
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCY   93 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   93 (295)
                      +.++|.|.+|++.|.....|..|+++|+++++|.|.+|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            334455555555555555555555555555555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.6e-11  Score=71.23  Aligned_cols=40  Identities=43%  Similarity=0.760  Sum_probs=18.2

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.1e-11  Score=71.38  Aligned_cols=39  Identities=49%  Similarity=0.877  Sum_probs=16.3

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|+|.+
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            333444444444444444444444444444444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7e-11  Score=71.12  Aligned_cols=42  Identities=43%  Similarity=0.702  Sum_probs=19.9

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.2e-11  Score=71.10  Aligned_cols=42  Identities=40%  Similarity=0.681  Sum_probs=19.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.9e-11  Score=70.67  Aligned_cols=39  Identities=36%  Similarity=0.705  Sum_probs=16.5

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.3e-11  Score=71.30  Aligned_cols=37  Identities=51%  Similarity=0.928  Sum_probs=14.2

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.5e-11  Score=70.76  Aligned_cols=42  Identities=40%  Similarity=0.739  Sum_probs=20.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|+++++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444445555555555555555555555555555555443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.2e-11  Score=71.12  Aligned_cols=41  Identities=41%  Similarity=0.721  Sum_probs=20.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            34444555555555555555555555555555555555543

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.4e-11  Score=71.00  Aligned_cols=42  Identities=43%  Similarity=0.748  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            344455555555555555555555555555555555555553

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.2e-11  Score=70.61  Aligned_cols=40  Identities=40%  Similarity=0.764  Sum_probs=17.8

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.4e-11  Score=70.97  Aligned_cols=42  Identities=48%  Similarity=0.789  Sum_probs=19.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.8e-11  Score=69.68  Aligned_cols=40  Identities=43%  Similarity=0.698  Sum_probs=18.0

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-11  Score=72.74  Aligned_cols=45  Identities=38%  Similarity=0.606  Sum_probs=34.2

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGS------SCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC------CCCCCCCCCC
Confidence            36667777778888888888888888888877775      6777877776

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.1e-11  Score=70.63  Aligned_cols=40  Identities=45%  Similarity=0.615  Sum_probs=18.3

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.2e-11  Score=71.10  Aligned_cols=38  Identities=26%  Similarity=0.488  Sum_probs=18.8

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccc
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYC   92 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   92 (295)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8e-11  Score=70.10  Aligned_cols=41  Identities=32%  Similarity=0.578  Sum_probs=20.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444555555555555555555555555555555555544

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=70.37  Aligned_cols=41  Identities=39%  Similarity=0.619  Sum_probs=18.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            33344444444444444444444444444444444444444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=69.32  Aligned_cols=44  Identities=34%  Similarity=0.596  Sum_probs=35.2

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC------CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            6677788888888888888888888888888875      6778888764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=9.7e-11  Score=69.71  Aligned_cols=40  Identities=40%  Similarity=0.581  Sum_probs=18.5

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=70.13  Aligned_cols=44  Identities=36%  Similarity=0.493  Sum_probs=34.3

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHH-HhcCCCCCCCCcceecCcC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIR-AHHSGPESKGATTFECKVC  154 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~~~~~~C~~C  154 (295)
                      |++.|.++++|.|.+|++.|.....|..|++ .|.      ++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~------~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT------GEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT------TSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcC------CCCCCCCCCC
Confidence            6667777888888888888888888888887 664      6777888776

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=9.1e-11  Score=69.06  Aligned_cols=41  Identities=44%  Similarity=0.738  Sum_probs=23.5

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.3e-10  Score=69.19  Aligned_cols=41  Identities=27%  Similarity=0.530  Sum_probs=21.6

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=9.8e-11  Score=70.49  Aligned_cols=42  Identities=29%  Similarity=0.429  Sum_probs=23.1

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCC-CCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTG-EKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|++ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34455555555555555555555555555555555 5555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.4e-10  Score=69.01  Aligned_cols=41  Identities=17%  Similarity=0.327  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            44445555555555555555555555555555555555554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=69.78  Aligned_cols=42  Identities=40%  Similarity=0.706  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|.++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555553

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=68.56  Aligned_cols=39  Identities=38%  Similarity=0.696  Sum_probs=18.6

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.94  E-value=1.7e-10  Score=67.92  Aligned_cols=36  Identities=36%  Similarity=0.688  Sum_probs=14.8

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCccc
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV  116 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  116 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|.
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            333444444444444444444444444444444443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1e-10  Score=70.41  Aligned_cols=33  Identities=39%  Similarity=0.729  Sum_probs=13.3

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      ++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A           11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444443333333

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=69.44  Aligned_cols=41  Identities=46%  Similarity=0.835  Sum_probs=22.1

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555553

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.93  E-value=2.2e-11  Score=78.52  Aligned_cols=47  Identities=26%  Similarity=0.526  Sum_probs=21.9

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSS  160 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~  160 (295)
                      |++.|.++++|.|+.|++.|.....|.   +.|.      ++++|.|..|++.|..
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~------~~k~~~C~~C~k~f~~   51 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDP------MTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEET------TTTEEBCSSSCCBCEE
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcC------CCCCEECCCCCCcccc
Confidence            444444445555555555554444443   3332      4444555555555443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=8.3e-10  Score=66.98  Aligned_cols=45  Identities=20%  Similarity=0.312  Sum_probs=39.7

Q ss_pred             CCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCcccccccccc
Q psy17050         17 KGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGK   66 (295)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~   66 (295)
                      .+...++++|+|.+|++.|.....|..|++.|.     ++++|.|.+|++
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----~~k~~~C~~C~k   48 (48)
T 2epr_A            4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHS-----GEKPYSSGPSSG   48 (48)
T ss_dssp             CSCCCCCCSEEETTTTEEESSHHHHHHHGGGSC-----SCCCCCSCCCCC
T ss_pred             CCCCCCCcCeeCCCCCcccCCHHHHHHHHHhcC-----CCCCccCCCCCC
Confidence            344566789999999999999999999999995     788999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=68.57  Aligned_cols=36  Identities=39%  Similarity=0.747  Sum_probs=14.0

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCccc
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYV  116 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  116 (295)
                      |.++++|.|.+|++.|.....|..|++.|.++++|.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            333333333333333333333333333333333333

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.5e-10  Score=67.92  Aligned_cols=37  Identities=24%  Similarity=0.439  Sum_probs=14.6

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|+++|+++++|+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3333334444444444444444444333333333333

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=6.3e-10  Score=66.50  Aligned_cols=41  Identities=32%  Similarity=0.571  Sum_probs=23.2

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchh
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICS  121 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  121 (295)
                      |.++++|.|.+|++.|.....|..|+++|+++++|.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44555555555555555555555555555555555555553

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.2e-10  Score=70.03  Aligned_cols=40  Identities=33%  Similarity=0.497  Sum_probs=17.6

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|+++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.91  E-value=3.2e-10  Score=68.14  Aligned_cols=44  Identities=32%  Similarity=0.516  Sum_probs=33.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHT------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHT------TSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhC------CCCCCCCCC
Confidence            36677777888888888888888888888888775      677777753

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=68.49  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=23.4

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555555

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=67.94  Aligned_cols=44  Identities=36%  Similarity=0.539  Sum_probs=33.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHC------CCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcC------CCCCCCCCC
Confidence            36677778888888888888888888888888775      677787753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.3e-10  Score=67.57  Aligned_cols=43  Identities=33%  Similarity=0.532  Sum_probs=33.4

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT------GEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHS------SSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcC------CCCCCCCCC
Confidence            6677778888888888888888888888888775      677787753

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.6e-10  Score=67.91  Aligned_cols=44  Identities=39%  Similarity=0.664  Sum_probs=33.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC------CCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC------CCCCCCCCC
Confidence            46677777888888888888888888888888875      677787753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.90  E-value=3.5e-10  Score=66.50  Aligned_cols=42  Identities=36%  Similarity=0.613  Sum_probs=26.8

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHA------GESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGC------CCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcC------CCCCCCCC
Confidence            4455666666666666666666666666666664      55666663

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.89  E-value=3.2e-11  Score=77.75  Aligned_cols=51  Identities=16%  Similarity=0.391  Sum_probs=37.8

Q ss_pred             HHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHH
Q psy17050         75 QIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRV  128 (295)
Q Consensus        75 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~  128 (295)
                      ..|+++|.++++|.|+.|++.|.....|.   +.|.++++|+|.+|++.|....
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCc
Confidence            45677777788888888888887777665   6677778888888887776543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.8e-10  Score=65.51  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=29.4

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT------VKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTS------CCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhC------CCCCCCCC
Confidence            4556677777777777777777777777777765      56677663

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.3e-10  Score=68.06  Aligned_cols=44  Identities=34%  Similarity=0.499  Sum_probs=31.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      +|++.|.++++|.|.+|++.|.....|..|+++|.      ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTT------TSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhC------CCCCCCCCC
Confidence            35667777777777777777777777777777765      667777753

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.9e-10  Score=67.78  Aligned_cols=43  Identities=37%  Similarity=0.605  Sum_probs=33.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.....|..|+++|+      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT------QETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHS------SCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            46677778888888888888888888888888875      67777775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.8e-10  Score=67.78  Aligned_cols=43  Identities=37%  Similarity=0.582  Sum_probs=31.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT------GEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSC------SSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhC------CCCCCCCC
Confidence            35667777777777777777777777777777775      66777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.4e-10  Score=67.15  Aligned_cols=44  Identities=27%  Similarity=0.420  Sum_probs=34.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT------GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT------SSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcC------CCCCCCCCC
Confidence            36677788888888888888888888888888875      677888763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4e-10  Score=67.70  Aligned_cols=42  Identities=36%  Similarity=0.571  Sum_probs=29.4

Q ss_pred             HHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      +.|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT------GEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTS------SSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhC------CCCCCCCCCC
Confidence            45666777777777777777777777777665      5667777665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.3e-10  Score=68.08  Aligned_cols=42  Identities=33%  Similarity=0.530  Sum_probs=30.1

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT------GEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTS------CCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhC------CCCCCCCC
Confidence            5666777777777777777777777777777765      66777775

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4e-10  Score=67.67  Aligned_cols=43  Identities=35%  Similarity=0.567  Sum_probs=31.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT------GENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS------SSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            36666777777777777777777777777777765      66777775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.6e-10  Score=67.03  Aligned_cols=44  Identities=39%  Similarity=0.576  Sum_probs=33.8

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCc
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV  153 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~  153 (295)
                      .|++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT------GEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHH------SCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcC------CCCCCCCCC
Confidence            36677777888888888888888888888888876      677787753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.87  E-value=4.2e-10  Score=70.20  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=33.4

Q ss_pred             hccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050         94 KAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        94 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      +.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence            456666777777777777777777777777777777777777775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.2e-10  Score=66.45  Aligned_cols=43  Identities=40%  Similarity=0.615  Sum_probs=31.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT------GESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTT------TSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhC------CCCCCCCC
Confidence            36667777777888888888888888888877775      66777764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.2e-10  Score=66.96  Aligned_cols=40  Identities=38%  Similarity=0.557  Sum_probs=18.5

Q ss_pred             HHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         78 QRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        78 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      +++|.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3444444444444444444444444444444444444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.5e-10  Score=66.77  Aligned_cols=42  Identities=36%  Similarity=0.514  Sum_probs=30.0

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcch
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPIC  120 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  120 (295)
                      ++|.++++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456667777777777777777777777777777777777665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=1e-09  Score=64.92  Aligned_cols=34  Identities=18%  Similarity=0.385  Sum_probs=15.8

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            3444444444444444444444444444444444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.8e-10  Score=66.71  Aligned_cols=34  Identities=47%  Similarity=0.729  Sum_probs=14.9

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      +++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.8e-10  Score=67.80  Aligned_cols=43  Identities=37%  Similarity=0.571  Sum_probs=31.4

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT------GEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC------CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcC------CCCCCCCC
Confidence            36667777777777777777777777777777765      66777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.9e-10  Score=67.78  Aligned_cols=42  Identities=36%  Similarity=0.541  Sum_probs=30.4

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT------GEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS------CSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcC------CCCCCCCC
Confidence            5666777777777777777777777777777765      66777775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.7e-10  Score=67.40  Aligned_cols=43  Identities=35%  Similarity=0.566  Sum_probs=32.7

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT------GERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHT------CCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcC------CCCCCCCC
Confidence            46667777788888888888888888888887775      66777775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=67.18  Aligned_cols=42  Identities=29%  Similarity=0.555  Sum_probs=30.8

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT------GERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTS------CCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhC------CCCCCCCC
Confidence            5666777777777777777777777777777765      66777775

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.3e-10  Score=68.19  Aligned_cols=39  Identities=36%  Similarity=0.655  Sum_probs=16.8

Q ss_pred             hcCCCCcccc--cchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         81 HTGERPYSCR--YCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        81 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      |.++++|.|.  .|++.|.....|..|++.|.++++|+|.+
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344444443  34444444444444444444444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.3e-10  Score=67.54  Aligned_cols=43  Identities=35%  Similarity=0.519  Sum_probs=31.7

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      .|++.|.++++|.|.+|++.|.....|..|++.|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT------GEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTC------CSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            36667777777777777777777777777777765      66777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.5e-10  Score=67.51  Aligned_cols=43  Identities=33%  Similarity=0.563  Sum_probs=30.3

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT------GEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGT------TCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcC------CCCCCCCC
Confidence            35666777777777777777777777777777765      56677765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.1e-10  Score=66.60  Aligned_cols=42  Identities=33%  Similarity=0.529  Sum_probs=30.2

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT------GERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCS------SCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            5566777777777777777777777777777765      66777765

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5e-10  Score=67.29  Aligned_cols=42  Identities=33%  Similarity=0.547  Sum_probs=30.8

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|.      ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT------GEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS------SSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcC------CCCCCCCC
Confidence            5666777777777777777777777777777765      66777775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.3e-10  Score=67.53  Aligned_cols=43  Identities=40%  Similarity=0.620  Sum_probs=30.5

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+      ++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT------GEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTS------SCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcC------CCCCCCCC
Confidence            35666777777777777777777777777777765      56677775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.2e-10  Score=66.84  Aligned_cols=42  Identities=36%  Similarity=0.544  Sum_probs=29.1

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.+...|..|++.|+      ++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR------GEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGC------SCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhC------CCCCCCCC
Confidence            5566667777777777777777777777777664      56667665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.2e-10  Score=67.58  Aligned_cols=42  Identities=38%  Similarity=0.632  Sum_probs=29.8

