Psyllid ID: psy17188

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500----
Protein Sequence
MERRTQYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHccccccccccccccccEEEEcccccEEEEccccEEEEcccccEEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEccccEEEcccccccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccccEEcccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEccccccccccccccccccccEEEEEEcccccEEEEEEccccEEEccccccccccccccccccccEEEEEEcccccccEEEEEEccccEEEEEcccccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccccEEEccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEcccccccccEEEEEEcccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEcccccEEEEEcccccEEEccccccccccccEEEEEEcccccEEEEccEEEEEEcccccEEEEEEEccccEEEEEEEccccEEEEcccccEEEEEEccccccEEEEEEcccccEEEEccccEEEEEEcccccEEEEEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccccEEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEccccccEEEEEEcccccEEEEEEEccccEEEEEEcccccEEEEEEccccccccccEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEcccccc
Coil and Loop (DISEMBL)
merrtqyphylggaspHEIQAAAAAGAYgalhnnlppslnayprpplvgydphsqmraplgpaslagipggkpaysyhvttdgqmqpvpfppdaligpgiprharqintlSHGEVVCAvtisnptkyvytggkgcvkvwdisqpgsktpvsqldclqrdnyirsvkllpdgrtlivggeasnlsiwdlasptprikaeltssapacyalaispdskvcfsccsdgniavwdLHNQTLVRQFqghtdgascidisadgtklwtggldntvrswdlregcvkvwdisqpgsktpvsqldclqrdnyirsvkllpdgrtlivggeasnlsiwdlasptprikaeltssapacyalaispdskspffsshhyKSCVKvwdisqpgsktpvsqldclqrdnyirsvkllpdgrtlivggeasnlsiwdlasptprikaeltssapacyalaispdskvcfsccsdgniavwdLHNQTLVRQFqghtdgascidisadgtklwtggldnt
Flexible Loop (DISEMBL)
MERRTQYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISqpgsktpvsqldclqRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVwdisqpgsktpvsqldclQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDisadgtklwtggldnt
Low Complexity Region (SEG)
MERRTQYPHYLGGASPHEIQaaaaagaygaLHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT
Disordered region (IsUnstruct)
**********************AAAGAYGALH******************************************YSYHVTT********FPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD*KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG*****
Disordered Region (DISOPRED)
*ERRTQYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN*
Disordered Region (DISEMBL)
********HYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT
Disordered Region (DISPRO)
*****QYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERRTQYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	504	2.2.26 [Sep-21-2011]
Q62441	773	Transducin-like enhancer	no	N/A	0.591	0.385	0.704	1e-128
Q04727	773	Transducin-like enhancer	yes	N/A	0.591	0.385	0.704	1e-128
Q9JIT3	764	Transducin-like enhancer	yes	N/A	0.601	0.396	0.705	1e-127
Q04726	772	Transducin-like enhancer	no	N/A	0.601	0.392	0.700	1e-127
O42478	772	Transducin-like enhancer	N/A	N/A	0.577	0.376	0.716	1e-127
Q07141	748	Transducin-like enhancer	no	N/A	0.591	0.398	0.701	1e-127
Q04724	770	Transducin-like enhancer	no	N/A	0.593	0.388	0.712	1e-127
Q08122	772	Transducin-like enhancer	yes	N/A	0.621	0.405	0.680	1e-126
Q62440	770	Transducin-like enhancer	no	N/A	0.549	0.359	0.761	1e-126
O13168	535	Protein groucho-1 (Fragme	no	N/A	0.609	0.573	0.690	1e-125

>sp|Q62441|TLE4_MOUSE Transducin-like enhancer protein 4 OS=Mus musculus GN=Tle4 PE=1 SV=4

 Score =  457 bits (1177), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/325 (70%), Positives = 251/325 (77%), Gaps = 27/325 (8%)

Query: 20  QAAAAAGAYGALHNNLPPSLNA----------YPRPPLVGYDPHSQMRAPLGPASLAGIP 69
           +  +   AY  LHN + P ++A          Y R P+VG+DPH  MR P  P +L GIP
Sbjct: 385 ELTSPGAAYAGLHN-ISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPAIPPNLTGIP 443

Query: 70  GGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVY 129
           GGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VY
Sbjct: 444 GGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 503

Query: 130 TGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189
           TGGKGCVKVWDIS PG+K+PVSQLDCL RDNYIRS +LLPDGRTLIVGGEAS LSIWDLA
Sbjct: 504 TGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLA 563

Query: 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 249
           +PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS
Sbjct: 564 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 623

Query: 250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           CIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I S+ 
Sbjct: 624 CIDISNDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQIFSLG 667

Query: 310 LLPDGRTLIVGGEASNLSIWDLASP 334
             P G  L VG E SN+ +  +  P
Sbjct: 668 YCPTGEWLAVGMENSNVEVLHVTKP 692

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.
Mus musculus (taxid: 10090)

>sp|Q04727|TLE4_HUMAN Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3

 Score =  457 bits (1176), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/325 (70%), Positives = 251/325 (77%), Gaps = 27/325 (8%)

Query: 20  QAAAAAGAYGALHNNLPPSLNA----------YPRPPLVGYDPHSQMRAPLGPASLAGIP 69
           +  +   AY  LHN + P ++A          Y R P+VG+DPH  MR P  P +L GIP
Sbjct: 385 ELTSPGAAYAGLHN-ISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPAIPPNLTGIP 443

Query: 70  GGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVY 129
           GGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VY
Sbjct: 444 GGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 503

Query: 130 TGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189
           TGGKGCVKVWDIS PG+K+PVSQLDCL RDNYIRS +LLPDGRTLIVGGEAS LSIWDLA
Sbjct: 504 TGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLA 563

Query: 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 249
           +PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS
Sbjct: 564 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 623

Query: 250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           CIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I S+ 
Sbjct: 624 CIDISNDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQIFSLG 667

Query: 310 LLPDGRTLIVGGEASNLSIWDLASP 334
             P G  L VG E SN+ +  +  P
Sbjct: 668 YCPTGEWLAVGMENSNVEVLHVTKP 692

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Homo sapiens (taxid: 9606)

>sp|Q9JIT3|TLE3_RAT Transducin-like enhancer protein 3 OS=Rattus norvegicus GN=Tle3 PE=2 SV=1

 Score =  457 bits (1175), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/329 (70%), Positives = 255/329 (77%), Gaps = 26/329 (7%)

Query: 15  SPHEIQAAAAA-GAYGALHNNLPPSLNA--------YPRPPLVGYDPHSQMRAPLGPASL 65
           S HE+  +  +  AY  LHN +P  ++A        Y R P+VG+DPH  MRA   P+SL
Sbjct: 372 SHHEMNGSLTSPSAYAGLHN-IPSQMSAAAAAAAAAYGRSPMVGFDPHPPMRATGLPSSL 430

Query: 66  AGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPT 125
           A IPGGKPAYS+HV+ DGQMQPVPFP DAL GPGIPRHARQINTLSHGEVVCAVTISNPT
Sbjct: 431 ASIPGGKPAYSFHVSADGQMQPVPFPHDALAGPGIPRHARQINTLSHGEVVCAVTISNPT 490

Query: 126 KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 185
           ++VYTGGKGCVK+WDISQPGSK+P+SQLDCL RDNYIRS KLLPDGRTLIVGGEAS L+I
Sbjct: 491 RHVYTGGKGCVKIWDISQPGSKSPISQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTI 550

Query: 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 245
           WDLASPTPRIKAELTSSAPACYALAISPD+KVCFSCCSDGNIAVWDLHNQTLVRQFQGHT
Sbjct: 551 WDLASPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 610

Query: 246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI 305
           DGASCIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I
Sbjct: 611 DGASCIDISHDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQI 654

Query: 306 RSVKLLPDGRTLIVGGEASNLSIWDLASP 334
            S+   P G  L VG E+SN+ +     P
Sbjct: 655 FSLGYCPTGEWLAVGMESSNVEVLHHTKP 683

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Rattus norvegicus (taxid: 10116)

>sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2

 Score =  456 bits (1173), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/334 (70%), Positives = 257/334 (76%), Gaps = 31/334 (9%)

Query: 15  SPHEIQAAAAA-GAYGALHNNLPPSLNA--------YPRPPLV-----GYDPHSQMRAPL 60
           S HE+  +  + GAY  LHN +PP ++A        Y R P+V     G+DPH  MRA  
Sbjct: 375 SHHEMNGSLTSPGAYAGLHN-IPPQMSAAAAAAAAAYGRSPMVSFGAVGFDPHPPMRATG 433

Query: 61  GPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVT 120
            P+SLA IPGGKPAYS+HV+ DGQMQPVPFP DAL GPGIPRHARQINTLSHGEVVCAVT
Sbjct: 434 LPSSLASIPGGKPAYSFHVSADGQMQPVPFPHDALAGPGIPRHARQINTLSHGEVVCAVT 493

Query: 121 ISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 180
           ISNPT++VYTGGKGCVK+WDISQPGSK+P+SQLDCL RDNYIRS KLLPDGRTLIVGGEA
Sbjct: 494 ISNPTRHVYTGGKGCVKIWDISQPGSKSPISQLDCLNRDNYIRSCKLLPDGRTLIVGGEA 553

Query: 181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 240
           S L+IWDLASPTPRIKAELTSSAPACYALAISPD+KVCFSCCSDGNIAVWDLHNQTLVRQ
Sbjct: 554 STLTIWDLASPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQ 613

Query: 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300
           FQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG                 QL    
Sbjct: 614 FQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHD 657

Query: 301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
             + I S+   P G  L VG E+SN+ +     P
Sbjct: 658 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKP 691

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Homo sapiens (taxid: 9606)

>sp|O42478|TLE4_XENLA Transducin-like enhancer protein 4 OS=Xenopus laevis GN=tle4 PE=1 SV=2

 Score =  455 bits (1170), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/318 (71%), Positives = 250/318 (78%), Gaps = 27/318 (8%)

Query: 27  AYGALHNNLPPSLNA----------YPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYS 76
           AY +LH+ + P ++A          Y R P+VG+DPH  MR P  P +L GIPGGKPAYS
Sbjct: 391 AYASLHS-ISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPGIPPNLTGIPGGKPAYS 449

Query: 77  YHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCV 136
           +HV+ DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCV
Sbjct: 450 FHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCV 509

Query: 137 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 196
           KVWDIS PG+K+PVSQLDCL RDNYIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIK
Sbjct: 510 KVWDISHPGNKSPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIK 569

Query: 197 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD 256
           AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS D
Sbjct: 570 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 629

Query: 257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 316
           GTKLWTGGLDNTVRSWDLREG                 QL      + I S+   P G  
Sbjct: 630 GTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQIFSLGYCPTGEW 673

Query: 317 LIVGGEASNLSIWDLASP 334
           L VG E SN+ +  +  P
Sbjct: 674 LAVGMENSNVEVLHVTKP 691

Transcriptional corepressor. Functions with ripply2.2/bowline to down regulate transcription of tbx6-dependent gene expression. Represses transcription of siamois and nodal3.

Xenopus laevis (taxid: 8355)

>sp|Q07141|TLE4_RAT Transducin-like enhancer protein 4 OS=Rattus norvegicus GN=Tle4 PE=2 SV=2

 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/325 (70%), Positives = 251/325 (77%), Gaps = 27/325 (8%)

Query: 20  QAAAAAGAYGALHNNLPPSLNA----------YPRPPLVGYDPHSQMRAPLGPASLAGIP 69
           +  +   AY  LHN + P ++A          Y R P+VG+DPH  MR P  P +L GIP
Sbjct: 360 ELTSPGAAYAGLHN-ISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPAIPPNLTGIP 418

Query: 70  GGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVY 129
           GGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VY
Sbjct: 419 GGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 478

Query: 130 TGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 189
           TGGKGCVKVWDI+ PG+K+PVSQLDCL RDNYIRS +LLPDGRTLIVGGEAS LSIWDLA
Sbjct: 479 TGGKGCVKVWDITDPGNKSPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLA 538

Query: 190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 249
           +PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS
Sbjct: 539 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 598

Query: 250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           CIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I S+ 
Sbjct: 599 CIDISNDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQIFSLG 642

Query: 310 LLPDGRTLIVGGEASNLSIWDLASP 334
             P G  L VG E SN+ +  +  P
Sbjct: 643 YCPTGEWLAVGMENSNVEVLHVTKP 667

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Rattus norvegicus (taxid: 10116)

>sp|Q04724|TLE1_HUMAN Transducin-like enhancer protein 1 OS=Homo sapiens GN=TLE1 PE=1 SV=2

 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/323 (71%), Positives = 251/323 (77%), Gaps = 24/323 (7%)

Query: 20  QAAAAAGAYGALHNNLP--------PSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGG 71
           +  +   AY +LHN  P         ++ AY R P+VG+DP   MR P  P +LAGIPGG
Sbjct: 383 ELTSPGAAYASLHNMSPQMSAAAAAAAVVAYGRSPMVGFDPPPHMRVPTIPPNLAGIPGG 442

Query: 72  KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTG 131
           KPAYS+HVT DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VYTG
Sbjct: 443 KPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG 502

Query: 132 GKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 191
           GKGCVKVWDIS PG+K+PVSQLDCL RDNYIRS KLLPDG TLIVGGEAS LSIWDLA+P
Sbjct: 503 GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 562

Query: 192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 251
           TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI
Sbjct: 563 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 622

Query: 252 DISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           DIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I S+   
Sbjct: 623 DISNDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQIFSLGYC 666

Query: 312 PDGRTLIVGGEASNLSIWDLASP 334
           P G  L VG E+SN+ +  +  P
Sbjct: 667 PTGEWLAVGMESSNVEVLHVNKP 689

Transcriptional corepressor that binds to a number of transcription factors. Inhibits NF-kappa-B-regulated gene expression. Inhibits the transcriptional activation mediated by FOXA2, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES. Unusual function as coactivator for ESRRG.

Homo sapiens (taxid: 9606)

>sp|Q08122|TLE3_MOUSE Transducin-like enhancer protein 3 OS=Mus musculus GN=Tle3 PE=1 SV=3

 Score =  453 bits (1165), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/344 (68%), Positives = 258/344 (75%), Gaps = 31/344 (9%)

Query: 5   TQYPHYLGGASPHEIQAAAAA-GAYGALHNNLPPSLNA--------YPRPPLV-----GY 50
           + YP      S HE+  +  +  AY  LHN +P  ++A        Y R P+V     G+
Sbjct: 365 SSYPAPFAMMSHHEMNGSLTSPSAYAGLHN-IPSQMSAAAAAAAAAYGRSPMVSFGAVGF 423

Query: 51  DPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL 110
           DPH  MRA   P+SLA IPGGKPAYS+HV+ DGQMQPVPFP DAL GPGIPRHARQINTL
Sbjct: 424 DPHPPMRATGLPSSLASIPGGKPAYSFHVSADGQMQPVPFPHDALAGPGIPRHARQINTL 483

Query: 111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
           SHGEVVCAVTISNPT++VYTGGKGCVK+WDISQPGSK+P+SQLDCL RDNYIRS KLLPD
Sbjct: 484 SHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPISQLDCLNRDNYIRSCKLLPD 543

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
           GRTLIVGGEAS L+IWDLASPTPRIKAELTSSAPACYALAISPD+KVCFSCCSDGNIAVW
Sbjct: 544 GRTLIVGGEASTLTIWDLASPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVW 603

Query: 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK 290
           DLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG             
Sbjct: 604 DLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREG------------- 650

Query: 291 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
               QL      + I S+   P G  L VG E+SN+ +     P
Sbjct: 651 ---RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKP 691

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES (By similarity). May play an important role during spermatogenesis.

Mus musculus (taxid: 10090)

>sp|Q62440|TLE1_MOUSE Transducin-like enhancer protein 1 OS=Mus musculus GN=Tle1 PE=1 SV=2

 Score =  450 bits (1158), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/293 (76%), Positives = 239/293 (81%), Gaps = 16/293 (5%)

Query: 42  YPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIP 101
           Y R P+VG+DP   MR P  P +LAGIPGGKPAYS+HVT DGQMQPVPFPPDALIGPGIP
Sbjct: 413 YGRSPMVGFDPPPHMRVPSIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIP 472

Query: 102 RHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNY 161
           RHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDNY
Sbjct: 473 RHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNY 532

Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           IRS KLLPDG TLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFSC
Sbjct: 533 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 592

Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV 281
           CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG    
Sbjct: 593 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG---- 648

Query: 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                        QL      + I S+   P G  L VG E+SN+ +  +  P
Sbjct: 649 ------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 689

Transcriptional corepressor that binds to a number of transcription factors. Inhibits NF-kappa-B-regulated gene expression. Inhibits the transcriptional activation mediated by FOXA2, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES. Unusual function as coactivator for ESRRG.