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT------GEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTS------SCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcC------CCCCcCCC
Confidence            5666777777777777777777777777777664      56677765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5e-10  Score=66.53  Aligned_cols=43  Identities=37%  Similarity=0.596  Sum_probs=29.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT------GESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTC------CSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcC------CCCCCCCC
Confidence            35666777777777777777777777777777664      56667663

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7e-10  Score=66.64  Aligned_cols=38  Identities=32%  Similarity=0.622  Sum_probs=30.2

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCccccc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY   91 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   91 (295)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            8 TGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            36678888888888888888888888888888888863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=5.2e-10  Score=66.50  Aligned_cols=41  Identities=29%  Similarity=0.555  Sum_probs=28.0

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      |+++|.++++|.|.+|++.|.....|..|++.|+      ++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA------RKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCC------CCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcC------CCCCCCC
Confidence            5566666777777777777777777777777664      5666666

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.2e-10  Score=76.76  Aligned_cols=66  Identities=26%  Similarity=0.323  Sum_probs=49.0

Q ss_pred             HhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        100 GTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       100 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ..|..|+..|.+.+++.|..|++.|. ...|..|. .+.      ++++|.|+.|++.|. ...|..|+++|.++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c------~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC------GARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH------HHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc------CCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            34666777777788888888888884 77788887 554      677888888888776 47777888777654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6e-10  Score=66.17  Aligned_cols=42  Identities=31%  Similarity=0.553  Sum_probs=29.9

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS------GQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSS------SSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcC------CCCCCCCC
Confidence            5666777777777777777777777777777765      56677663

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.9e-10  Score=66.63  Aligned_cols=37  Identities=43%  Similarity=0.830  Sum_probs=15.3

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3333444444444444444444444444444444443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.6e-10  Score=66.74  Aligned_cols=42  Identities=33%  Similarity=0.548  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.7e-10  Score=65.90  Aligned_cols=41  Identities=41%  Similarity=0.660  Sum_probs=28.6

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT------GSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTS------CCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhC------CCCCCCC
Confidence            5566677777777777777777777777777665      5666665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.81  E-value=1.2e-09  Score=64.03  Aligned_cols=41  Identities=32%  Similarity=0.516  Sum_probs=26.4

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      |++.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~------~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS------QSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTT------CCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcC------CCCCCCC
Confidence            4455666666666666666666666666666664      5566655

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.6e-09  Score=63.22  Aligned_cols=37  Identities=43%  Similarity=0.837  Sum_probs=16.8

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3444444444444444444444444444444444443

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=7.5e-10  Score=66.43  Aligned_cols=43  Identities=37%  Similarity=0.567  Sum_probs=30.6

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|++.|.++++|.|.+|++.|.....|..|++.|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT------GKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSC------CCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            35666777777777777777777777777777765      66677765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.1e-10  Score=64.66  Aligned_cols=41  Identities=34%  Similarity=0.580  Sum_probs=28.3

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      |+++|.++++|.|..|++.|.+...|..|++.|.      ++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT------GSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHH------SCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcC------CCCCCCC
Confidence            4556667777777777777777777777777765      5666665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=7.6e-10  Score=65.76  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=28.1

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      .|++.|.++++|.|.+|++.|.....|..|++.|.      ++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~------~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHA------AKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGC------CCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcC------CCCCcCC
Confidence            35566666677777777777777777777776664      5666666

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.8e-09  Score=64.09  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=31.1

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      |++.|.++++|.|.+|++.|.....|..|+++|.      ++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHA------GESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHT------TSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHC------CCCCCCCC
Confidence            4566777777788888888887777788877775      66777773

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6e-10  Score=66.90  Aligned_cols=43  Identities=28%  Similarity=0.482  Sum_probs=31.0

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.      ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE------RTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHH------HSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhC------CCCCCCCC
Confidence            35666777777777777777777777777777775      56677764

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.2e-09  Score=64.12  Aligned_cols=36  Identities=36%  Similarity=0.688  Sum_probs=30.1

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            367788888888888888888888888888888877

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.1e-09  Score=65.83  Aligned_cols=37  Identities=30%  Similarity=0.536  Sum_probs=29.8

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcC-CCCccccc
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTG-ERPYSCRY   91 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~   91 (295)
                      ++++|.|.+|++.|.....|..|+++|++ +++|.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            9 KEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788888888888888888888888888 88888763

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-09  Score=65.01  Aligned_cols=37  Identities=32%  Similarity=0.666  Sum_probs=30.1

Q ss_pred             CCCccccccccccccCChHHHHHHHHHhcCCCCcccc
Q psy17050         54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCR   90 (295)
Q Consensus        54 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   90 (295)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            8 TGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667888888888888888888888888888888875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.6e-10  Score=77.47  Aligned_cols=62  Identities=19%  Similarity=0.273  Sum_probs=30.7

Q ss_pred             HHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050         74 QQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        74 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |..|+..|.+++++.|..|++.|. ...|..|+ .|.+++++.|+.|++.|.. ..|..|++++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~   66 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCG   66 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHcc
Confidence            334444455555555555555552 45555555 4445555555555554442 44555555443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=9.2e-10  Score=65.39  Aligned_cols=42  Identities=26%  Similarity=0.398  Sum_probs=30.9

Q ss_pred             HHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|+      ++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~------~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT------RKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC------CCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhC------CCCCCCC
Confidence            35667777777777777777777777777777775      6677776

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5.5e-09  Score=62.62  Aligned_cols=40  Identities=38%  Similarity=0.576  Sum_probs=28.9

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      ++|+++++|.|.+|++.|.....|..|++.|+++++|+|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4566777777777777777777777777777777777775

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=63.19  Aligned_cols=41  Identities=37%  Similarity=0.588  Sum_probs=25.0

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceec
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFEC  151 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C  151 (295)
                      |+++|.++++|.|.+|++.|.....|..|+++|+      ++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA------GVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGS------SCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhc------CCCCCCC
Confidence            4555666666666666666666666666666654      4555554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=1.1e-08  Score=60.27  Aligned_cols=40  Identities=18%  Similarity=0.336  Sum_probs=29.9

Q ss_pred             HhcCCCCcccccchhccCChHhHHHHHHHhCCCCcccCcc
Q psy17050         80 IHTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPI  119 (295)
Q Consensus        80 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  119 (295)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4667777777777777777777777777777777777753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3e-09  Score=64.30  Aligned_cols=43  Identities=30%  Similarity=0.476  Sum_probs=28.8

Q ss_pred             HHHhCCCCcccCc--chhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcC
Q psy17050        106 ERVHTGEKPYVCP--ICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVC  154 (295)
Q Consensus       106 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C  154 (295)
                      .+.|.++++|.|.  .|++.|.....|..|+++|.      ++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~------~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS------GVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC------CCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC------CCCCCCCCCC
Confidence            3456666777776  67777777777777776664      5666777665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.9e-09  Score=63.52  Aligned_cols=40  Identities=33%  Similarity=0.587  Sum_probs=24.9

Q ss_pred             HHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecC
Q psy17050        107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECK  152 (295)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~  152 (295)
                      +.|.++++|.|.+|++.|.+...|..|+++|.      ++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~------~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT------GEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTS------SCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhC------CCCCCCCC
Confidence            34556666666666666666666666666654      55666664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.63  E-value=1.8e-08  Score=57.92  Aligned_cols=34  Identities=24%  Similarity=0.434  Sum_probs=16.7

Q ss_pred             CccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      +++|.|..|++.|.....|..|+++|+++++|.+
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3445555555555555555555555555444443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.7e-08  Score=58.74  Aligned_cols=35  Identities=43%  Similarity=0.944  Sum_probs=24.2

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCccc
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSC   89 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   89 (295)
                      ++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            55667777777777777777777777777776665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2e-08  Score=56.94  Aligned_cols=24  Identities=21%  Similarity=0.519  Sum_probs=8.8

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      +|.|..|++.|.....|..|+++|
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~h   32 (37)
T 2elo_A            9 SYSCPVCEKSFSEDRLIKSHIKTN   32 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHH
T ss_pred             CcCCCCCCCccCCHHHHHHHHHHH
Confidence            333333333333333333333333

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.55  E-value=2e-08  Score=56.90  Aligned_cols=26  Identities=31%  Similarity=0.778  Sum_probs=9.6

Q ss_pred             cCCCCcccccchhccCChHhHHHHHH
Q psy17050         82 TGERPYSCRYCYKAFADGGTLRKHER  107 (295)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~L~~H~~  107 (295)
                      .++++|.|..|++.|.....|..|++
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A            7 TGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCCCccCCCCCcccCcHHHHHHHHH
Confidence            33333333333333333333333333

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=9.4e-08  Score=52.67  Aligned_cols=30  Identities=23%  Similarity=0.375  Sum_probs=16.7

Q ss_pred             cccccccccccCChHHHHHHHHHhcCCCCc
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGERPY   87 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   87 (295)
                      +|.|..|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=9.3e-10  Score=76.04  Aligned_cols=52  Identities=15%  Similarity=0.284  Sum_probs=27.8

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHhC
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      ++++|.|..|++.|.....|..|+++|+++++|.|..|.    ....|..|.+.|.
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            445566666666666666666666666555556554432    2333444444444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=7.9e-08  Score=61.79  Aligned_cols=35  Identities=20%  Similarity=0.400  Sum_probs=17.0

Q ss_pred             CCccccccc--cccccCChHHHHHHH-HHhcCCCCccc
Q psy17050         55 RGRIFPCHD--CGKTFNSRSSQQIHQ-RIHTGERPYSC   89 (295)
Q Consensus        55 ~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C   89 (295)
                      +++||+|.+  |++.|.....|..|+ ++|++++||.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            444555533  555555555555554 34555555444

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.49  E-value=8.3e-08  Score=55.03  Aligned_cols=37  Identities=24%  Similarity=0.554  Sum_probs=23.0

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhCCCCcccC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVC  117 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  117 (295)
                      |.++++|.|.+|++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.48  E-value=6.9e-08  Score=53.76  Aligned_cols=27  Identities=30%  Similarity=0.359  Sum_probs=11.1

Q ss_pred             ccccccccccccCChHHHHHHHHHhcC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++|.|..|++.|.....|..|++.|++
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            334444444444444444444444433

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.45  E-value=8.4e-08  Score=53.47  Aligned_cols=27  Identities=30%  Similarity=0.629  Sum_probs=11.9

Q ss_pred             ccccccccccccCChHHHHHHHHHhcC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            344444444444444444444444443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=1.6e-07  Score=60.31  Aligned_cols=25  Identities=20%  Similarity=0.348  Sum_probs=12.5

Q ss_pred             CCCCceeccc--chhhccCHHHHHHHH
Q psy17050         21 ASPASHMCED--CGEEYWDRQSLLVHK   45 (295)
Q Consensus        21 ~~~~~~~C~~--C~~~f~~~~~l~~H~   45 (295)
                      +++|||+|.+  |++.|.....|..|+
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~   49 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHY   49 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHH
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHh
Confidence            3445555533  555555555555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.44  E-value=1.3e-07  Score=52.02  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=21.2

Q ss_pred             CCcccccchhccCChHhHHHHHHHhCCCCccc
Q psy17050         85 RPYSCRYCYKAFADGGTLRKHERVHTGEKPYV  116 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  116 (295)
                      ++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35666667777766666777766666666654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.39  E-value=9.8e-08  Score=53.93  Aligned_cols=33  Identities=36%  Similarity=0.701  Sum_probs=15.6

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHh
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      |++.|.++++|.|+.|++.|.+...|..|++.|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            334444444444444444444444444444444

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.7e-07  Score=52.94  Aligned_cols=24  Identities=33%  Similarity=0.804  Sum_probs=8.6

Q ss_pred             CCcccccchhccCChHhHHHHHHH
Q psy17050         85 RPYSCRYCYKAFADGGTLRKHERV  108 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H~~~  108 (295)
                      ++|.|.+|++.|.....|..|++.
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHH
Confidence            333333333333333333333333

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=5.3e-07  Score=51.34  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=22.6

Q ss_pred             CCCcceecCc--CccccCCHHHHHHHHhhccCC
Q psy17050        144 KGATTFECKV--CGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       144 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      .++++|.|.+  |++.|.....|..|+++|.+.
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3677777765  777777777777777777653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=3.5e-07  Score=52.12  Aligned_cols=29  Identities=24%  Similarity=0.545  Sum_probs=13.6

Q ss_pred             CCccccccc--cccccCChHHHHHHHHHhcC
Q psy17050         55 RGRIFPCHD--CGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        55 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++++|.|.+  |++.|.....|..|+++|++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            344444443  44444444444444444443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.5e-08  Score=68.04  Aligned_cols=30  Identities=20%  Similarity=0.517  Sum_probs=15.1

Q ss_pred             hCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        109 HTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |.++++|.|..|++.|.....|..|+++|.
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht   49 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHN   49 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhC
Confidence            444455555555555555555555555443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=4.1e-07  Score=50.85  Aligned_cols=26  Identities=23%  Similarity=0.562  Sum_probs=10.9

Q ss_pred             ccccccccccccCChHHHHHHHHHhc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            34444444444444444444444443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.29  E-value=6.6e-07  Score=49.60  Aligned_cols=30  Identities=23%  Similarity=0.431  Sum_probs=20.1

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++++|.|..|++.|.....|..|+++|+++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            556677777777777777777776666654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=4.8e-07  Score=50.63  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=10.8

Q ss_pred             ccccccccccccCChHHHHHHHHHhc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            34444444444444444444444433

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.27  E-value=8.3e-07  Score=49.23  Aligned_cols=30  Identities=27%  Similarity=0.675  Sum_probs=21.8

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++++|.|..|++.|.....|..|+++|.++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            566777777777777777777777777654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=3.6e-07  Score=51.89  Aligned_cols=33  Identities=21%  Similarity=0.569  Sum_probs=17.4

Q ss_pred             CCcccccc--ccccccCChHHHHHHHHHhcCCCCc
Q psy17050         55 RGRIFPCH--DCGKTFNSRSSQQIHQRIHTGERPY   87 (295)
Q Consensus        55 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   87 (295)
                      ++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            34455555  3555555555555555555555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4.2e-07  Score=50.91  Aligned_cols=26  Identities=23%  Similarity=0.648  Sum_probs=11.1

Q ss_pred             ccccccccccccCChHHHHHHHHHhc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhc
Confidence            34444444444444444444444443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=2.5e-07  Score=52.21  Aligned_cols=28  Identities=36%  Similarity=0.552  Sum_probs=12.3

Q ss_pred             CccccccccccccCCh-HHHHHHHHHhcC
Q psy17050         56 GRIFPCHDCGKTFNSR-SSQQIHQRIHTG   83 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~-~~l~~H~~~h~~   83 (295)
                      +++|.|..|++.|... ..|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            3444444444444444 444444444433

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=6.1e-07  Score=50.12  Aligned_cols=29  Identities=34%  Similarity=0.761  Sum_probs=14.0

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcC
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++++|.|.+|++.|.....|..|+++|++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            33444455555555544445555444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.3e-07  Score=49.86  Aligned_cols=28  Identities=50%  Similarity=0.911  Sum_probs=13.1

Q ss_pred             CccccccccccccCChHHHHHHHHHhcC
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            3444444444444444444444444443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.21  E-value=4.8e-07  Score=50.79  Aligned_cols=24  Identities=38%  Similarity=0.682  Sum_probs=13.2

Q ss_pred             CCccccccccccccCChHHHHHHH
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQ   78 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~   78 (295)
                      ++++|.|..|++.|.....|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            445555555555555555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1.6e-06  Score=48.38  Aligned_cols=27  Identities=33%  Similarity=0.743  Sum_probs=13.4

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhc
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++++|.|.+|++.|.....|..|++.|
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLH   32 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHh
Confidence            344455555555555555555555444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.18  E-value=6e-07  Score=54.06  Aligned_cols=24  Identities=42%  Similarity=0.870  Sum_probs=9.3

Q ss_pred             CCcccCcchhhhcCCHHHHHHHHH
Q psy17050        112 EKPYVCPICSKAFNQRVVLREHIR  135 (295)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~  135 (295)
                      +++|.|.+|++.|.....|..|++
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CcCEECCCcCcccCCHHHHHHHhh
Confidence            333333333333333333333333

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=2e-06  Score=47.95  Aligned_cols=27  Identities=26%  Similarity=0.354  Sum_probs=13.4

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhc
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++++|+|.+|++.|.....|..|++.|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            344455555555555555555555444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=2.1e-06  Score=47.89  Aligned_cols=30  Identities=17%  Similarity=0.551  Sum_probs=22.3

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++++|.|.+|++.|.....|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            567777777777777777777777777653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.9e-06  Score=48.09  Aligned_cols=29  Identities=28%  Similarity=0.594  Sum_probs=19.8

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++++|.|.+|++.|.....|..|+++|.+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            56667777777777777777777666654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=2e-06  Score=47.94  Aligned_cols=29  Identities=28%  Similarity=0.402  Sum_probs=17.9

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      .++++|+|..|++.|.....|..|++.|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            34556666666666666666666666653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=2.1e-06  Score=45.09  Aligned_cols=25  Identities=32%  Similarity=0.660  Sum_probs=11.7

Q ss_pred             ccccccccccCChHHHHHHHHHhcC
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      |.|..|++.|.....|..|+++|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcC
Confidence            4444444444444444444444443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.13  E-value=1.1e-06  Score=49.35  Aligned_cols=25  Identities=32%  Similarity=0.643  Sum_probs=14.1

Q ss_pred             CCCCceecccchhhccCHHHHHHHH
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHK   45 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~   45 (295)
                      .++++|+|.+|++.|.....|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.8e-06  Score=48.81  Aligned_cols=35  Identities=20%  Similarity=0.508  Sum_probs=20.7

Q ss_pred             hcCCCCcccc--cchhccCChHhHHHHHHHhCCCCcc
Q psy17050         81 HTGERPYSCR--YCYKAFADGGTLRKHERVHTGEKPY  115 (295)
Q Consensus        81 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~  115 (295)
                      |+++++|.|.  .|++.|.....|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3455566666  3666666666666666666655554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=1.8e-06  Score=44.67  Aligned_cols=25  Identities=24%  Similarity=0.537  Sum_probs=17.8

Q ss_pred             cceecCcCccccCCHHHHHHHHhhc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5677777777777777777777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=2e-06  Score=45.48  Aligned_cols=28  Identities=25%  Similarity=0.638  Sum_probs=19.1

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777766543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=1.9e-06  Score=44.97  Aligned_cols=26  Identities=27%  Similarity=0.595  Sum_probs=19.3

Q ss_pred             cceecCcCccccCCHHHHHHHHhhcc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777777664

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=1.9e-06  Score=45.30  Aligned_cols=28  Identities=25%  Similarity=0.506  Sum_probs=21.5

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3678888888888888888888877654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=1.5e-06  Score=45.69  Aligned_cols=24  Identities=29%  Similarity=0.692  Sum_probs=10.6

Q ss_pred             ccccccccccCChHHHHHHHHHhc
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      |.|..|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhc
Confidence            444444444444444444444443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.6e-06  Score=45.05  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=18.4

Q ss_pred             cceecCcCccccCCHHHHHHHHhhc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=1.9e-06  Score=45.57  Aligned_cols=24  Identities=29%  Similarity=0.605  Sum_probs=9.5

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      +|.|..|++.|.....|..|++.|
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHHh
Confidence            334444444444444444443333

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=2.5e-06  Score=44.77  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=17.3

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            46666666666666666666666654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.08  E-value=1.7e-07  Score=51.12  Aligned_cols=28  Identities=25%  Similarity=0.417  Sum_probs=12.5

Q ss_pred             cccccchhccCChHhHHHHHHHhCCCCc
Q psy17050         87 YSCRYCYKAFADGGTLRKHERVHTGEKP  114 (295)
Q Consensus        87 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~  114 (295)
                      |.|..|++.|.....|..|+++|+++++
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            4444444444444444444444444433

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.07  E-value=1.1e-07  Score=51.88  Aligned_cols=30  Identities=20%  Similarity=0.303  Sum_probs=18.0

Q ss_pred             cccccccccccCChHHHHHHHHHhcCCCCc
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGERPY   87 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   87 (295)
                      +|.|..|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455666666666666666666666655554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=2.3e-06  Score=44.89  Aligned_cols=26  Identities=38%  Similarity=0.893  Sum_probs=12.2

Q ss_pred             cccccccccccCChHHHHHHHHHhcC
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      +|.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34444444444444444444444443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=48.84  Aligned_cols=29  Identities=38%  Similarity=0.731  Sum_probs=14.3

Q ss_pred             CCccccccc--cccccCChHHHHHHHHHhcC
Q psy17050         55 RGRIFPCHD--CGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        55 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++++|.|.+  |++.|.....|..|+++|++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            344455542  55555555555555555444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.06  E-value=2.9e-06  Score=44.83  Aligned_cols=26  Identities=15%  Similarity=0.382  Sum_probs=12.3

Q ss_pred             ccccccccccCChHHHHHHHHHhcCC
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      |.|..|++.|.....|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccC
Confidence            44444444444444444444444433

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=3.1e-06  Score=47.49  Aligned_cols=33  Identities=27%  Similarity=0.532  Sum_probs=19.8

Q ss_pred             HhcCCCCcccccchhccCCh-HhHHHHHHHhCCC
Q psy17050         80 IHTGERPYSCRYCYKAFADG-GTLRKHERVHTGE  112 (295)
Q Consensus        80 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~  112 (295)
                      +|.++++|.|.+|++.|... ..|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            35556666666666666666 6666666665543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=1.2e-06  Score=49.35  Aligned_cols=29  Identities=21%  Similarity=0.411  Sum_probs=17.0

Q ss_pred             CCcceecCcCccccCCHHHHHHH-HhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQH-LVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  173 (295)
                      ++++|.|..|++.|.....|..| ++.|.+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            45566666666666666666666 555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=3.6e-07  Score=54.77  Aligned_cols=32  Identities=22%  Similarity=0.456  Sum_probs=15.6

Q ss_pred             HhcCCCCcccc--cchhccCChHhHHHHHHHhCC
Q psy17050         80 IHTGERPYSCR--YCYKAFADGGTLRKHERVHTG  111 (295)
Q Consensus        80 ~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~  111 (295)
                      .|.++++|.|.  .|++.|.....|..|++.|++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            34445555553  355555555555555554444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.04  E-value=2.9e-06  Score=44.83  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=19.1

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            567777777777777777777776654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=2.7e-06  Score=44.58  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=14.9

Q ss_pred             cccccccccccCChHHHHHHHHHhcCC
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=3.1e-06  Score=43.74  Aligned_cols=25  Identities=20%  Similarity=0.353  Sum_probs=14.4

Q ss_pred             CceecccchhhccCHHHHHHHHHhc
Q psy17050         24 ASHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++|.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4555666666665555566555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.4e-06  Score=44.22  Aligned_cols=26  Identities=35%  Similarity=0.686  Sum_probs=17.1

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            46666666666666666666666654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.00  E-value=3.1e-06  Score=50.82  Aligned_cols=33  Identities=24%  Similarity=0.581  Sum_probs=28.0

Q ss_pred             CCCcceecCcCccccCCHHHHHHHHh-hccCCCC
Q psy17050        144 KGATTFECKVCGCMLSSSPELCQHLV-QHSDENT  176 (295)
Q Consensus       144 ~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~  176 (295)
                      .++++|.|.+|++.|.....|..|++ +|.++..
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            37899999999999999999999999 8877643

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=2.6e-06  Score=44.14  Aligned_cols=25  Identities=24%  Similarity=0.278  Sum_probs=14.7

Q ss_pred             CceecccchhhccCHHHHHHHHHhc
Q psy17050         24 ASHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++|+|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666665544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=3.4e-06  Score=43.50  Aligned_cols=26  Identities=19%  Similarity=0.494  Sum_probs=18.8

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            36777777777777777777777754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=3.2e-06  Score=44.27  Aligned_cols=28  Identities=21%  Similarity=0.392  Sum_probs=19.8

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3577777777777777777777777653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=3.1e-06  Score=44.13  Aligned_cols=24  Identities=21%  Similarity=0.480  Sum_probs=10.6

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      +|.|..|++.|.....|..|++.|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CccCCCCCcccCCHHHHHHHHHhc
Confidence            344444444444444444444433

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.97  E-value=6e-06  Score=46.37  Aligned_cols=27  Identities=30%  Similarity=0.581  Sum_probs=13.9

Q ss_pred             CCCceeccc--chhhccCHHHHHHHHHhc
Q psy17050         22 SPASHMCED--CGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        22 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h   48 (295)
                      ++++|.|.+  |++.|.....|..|++.|
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            344555542  555555555555555544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.97  E-value=4.7e-06  Score=44.63  Aligned_cols=21  Identities=48%  Similarity=0.817  Sum_probs=9.2

Q ss_pred             ccccccCChHHHHHHHHHhcC
Q psy17050         63 DCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        63 ~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      .|++.|.....|..|+++|++
T Consensus         9 ~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCCcccCCHhHHHHHHHHhcC
Confidence            444444444444444444433

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=5.7e-06  Score=44.31  Aligned_cols=28  Identities=36%  Similarity=0.638  Sum_probs=20.3

Q ss_pred             cceecC--cCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECK--VCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|.  .|++.|.....|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            357776  7777777777777777777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=1e-06  Score=46.46  Aligned_cols=23  Identities=43%  Similarity=0.694  Sum_probs=8.8

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      |.|..|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            33333333333333333333333

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.96  E-value=3.9e-06  Score=43.27  Aligned_cols=22  Identities=36%  Similarity=0.759  Sum_probs=8.9

Q ss_pred             cccccccccCChHHHHHHHHHh
Q psy17050         60 PCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        60 ~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      .|..|++.|.....|..|+++|
T Consensus         3 ~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            3 KCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cCCCCCCcCCCHHHHHHHHHHc
Confidence            3444444444444444444333

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=5.9e-06  Score=44.55  Aligned_cols=28  Identities=18%  Similarity=0.503  Sum_probs=21.2

Q ss_pred             cceecC--cCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECK--VCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567787  6888888888888888777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.95  E-value=9.4e-06  Score=52.25  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=19.0

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ..++++|+|.+|++.|.....|..|++.|.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            344566666666666666666666666664

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.94  E-value=6.2e-06  Score=44.47  Aligned_cols=26  Identities=23%  Similarity=0.554  Sum_probs=11.5

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhcC
Q psy17050         58 IFPCH--DCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        58 ~~~C~--~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      +|.|.  .|++.|.....|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            34444  444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.94  E-value=5e-06  Score=53.56  Aligned_cols=27  Identities=33%  Similarity=0.653  Sum_probs=11.9

Q ss_pred             ccccccccccccCChHHHHHHHHHhcC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ++|.|..|++.|.....|..|+++|++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            444444444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.16  E-value=1.3e-06  Score=46.04  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=15.8

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +|.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45666666666666666666665544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=46.19  Aligned_cols=23  Identities=35%  Similarity=0.752  Sum_probs=8.7

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      |.|..|++.|.....|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            33333333333333333333333

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=46.00  Aligned_cols=27  Identities=19%  Similarity=0.434  Sum_probs=16.0

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            355666666666666666666655543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=1.7e-06  Score=44.36  Aligned_cols=24  Identities=29%  Similarity=0.726  Sum_probs=14.4

Q ss_pred             ceecCcCccccCCHHHHHHHHhhc
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      +|.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455666666666666666665554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.02  E-value=2.7e-06  Score=43.55  Aligned_cols=21  Identities=29%  Similarity=0.657  Sum_probs=8.4

Q ss_pred             eecccchhhccCHHHHHHHHH
Q psy17050         26 HMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      |.|..||+.|.....|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            334444444443334444433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.81  E-value=7.6e-06  Score=43.26  Aligned_cols=19  Identities=26%  Similarity=0.653  Sum_probs=8.0

Q ss_pred             ccccccccccCChHHHHHH
Q psy17050         59 FPCHDCGKTFNSRSSQQIH   77 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H   77 (295)
                      |.|..|++.|.....|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            3444444444444444444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.78  E-value=1e-05  Score=42.76  Aligned_cols=27  Identities=22%  Similarity=0.506  Sum_probs=19.7

Q ss_pred             ceecCcCccccCCHHHHHHH-HhhccCC
Q psy17050        148 TFECKVCGCMLSSSPELCQH-LVQHSDE  174 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H-~~~h~~~  174 (295)
                      +|.|..|++.|.....|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            57788888888888888888 5666543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=2.8e-06  Score=50.76  Aligned_cols=32  Identities=31%  Similarity=0.594  Sum_probs=26.1