Mus musculus (taxid: 10090)

>sp|O13168|TLE1_DANRE Protein groucho-1 (Fragment) OS=Danio rerio GN=gro1 PE=1 SV=1

 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 251/330 (76%), Gaps = 23/330 (6%)

Query: 10  YLGGASPHEIQAAAAAGAYGALHNNLPPSLNA-----YPRPPLVGYDPHSQMRAPLGPAS 64
           ++ G  P    +  + G Y  LH  + P ++A     Y R  + G+DPH  MRAP+ PAS
Sbjct: 143 FMMGHHPEMNGSLTSPGVYAGLH--ISPQMSAAAAAAYGRTSMPGFDPHPHMRAPVLPAS 200

Query: 65  LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 124
           L  IPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP
Sbjct: 201 LTSIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 260

Query: 125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184
           T++VYTGGKGCVK+WDISQPGSK+PVSQLDCL RDNYIRS KLLPDGRTLI GGE S L+
Sbjct: 261 TRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIAGGEVSTLT 320

Query: 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244
           IWDLAS TPRIKAELTSSAPACYALAISPD+KVCFSCCSDGNIAVWDLHNQTLVRQFQGH
Sbjct: 321 IWDLASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 380

Query: 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304
           TDGASCIDIS DG KLWTGGLDNTVRSWDLREG                 QL      + 
Sbjct: 381 TDGASCIDISHDGPKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQ 424

Query: 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           I S+   P G  L VG E+SN+ +     P
Sbjct: 425 IFSLGYCPTGEWLAVGMESSNVEVLHHTKP 454

Transcriptional corepressor that binds to a number of transcription factors.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	504
242013098	733	protein groucho, putative [Pediculus hum	0.611	0.420	0.786	1e-144
189234796	813	PREDICTED: similar to groucho protein [T	0.615	0.381	0.803	1e-143
270002842	563	groucho-like protein [Tribolium castaneu	0.619	0.554	0.798	1e-142
328704354	762	PREDICTED: transducin-like enhancer prot	0.617	0.408	0.771	1e-133
158298100	752	AGAP010324-PA [Anopheles gambiae str. PE	0.609	0.408	0.757	1e-133
170046693	747	groucho protein [Culex quinquefasciatus]	0.601	0.405	0.738	1e-132
157108316	737	groucho protein (enhancer of split) [Aed	0.597	0.408	0.739	1e-132
312379931	725	hypothetical protein AND_08087 [Anophele	0.611	0.424	0.745	1e-131
259013506	717	groucho protein [Saccoglossus kowalevski	0.571	0.401	0.75	1e-129
383421187	755	transducin-like enhancer protein 3 isofo	0.601	0.401	0.711	1e-128

>gi|242013098|ref|XP_002427252.1| protein groucho, putative [Pediculus humanus corporis] gi|212511585|gb|EEB14514.1| protein groucho, putative [Pediculus humanus corporis]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/332 (78%), Positives = 272/332 (81%), Gaps = 24/332 (7%)

Query: 7   YPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPH----SQMRAPLGP 62
           YPHYL GA  H++   A AGAYGALHNNLPP+LN YPRP LVGYDP     + MRAPL P
Sbjct: 341 YPHYLAGAPTHDL---AQAGAYGALHNNLPPALNNYPRPSLVGYDPQVPQVAHMRAPLNP 397

Query: 63  ASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTIS 122
           A L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTIS
Sbjct: 398 A-LGGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTIS 456

Query: 123 NPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 182
           NPTKYVYTGGKGCVKVWDISQPGSK+ VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN
Sbjct: 457 NPTKYVYTGGKGCVKVWDISQPGSKSAVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 516

Query: 183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 242
           LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ
Sbjct: 517 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 576

Query: 243 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302
           GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL      
Sbjct: 577 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFT 620

Query: 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           + I S+   P G  L VG E SN+ +     P
Sbjct: 621 SQIFSLGYCPTGEWLAVGMENSNVEVLHATKP 652

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234796|ref|XP_967319.2| PREDICTED: similar to groucho protein [Tribolium castaneum]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/330 (80%), Positives = 278/330 (84%), Gaps = 20/330 (6%)

Query: 6   QYPHYLGGASPHEIQAAAAAGAYGALHNNLPPSLNAYPRPPL-VGYDPHSQMRAPLGPAS 64
           QYP YL  A+PH++QAAAAAGAY  LHNNLPP+LN YPRPPL VGYDPHSQMRAP+ P  
Sbjct: 422 QYPPYL--AAPHDLQAAAAAGAYSGLHNNLPPALNNYPRPPLQVGYDPHSQMRAPVVPG- 478

Query: 65  LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 124
           L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP
Sbjct: 479 LGGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 538

Query: 125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184
           TKYVYTGGKGCVKVWDISQPGSK+PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS
Sbjct: 539 TKYVYTGGKGCVKVWDISQPGSKSPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 598

Query: 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244
           IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG+IAVWDLHNQTLVRQFQGH
Sbjct: 599 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGHIAVWDLHNQTLVRQFQGH 658

Query: 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304
           TDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL      + 
Sbjct: 659 TDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFSSQ 702

Query: 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           I S+   P G  L VG E SN+ +     P
Sbjct: 703 IFSLGYCPTGEWLAVGMENSNVEVLHATKP 732

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002842|gb|EEZ99289.1| groucho-like protein [Tribolium castaneum]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 278/333 (83%), Gaps = 21/333 (6%)

Query: 6   QYPHYLGGAS---PHEIQAAAAAGAYGALHNNLPPSLNAYPRPPL-VGYDPHSQMRAPLG 61
           QYP YL G S   PH++QAAAAAGAY  LHNNLPP+LN YPRPPL VGYDPHSQMRAP+ 
Sbjct: 167 QYPPYLAGMSNGAPHDLQAAAAAGAYSGLHNNLPPALNNYPRPPLQVGYDPHSQMRAPVV 226

Query: 62  PASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTI 121
           P  L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTI
Sbjct: 227 PG-LGGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTI 285

Query: 122 SNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 181
           SNPTKYVYTGGKGCVKVWDISQPGSK+PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS
Sbjct: 286 SNPTKYVYTGGKGCVKVWDISQPGSKSPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 345

Query: 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241
           NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG+IAVWDLHNQTLVRQF
Sbjct: 346 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGHIAVWDLHNQTLVRQF 405

Query: 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301
           QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL     
Sbjct: 406 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDF 449

Query: 302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
            + I S+   P G  L VG E SN+ +     P
Sbjct: 450 SSQIFSLGYCPTGEWLAVGMENSNVEVLHATKP 482

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328704354|ref|XP_003242466.1| PREDICTED: transducin-like enhancer protein 3-like [Acyrthosiphon pisum]

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/333 (77%), Positives = 273/333 (81%), Gaps = 22/333 (6%)

Query: 6   QYPHYL-GGASPHEIQAAAAAGAYGA-LHNNLPPS--LNAYPRPPLVGYDPHSQMRAPLG 61
           QYPHYL GGA+PH++QAAAAA      LHNNLPPS  LN+YPRP LVGYDPH+QMRAPLG
Sbjct: 367 QYPHYLAGGANPHDLQAAAAAAGAYGALHNNLPPSAALNSYPRPALVGYDPHAQMRAPLG 426

Query: 62  PASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTI 121
           P        GKPAYS+HV+ +GQMQPVPFPPDAL+GPGIPRHARQINTL HGEVVCAVTI
Sbjct: 427 PGLGIPG--GKPAYSFHVSAEGQMQPVPFPPDALMGPGIPRHARQINTLGHGEVVCAVTI 484

Query: 122 SNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 181
           SNPTKYVYTGGKGCVKVWDISQPGSK+PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS
Sbjct: 485 SNPTKYVYTGGKGCVKVWDISQPGSKSPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 544

Query: 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241
           NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF
Sbjct: 545 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 604

Query: 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301
           QGHTDGASCIDIS+DG+KLWTGGLDNTVRSWDLREG                 QL     
Sbjct: 605 QGHTDGASCIDISSDGSKLWTGGLDNTVRSWDLREG----------------RQLQQHDF 648

Query: 302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
            + I S+   P G  L VG E SN+ +     P
Sbjct: 649 SSQIFSLGYCPTGEWLAVGMENSNVEVLHALKP 681

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158298100|ref|XP_318239.4| AGAP010324-PA [Anopheles gambiae str. PEST] gi|157014491|gb|EAA13394.5| AGAP010324-PA [Anopheles gambiae str. PEST]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/330 (75%), Positives = 268/330 (81%), Gaps = 23/330 (6%)

Query: 7   YPHYLGGASPHEIQAAAAAGAYGA--LHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPAS 64
           YP YL GA PH++QAAAAA AYG   +HNNLP SLN Y R PL  +DPHSQMRAPLGP  
Sbjct: 363 YPPYLAGA-PHDLQAAAAAAAYGGPGVHNNLPHSLNNYARAPL-AFDPHSQMRAPLGPI- 419

Query: 65  LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 124
             GIPGGKPAYS+HV  +GQMQPVPFP DAL+GPGIPRHARQI++L+HGEVVCAVTISNP
Sbjct: 420 --GIPGGKPAYSFHVNAEGQMQPVPFPQDALVGPGIPRHARQISSLNHGEVVCAVTISNP 477

Query: 125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184
           TKYVYTGGKGCVK WDISQPG+K+PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS
Sbjct: 478 TKYVYTGGKGCVKAWDISQPGNKSPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 537