Q ss_pred             CCCcccccc--ccccccCChHHHHHHHHHhcCCC
Q psy17050         54 ERGRIFPCH--DCGKTFNSRSSQQIHQRIHTGER   85 (295)
Q Consensus        54 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   85 (295)
                      .++++|.|.  .|++.|.....|..|+++|++++
T Consensus        14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            367888995  69999998888999988888763

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.70  E-value=5e-05  Score=48.53  Aligned_cols=52  Identities=13%  Similarity=0.395  Sum_probs=24.4

Q ss_pred             hhhhcCCHHHHHHHHHHhcCCCC-CCCCcceecC--cCccccCCHHHHHHHHhhc
Q psy17050        120 CSKAFNQRVVLREHIRAHHSGPE-SKGATTFECK--VCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       120 C~~~f~~~~~l~~H~~~~h~~~~-~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h  171 (295)
                      |++.|.+...|..|+...|.+.. ......|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            55555555555555543222111 1111245554  3555555555555555543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.69  E-value=2.4e-05  Score=40.79  Aligned_cols=25  Identities=24%  Similarity=0.569  Sum_probs=18.4

Q ss_pred             ceecC--cCccccCCHHHHHHHHhhcc
Q psy17050        148 TFECK--VCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       148 ~~~C~--~C~~~f~~~~~L~~H~~~h~  172 (295)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            57777  77777777777777777764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.66  E-value=0.00012  Score=46.73  Aligned_cols=52  Identities=23%  Similarity=0.476  Sum_probs=44.1

Q ss_pred             ccccc--chhccCChHhHHHHHH-HhCCCC------cccCc--chhhhcCCHHHHHHHHHHhc
Q psy17050         87 YSCRY--CYKAFADGGTLRKHER-VHTGEK------PYVCP--ICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus        87 ~~C~~--C~~~f~~~~~L~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |.|..  |++.|.+...|..|+. .|.+.+      .|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45666  9999999999999985 677655      79997  59999999999999999865

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.58  E-value=3.3e-05  Score=40.22  Aligned_cols=18  Identities=39%  Similarity=0.719  Sum_probs=7.4

Q ss_pred             cchhhccCHHHHHHHHHh
Q psy17050         30 DCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        30 ~C~~~f~~~~~l~~H~~~   47 (295)
                      .|++.|.....|..|++.
T Consensus         9 ~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             TTCEEESSHHHHHHHHGG
T ss_pred             cCcCccCCHHHHHHHHHH
Confidence            444444444444444433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.76  E-value=0.0018  Score=49.95  Aligned_cols=135  Identities=13%  Similarity=0.158  Sum_probs=74.7

Q ss_pred             CCceecccchhhccCH-----------HHHHHHHHhcccccCCCCccccccccccccCChHHHH-HHHHHhcCCCCccc-
Q psy17050         23 PASHMCEDCGEEYWDR-----------QSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQ-IHQRIHTGERPYSC-   89 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~-----------~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C-   89 (295)
                      +..|.|++|...|...           .-+...+...         ...|+.|...+.....+. .-+..........| 
T Consensus        16 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~---------~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~   86 (170)
T 3hcs_A           16 ESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDA---------GHKCPVDNEILLENQLFPDNFAKREILSLMVKCP   86 (170)
T ss_dssp             CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHH---------CSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECC
T ss_pred             CCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhC---------CCCCCCCccCcchhhhhhhHHHHHHHhhcccCCC
Confidence            4578899888777543           1222222211         126888877665421100 00111112234566 


Q ss_pred             -ccchhccCChHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHH
Q psy17050         90 -RYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHL  168 (295)
Q Consensus        90 -~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  168 (295)
                       .-|+..+. ...|..|+.. -.-.+..|+.|+..+ .+..|..|+...-      ..+...|+.|+..+. ...|..|.
T Consensus        87 n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C------~~r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A           87 NEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDC------PRRQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             STTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTC------TTCEEECTTTCCEEE-GGGHHHHH
T ss_pred             CCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhC------CCCCeECCCCCCccC-HHHHHhHH
Confidence             34666554 4567777642 234567788888776 4556777876544      566777888887774 44567787


Q ss_pred             hhccCCCC
Q psy17050        169 VQHSDENT  176 (295)
Q Consensus       169 ~~h~~~~~  176 (295)
                      ..+.+..+
T Consensus       157 ~~~~~~~~  164 (170)
T 3hcs_A          157 QNCPLALE  164 (170)
T ss_dssp             TTCCC---
T ss_pred             HhCcChhh
Confidence            77766543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.58  E-value=0.00039  Score=50.93  Aligned_cols=25  Identities=24%  Similarity=0.358  Sum_probs=14.7

Q ss_pred             CCcceecCcCccccCCHHHHHHHHh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      +...|.|.+|++.|.+...|..|+.
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            4445556666666666666666653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.55  E-value=0.0019  Score=47.20  Aligned_cols=77  Identities=17%  Similarity=0.287  Sum_probs=48.6

Q ss_pred             CCceecccchhhccCHHHHHHHH--HhcccccCCCCcccccccc------ccccCChHHHHHHHHHhcCCCCcccccchh
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHK--ARHDVIRTERGRIFPCHDC------GKTFNSRSSQQIHQRIHTGERPYSCRYCYK   94 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   94 (295)
                      .+++.|.+|+..|.+...+..|.  +.|..    ..+.|.+..+      +..|....    +...+.+...|.|.+|+.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~----~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~  101 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHAN----KVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNM  101 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHH----HHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHH----HHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCC
Confidence            35789999999999999999998  44421    0012222100      11222111    122344566788999999


Q ss_pred             ccCChHhHHHHHH
Q psy17050         95 AFADGGTLRKHER  107 (295)
Q Consensus        95 ~f~~~~~L~~H~~  107 (295)
                      .|.+...|..|+.
T Consensus       102 ~f~s~~~~~~H~~  114 (127)
T 1zu1_A          102 TFSSPVVAESHYI  114 (127)
T ss_dssp             ECSSHHHHHHHHT
T ss_pred             EeCCHHHHHHHHC
Confidence            9999999988875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.11  E-value=0.009  Score=34.53  Aligned_cols=25  Identities=20%  Similarity=0.319  Sum_probs=16.0

Q ss_pred             CccccccccccccCChHHHHHHHHH
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRI   80 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~   80 (295)
                      +..|.|+.|+..|.....|+.||+.
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CCceeCCcccccccchHHHHhhhhh
Confidence            3556666666666666666666653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.61  E-value=0.0085  Score=46.11  Aligned_cols=101  Identities=16%  Similarity=0.198  Sum_probs=72.1

Q ss_pred             eecccchhhccCHH-----HHHHHHHhcccccCCCCccccc--cccccccCChHHHHHHHHHhcCCCCcccccchhccCC
Q psy17050         26 HMCEDCGEEYWDRQ-----SLLVHKARHDVIRTERGRIFPC--HDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFAD   98 (295)
Q Consensus        26 ~~C~~C~~~f~~~~-----~l~~H~~~h~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   98 (295)
                      ..|+.|...+....     .+..-+.         .....|  ..|+..+. ...|..|.. .-...+..|+.|+..+ .
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i~---------~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~  121 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREIL---------SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-Q  121 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHHH---------TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-E
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHHh---------hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-H
Confidence            38999988775431     2222222         234567  46887765 567888973 3445678899999988 6


Q ss_pred             hHhHHHHHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050         99 GGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus        99 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      +..|..|+...-..+...|+.|+..+.. ..|..|...+.+
T Consensus       122 r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~  161 (170)
T 3hcs_A          122 KFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPL  161 (170)
T ss_dssp             GGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC
T ss_pred             HHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcC
Confidence            7789999987778888999999987765 567899887753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.54  E-value=0.0019  Score=46.50  Aligned_cols=26  Identities=23%  Similarity=0.455  Sum_probs=18.0

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      +.++|.|..|++.|.+...|..|+++
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhh
Confidence            56667777777777777777777654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.42  E-value=0.003  Score=45.50  Aligned_cols=33  Identities=21%  Similarity=0.404  Sum_probs=27.0

Q ss_pred             HHHhCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        106 ERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      -..|+|+++|.|..|++.|.+...|..|+++..
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            345778888999999999999999999987753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.89  E-value=0.017  Score=31.18  Aligned_cols=26  Identities=15%  Similarity=0.349  Sum_probs=19.6

Q ss_pred             CceecccchhhccCHHHHHHHHHhcc
Q psy17050         24 ASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ..|.|++|.+.|.+...|..|....|
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            35788888888888888888876655

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.79  E-value=0.051  Score=31.42  Aligned_cols=27  Identities=15%  Similarity=0.258  Sum_probs=20.3

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ..|.|+.|+..|.....|+.||+-.-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            567788888888888888888775433

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.22  E-value=0.039  Score=29.78  Aligned_cols=26  Identities=35%  Similarity=0.489  Sum_probs=19.6

Q ss_pred             ceecCcCccccCCHHHHHHHHhhccC
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      .|.|++|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            47888888888888888888766543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.06  E-value=0.16  Score=27.49  Aligned_cols=26  Identities=19%  Similarity=0.368  Sum_probs=17.5

Q ss_pred             CCCceecccchhhccCHHHHHHHHHh
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      ....+.|..|+..|.....+..|.+.
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhee
Confidence            34566777777777777777777553

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.36  E-value=0.1  Score=33.98  Aligned_cols=40  Identities=25%  Similarity=0.471  Sum_probs=21.2

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccC
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFA   97 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   97 (295)
                      -.|.|..||..++ +..|..|.....+-..|.|-.|++.|.
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            3455666665554 344555554444434455655666655

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.04  E-value=0.41  Score=31.83  Aligned_cols=36  Identities=28%  Similarity=0.489  Sum_probs=25.2

Q ss_pred             CCCCCCCCCCCCceecccchhhccCHHHHHHHHHhcccc
Q psy17050         13 PAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVI   51 (295)
Q Consensus        13 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (295)
                      |+.+..-.-.++...|-+||+.|.   .|..|+..+|+.
T Consensus         9 pav~~kksi~~d~iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A            9 PAVSVRKSVQDDHIVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             CCCCSSTTBCSSCEECTBTCCEES---BHHHHHHHTTCS
T ss_pred             CCCChhhccCCCceEecccchhhH---HHHHHHHHccCC
Confidence            344444444566788999999997   477999987643

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=88.84  E-value=0.24  Score=31.69  Aligned_cols=49  Identities=24%  Similarity=0.526  Sum_probs=20.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCcccccccccc
Q psy17050          2 AFHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGK   66 (295)
Q Consensus         2 ~~~~p~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~   66 (295)
                      |||-|.......+......+..-.|.|..||..|...                ......|+.||.
T Consensus         5 ~~q~p~~~~~~~~~g~~~~~~~v~Y~C~~CG~~~e~~----------------~~d~irCp~CG~   53 (70)
T 1twf_L            5 GFQIPTNLDAAAAGTSQARTATLKYICAECSSKLSLS----------------RTDAVRCKDCGH   53 (70)
T ss_dssp             --------------------CCCCEECSSSCCEECCC----------------TTSTTCCSSSCC
T ss_pred             cccCCCCcCccccccccCCCceEEEECCCCCCcceeC----------------CCCCccCCCCCc
Confidence            5666763222111111122245679999999998542                112346999987

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.24  E-value=0.27  Score=25.66  Aligned_cols=23  Identities=35%  Similarity=0.687  Sum_probs=16.9

Q ss_pred             cCcchhhhcCCHHHHHHHHHHhc
Q psy17050        116 VCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      .|.+|.+.|....+|..|++.-|
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            47777777777777777777665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.67  E-value=0.63  Score=25.16  Aligned_cols=26  Identities=12%  Similarity=0.142  Sum_probs=21.6

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      ....+.|..|+..|.+...+..|++-
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhee
Confidence            55678899999999999999999754

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=86.86  E-value=0.26  Score=27.50  Aligned_cols=28  Identities=25%  Similarity=0.276  Sum_probs=17.9

Q ss_pred             CCCCCceecccchhhccCHHHHHHHHHhc
Q psy17050         20 PASPASHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++....|.|+.|++.|.. ..+..|.-.|
T Consensus         4 ~~~~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            4 MAAEDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             --CCCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCcCCCcccccccCcCCc-ccccchhhHH
Confidence            344567788888887765 4567776655

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.77  E-value=0.47  Score=30.74  Aligned_cols=12  Identities=42%  Similarity=0.991  Sum_probs=7.3

Q ss_pred             ceecCcCccccC
Q psy17050        148 TFECKVCGCMLS  159 (295)
Q Consensus       148 ~~~C~~C~~~f~  159 (295)
                      .|+|+.||..|-
T Consensus        51 ~FkCP~CgEEFy   62 (95)
T 2k5c_A           51 VFKCPVCGEEFY   62 (95)
T ss_dssp             EEECTTTCCEEE
T ss_pred             hhcCCCccHHHh
Confidence            366666666663

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.63  E-value=0.53  Score=24.53  Aligned_cols=25  Identities=24%  Similarity=0.482  Sum_probs=21.8

Q ss_pred             eecCcCccccCCHHHHHHHHhhccC
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      .-|.+|.+.|+.-..|..|++.-|+
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4699999999999999999987554

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=85.17  E-value=0.47  Score=28.21  Aligned_cols=20  Identities=35%  Similarity=0.527  Sum_probs=12.2

Q ss_pred             ecccchhhccCHHHHHHHHH
Q psy17050         27 MCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        27 ~C~~C~~~f~~~~~l~~H~~   46 (295)
                      .|.+|+..|..+..|+.|+.
T Consensus        15 eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           15 ECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             CCTTTTCCCCSSSCHHHHHT
T ss_pred             cccccCcccccccchhhhhc
Confidence            56666666666666666543

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=85.08  E-value=1.5  Score=28.06  Aligned_cols=49  Identities=22%  Similarity=0.424  Sum_probs=35.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCCh
Q psy17050          3 FHKPTASAARPAASKGPPASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSR   71 (295)
Q Consensus         3 ~~~p~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~   71 (295)
                      .+-|+.....+++....+...+..+|..|++..                   +--.|.| .|+..|-..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~k~~~~RC~~C~kkv-------------------gL~~f~C-rCg~~FCs~   51 (74)
T 1wfp_A            3 SGSSGTRGGDSAAAPLDPPKSTATRCLSCNKKV-------------------GVTGFKC-RCGSTFCGT   51 (74)
T ss_dssp             CCCCCCCSSCCCCCCSCCTTCCCCBCSSSCCBC-------------------TTTCEEC-TTSCEECTT
T ss_pred             CCCCCCCCCcccccccccCcccCccchhhcCcc-------------------cccceEe-ccCCEeccc
Confidence            345666666666666677777788999998763                   3346899 699999865

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=83.84  E-value=0.82  Score=23.36  Aligned_cols=22  Identities=23%  Similarity=0.422  Sum_probs=17.6

Q ss_pred             ceecccchhhccCHHHHHHHHH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      .|.|++|.....+...|..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            5788888888888888888865

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.14  E-value=0.41  Score=31.10  Aligned_cols=46  Identities=26%  Similarity=0.554  Sum_probs=36.5

Q ss_pred             ceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccccCChHHHHHH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKTFNSRSSQQIH   77 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   77 (295)
                      .|.|..||.++ .+..+..|...-.     +...|.|-.|+..|.. ..++.|
T Consensus        10 ~F~C~~Cgd~l-KK~kv~~H~~~Cr-----~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESV-KKIQVEKHVSNCR-----NCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEE-ETTHHHHHHHHCT-----TCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCee-ecccchhHHhhCC-----CCCcEEecccCCeeCC-CCEeCE
Confidence            58999999988 5578999987662     4458999999999984 556666

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.08  E-value=0.045  Score=35.74  Aligned_cols=23  Identities=22%  Similarity=0.478  Sum_probs=8.8

Q ss_pred             HHHHHHHhcCCCCcccccchhcc
Q psy17050         74 QQIHQRIHTGERPYSCRYCYKAF   96 (295)
Q Consensus        74 l~~H~~~h~~~~~~~C~~C~~~f   96 (295)
                      |..|+...-..+...|.+|+..|
T Consensus        32 l~~H~~~~C~~r~v~C~~C~~~~   54 (76)
T 2yuc_A           32 LPAHLQHDCPKRRLKCEFCGCDF   54 (76)
T ss_dssp             STTTTTTSCTTSCCCCSSSCCCC
T ss_pred             HHhhCHhhCCCcceECCCCCCcc
Confidence            34443322233333444444433

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.08  E-value=0.66  Score=30.85  Aligned_cols=29  Identities=28%  Similarity=0.479  Sum_probs=22.2

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccCCCC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSDENT  176 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  176 (295)
                      .+....|-+||+.|..   |.+|+.+||+..+
T Consensus        18 ~~d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           18 QDDHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CSSCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CCCceEecccchhhHH---HHHHHHHccCCCH
Confidence            3445789999999984   7799999877644

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=81.42  E-value=1.8  Score=25.65  Aligned_cols=45  Identities=20%  Similarity=0.430  Sum_probs=22.7

Q ss_pred             cCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCcccc-CCHHHHHHHHh
Q psy17050        116 VCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCML-SSSPELCQHLV  169 (295)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f-~~~~~L~~H~~  169 (295)
                      .|.+|.....+...|..|......         -+|+.|-... .+.+.|..|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~---------gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCIN---------GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTT---------TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCC---------CCCCcccCcCCcCHHHHHHHHH
Confidence            455555555555555566555531         1355553332 34555555554

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.03  E-value=2.8  Score=29.85  Aligned_cols=29  Identities=10%  Similarity=0.156  Sum_probs=20.7

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ..+.+..|-.|.+.|.+...+..|++..|
T Consensus        11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H   39 (121)
T 1wir_A           11 HGRQHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CCCCceeEecCCCcccCHHHHHHHHHHhc
Confidence            34456777777777777777777777665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	295
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-12
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-11
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-08
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-10
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-08
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	9e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	9e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	6e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.003
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	8e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (137), Expect = 8e-12
 Identities = 19/33 (57%), Positives = 24/33 (72%)

Query: 80  IHTGERPYSCRYCYKAFADGGTLRKHERVHTGE 112
           IH+GE+PY C  C KAF+    L +H+RVHTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (116), Expect = 7e-09
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 108 VHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           +H+GEKPY C  C KAF++  +L +H R H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 6e-07
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGE 84
          + C +CGK F+  S    HQR+HTGE
Sbjct: 8  YGCVECGKAFSRSSILVQHQRVHTGE 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (135), Expect = 1e-11
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTGE 112
            +      R Y C  C K+F+    L KH R HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 7e-08
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 104 KHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           + E      + Y C  C K+F+    L +H R H
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 1e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 46 ARHDVIRTERGRIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
           R +  + ER R + C +CGK+F+  S    H+R HTGE
Sbjct: 1  GRSEWQQRER-RRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (131), Expect = 6e-11
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           R HTGE+PY+C +C K F     L  H + +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (123), Expect = 8e-10
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAHH 138
           R HTGEKPY C  C K F Q+ +L  H + +H
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 3e-05
 Identities = 6/26 (23%), Positives = 11/26 (42%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGE 84
          + C  C KTF  +    +H + +   
Sbjct: 9  YACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (128), Expect = 2e-10
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 77  HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTG 111
             R  TG +P+ C  C ++F+    L  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
             R  TG KP+ CP C ++F++   L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (127), Expect = 2e-10
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 107 RVHTGEKPYVCPICSKAFNQRVVLREHIRAHHSG 140
           R H+GEKPY C IC   F Q   ++ HI   H+ 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (121), Expect = 1e-09
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 79  RIHTGERPYSCRYCYKAFADGGTLRKHE-RVHTGE 112
           R H+GE+PY C  C+  F   GT++ H  + HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 6/27 (22%), Positives = 12/27 (44%), Gaps = 1/27 (3%)

Query: 59 FPCHDCGKTFNSRSSQQIH-QRIHTGE 84
          + C+ C   F    + ++H  + HT  
Sbjct: 9  YECYICHARFTQSGTMKMHILQKHTEN 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (126), Expect = 3e-10
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 60 PCHDCGKTFNSRSSQQIHQRIHTGERPYSCRY 91
          P   CGK+FN +   + H ++H+  R Y C +
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 87  YSCRY--CYKAFADGGTLRKHERVHTGEKPYVC 117
           +SC    C K+F     L++H ++H+  + Y+C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (125), Expect = 4e-10
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 82  TGERPYSCRYCYKAFADGGTLRKHER-VHTGEKPYVCPI 119
           +  +PY C+ C K F+    L  H + VHT E+P+ C +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 56 GRIFPCHDCGKTFNSRSSQQIH-QRIHTGERPYSC 89
          G+ + C  CGK F+       H +++HT ERP+ C
Sbjct: 3  GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 110 TGEKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKV 153
           +  KPY+C  C K F++   L  HI+  H+          +C+V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-----HKCQV 39

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 8e-09
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTGEKPYVCPICSKAFNQRVVLREHIRAH 137
           ++ Y C+ C K+F       +H  +H G +PY C +C K F  +  L  H++ H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 59  FPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVH 109
           +PC  CGK+F  +S +  H  +H G RPY C  C K F     L  H ++H
Sbjct: 4   YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 7/60 (11%)

Query: 112 EKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQH 171
           +K Y C  C K+F  +     H+  H             C VCG        L  H+  H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG------CGVCGKKFKMKHHLVGHMKIH 53

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.9 bits (111), Expect = 3e-08
 Identities = 6/39 (15%), Positives = 14/39 (35%), Gaps = 2/39 (5%)

Query: 77  HQRIHTGERPYSCRYCY--KAFADGGTLRKHERVHTGEK 113
                  ++ + C +    K F     +R H + H  ++
Sbjct: 9   KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 54 ERGRIFPCHDCGKTFNSRSSQQIHQRIHTGER 85
          ++        C KTF  R + + H + H  +R
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 100 GTLRKHERVHTGEKPYVCPIC--SKAFNQRVVLREHIRAH 137
           G++ K+      +K + C     +K F +R  +R HI+ H
Sbjct: 5   GSIDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (109), Expect = 5e-08
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 81  HTGERPYSCRYCYKAFADGGTLRKHERVHTGE 112
            +G+RP+ CR C  AF       +H +VHT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (104), Expect = 3e-07
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 109 HTGEKPYVCPICSKAFNQRVVLREHIRAH 137
            +G++P+VC IC  AF  +     H++ H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 7e-04
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 57 RIFPCHDCGKTFNSRSSQQIHQRIHTGE 84
          R F C  C   F ++++   H ++HT  
Sbjct: 6  RPFVCRICLSAFTTKANCARHLKVHTDT 33

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           R + C  C +AFA    L++H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGER 85
          F C  C + F  +   + H R HT E+
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 9/25 (36%), Positives = 18/25 (72%)

Query: 113 KPYVCPICSKAFNQRVVLREHIRAH 137
           + +VC +C++AF ++  L+ H R+H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 9e-07
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTGER 85
          F C +C K F        H + H  ++
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHTGEK 113
           + ++C  C K F     L KH + H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 5e-04
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 113 KPYVCPICSKAFNQRVVLREHIRAH 137
           K + CP C K F +   L +HI+ H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 9e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 84  ERPYSCRYCYKAFADGGTLRKHERVHTG 111
           ++P+ CR C + F+    L  H R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHTG 83
          F C  C + F+       H R HTG
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (93), Expect = 9e-06
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 112 EKPYVCPICSKAFNQRVVLREHIRAH 137
           +KP+ C IC + F++   L  HIR H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 6e-06
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTGEK 113
           RP+ C +  C K F     L++H+R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 7e-06
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 59 FPCH--DCGKTFNSRSSQQIHQRIHTGER 85
          F C    CGK F      Q H+R HTGE+
Sbjct: 3  FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 7e-06
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 63 DCGKTFNSRSSQQIHQRIHTGE 84
           C K+++   + + H R HTGE
Sbjct: 9  GCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTGE 112
           +P+ C +  C K+++    L+ H R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 113 KPYVC--PICSKAFNQRVVLREHIRAH 137
           KP+ C    C K++++   L+ H+R+H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (93), Expect = 8e-06
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 59 FPCHDCGKTFNSRSSQQIHQRIHT 82
          + C +CGK F+  S    HQRIHT
Sbjct: 3  YKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 85  RPYSCRYCYKAFADGGTLRKHERVHT 110
           +PY C  C KAF+    L  H+R+HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 113 KPYVCPICSKAFNQRVVLREHIRAH 137
           KPY C  C KAF+Q   L  H R H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 59 FPCH--DCGKTFNSRSSQQIHQRIHTG 83
          + C    C + F+  +    H RIHTG
Sbjct: 3  YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTG 111
           RPY+C    C + F+    L +H R+HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 6e-05
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 59 FPCH--DCGKTFNSRSSQQIHQRIHTGE 84
          F C    CGK F+   + + H RIHTG+
Sbjct: 3  FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 85  RPYSCRY--CYKAFADGGTLRKHERVHTGE 112
           +P+ C +  C K F+    LR H R+HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 84  ERPYSCRY--CYKAFADGGTLRKHERVHTGE 112
           +RPYSC +  C KAF     L +H++ H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 57 RIFPCH--DCGKTFNSRSSQQIHQRIHTGE 84
          R + C    C K F        H++ H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 112 EKPYVC--PICSKAFNQRVVLREHIRAH 137
           ++PY C  P C KAF +   L  H ++H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	295
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.58
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.05
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.94
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.88
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.86
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.86
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.83
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.82
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.82
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.75
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.67
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.62
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.56
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.56
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.46
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.46
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.37
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.3
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.23
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.21
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.11
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.84
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.68
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.63
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.6
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.57
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.5
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.49
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.47
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.39
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.39
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.32
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.21
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.17
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.14
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.1
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.07
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.04
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.87
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.81
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.78
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.78
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.63
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.55
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.39
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.36
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.31
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.93
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.77
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.75
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.71
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.69
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.47
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.43
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.41
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.4
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.31
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.13
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.11
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.78
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.63
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.01
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.78
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.74
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.72
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.52
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.66
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.32
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.96
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.69
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.65
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.43
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.38
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.85
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.66
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.14
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.77
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.37
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.84
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.6
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.42
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.92
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.22
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	84.69
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.87
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.55
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	82.11
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	80.49

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.3e-16  Score=95.32  Aligned_cols=52  Identities=38%  Similarity=0.894  Sum_probs=26.9

Q ss_pred             ccccccccccccCChHHHHHHHHHhcCCCCcccccchhccCChHhHHHHHHHh
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  109 (295)
                      ++|+|. ||+.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            445552 5555555555555555555555555555555555555555555443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.2e-16  Score=95.35  Aligned_cols=53  Identities=30%  Similarity=0.674  Sum_probs=30.3

Q ss_pred             CCcccCcchhhhcCCHHHHHHHHHHhcCCCCCCCCcceecCcCccccCCHHHHHHHHhhc
Q psy17050        112 EKPYVCPICSKAFNQRVVLREHIRAHHSGPESKGATTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      |++|.|. ||+.|.....|..|+++|.      ++++|.|..|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht------~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL------GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS------CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc------cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3555553 5555555555555555553      555556656666666555565555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.2e-11  Score=68.97  Aligned_cols=34  Identities=35%  Similarity=0.816  Sum_probs=17.4

Q ss_pred             ccccccccccccCChHHHHHHHH-HhcCCCCcccc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQR-IHTGERPYSCR   90 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~   90 (295)
                      ++|.|.+||+.|....+|..|++ +|++++||+|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            45555555555555555555543 35555555553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2e-11  Score=68.13  Aligned_cols=35  Identities=40%  Similarity=0.824  Sum_probs=23.4

Q ss_pred             CCCcccccchhccCChHhHHHHHH-HhCCCCcccCc
Q psy17050         84 ERPYSCRYCYKAFADGGTLRKHER-VHTGEKPYVCP  118 (295)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~  118 (295)
                      ++||+|.+||+.|.....|.+|++ +|++++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            566677777777777777777754 46666676665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=9.3e-12  Score=69.60  Aligned_cols=35  Identities=37%  Similarity=0.696  Sum_probs=16.6

Q ss_pred             HHHHhcCCCCcccccchhccCChHhHHHHHHHhCC
Q psy17050         77 HQRIHTGERPYSCRYCYKAFADGGTLRKHERVHTG  111 (295)
Q Consensus        77 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  111 (295)
                      |+++|++++||.|..|++.|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            34444444444444444444444444444444444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=7.9e-11  Score=62.99  Aligned_cols=29  Identities=52%  Similarity=0.987  Sum_probs=11.5