Query: 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244
           IWDLASPTPRIKAELTS+APACYALAISPDSKVCFSCCSDGNIAVWDL NQTLVRQFQGH
Sbjct: 538 IWDLASPTPRIKAELTSNAPACYALAISPDSKVCFSCCSDGNIAVWDLQNQTLVRQFQGH 597

Query: 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304
           TDGASCIDISADG+KLWTGGLDNTVRSWDLREG                 QL      + 
Sbjct: 598 TDGASCIDISADGSKLWTGGLDNTVRSWDLREG----------------RQLQQHDFSSQ 641

Query: 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           I S+   P G  L VG E SN+ +     P
Sbjct: 642 IFSLGYCPTGEWLAVGMENSNVEVLHATKP 671

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046693|ref|XP_001850888.1| groucho protein [Culex quinquefasciatus] gi|167869384|gb|EDS32767.1| groucho protein [Culex quinquefasciatus]

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 246/333 (73%), Positives = 263/333 (78%), Gaps = 30/333 (9%)

Query: 7   YPHYLGG---ASPHEIQAAAAAGAYGA--LHNNLPPSLNAYPRPPLVGYDPHSQMRAPLG 61
           YP YLGG    +PHE+QAA     YG   +HNNLP SLN Y R PL  +DPH QMRAPLG
Sbjct: 359 YPPYLGGPLNGAPHELQAA-----YGGPGVHNNLPHSLNNYGRAPLA-FDPHPQMRAPLG 412

Query: 62  PASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTI 121
           P +   IPGGKPAYS+HV  +GQMQPVPFP DAL+GPGIPRHARQI++L+HGEVVCAVTI
Sbjct: 413 PIA---IPGGKPAYSFHVNAEGQMQPVPFPQDALVGPGIPRHARQISSLNHGEVVCAVTI 469

Query: 122 SNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 181
           SNPTKYVYTGGKGCVK WDISQPG+K PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS
Sbjct: 470 SNPTKYVYTGGKGCVKAWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 529

Query: 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241
           NLSIWDLASPTPRIKAELTS+APACYALAISPDSKVCFSCCSDGNIAVWDL NQTLVRQF
Sbjct: 530 NLSIWDLASPTPRIKAELTSNAPACYALAISPDSKVCFSCCSDGNIAVWDLQNQTLVRQF 589

Query: 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301
           QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL     
Sbjct: 590 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDF 633

Query: 302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
            + I S+   P G  L VG E SN+ +     P
Sbjct: 634 SSQIFSLGYCPTGEWLAVGMENSNVEVLHATKP 666

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108316|ref|XP_001650173.1| groucho protein (enhancer of split) [Aedes aegypti] gi|108879346|gb|EAT43571.1| AAEL005009-PA [Aedes aegypti]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/330 (73%), Positives = 262/330 (79%), Gaps = 29/330 (8%)

Query: 7   YPHYLGGASPHEIQAAAAAGAYGA--LHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPAS 64
           YP YLG  +PHE+QAA     YG   +HNNLP SLN Y R PL  +DPH QMRAPLGP +
Sbjct: 354 YPPYLG--APHELQAA-----YGGPGVHNNLPHSLNNYARAPL-AFDPHPQMRAPLGPIA 405

Query: 65  LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 124
              IPGGKPAYS+HV  +GQMQPVPFP DAL+GPGIPRHARQI++L+HGEVVCAVTISNP
Sbjct: 406 ---IPGGKPAYSFHVNAEGQMQPVPFPQDALVGPGIPRHARQISSLNHGEVVCAVTISNP 462

Query: 125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184
           TKYVYTGGKGCVK WDISQPG+K PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS
Sbjct: 463 TKYVYTGGKGCVKAWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 522

Query: 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244
           IWDLASPTPRIKAELTS+APACYALAISPDSKVCFSCCSDGNIAVWDL NQTL+RQFQGH
Sbjct: 523 IWDLASPTPRIKAELTSNAPACYALAISPDSKVCFSCCSDGNIAVWDLQNQTLLRQFQGH 582

Query: 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304
           TDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL      + 
Sbjct: 583 TDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQ 626

Query: 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           I S+   P G  L VG E SN+ +     P
Sbjct: 627 IFSLGYCPTGEWLAVGMENSNVEVLHATKP 656

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379931|gb|EFR26069.1| hypothetical protein AND_08087 [Anopheles darlingi]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/334 (74%), Positives = 268/334 (80%), Gaps = 26/334 (7%)

Query: 7   YPHYLGG---ASPHEIQAAAAAGA-YGA--LHNNLPPSLNAYPRPPLVGYDPHSQMRAPL 60
           YP YL G    +PH++QAAAAA A YG   +HNNLP SLN Y R PL  +DPHSQMRAPL
Sbjct: 331 YPPYLAGPLNGAPHDLQAAAAAAAAYGGPGVHNNLPHSLNNYARAPL-AFDPHSQMRAPL 389

Query: 61  GPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVT 120
           GP    GIPGGKPAYS+HV ++GQMQPVPFP DAL+ PGIPRHARQI++L+HGEVVCAVT
Sbjct: 390 GPI---GIPGGKPAYSFHVNSEGQMQPVPFPQDALLAPGIPRHARQISSLNHGEVVCAVT 446

Query: 121 ISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 180
           ISNPTKYVYTGGKGCVK WDISQPG+K+PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA
Sbjct: 447 ISNPTKYVYTGGKGCVKAWDISQPGNKSPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 506

Query: 181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 240
           SNLSIWDLASPTPRIKAELTS+APACYALAISPDSKVCFSCCSDGNIAVWDL NQTLVRQ
Sbjct: 507 SNLSIWDLASPTPRIKAELTSNAPACYALAISPDSKVCFSCCSDGNIAVWDLQNQTLVRQ 566

Query: 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300
           FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG                 QL    
Sbjct: 567 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG----------------RQLQQHD 610

Query: 301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
             + I S+   P G  L VG E SN+ +     P
Sbjct: 611 FSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKP 644

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|259013506|ref|NP_001158497.1| groucho protein [Saccoglossus kowalevskii] gi|197734699|gb|ACH73245.1| groucho protein [Saccoglossus kowalevskii]

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/304 (75%), Positives = 249/304 (81%), Gaps = 16/304 (5%)

Query: 31  LHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPF 90
           LHN++ P L +Y R P+VG+DPH   R      SL+GIPGGKPAYS+HV+ DGQMQPVPF
Sbjct: 349 LHNSISPGLGSYARSPMVGFDPHLHARGSGLNPSLSGIPGGKPAYSFHVSADGQMQPVPF 408

Query: 91  PPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPV 150
           PPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDISQPG+K+PV
Sbjct: 409 PPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPV 468

Query: 151 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 210
           SQLDCLQRDNYIRSVKLLPDGRTL+VGGEAS LSIWDLA+PTPRIKAELTSSAPACYALA
Sbjct: 469 SQLDCLQRDNYIRSVKLLPDGRTLLVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA 528

Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS+DGTKLWTGGLDNTVR
Sbjct: 529 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISSDGTKLWTGGLDNTVR 588

Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 330
           SWDLREG                 QL      + I S+   P G  L VG E+SN+ +  
Sbjct: 589 SWDLREG----------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH 632

Query: 331 LASP 334
              P
Sbjct: 633 HTKP 636

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|383421187|gb|AFH33807.1| transducin-like enhancer protein 3 isoform c [Macaca mulatta]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/329 (71%), Positives = 258/329 (78%), Gaps = 26/329 (7%)

Query: 15  SPHEIQAAAAA-GAYGALHNNLPPSLNA--------YPRPPLVGYDPHSQMRAPLGPASL 65
           S HE+  +  + GAY +LHN +PP ++A        Y R P+VG+DPH  MRA   P+SL
Sbjct: 363 SHHEMNGSLTSPGAYASLHN-IPPQMSAAAAAAAAAYGRSPMVGFDPHPPMRATGLPSSL 421

Query: 66  AGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPT 125
           A IPGGKPAYS+HV+ DGQMQPVPFP DAL GPGIPRHARQINTLSHGEVVCAVTISNPT
Sbjct: 422 ASIPGGKPAYSFHVSADGQMQPVPFPHDALAGPGIPRHARQINTLSHGEVVCAVTISNPT 481

Query: 126 KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 185
           ++VYTGGKGCVK+WDISQPGSK+P+SQLDCL RDNYIRS KLLPDGRTLIVGGEAS L+I
Sbjct: 482 RHVYTGGKGCVKIWDISQPGSKSPISQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTI 541

Query: 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 245
           WDLASPTPRIKAELTSSAPACYALAISPD+KVCFSCCSDGNIAVWDLHNQTLVRQFQGHT
Sbjct: 542 WDLASPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 601