Q ss_pred             cCCCCcccccchhccCChHhHHHHHHHhC
Q psy17050         82 TGERPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      ++++||.|..|++.|...+.|..|+++|+
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            33333444444444433333444433333

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.3e-10  Score=63.87  Aligned_cols=30  Identities=40%  Similarity=0.733  Sum_probs=12.2

Q ss_pred             hcCCCCcccccchhccCChHhHHHHHHHhC
Q psy17050         81 HTGERPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        81 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      |++++||+|.+|+++|...+.|..|+++|+
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            334444444444444444444444444333

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=8.8e-11  Score=65.05  Aligned_cols=31  Identities=32%  Similarity=0.696  Sum_probs=13.1

Q ss_pred             HHhcCCCCcccccchhccCChHhHHHHHHHh
Q psy17050         79 RIHTGERPYSCRYCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        79 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  109 (295)
                      ++|++++||+|.+|++.|...+.|..|+++|
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            3344444444444444444444444444433

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.1e-10  Score=64.62  Aligned_cols=33  Identities=36%  Similarity=0.701  Sum_probs=19.0

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHh
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      |.+.|++++||+|.+|++.|.....|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            345555555555555555555555555555554

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=7.3e-11  Score=65.85  Aligned_cols=34  Identities=29%  Similarity=0.566  Sum_probs=17.0

Q ss_pred             HHHHhCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        105 HERVHTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |+++|++++||+|..||+.|...+.|..|+++|.
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            4444555555555555555555555555555443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.88  E-value=5.5e-10  Score=57.90  Aligned_cols=27  Identities=33%  Similarity=0.634  Sum_probs=13.7

Q ss_pred             cccccccccccCChHHHHHHHHHhcCC
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      ||.|++|++.|...+.|.+|+++|+++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            445555555555555555555555444

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=5e-10  Score=60.65  Aligned_cols=26  Identities=27%  Similarity=0.606  Sum_probs=10.4

Q ss_pred             CccccccccccccCChHHHHHHHHHh
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      ++||+|.+|++.|..+..|+.|+++|
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CccccCCCCCCcccChHHHHHHcccc
Confidence            33444444444444444444444333

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=5.8e-10  Score=57.08  Aligned_cols=28  Identities=29%  Similarity=0.636  Sum_probs=17.9

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++||.|.+|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566666666666666666666666643

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5e-10  Score=61.37  Aligned_cols=30  Identities=47%  Similarity=0.905  Sum_probs=13.2

Q ss_pred             hCCCCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        109 HTGEKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      |+|++||+|++|++.|.....|..|++.+|
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            444444444444444444444444444333

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=7.1e-10  Score=60.84  Aligned_cols=29  Identities=21%  Similarity=0.446  Sum_probs=16.4

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +++||.|.+|++.|...+.|..|+++|++
T Consensus         5 gekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           5 GEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            55555555555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.5e-10  Score=61.56  Aligned_cols=31  Identities=35%  Similarity=0.803  Sum_probs=20.2

Q ss_pred             HhcCCCCcccccchhccCChHhHHHHHHHhC
Q psy17050         80 IHTGERPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        80 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      +|++++||+|.+|++.|....+|..|++.++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            4666666666666666666666666665444

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.83  E-value=1e-09  Score=56.82  Aligned_cols=28  Identities=29%  Similarity=0.634  Sum_probs=20.0

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +||.|++|++.|...+.|.+|+++|.++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4677777777777777777777777665

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=8.7e-10  Score=60.20  Aligned_cols=32  Identities=38%  Similarity=0.947  Sum_probs=20.6

Q ss_pred             ccccc--cccccCChHHHHHHHHHhcCCCCcccc
Q psy17050         59 FPCHD--CGKTFNSRSSQQIHQRIHTGERPYSCR   90 (295)
Q Consensus        59 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~   90 (295)
                      |.|++  |++.|.....|++|+++|++++||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45554  666666666666666666666666664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.2e-09  Score=58.30  Aligned_cols=29  Identities=34%  Similarity=0.606  Sum_probs=19.0

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +++||.|..|++.|...+.|..|+++|.+
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            56666666666666666666666666655

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=8.9e-10  Score=56.36  Aligned_cols=26  Identities=31%  Similarity=0.625  Sum_probs=11.6

Q ss_pred             ccccccccccccCChHHHHHHHHHhc
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      +||+|.+|++.|...+.|..|+++|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            34444444444444444444444443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.1e-09  Score=56.59  Aligned_cols=27  Identities=26%  Similarity=0.571  Sum_probs=14.4

Q ss_pred             cccccccccccCChHHHHHHHHHhcCC
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      +|.|.+|++.|...+.|..|+++|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=1.5e-09  Score=58.68  Aligned_cols=31  Identities=26%  Similarity=0.654  Sum_probs=23.7

Q ss_pred             CCCcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        144 KGATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       144 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++++||.|.+|++.|.+...|.+|+++|.+.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            4778888888888888888888888777653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.9e-09  Score=55.75  Aligned_cols=28  Identities=25%  Similarity=0.551  Sum_probs=21.3

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      ++|.|.+|++.|...+.|.+|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4677777777777777777777777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.5e-09  Score=59.27  Aligned_cols=32  Identities=31%  Similarity=0.776  Sum_probs=20.4

Q ss_pred             ccccc--chhccCChHhHHHHHHHhCCCCcccCc
Q psy17050         87 YSCRY--CYKAFADGGTLRKHERVHTGEKPYVCP  118 (295)
Q Consensus        87 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~  118 (295)
                      |.|++  |++.|.....|++|+++|++++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45655  666666666666666666666666664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=3.1e-10  Score=66.21  Aligned_cols=38  Identities=18%  Similarity=0.470  Sum_probs=21.0

Q ss_pred             HHHHHHHhcCCCCccccc--chhccCChHhHHHHHHHhCCC
Q psy17050         74 QQIHQRIHTGERPYSCRY--CYKAFADGGTLRKHERVHTGE  112 (295)
Q Consensus        74 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  112 (295)
                      |..|+. |.+++||.|.+  |++.|...+.|..|+++|+|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            334443 55555555554  555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.9e-09  Score=52.16  Aligned_cols=25  Identities=28%  Similarity=0.582  Sum_probs=17.7

Q ss_pred             cceecCcCccccCCHHHHHHHHhhc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      +||+|..||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4677777777777777777777766

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7.8e-09  Score=51.40  Aligned_cols=23  Identities=22%  Similarity=0.583  Sum_probs=9.4

Q ss_pred             ceecccchhhccCHHHHHHHHHh
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      ||+|.+||+.|.....|..|++.
T Consensus         2 Py~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccC
Confidence            34444444444444444444433

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.1e-08  Score=52.00  Aligned_cols=28  Identities=29%  Similarity=0.479  Sum_probs=19.2

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +||.|++  |++.|...+.|..|+++|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4667766  777777777777777777653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.2e-08  Score=51.95  Aligned_cols=26  Identities=31%  Similarity=0.577  Sum_probs=12.4

Q ss_pred             cccccc--cccccCChHHHHHHHHHhcC
Q psy17050         58 IFPCHD--CGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        58 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ||.|.+  |++.|...+.|+.|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444444  44444444444444444444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2e-08  Score=52.19  Aligned_cols=28  Identities=29%  Similarity=0.595  Sum_probs=18.8

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +||.|++  |++.|...+.|..|+++|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4667766  777777777777777776653

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.1e-08  Score=52.12  Aligned_cols=26  Identities=46%  Similarity=0.810  Sum_probs=13.6

Q ss_pred             cccccc--cccccCChHHHHHHHHHhcC
Q psy17050         58 IFPCHD--CGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        58 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   83 (295)
                      ||.|++  |++.|...+.|+.|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.6e-08  Score=51.24  Aligned_cols=21  Identities=52%  Similarity=0.918  Sum_probs=10.4

Q ss_pred             cccccCChHHHHHHHHHhcCC
Q psy17050         64 CGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        64 C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      |++.|...++|..|+++|+++
T Consensus        10 C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCcCChhHhhhhcCccccc
Confidence            555555555555555554444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.46  E-value=3.3e-09  Score=61.71  Aligned_cols=30  Identities=33%  Similarity=0.767  Sum_probs=15.6

Q ss_pred             hCCCCcccCcc--hhhhcCCHHHHHHHHHHhc
Q psy17050        109 HTGEKPYVCPI--CSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       109 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  138 (295)
                      |.+++||+|.+  |++.|...+.|..|+++|.
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            45555555544  5555555555555555553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.8e-08  Score=50.57  Aligned_cols=28  Identities=36%  Similarity=0.621  Sum_probs=20.3

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +||.|++  |++.|...+.|..|+++|.++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            4677754  777777777777777777765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=1.3e-07  Score=49.76  Aligned_cols=28  Identities=18%  Similarity=0.501  Sum_probs=21.3

Q ss_pred             CcceecCc--CccccCCHHHHHHHHhhccC
Q psy17050        146 ATTFECKV--CGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       146 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++||.|.+  |++.|...+.|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777877  88888888888888877764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=1.2e-07  Score=48.58  Aligned_cols=26  Identities=31%  Similarity=0.687  Sum_probs=17.1

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhcc
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  172 (295)
                      +||.|.+  |++.|.+.+.|.+|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            4566666  6666666666666666664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=4.4e-07  Score=44.18  Aligned_cols=27  Identities=30%  Similarity=0.572  Sum_probs=23.6

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhcc
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999988874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.2e-07  Score=47.57  Aligned_cols=18  Identities=33%  Similarity=0.704  Sum_probs=7.5

Q ss_pred             cccccCChHHHHHHHHHh
Q psy17050         64 CGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        64 C~~~f~~~~~l~~H~~~h   81 (295)
                      |++.|...++|..|+++|
T Consensus        10 C~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1          10 CDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CCCEESSHHHHHHHTHHH
T ss_pred             CCcEECchhHhhhhcCcc
Confidence            444444444444444443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.21  E-value=4.3e-07  Score=47.67  Aligned_cols=18  Identities=28%  Similarity=0.540  Sum_probs=7.3

Q ss_pred             cccccCChHHHHHHHHHh
Q psy17050         64 CGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        64 C~~~f~~~~~l~~H~~~h   81 (295)
                      |++.|....+|.+|+++|
T Consensus        11 C~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_          11 CDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCCCBSSSHHHHHHHGGG
T ss_pred             CCCeeCCHHHHHHHhhhc
Confidence            444444444444444333

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.9e-07  Score=47.28  Aligned_cols=25  Identities=24%  Similarity=0.618  Sum_probs=17.3

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhc
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h  171 (295)
                      +||.|++  |++.|...+.|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            4667766  777777777777777666

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=8.2e-07  Score=41.71  Aligned_cols=25  Identities=32%  Similarity=0.659  Sum_probs=17.4

Q ss_pred             eecCcCccccCCHHHHHHHHhhccC
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      .+|++|++.|+.+..|..|++.|.+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4577777777777777777776653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=7.3e-07  Score=45.07  Aligned_cols=29  Identities=45%  Similarity=0.826  Sum_probs=14.2

Q ss_pred             cccccchhccCChHhHHHHHHHhCCCCcc
Q psy17050         87 YSCRYCYKAFADGGTLRKHERVHTGEKPY  115 (295)
Q Consensus        87 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  115 (295)
                      ..|.+||+.|.....|.+|...|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34444555555555555554445544444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=4.9e-07  Score=45.73  Aligned_cols=24  Identities=25%  Similarity=0.505  Sum_probs=10.7

Q ss_pred             cccccc--cccccCChHHHHHHHHHh
Q psy17050         58 IFPCHD--CGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        58 ~~~C~~--C~~~f~~~~~l~~H~~~h   81 (295)
                      ||.|.+  |++.|...++|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            344443  444444444444444444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.1e-06  Score=43.33  Aligned_cols=28  Identities=21%  Similarity=0.598  Sum_probs=20.3

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++||.|++|+..|+.+..+..|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3677777777777777777777777755

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.1e-06  Score=41.31  Aligned_cols=21  Identities=38%  Similarity=0.868  Sum_probs=8.9

Q ss_pred             ccccccccCChHHHHHHHHHh
Q psy17050         61 CHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        61 C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      |+.|++.|..+..|+.||+.|
T Consensus         4 c~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           4 CEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             BTTTTBCCCCHHHHHHHGGGC
T ss_pred             cchhhhHhcchhHHHHHhhcc
Confidence            444444444444444444443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=1.5e-06  Score=42.23  Aligned_cols=25  Identities=28%  Similarity=0.895  Sum_probs=11.4

Q ss_pred             CCcccccchhccCChHhHHHHHHHh
Q psy17050         85 RPYSCRYCYKAFADGGTLRKHERVH  109 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H~~~h  109 (295)
                      +||.|.+||+.|......++|.+.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            3444444444444444444444443

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.1e-06  Score=42.35  Aligned_cols=25  Identities=40%  Similarity=1.024  Sum_probs=10.8

Q ss_pred             CcccCcchhhhcCCHHHHHHHHHHh
Q psy17050        113 KPYVCPICSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~~  137 (295)
                      +||.|++|+..|..+..+..|.++|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEeeecc
Confidence            3444444444444444444444444

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.6e-06  Score=43.82  Aligned_cols=30  Identities=37%  Similarity=0.744  Sum_probs=21.1

Q ss_pred             cccccccccccCChHHHHHHHHHhcCCCCc
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIHTGERPY   87 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   87 (295)
                      ...|..||+.|.....|.+|...|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345777777777777777777777777766

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=4.2e-06  Score=40.27  Aligned_cols=26  Identities=38%  Similarity=0.713  Sum_probs=11.8

Q ss_pred             CCcccccchhccCChHhHHHHHHHhC
Q psy17050         85 RPYSCRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      +||+|.+|.+.-.+.+.|..|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            34444444444444444444444444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8e-06  Score=39.29  Aligned_cols=28  Identities=29%  Similarity=0.638  Sum_probs=19.6

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++||+|.+|...-.+.+.|..|++.|.+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3567777777777777777777777664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.7e-05  Score=39.04  Aligned_cols=25  Identities=20%  Similarity=0.480  Sum_probs=14.0

Q ss_pred             ceecCc--CccccCCHHHHHHHHhhcc
Q psy17050        148 TFECKV--CGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       148 ~~~C~~--C~~~f~~~~~L~~H~~~h~  172 (295)
                      ||.|.+  |++.|...++|+.|++.+|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455555  5555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2.6e-05  Score=37.70  Aligned_cols=26  Identities=27%  Similarity=0.592  Sum_probs=18.1

Q ss_pred             eecCcCccccCCHHHHHHHHhhccCC
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      |.|+.||..+...+.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.3e-05  Score=37.92  Aligned_cols=24  Identities=33%  Similarity=0.483  Sum_probs=10.0

Q ss_pred             ccccchhccCChHhHHHHHHHhCC
Q psy17050         88 SCRYCYKAFADGGTLRKHERVHTG  111 (295)
Q Consensus        88 ~C~~C~~~f~~~~~L~~H~~~h~~  111 (295)
                      .|+.|+......+-|++|++.|++
T Consensus         3 vC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           3 ICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             BCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             cccccCcccCCHHHHHHHHHHhcC
Confidence            344444444444444444444433

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2.7e-05  Score=37.19  Aligned_cols=25  Identities=28%  Similarity=0.558  Sum_probs=18.4

Q ss_pred             eecCcCccccCCHHHHHHHHhhccC
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ..|..||+.|.-.+.|++|...|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4677777777777777777777765

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.4e-05  Score=38.51  Aligned_cols=26  Identities=42%  Similarity=1.040  Sum_probs=16.6

Q ss_pred             CcccCcc--hhhhcCCHHHHHHHHHHhc
Q psy17050        113 KPYVCPI--CSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  138 (295)
                      +||.|.+  |++.|...+.|+.|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            3566655  6666666666666666655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=3.7e-05  Score=37.07  Aligned_cols=24  Identities=29%  Similarity=0.588  Sum_probs=11.2

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      .|.|..|...|..+..|+.||..|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvsh   27 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSH   27 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             eEEeHHHHHHHHHHHhheeeeecc
Confidence            344444444444444444444444

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.8e-05  Score=37.15  Aligned_cols=22  Identities=45%  Similarity=0.890  Sum_probs=9.2

Q ss_pred             cccchhccCChHhHHHHHHHhC
Q psy17050         89 CRYCYKAFADGGTLRKHERVHT  110 (295)
Q Consensus        89 C~~C~~~f~~~~~L~~H~~~h~  110 (295)
                      |..||+.|...+.|++|...|+
T Consensus         5 c~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTS
T ss_pred             HHHHhHHHHHHHHHHHHhhccc
Confidence            4444444444444444444443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=5.3e-05  Score=35.61  Aligned_cols=24  Identities=46%  Similarity=0.832  Sum_probs=11.6

Q ss_pred             ccccccccCChHHHHHHHHHhcCC
Q psy17050         61 CHDCGKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        61 C~~C~~~f~~~~~l~~H~~~h~~~   84 (295)
                      |+.|.+.|.++.-|+.|-+.|+++
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            444444444444444444444443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=4.1e-05  Score=36.02  Aligned_cols=26  Identities=46%  Similarity=0.732  Sum_probs=18.3

Q ss_pred             ccccchhccCChHhHHHHHHHhCCCC
Q psy17050         88 SCRYCYKAFADGGTLRKHERVHTGEK  113 (295)
Q Consensus        88 ~C~~C~~~f~~~~~L~~H~~~h~~~~  113 (295)
                      +|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=5.9e-05  Score=35.88  Aligned_cols=26  Identities=35%  Similarity=0.677  Sum_probs=18.1

Q ss_pred             cceecCcCccccCCHHHHHHHHhhcc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            46777777777777777777777664

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=5.4e-05  Score=40.20  Aligned_cols=27  Identities=33%  Similarity=0.489  Sum_probs=21.7

Q ss_pred             CCceecccchhhccCHHHHHHHHHhcc
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ++.|+|.+|++.|.+..+|--||+.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            457888888888888888888888774

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=7.7e-05  Score=39.61  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=23.9

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccCC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      .+.|.|.+|++.|.+...|--||+.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            45688999999999999998998888654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.32  E-value=8.3e-05  Score=34.35  Aligned_cols=24  Identities=21%  Similarity=0.555  Sum_probs=18.3

Q ss_pred             eecCcCccccCCHHHHHHHHhhcc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      |+|..|.++|..++.|.+|.+.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567788888888888888877763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00015  Score=34.88  Aligned_cols=28  Identities=32%  Similarity=0.615  Sum_probs=20.3

Q ss_pred             CcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        146 ATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       146 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      +..|.|..|...|...-.|+.||..|.+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3457777777777777777777777765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=9.2e-05  Score=35.73  Aligned_cols=22  Identities=18%  Similarity=0.564  Sum_probs=12.3

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQR   79 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~   79 (295)
                      ||.|..|+..|+++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3455555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00013  Score=34.64  Aligned_cols=24  Identities=33%  Similarity=0.588  Sum_probs=9.7

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy17050         58 IFPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        58 ~~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      ||+|..|++.-...++|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            334444444444444444444433

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=0.00015  Score=34.82  Aligned_cols=25  Identities=28%  Similarity=0.474  Sum_probs=17.5

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhc
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h  171 (295)
                      .+|.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677766  777777777777776665

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00011  Score=35.43  Aligned_cols=24  Identities=17%  Similarity=0.328  Sum_probs=22.3

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ||.|..|+..|.++..|..||...
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            699999999999999999999854

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00017  Score=38.41  Aligned_cols=26  Identities=19%  Similarity=0.570  Sum_probs=23.4

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      +.+||.|..|++.|....++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            67899999999999999999999643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.10  E-value=0.00016  Score=33.39  Aligned_cols=21  Identities=33%  Similarity=0.876  Sum_probs=8.7

Q ss_pred             ccccchhccCChHhHHHHHHH
Q psy17050         88 SCRYCYKAFADGGTLRKHERV  108 (295)
Q Consensus        88 ~C~~C~~~f~~~~~L~~H~~~  108 (295)
                      +|..|.++|..++.|.+|++.
T Consensus         2 kcglcersfveksalsrhqrv   22 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGG
T ss_pred             cccchHHHHHHHHHHHHHHHh
Confidence            344444444444444444433

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00019  Score=34.78  Aligned_cols=23  Identities=35%  Similarity=0.756  Sum_probs=10.3

Q ss_pred             CcccccchhccCChHhHHHHHHH
Q psy17050         86 PYSCRYCYKAFADGGTLRKHERV  108 (295)
Q Consensus        86 ~~~C~~C~~~f~~~~~L~~H~~~  108 (295)
                      ||.|.+|.+.....++|+.|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            34444444444444444444443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00025  Score=34.33  Aligned_cols=26  Identities=23%  Similarity=0.529  Sum_probs=16.0

Q ss_pred             cceecCcCccccCCHHHHHHHHhhcc
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      +||+|..|.......+.|+.|+++.|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            35666666666666666666665544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00022  Score=34.30  Aligned_cols=15  Identities=33%  Similarity=0.609  Sum_probs=5.9

Q ss_pred             hhhhcCCHHHHHHHH
Q psy17050        120 CSKAFNQRVVLREHI  134 (295)
Q Consensus       120 C~~~f~~~~~l~~H~  134 (295)
                      |++.|...+.|++|.
T Consensus        11 cdk~fs~ps~lkrhe   25 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHE   25 (29)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             ccccccCHHHHhhhh
Confidence            333444443343333

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00039  Score=33.59  Aligned_cols=25  Identities=20%  Similarity=0.563  Sum_probs=14.3

Q ss_pred             ceecCcCccccCCHHHHHHHHhhcc
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      ||+|.+|....++.++|..|++.-|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            5556666665566666666655433

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.81  E-value=0.00025  Score=35.11  Aligned_cols=21  Identities=19%  Similarity=0.526  Sum_probs=10.6

Q ss_pred             eecCcCccccCCHHHHHHHHh
Q psy17050        149 FECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      |.|.+|++.|..+..|.+|..
T Consensus         2 f~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHT
T ss_pred             cccccccchhhHHHHHHHHHH
Confidence            445555555555555555543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.78  E-value=0.00057  Score=33.80  Aligned_cols=26  Identities=42%  Similarity=0.906  Sum_probs=23.6

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      ||.|.+|++.|.++..|.+|...-|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68999999999999999999988773

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00055  Score=35.92  Aligned_cols=28  Identities=25%  Similarity=0.558  Sum_probs=23.6

Q ss_pred             CCcceecCc--CccccCCHHHHHHHHhhcc
Q psy17050        145 GATTFECKV--CGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       145 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  172 (295)
                      .++||.|..  |+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            578999954  9999999999999988874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00043  Score=36.84  Aligned_cols=21  Identities=33%  Similarity=0.861  Sum_probs=8.5

Q ss_pred             CCcccccchhccCChHhHHHH
Q psy17050         85 RPYSCRYCYKAFADGGTLRKH  105 (295)
Q Consensus        85 ~~~~C~~C~~~f~~~~~L~~H  105 (295)
                      +||.|.+|++.|-....+.+|
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHh
Confidence            334444444444444443333

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00059  Score=32.95  Aligned_cols=26  Identities=31%  Similarity=0.674  Sum_probs=20.4

Q ss_pred             CcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        113 KPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      +||+|.+|..-....++|..|++..|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            47788888888888888888887766

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00034  Score=34.65  Aligned_cols=27  Identities=22%  Similarity=0.548  Sum_probs=19.4

Q ss_pred             cceecCc--CccccCCHHHHHHHH-hhccC
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHL-VQHSD  173 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~~  173 (295)
                      +||.|.+  |.+.|.+.++...|. ++|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677777  888888877777775 56643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.00092  Score=30.75  Aligned_cols=22  Identities=18%  Similarity=0.594  Sum_probs=14.2

Q ss_pred             ceecccchhhccCHHHHHHHHH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      +|+|..|...|-.+..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5666666666666666666653

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.39  E-value=0.0007  Score=32.63  Aligned_cols=20  Identities=40%  Similarity=0.574  Sum_probs=9.8

Q ss_pred             cccccCChHHHHHHHHHhcC
Q psy17050         64 CGKTFNSRSSQQIHQRIHTG   83 (295)
Q Consensus        64 C~~~f~~~~~l~~H~~~h~~   83 (295)
                      |.+.|.+...|.+|...|++
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            44555554455555444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.36  E-value=0.0011  Score=31.93  Aligned_cols=28  Identities=39%  Similarity=0.845  Sum_probs=20.3

Q ss_pred             CCccccc--chhccCChHhHHHHHHHhCCC
Q psy17050         85 RPYSCRY--CYKAFADGGTLRKHERVHTGE  112 (295)
Q Consensus        85 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  112 (295)
                      +||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4667766  778888888888887777653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.34  E-value=0.0018  Score=29.76  Aligned_cols=22  Identities=18%  Similarity=0.640  Sum_probs=13.9

Q ss_pred             ceecCcCccccCCHHHHHHHHh
Q psy17050        148 TFECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      +|+|..|...|..+.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4666666666666666666654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0015  Score=34.20  Aligned_cols=26  Identities=31%  Similarity=0.788  Sum_probs=18.3

Q ss_pred             CCceec--ccchhhccCHHHHHHHHHhc
Q psy17050         23 PASHMC--EDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        23 ~~~~~C--~~C~~~f~~~~~l~~H~~~h   48 (295)
                      ++||.|  +-|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            567777  55777777777777776666

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0036  Score=29.57  Aligned_cols=25  Identities=24%  Similarity=0.627  Sum_probs=20.6

Q ss_pred             ceecCcCccccCCHHHHHHHHhhcc
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      .|+|+.|+.....+++|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4789999999999999999987643

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0015  Score=32.22  Aligned_cols=14  Identities=43%  Similarity=0.781  Sum_probs=5.8

Q ss_pred             chhccCChHhHHHH
Q psy17050         92 CYKAFADGGTLRKH  105 (295)
Q Consensus        92 C~~~f~~~~~L~~H  105 (295)
                      |.+.|++.++-.+|
T Consensus        10 C~KafsNsSDraKH   23 (31)
T d2glia4          10 CSKAFSNASDRAKH   23 (31)
T ss_dssp             CCCEESSSSTTHHH
T ss_pred             hhhhhcchhhhhhh
Confidence            44444444444444

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0049  Score=31.07  Aligned_cols=26  Identities=27%  Similarity=0.658  Sum_probs=16.3

Q ss_pred             cccCcchhhhcCCHHHHHHHHHHhcC
Q psy17050        114 PYVCPICSKAFNQRVVLREHIRAHHS  139 (295)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~~h~  139 (295)
                      .|.|..|++.|.++..+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            35666666666666666666665543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.71  E-value=0.005  Score=28.34  Aligned_cols=22  Identities=14%  Similarity=0.410  Sum_probs=13.5

Q ss_pred             eecCcCccccCCHHHHHHHHhh
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      |.|++|-+.|..+..+..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5566666666666666666544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0063  Score=28.83  Aligned_cols=24  Identities=29%  Similarity=0.357  Sum_probs=15.8

Q ss_pred             eecCcCccccCCHHHHHHHHhhcc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h~  172 (295)
                      -+|+.|..++.++..|+.|.++|.
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            456666666666667766666663

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.52  E-value=0.0058  Score=28.11  Aligned_cols=21  Identities=29%  Similarity=0.711  Sum_probs=10.7

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy17050         59 FPCHDCGKTFNSRSSQQIHQR   79 (295)
Q Consensus        59 ~~C~~C~~~f~~~~~l~~H~~   79 (295)
                      |.|+.|-+.|..+.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            445555555555555555543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0045  Score=34.03  Aligned_cols=27  Identities=30%  Similarity=0.587  Sum_probs=23.9

Q ss_pred             cceecCcCccccCCHHHHHHHHhhccC
Q psy17050        147 TTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       147 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ..|.|..|++.|.....|+.|...|--
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            458899999999999999999988854

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.006  Score=28.78  Aligned_cols=24  Identities=21%  Similarity=0.400  Sum_probs=16.4

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      .|.|+.|+.....++.|+.|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            366777777777777777776643

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.0053  Score=28.87  Aligned_cols=23  Identities=30%  Similarity=0.592  Sum_probs=18.8

Q ss_pred             ceecCcCccccCCHHHHHHHHhh
Q psy17050        148 TFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       148 ~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      ||+|..||+.|-.+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57888999998888888888643

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0059  Score=28.93  Aligned_cols=24  Identities=21%  Similarity=0.537  Sum_probs=15.7