Query: 246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI 305
           DGASCIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + I
Sbjct: 602 DGASCIDISHDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQI 645

Query: 306 RSVKLLPDGRTLIVGGEASNLSIWDLASP 334
            S+   P G  L VG E+SN+ +     P
Sbjct: 646 FSLGYCPTGEWLAVGMESSNVEVLHHTKP 674

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	504
UNIPROTKB|F1MWR6	774	TLE4 "Uncharacterized protein"	0.551	0.359	0.761	3.3e-118
UNIPROTKB|F1PDW7	774	TLE4 "Uncharacterized protein"	0.551	0.359	0.761	3.3e-118
UNIPROTKB|F1PGE6	711	TLE4 "Uncharacterized protein"	0.551	0.390	0.761	3.3e-118
UNIPROTKB|F1SIJ8	777	TLE4 "Uncharacterized protein"	0.551	0.357	0.761	3.3e-118
UNIPROTKB|B3KQ29	410	TLE4 "Transducin-like enhancer	0.551	0.678	0.758	8.8e-118
UNIPROTKB|F8W6T6	748	TLE4 "cDNA FLJ58005" [Homo sap	0.551	0.371	0.758	8.8e-118
UNIPROTKB|F8W9R0	805	TLE4 "Transducin-like enhancer	0.551	0.345	0.758	8.8e-118
UNIPROTKB|G8JLG4	704	TLE4 "Transducin-like enhancer	0.551	0.394	0.758	8.8e-118
UNIPROTKB|Q04727	773	TLE4 "Transducin-like enhancer	0.551	0.359	0.758	8.8e-118
MGI|MGI:104633	773	Tle4 "transducin-like enhancer	0.551	0.359	0.758	8.8e-118

UNIPROTKB|F1MWR6 TLE4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 224/294 (76%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HVT DGQMQPVPFPPDALIGPGI
Sbjct:   416 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGI 475

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   476 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 535

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   536 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 595

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   596 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 652

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   653 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 693

GO:0070491 "repressing transcription factor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PDW7 TLE4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 224/294 (76%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HVT DGQMQPVPFPPDALIGPGI
Sbjct:   416 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGI 475

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   476 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 535

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   536 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 595

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   596 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 652

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   653 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 693

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PGE6 TLE4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 224/294 (76%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HVT DGQMQPVPFPPDALIGPGI
Sbjct:   353 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGI 412

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   413 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 472

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   473 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 532

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   533 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 589

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   590 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 630

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1SIJ8 TLE4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 224/294 (76%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HVT DGQMQPVPFPPDALIGPGI
Sbjct:   419 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGI 478

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   479 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 538

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   539 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 598

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   599 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 655

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   656 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 696

GO:0070491 "repressing transcription factor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|B3KQ29 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:    52 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 111

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   112 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 171

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   172 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 231

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   232 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 288

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   289 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 329

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0070491 "repressing transcription factor binding" evidence=IEA

UNIPROTKB|F8W6T6 TLE4 "cDNA FLJ58005" [Homo sapiens (taxid:9606)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:   390 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 449

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   450 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 509

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   510 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 569

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   570 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 626

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   627 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 667

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F8W9R0 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:   447 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 506

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   507 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 566

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   567 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 626

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   627 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 683

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   684 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 724

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|G8JLG4 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:   346 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 405

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   406 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 465

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   466 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 525

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   526 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 582

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   583 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 623

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q04727 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:   415 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 474

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   475 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 534

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   535 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 594

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   595 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 651

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   652 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 692

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0070491 "repressing transcription factor binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005654 "nucleoplasm" evidence=TAS

GO:0007219 "Notch signaling pathway" evidence=TAS

MGI|MGI:104633 Tle4 "transducin-like enhancer of split 4, homolog of Drosophila E(spl)" [Mus musculus (taxid:10090)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/294 (75%), Positives = 240/294 (81%)

Query:    41 AYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI 100
             AY R P+VG+DPH  MR P  P +L GIPGGKPAYS+HV+ DGQMQPVPFPPDALIGPGI
Sbjct:   415 AYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI 474

Query:   101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
             PRHARQINTL+HGEVVCAVTISNPT++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDN
Sbjct:   475 PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN 534

Query:   161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
             YIRS +LLPDGRTLIVGGEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFS
Sbjct:   535 YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 594

Query:   221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
             CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLREG   
Sbjct:   595 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--- 651

Query:   281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
                           QL      + I S+   P G  L VG E SN+ +  +  P
Sbjct:   652 -------------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKP 692

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IGI

GO:0003714 "transcription corepressor activity" evidence=IGI;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IC

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0070491 "repressing transcription factor binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q04727	TLE4_HUMAN	No assigned EC number	0.7046	0.5912	0.3855	yes	N/A
P16371	GROU_DROME	No assigned EC number	0.7257	0.5595	0.3863	yes	N/A
Q08122	TLE3_MOUSE	No assigned EC number	0.6802	0.6210	0.4054	yes	N/A
Q9JIT3	TLE3_RAT	No assigned EC number	0.7051	0.6011	0.3965	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	504
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-51
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-39
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-35
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-32
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-32
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-31
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-27
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-23
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-07
smart00320	40	smart00320, WD40, WD40 repeats	2e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-06
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	8e-05
COG5276	370	COG5276, COG5276, Uncharacterized conserved protei	1e-04
smart00320	40	smart00320, WD40, WD40 repeats	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.003

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  176 bits (449), Expect = 1e-51
 Identities = 90/300 (30%), Positives = 128/300 (42%), Gaps = 28/300 (9%)

Query: 206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL 265
              +A SPD K+  +   DG I VWDL    L+R  +GHT     +  SADGT L +G  
Sbjct: 12  VTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS 71

Query: 266 DNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 324
           D T+R WDL  G CV+                      +Y+ SV   PDGR L       
Sbjct: 72  DKTIRLWDLETGECVRTL----------------TGHTSYVSSVAFSPDGRILSSSSRDK 115

Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            + +WD+   T +    L        ++A SPD    F +S      +K+WD+    +  
Sbjct: 116 TIKVWDV--ETGKCLTTLRGHTDWVNSVAFSPDGT--FVASSSQDGTIKLWDLR---TGK 168

Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 444
            V+ L        + SV   PDG  L+       + +WDL+  T +    L        +
Sbjct: 169 CVATLT--GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--TGKCLGTLRGHENGVNS 224

Query: 445 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           +A SPD  +  S   DG I VWDL     V+   GHT+  + +  S DG +L +G  D T
Sbjct: 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGT 284

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  143 bits (363), Expect = 4e-39
 Identities = 87/310 (28%), Positives = 124/310 (40%), Gaps = 32/310 (10%)

Query: 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF 219
             +  V   PDG+ L  G     + +WDL   T  +   L         +A S D     
Sbjct: 10  GGVTCVAFSPDGKLLATGSGDGTIKVWDLE--TGELLRTLKGHTGPVRDVAASADGTYLA 67

Query: 220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-C 278
           S  SD  I +WDL     VR   GHT   S +  S DG  L +   D T++ WD+  G C
Sbjct: 68  SGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC 127

Query: 279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 338
           +                       +++ SV   PDG  +    +   + +WDL   T + 
Sbjct: 128 LTTLR----------------GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR--TGKC 169

Query: 339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-DNY 397
            A LT       ++A SPD +    SS      +K+WD+S          L  L+  +N 
Sbjct: 170 VATLTGHTGEVNSVAFSPDGEKLLSSSS--DGTIKLWDLSTG------KCLGTLRGHENG 221

Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 457
           + SV   PDG  L  G E   + +WDL   T      L+    +  +LA SPD K   S 
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLR--TGECVQTLSGHTNSVTSLAWSPDGKRLASG 279

Query: 458 CSDGNIAVWD 467
            +DG I +WD
Sbjct: 280 SADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  136 bits (343), Expect = 4e-35
 Identities = 106/406 (26%), Positives = 177/406 (43%), Gaps = 33/406 (8%)

Query: 105 RQINTLSHGEVVCAVTISNPTKYVYTGGKGC-VKVWDISQPGSKTPVSQLDCLQRDNYIR 163
             +    H + + ++  S   + + +G     +K+WD+     +  +  L+ L   +  +
Sbjct: 57  SSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLD--NGEKLIKSLEGLHDSSVSK 114

Query: 164 SVKLLPDGRTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
                PDG ++++   +    + +WDL++P   I+     S     +LA SPD K+  S 
Sbjct: 115 LALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSES-VTSLAFSPDGKLLASG 173

Query: 222 CS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWTGGLDNTVRSWDLREGCV 279
            S DG I +WDL     +    GHTD  S +  S DG   + +G  D T+R WDL  G +
Sbjct: 174 SSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKL 233

Query: 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339
               +S   S + VS                 PDG  L  G     + +WDL S +  ++
Sbjct: 234 LRSTLSGH-SDSVVSSFS--------------PDGSLLASGSSDGTIRLWDLRSSSSLLR 278