Q ss_pred             ceecccchhhccCHHHHHHHHHhc
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h   48 (295)
                      +-+|+.|.....++..|+.|-+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            346666666666666666666665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.31  E-value=0.0064  Score=28.58  Aligned_cols=22  Identities=36%  Similarity=0.881  Sum_probs=14.4

Q ss_pred             ceecccchhhccCHHHHHHHHH
Q psy17050         25 SHMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      ||+|..||+.+..+..|..|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666777776666666666644

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.0096  Score=32.69  Aligned_cols=25  Identities=36%  Similarity=0.764  Sum_probs=15.2

Q ss_pred             ccccccccccccCChHHHHHHHHHh
Q psy17050         57 RIFPCHDCGKTFNSRSSQQIHQRIH   81 (295)
Q Consensus        57 ~~~~C~~C~~~f~~~~~l~~H~~~h   81 (295)
                      ..|.|..|++.|.....|+.|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            4456666666666666666665555

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.017  Score=29.03  Aligned_cols=28  Identities=21%  Similarity=0.505  Sum_probs=21.8

Q ss_pred             CceecccchhhccCHHHHHHHHHhcccc
Q psy17050         24 ASHMCEDCGEEYWDRQSLLVHKARHDVI   51 (295)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (295)
                      ..|.|..|++.|..+..|..|.....+.
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCC
Confidence            4688888888888888888887766543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.02  Score=27.42  Aligned_cols=18  Identities=22%  Similarity=0.652  Sum_probs=6.9

Q ss_pred             ecccchhhccCHHHHHHH
Q psy17050         27 MCEDCGEEYWDRQSLLVH   44 (295)
Q Consensus        27 ~C~~C~~~f~~~~~l~~H   44 (295)
                      .|..||+..++...++-|
T Consensus         4 tc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHH
T ss_pred             echhHHHHHhhccCceEE
Confidence            333333333333333333

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.023  Score=27.17  Aligned_cols=23  Identities=30%  Similarity=0.629  Sum_probs=13.3

Q ss_pred             eecCcCccccCCHHHHHHHHhhc
Q psy17050        149 FECKVCGCMLSSSPELCQHLVQH  171 (295)
Q Consensus       149 ~~C~~C~~~f~~~~~L~~H~~~h  171 (295)
                      |.|..||+...+...++.|+...
T Consensus         3 ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEeec
Confidence            55666666666666666665443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.01  E-value=0.019  Score=26.83  Aligned_cols=24  Identities=25%  Similarity=0.621  Sum_probs=17.2

Q ss_pred             eecCc--CccccCCHHHHHHHHhhcc
Q psy17050        149 FECKV--CGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       149 ~~C~~--C~~~f~~~~~L~~H~~~h~  172 (295)
                      |.|.+  |++.|+....|+.|.-+|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56655  8888888888887776653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.029  Score=26.55  Aligned_cols=23  Identities=26%  Similarity=0.593  Sum_probs=17.1

Q ss_pred             ecCc--CccccCCHHHHHHHHhhcc
Q psy17050        150 ECKV--CGCMLSSSPELCQHLVQHS  172 (295)
Q Consensus       150 ~C~~--C~~~f~~~~~L~~H~~~h~  172 (295)
                      .|+.  |++.|...+.++.|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            3554  8888888888888887763

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.019  Score=29.20  Aligned_cols=20  Identities=35%  Similarity=0.526  Sum_probs=15.4

Q ss_pred             ccccCChHHHHHHHHHhcCC
Q psy17050         65 GKTFNSRSSQQIHQRIHTGE   84 (295)
Q Consensus        65 ~~~f~~~~~l~~H~~~h~~~   84 (295)
                      ++.|..+..|..||+.|++|
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688888888888888775

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.72  E-value=0.03  Score=28.20  Aligned_cols=29  Identities=31%  Similarity=0.793  Sum_probs=21.5

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      ++..|.|.+|.+.+...+.+-+|..+-|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            45568888888888888888888766543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.61  E-value=0.019  Score=27.94  Aligned_cols=18  Identities=33%  Similarity=0.741  Sum_probs=7.5

Q ss_pred             hhhhcCCHHHHHHHHHHh
Q psy17050        120 CSKAFNQRVVLREHIRAH  137 (295)
Q Consensus       120 C~~~f~~~~~l~~H~~~~  137 (295)
                      |+..|+....|..|+-.|
T Consensus        11 C~A~ynk~wkL~AHLckH   28 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKH   28 (31)
T ss_dssp             GCCEESSHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhh
Confidence            444444444444444433

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.52  E-value=0.031  Score=27.20  Aligned_cols=28  Identities=29%  Similarity=0.633  Sum_probs=24.6

Q ss_pred             cceecCc--CccccCCHHHHHHHHhhccCC
Q psy17050        147 TTFECKV--CGCMLSSSPELCQHLVQHSDE  174 (295)
Q Consensus       147 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  174 (295)
                      +.|.|.+  |+-.|.....|..|+-.|+++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688877  999999999999999999874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.66  E-value=0.046  Score=27.10  Aligned_cols=24  Identities=38%  Similarity=0.718  Sum_probs=16.2

Q ss_pred             CCceecccchhhccCHHHHHHHHH
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      +..|.|.-||..|.+.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            345777777777777777777653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.32  E-value=0.21  Score=27.09  Aligned_cols=28  Identities=18%  Similarity=0.200  Sum_probs=21.5

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ++.+-.|++|+........|+.|+.-.|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3567788888888888888888877655

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.96  E-value=0.098  Score=28.46  Aligned_cols=27  Identities=11%  Similarity=0.212  Sum_probs=15.3

Q ss_pred             CccccccccccccCChHHHHHHHHHhc
Q psy17050         56 GRIFPCHDCGKTFNSRSSQQIHQRIHT   82 (295)
Q Consensus        56 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   82 (295)
                      +.+-.|++|+.......+|++|+..-+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            345556666666666666666654433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.048  Score=27.70  Aligned_cols=18  Identities=17%  Similarity=0.226  Sum_probs=10.0

Q ss_pred             cccCCHHHHHHHHhhccC
Q psy17050        156 CMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       156 ~~f~~~~~L~~H~~~h~~  173 (295)
                      +.|.....|..||+.|++
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            345555555555555554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.65  E-value=0.11  Score=30.51  Aligned_cols=28  Identities=18%  Similarity=0.400  Sum_probs=18.4

Q ss_pred             CCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         22 SPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      ....|+|.+|...|.+...|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3456777777777777777777766653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.12  Score=30.32  Aligned_cols=30  Identities=37%  Similarity=0.682  Sum_probs=26.6

Q ss_pred             CCCcceecCcCccccCCHHHHHHHHhhccC
Q psy17050        144 KGATTFECKVCGCMLSSSPELCQHLVQHSD  173 (295)
Q Consensus       144 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  173 (295)
                      .+...|+|..|...|.+...|..|+..|..
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            456679999999999999999999999864

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.059  Score=32.00  Aligned_cols=39  Identities=21%  Similarity=0.370  Sum_probs=21.9

Q ss_pred             CCCCceecccchhhccCHHHHHHHHHhcccccCCCCccccccccccc
Q psy17050         21 ASPASHMCEDCGEEYWDRQSLLVHKARHDVIRTERGRIFPCHDCGKT   67 (295)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~   67 (295)
                      ...+.|+|+.|++.|..-..++.   ..     .....|.|..|+..
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d-----~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FD-----PMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EE-----TTTTEEBCSSSCCB
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cC-----cCCCeEEecCCCCE
Confidence            34566777777777754444332   11     13356777777644

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=0.064  Score=25.33  Aligned_cols=19  Identities=21%  Similarity=0.480  Sum_probs=16.7

Q ss_pred             cchhhccCHHHHHHHHHhc
Q psy17050         30 DCGEEYWDRQSLLVHKARH   48 (295)
Q Consensus        30 ~C~~~f~~~~~l~~H~~~h   48 (295)
                      -|++.|.+.+.++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3899999999999998887

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.66  E-value=0.12  Score=24.43  Aligned_cols=17  Identities=29%  Similarity=0.477  Sum_probs=13.0

Q ss_pred             CccccCCHHHHHHHHhh
Q psy17050        154 CGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       154 C~~~f~~~~~L~~H~~~  170 (295)
                      |++.|+++..|..|.+-
T Consensus         8 c~kifsnrqylnhh~ky   24 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TCCEESSHHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHHH
Confidence            88888888877777654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.14  E-value=0.094  Score=24.37  Aligned_cols=24  Identities=42%  Similarity=0.816  Sum_probs=16.3

Q ss_pred             ccCcc--hhhhcCCHHHHHHHHHHhc
Q psy17050        115 YVCPI--CSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       115 ~~C~~--C~~~f~~~~~l~~H~~~~h  138 (295)
                      |.|.+  |++.|.....|+.|.-+|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45544  7777777777777776663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.77  E-value=0.039  Score=33.39  Aligned_cols=24  Identities=25%  Similarity=0.444  Sum_probs=17.3

Q ss_pred             CCceecccchhhccCHHHHHHHHH
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKA   46 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~   46 (295)
                      ...|-|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345777777777777777777754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.37  E-value=0.1  Score=26.20  Aligned_cols=27  Identities=26%  Similarity=0.638  Sum_probs=19.0

Q ss_pred             CCcccCcchhhhcCCHHHHHHHHHHhc
Q psy17050        112 EKPYVCPICSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  138 (295)
                      +..|.|.+|.+.|...+++-+|..+.|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            345777777777777777777776665

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.064  Score=32.41  Aligned_cols=26  Identities=23%  Similarity=0.455  Sum_probs=22.5

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      +...|-|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34568999999999999999999865

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.60  E-value=0.15  Score=24.10  Aligned_cols=19  Identities=32%  Similarity=0.716  Sum_probs=14.5

Q ss_pred             hhhhcCCHHHHHHHHHHhc
Q psy17050        120 CSKAFNQRVVLREHIRAHH  138 (295)
Q Consensus       120 C~~~f~~~~~l~~H~~~~h  138 (295)
                      |++.|+++..|..|.+..|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            8888888888877777655

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.42  E-value=0.17  Score=25.03  Aligned_cols=25  Identities=32%  Similarity=0.546  Sum_probs=19.4

Q ss_pred             CCcceecCcCccccCCHHHHHHHHh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLV  169 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~  169 (295)
                      ....|.|.-||-.|++.+.|..|..
T Consensus         5 kparf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cccceeccccceeecChhHHHhhhh
Confidence            3456888888888888888888843

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.92  E-value=0.15  Score=30.22  Aligned_cols=39  Identities=21%  Similarity=0.525  Sum_probs=24.1

Q ss_pred             CCccccccccccccCChHHHHHHHHHhcCCCCcccccchhcc
Q psy17050         55 RGRIFPCHDCGKTFNSRSSQQIHQRIHTGERPYSCRYCYKAF   96 (295)
Q Consensus        55 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   96 (295)
                      ....|.|+.|+++|.....++   ..-.....|.|..|+...
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBC
T ss_pred             cCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCEE
Confidence            346688888888886544332   233344558888887543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.22  E-value=0.13  Score=26.94  Aligned_cols=12  Identities=25%  Similarity=0.534  Sum_probs=6.2

Q ss_pred             Cceecccchhhc
Q psy17050         24 ASHMCEDCGEEY   35 (295)
Q Consensus        24 ~~~~C~~C~~~f   35 (295)
                      +.|.|..||..+
T Consensus         4 ~~~~C~vCG~i~   15 (37)
T d1nnqa2           4 KVYICPICGYTA   15 (37)
T ss_dssp             CEEECTTTCCEE
T ss_pred             cEEECCCCCCEe
Confidence            345555555543

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.69  E-value=0.43  Score=24.02  Aligned_cols=25  Identities=28%  Similarity=0.393  Sum_probs=20.4

Q ss_pred             CCceecccchhhccCHHHHHHHHHh
Q psy17050         23 PASHMCEDCGEEYWDRQSLLVHKAR   47 (295)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~   47 (295)
                      ++.|.|+.|-+..++...|..|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            5678888888888888888888764

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.87  E-value=0.8  Score=22.98  Aligned_cols=26  Identities=23%  Similarity=0.374  Sum_probs=21.3

Q ss_pred             CCcceecCcCccccCCHHHHHHHHhh
Q psy17050        145 GATTFECKVCGCMLSSSPELCQHLVQ  170 (295)
Q Consensus       145 ~~~~~~C~~C~~~f~~~~~L~~H~~~  170 (295)
                      -.+.|.|.+|-+-..+...|.+|+..
T Consensus         4 lpkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           4 LPKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCeeeeehhhhhhhCCHHHHHHHHHh
Confidence            45778888888888888888888764

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.55  E-value=0.52  Score=22.30  Aligned_cols=17  Identities=18%  Similarity=0.604  Sum_probs=7.6

Q ss_pred             hhhhcCCHHHHHHHHHH
Q psy17050        120 CSKAFNQRVVLREHIRA  136 (295)
Q Consensus       120 C~~~f~~~~~l~~H~~~  136 (295)
                      |+..|.++.+++.|...
T Consensus        10 cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3          10 CDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CCCEESSHHHHHHHHHH
T ss_pred             cceEEeehHHHHHHHhh
Confidence            44444444444444443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=82.11  E-value=0.28  Score=25.46  Aligned_cols=11  Identities=36%  Similarity=0.773  Sum_probs=5.5

Q ss_pred             Cceecccchhh
Q psy17050         24 ASHMCEDCGEE   34 (295)
Q Consensus        24 ~~~~C~~C~~~   34 (295)
                      +-|.|..||.+
T Consensus         4 ~~~vC~vCGyi   14 (36)
T d1yuza2           4 KFHLCPICGYI   14 (36)
T ss_dssp             CEEECSSSCCE
T ss_pred             CEEECCCCCCE
Confidence            34555555554

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.49  E-value=1.2  Score=29.97  Aligned_cols=31  Identities=13%  Similarity=0.231  Sum_probs=20.5

Q ss_pred             CCCCCCceecccchhhccCHHHHHHHHHhcc
Q psy17050         19 PPASPASHMCEDCGEEYWDRQSLLVHKARHD   49 (295)
Q Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   49 (295)
                      +...+.+-.|-.|.+.|.+...+..|++..|
T Consensus         9 ~~~e~~~~~CLFCd~~f~s~~~~l~H~k~~H   39 (121)
T d1wira_           9 PAHGRQHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CCCCcccceecccCCccCCHHHHHHHHHHhh
Confidence            3344556667777777777777777776654