Query: 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR 399
                S+    ++A SPD K    S     + V++WD+    +   +S L     +  + 
Sbjct: 279 TLSGHSSSVL-SVAFSPDGKL-LASGSSDGT-VRLWDLE---TGKLLSSLTLKGHEGPVS 332

Query: 400 SVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
           S+   PDG  L+ GG     + +WDL +       +         +++ SPD +V  S  
Sbjct: 333 SLSFSPDGSLLVSGGSDDGTIRLWDLRT---GKPLKTLEGHSNVLSVSFSPDGRVVSSGS 389

Query: 459 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           +DG + +WDL   +L+R   GHT   + +D S DG  L +G  DNT
Sbjct: 390 TDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNT 435

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  124 bits (313), Expect = 3e-32
 Identities = 77/268 (28%), Positives = 110/268 (41%), Gaps = 26/268 (9%)

Query: 237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQL 296
           L R  +GHT G +C+  S DG  L TG  D T++ WDL  G +          +T     
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL---------RTLKGHT 51

Query: 297 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP 356
                   +R V    DG  L  G     + +WDL   T      LT       ++A SP
Sbjct: 52  GP------VRDVAASADGTYLASGSSDKTIRLWDL--ETGECVRTLTGHTSYVSSVAFSP 103

Query: 357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416
           D +    SS      +KVWD+      T           +++ SV   PDG  +    + 
Sbjct: 104 DGR--ILSSSSRDKTIKVWDVETGKCLT-----TLRGHTDWVNSVAFSPDGTFVASSSQD 156

Query: 417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 476
             + +WDL   T +  A LT       ++A SPD +   S  SDG I +WDL     +  
Sbjct: 157 GTIKLWDLR--TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGT 214

Query: 477 FQGHTDGASCIDISADGTKLWTGGLDNT 504
            +GH +G + +  S DG  L +G  D T
Sbjct: 215 LRGHENGVNSVAFSPDGYLLASGSEDGT 242

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  127 bits (320), Expect = 5e-32
 Identities = 99/374 (26%), Positives = 144/374 (38%), Gaps = 37/374 (9%)

Query: 111 SHGEVVCAVTISNPTKYVY----TGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 166
            H   V  + +S+P         +   G VK+WD+S PG      +         + S+ 
Sbjct: 107 LHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGH----SESVTSLA 162

Query: 167 LLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-D 224
             PDG+ L  G      + +WDL +  P   + L        +LA SPD  +  +  S D
Sbjct: 163 FSPDGKLLASGSSLDGTIKLWDLRTGKP--LSTLAGHTDPVSSLAFSPDGGLLIASGSSD 220

Query: 225 GNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD 283
           G I +WDL    L+R    GH+D       S DG+ L +G  D T+R WDLR     +  
Sbjct: 221 GTIRLWDLSTGKLLRSTLSGHSDS-VVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRT 279

Query: 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343
           +S   S               + SV   PDG+ L  G     + +WDL +        L 
Sbjct: 280 LSGHSSS--------------VLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLK 325

Query: 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 403
                  +L+ SPD      S       +++WD+           L  L+  + + SV  
Sbjct: 326 GHEGPVSSLSFSPDGSL-LVSGGSDDGTIRLWDLRT------GKPLKTLEGHSNVLSVSF 378

Query: 404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 463
            PDGR +  G     + +WDL   T  +   L        +L  SPD K   S  SD  I
Sbjct: 379 SPDGRVVSSGSTDGTVRLWDL--STGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTI 436

Query: 464 AVWDLHNQTLVRQF 477
            +WDL        F
Sbjct: 437 RLWDLKTSLKSVSF 450

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  126 bits (317), Expect = 1e-31
 Identities = 93/363 (25%), Positives = 147/363 (40%), Gaps = 31/363 (8%)

Query: 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELTSSAPACY 207
            +S L     ++ I S+   PDG  L+ G     + +WDL +    IK+ E    +    
Sbjct: 55  DLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSK 114

Query: 208 ALAISPDSKVCFSCCS--DGNIAVWDLHNQT-LVRQFQGHTDGASCIDISADGTKLWTGG 264
               SPD        S  DG + +WDL     L+R  +GH++  + +  S DG  L +G 
Sbjct: 115 LALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS 174

Query: 265 -LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 323
            LD T++ WDLR G              P+S L      + + S+   PDG  LI  G +
Sbjct: 175 SLDGTIKLWDLRTG-------------KPLSTLAG--HTDPVSSLAFSPDGGLLIASGSS 219

Query: 324 SN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS 382
              + +WDL   T ++     S        + SPD      +S      +++WD+    S
Sbjct: 220 DGTIRLWDL--STGKLLRSTLSGHSDSVVSSFSPDGS--LLASGSSDGTIRLWDLRSSSS 275

Query: 383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 442
                        + + SV   PDG+ L  G     + +WDL +        L       
Sbjct: 276 LLRTLSGH----SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPV 331

Query: 443 YALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL 501
            +L+ SPD S +      DG I +WDL     ++  +GH++    +  S DG  + +G  
Sbjct: 332 SSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGST 390

Query: 502 DNT 504
           D T
Sbjct: 391 DGT 393

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  110 bits (277), Expect = 3e-27
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 8/163 (4%)

Query: 112 HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
           H + V +V  S    +V +  + G +K+WD+    +   V+ L        + SV   PD
Sbjct: 134 HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR---TGKCVATLT--GHTGEVNSVAFSPD 188

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
           G  L+       + +WDL+  T +    L        ++A SPD  +  S   DG I VW
Sbjct: 189 GEKLLSSSSDGTIKLWDLS--TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246

Query: 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
           DL     V+   GHT+  + +  S DG +L +G  D T+R WD
Sbjct: 247 DLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  100 bits (250), Expect = 1e-23
 Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 23/220 (10%)

Query: 112 HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
           H   V +V  S   + + +  +   +KVWD+      T           +++ SV   PD
Sbjct: 92  HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLT-----TLRGHTDWVNSVAFSPD 146

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
           G  +    +   + +WDL   T +  A LT       ++A SPD +   S  SDG I +W
Sbjct: 147 GTFVASSSQDGTIKLWDLR--TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLW 204

Query: 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK 290
           DL     +   +GH +G + +  S DG  L +G  D T+R WDLR             + 
Sbjct: 205 DLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR-------------TG 251

Query: 291 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 330
             V  L      N + S+   PDG+ L  G     + IWD
Sbjct: 252 ECVQTLSGHT--NSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 35/143 (24%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGK--GCVKVWDISQPGSKTPVSQLDCLQR 158
            +    +    H   V +++ S     + +GG   G +++WD+           L  L+ 
Sbjct: 316 GKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT------GKPLKTLEG 369

Query: 159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC 218
            + + SV   PDGR +  G     + +WDL   T  +   L        +L  SPD K  
Sbjct: 370 HSNVLSVSFSPDGRVVSSGSTDGTVRLWDL--STGSLLRNLDGHTSRVTSLDFSPDGKSL 427

Query: 219 FSCCSDGNIAVWDLHNQTLVRQF 241
            S  SD  I +WDL        F
Sbjct: 428 ASGSSDNTIRLWDLKTSLKSVSF 450

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
           +  L++  +GHT   + +  S DG  L +G  D T++ WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
            L+R  +GHT   + +  S DG  L +G  D TVR WD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 45.1 bits (106), Expect = 8e-05
 Identities = 77/359 (21%), Positives = 133/359 (37%), Gaps = 46/359 (12%)

Query: 133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 192
           +G  K    S+   K  + Q D L   N + ++    DG      G    + I++  S  
Sbjct: 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESI- 515

Query: 193 PRIKAELTSSAPACYALAISPDSKVCF---------SCCSDGNIAVWDLHNQTLVRQFQG 243
             IK       P     + S  S +C+         S   +G + VWD+    LV + + 
Sbjct: 516 --IKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKE 573

Query: 244 HTDGASCIDI-SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302
           H      ID  SAD T L +G  D +V+ W + +G          G+    + + C+Q  
Sbjct: 574 HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-------SIGTIKTKANICCVQFP 626

Query: 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF 362
           +          GR+L  G     +  +DL +P   +   +  S    Y   +  DS +  
Sbjct: 627 S--------ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLV 676

Query: 363 FSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEASNLSI 421
            SS    + +K+WD+S   S    + L        +++ V L      +  G E + + +
Sbjct: 677 SSS--TDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV 734

Query: 422 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC------------SDGNIAVWDL 468
           +  A P P +  +  +  P    L +   S+   S C            S GNI + ++
Sbjct: 735 YHKAFPMPVLSYKFKTIDPVS-GLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792

Length = 793

>gnl|CDD|227601 COG5276, COG5276, Uncharacterized conserved protein [Function unknown]

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PR 337
           +++ DIS P S T +  L+    D Y   V +   G    V        I D++ P+ P+
Sbjct: 108 LRIVDISTPDSPTLIGFLNT---DGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQ 162

Query: 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSC----VKVWDISQPGSKTPVSQLDCLQ 393
           +           + +AIS +          Y +     + + D+S P S   +   +   
Sbjct: 163 LAGRYALPGGDTHDVAISGNYA--------YVAWRDGGLTIVDVSNPHSPVLIGSYNT-- 212

Query: 394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDS 451
                 SV +  +   L+V  E   + I D++ P+ P +     +S P   +       
Sbjct: 213 -GPGTYSVSVSDNRAYLVVYDEG--VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGE 268

Length = 370

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 470 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           +  L++  +GHT   + +  S DG  L +G  D T
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGT 35

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231
           +  +   L        ++A SPD K   S   DG I +WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 428 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 467
           +  +   L        ++A SPD K   S   DG I +WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 205 ACYALAISPDSKVCFSCCSDGNIAVWD 231
              ++A SPD  +  S   DG + VWD
Sbjct: 13  PVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 441 ACYALAISPDSKVCFSCCSDGNIAVWD 467
              ++A SPD  +  S   DG + VWD
Sbjct: 13  PVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 472 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
            L+R  +GHT   + +  S DG  L +G  D T
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGT 34

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	504
KOG0271|consensus	480		100.0
KOG0639|consensus	705		100.0
KOG0271|consensus	480		100.0
KOG0319|consensus	775		100.0
KOG0318|consensus	603		100.0
KOG0291|consensus	893		100.0
KOG0318|consensus	603		100.0
KOG0272|consensus	459		100.0
KOG0319|consensus	775		100.0
KOG0291|consensus	893		100.0
KOG0272|consensus	459		100.0
KOG0315|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0306|consensus	888		100.0
KOG0296|consensus	399		100.0
KOG0279|consensus	315		100.0
KOG0286|consensus	343		100.0
KOG0306|consensus	888		100.0
KOG0273|consensus	524		100.0
KOG0279|consensus	315		100.0
KOG0645|consensus	312		100.0
KOG0265|consensus	338		100.0
KOG0295|consensus	406		100.0
KOG0315|consensus	311		100.0
KOG0284|consensus	464		100.0
KOG0285|consensus	460		100.0
KOG0296|consensus	399		100.0
KOG0273|consensus	524		100.0
KOG1063|consensus	764		100.0
KOG0645|consensus	312		100.0
KOG0284|consensus	464		100.0
KOG1408|consensus	1080		100.0
KOG0282|consensus	503		100.0
KOG0265|consensus	338		100.0
KOG0263|consensus	707		100.0
KOG0293|consensus	519		100.0
KOG0285|consensus	460		100.0
KOG0263|consensus	707		100.0
KOG0316|consensus	307		100.0
KOG0282|consensus	503		100.0
KOG0276|consensus	794		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0293|consensus	519		100.0
KOG0266|consensus	456		100.0
KOG0266|consensus	456		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0292|consensus	1202		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG1539|consensus	910		100.0
KOG0276|consensus	794		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0277|consensus	311		100.0
KOG1408|consensus	1080		100.0
KOG1407|consensus	313		100.0
KOG0275|consensus	508		100.0
KOG0295|consensus	406		100.0
KOG0278|consensus	334		100.0
KOG0292|consensus	1202		100.0
KOG0313|consensus	423		100.0
KOG0313|consensus	423		100.0
KOG0316|consensus	307		100.0
KOG0281|consensus	499		100.0
KOG0643|consensus	327		100.0
KOG0278|consensus	334		100.0
KOG0277|consensus	311		100.0
KOG0281|consensus	499		100.0
KOG0275|consensus	508		100.0
KOG2106|consensus	626		100.0
KOG0288|consensus	459		100.0
KOG1446|consensus	311		100.0
KOG0643|consensus	327		100.0
KOG0283|consensus	712		100.0
KOG2048|consensus	691		100.0
KOG2106|consensus	626		100.0
KOG0772|consensus	641		100.0
KOG0640|consensus	430		100.0
KOG0640|consensus	430		100.0
KOG1063|consensus	764		100.0
KOG1446|consensus	311		100.0
KOG0310|consensus	487		100.0
KOG0973|consensus	942		100.0
KOG0647|consensus	347		100.0
KOG1539|consensus	910		100.0
KOG0647|consensus	347		100.0
KOG0641|consensus	350		100.0
KOG0973|consensus	942		100.0
KOG0305|consensus	484		100.0
KOG0299|consensus	479		100.0
KOG0283|consensus	712		100.0
KOG0310|consensus	487		99.98
KOG1407|consensus	313		99.98
KOG0305|consensus	484		99.98
KOG0288|consensus	459		99.98
PTZ00421	493	coronin; Provisional	99.98
KOG0289|consensus	506		99.98
KOG0299|consensus	479		99.97
KOG0289|consensus	506		99.97
KOG0268|consensus	433		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0772|consensus	641		99.97
KOG0308|consensus	735		99.97
KOG1036|consensus	323		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0294|consensus	362		99.97
KOG0268|consensus	433		99.97
KOG0274|consensus	537		99.97
KOG0300|consensus	481		99.97
KOG1036|consensus	323		99.97
KOG1445|consensus	1012		99.97
KOG2096|consensus	420		99.97
KOG2096|consensus	420		99.97
KOG0274|consensus	537		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0641|consensus	350		99.97
KOG0300|consensus	481		99.97
KOG2048|consensus	691		99.97
KOG1332|consensus	299		99.96
KOG2055|consensus	514		99.96
KOG0294|consensus	362		99.96
KOG0264|consensus	422		99.96
KOG0646|consensus	476		99.96
KOG1332|consensus	299		99.96
KOG0308|consensus	735		99.96
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.96
KOG0301|consensus	745		99.96
KOG4283|consensus	397		99.96
KOG4283|consensus	397		99.96
KOG0264|consensus	422		99.96
KOG2055|consensus	514		99.96
KOG0301|consensus	745		99.96
KOG1273|consensus	405		99.96
KOG0639|consensus	705		99.96
KOG1274|consensus	933		99.95
KOG1274|consensus	933		99.95
KOG0269|consensus	839		99.95
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.95
KOG0269|consensus	839		99.95
KOG1034|consensus	385		99.95
KOG1445|consensus	1012		99.95
KOG4328|consensus	498		99.95
KOG0321|consensus	720		99.95
KOG1009|consensus	434		99.94
KOG4328|consensus	498		99.94
KOG4378|consensus	673		99.94
KOG1273|consensus	405		99.94
KOG1009|consensus	434		99.94
KOG0646|consensus	476		99.94
KOG2445|consensus	361		99.93
KOG0650|consensus	733		99.93
KOG0267|consensus	825		99.93
KOG0650|consensus	733		99.93
KOG0321|consensus	720		99.93
KOG2445|consensus	361		99.93
COG2319	466	FOG: WD40 repeat [General function prediction only	99.93
KOG0270|consensus	463		99.93
KOG4378|consensus	673		99.93
KOG2919|consensus	406		99.92
KOG0267|consensus	825		99.92
KOG2919|consensus	406		99.92
KOG1538|consensus	1081		99.92
KOG0302|consensus	440		99.92
KOG0302|consensus	440		99.92
KOG1963|consensus	792		99.91
KOG1034|consensus	385		99.91
KOG1538|consensus	1081		99.91
COG2319	466	FOG: WD40 repeat [General function prediction only	99.91
KOG0307|consensus	1049		99.91
KOG0307|consensus	1049		99.9
KOG0270|consensus	463		99.9
KOG4227|consensus	609		99.89
KOG0290|consensus	364		99.89
KOG1963|consensus	792		99.89
KOG1188|consensus	376		99.89
KOG4497|consensus	447		99.89
PRK11028	330	6-phosphogluconolactonase; Provisional	99.89
KOG0322|consensus	323		99.88
KOG0303|consensus	472		99.88
KOG1188|consensus	376		99.88
PRK11028	330	6-phosphogluconolactonase; Provisional	99.87
KOG4227|consensus	609		99.87
KOG0642|consensus	577		99.87
KOG4497|consensus	447		99.87
KOG1523|consensus	361		99.87
KOG1007|consensus	370		99.86
KOG0771|consensus	398		99.86
KOG0322|consensus	323		99.86
KOG0649|consensus	325		99.86
KOG1007|consensus	370		99.85
KOG1587|consensus	555		99.85
KOG0303|consensus	472		99.84
KOG0642|consensus	577		99.84
KOG1524|consensus	737		99.83
KOG0644|consensus	1113		99.83
KOG1310|consensus	758		99.83
KOG0290|consensus	364		99.83
KOG1587|consensus	555		99.83
KOG1524|consensus	737		99.82
KOG1517|consensus	1387		99.82
PRK01742	429	tolB translocation protein TolB; Provisional	99.82
KOG0771|consensus	398		99.81
KOG0644|consensus	1113		99.81
KOG1517|consensus	1387		99.81
KOG0649|consensus	325		99.81
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.81
KOG1334|consensus	559		99.8
KOG2139|consensus	445		99.8
KOG2111|consensus	346		99.8
KOG1523|consensus	361		99.8
KOG2110|consensus	391		99.79
KOG1240|consensus	1431		99.79
KOG2110|consensus	391		99.79
PRK01742	429	tolB translocation protein TolB; Provisional	99.78
PRK03629	429	tolB translocation protein TolB; Provisional	99.78
KOG2315|consensus	566		99.78
KOG1334|consensus	559		99.78
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.77
KOG2139|consensus	445		99.76
KOG2111|consensus	346		99.75
KOG1310|consensus	758		99.74
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.74
KOG2394|consensus	636		99.73
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.73
PRK04922	433	tolB translocation protein TolB; Provisional	99.73
KOG1272|consensus	545		99.73
PRK02889	427	tolB translocation protein TolB; Provisional	99.72
KOG2321|consensus	703		99.72
PRK05137	435	tolB translocation protein TolB; Provisional	99.71
KOG1240|consensus	1431		99.71
PRK03629	429	tolB translocation protein TolB; Provisional	99.71
KOG2394|consensus	636		99.7
KOG2315|consensus	566		99.7
PRK05137	435	tolB translocation protein TolB; Provisional	99.69
KOG3881|consensus	412		99.69
KOG1272|consensus	545		99.68
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.68
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.67
PRK02889	427	tolB translocation protein TolB; Provisional	99.67
PRK04922	433	tolB translocation protein TolB; Provisional	99.66
KOG2321|consensus	703		99.65
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.65
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.64
KOG2314|consensus	698		99.64
KOG2314|consensus	698		99.64
KOG0974|consensus	967		99.64
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.64
PRK00178	430	tolB translocation protein TolB; Provisional	99.63
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.62
KOG1354|consensus	433		99.62
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.62
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.61
PRK04792	448	tolB translocation protein TolB; Provisional	99.61
KOG1409|consensus	404		99.61
KOG1409|consensus	404		99.6
KOG1912|consensus	1062		99.59
KOG3881|consensus	412		99.59
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.58
KOG1354|consensus	433		99.58
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.57
KOG0974|consensus	967		99.57
PRK01029	428	tolB translocation protein TolB; Provisional	99.55
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.54
PRK00178	430	tolB translocation protein TolB; Provisional	99.54
KOG4547|consensus	541		99.54
KOG2041|consensus	1189		99.54
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.53
PRK01029	428	tolB translocation protein TolB; Provisional	99.53
PRK04792	448	tolB translocation protein TolB; Provisional	99.52
COG4946	668	Uncharacterized protein related to the periplasmic	99.52
COG4946	668	Uncharacterized protein related to the periplasmic	99.51
KOG4547|consensus	541		99.51
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.5
KOG0280|consensus	339		99.5
KOG1912|consensus	1062		99.47
KOG2041|consensus	1189		99.47
KOG0280|consensus	339		99.45
KOG4532|consensus	344		99.41
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.4
KOG1064|consensus	2439		99.35
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.35
KOG4190|consensus	1034		99.33
KOG0309|consensus	1081		99.31
PRK04043	419	tolB translocation protein TolB; Provisional	99.29
PRK04043	419	tolB translocation protein TolB; Provisional	99.27
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.27
KOG0309|consensus	1081		99.27
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.27
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.27
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.26
KOG4532|consensus	344		99.25
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.24
KOG1064|consensus	2439		99.23
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.18
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.17
KOG3914|consensus	390		99.16
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.16
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.16
KOG4190|consensus	1034		99.15
KOG4714|consensus	319		99.14
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.13
KOG0882|consensus	558		99.09
KOG0882|consensus	558		99.08
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.06
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	99.04
KOG4714|consensus	319		99.02
KOG3914|consensus	390		99.01
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.01
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.97
KOG1920|consensus	1265		98.94
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.91
KOG3617|consensus	1416		98.89
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.86
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.85
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.84
KOG1832|consensus	1516		98.83
KOG2114|consensus	933		98.81
KOG1645|consensus	463		98.81
KOG2695|consensus	425		98.81
KOG4649|consensus	354		98.8
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.8
KOG2695|consensus	425		98.78
KOG1920|consensus	1265		98.78
KOG1275|consensus	1118		98.77
PRK02888	635	nitrous-oxide reductase; Validated	98.77
KOG1832|consensus	1516		98.76
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.71
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.69
KOG1008|consensus	783		98.68
KOG3621|consensus	726		98.66
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.66
PRK02888	635	nitrous-oxide reductase; Validated	98.64
KOG1645|consensus	463		98.63
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.61
KOG2066|consensus	846		98.61
KOG2066|consensus	846		98.6
KOG2114|consensus	933		98.58
COG3391	381	Uncharacterized conserved protein [Function unknow	98.57
KOG4649|consensus	354		98.55
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.53
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.53
KOG3621|consensus	726		98.51
KOG1897|consensus	1096		98.5
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.49
KOG1275|consensus	1118		98.48
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.45
KOG1008|consensus	783		98.45
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.43
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.41
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.4
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.39
KOG3617|consensus	1416		98.38
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.32
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.31
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.29
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.23
KOG1897|consensus	1096		98.2
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.2
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.2
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.16
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	98.12
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.11
COG3391	381	Uncharacterized conserved protein [Function unknow	98.1
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.08
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	98.03
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.01
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.01
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.99
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.95
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.94
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.9
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.87
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.86
KOG4640|consensus	665		97.85
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.82
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.8
PRK13616	591	lipoprotein LpqB; Provisional	97.8
KOG4640|consensus	665		97.76
PRK13616	591	lipoprotein LpqB; Provisional	97.75
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.73
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.73
KOG4499|consensus	310		97.73
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.72
COG5276	370	Uncharacterized conserved protein [Function unknow	97.67
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.64
KOG4441|consensus	571		97.64
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.63
KOG2444|consensus	238		97.63
PHA02713	557	hypothetical protein; Provisional	97.62
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.55
KOG4441|consensus	571		97.55
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.52
PHA02713	557	hypothetical protein; Provisional	97.52
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.42
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	97.42
PRK10115	686	protease 2; Provisional	97.4
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.39
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.39
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.33
KOG2079|consensus	1206		97.31
KOG2395|consensus	644		97.29
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.24
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.2
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.14
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.12
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.12
KOG2079|consensus	1206		97.08
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	97.05
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.02
COG5276	370	Uncharacterized conserved protein [Function unknow	96.98
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.97
PHA03098	534	kelch-like protein; Provisional	96.93
KOG2395|consensus	644		96.93
PHA03098	534	kelch-like protein; Provisional	96.92
KOG2377|consensus	657		96.86
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.86
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.84
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	96.82
PRK10115	686	protease 2; Provisional	96.82
KOG2280|consensus	829		96.81
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.8
KOG1898|consensus	1205		96.78
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.76
KOG4499|consensus	310		96.62
PHA02790	480	Kelch-like protein; Provisional	96.57
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	96.5
PLN00033	398	photosystem II stability/assembly factor; Provisio	96.49
PRK13684	334	Ycf48-like protein; Provisional	96.43
KOG3630|consensus	1405		96.33
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.32
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.28
KOG2444|consensus	238		96.26
COG4590	733	ABC-type uncharacterized transport system, permeas	96.2
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.16
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.1
KOG3630|consensus	1405		96.04
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.98
COG4590	733	ABC-type uncharacterized transport system, permeas	95.9
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	95.76
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.71
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.7
KOG2247|consensus	615		95.6
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	95.59
PLN02193	470	nitrile-specifier protein	95.55
PHA02790	480	Kelch-like protein; Provisional	95.51
PF13449	326	Phytase-like: Esterase-like activity of phytase	95.48
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	95.43
PLN02153	341	epithiospecifier protein	95.42
PLN02153	341	epithiospecifier protein	95.37
KOG2377|consensus	657		95.35
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	95.33
KOG1916|consensus	1283		95.32
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	95.22
KOG0918|consensus	476		95.16
PRK13684	334	Ycf48-like protein; Provisional	95.01
KOG1900|consensus	1311		95.01
COG3292	671	Predicted periplasmic ligand-binding sensor domain	94.94
COG5167	776	VID27 Protein involved in vacuole import and degra	94.88
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	94.77
PLN02193	470	nitrile-specifier protein	94.77
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.74
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	94.61
PF13449	326	Phytase-like: Esterase-like activity of phytase	94.55
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.52
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	94.51
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.45
PLN00033	398	photosystem II stability/assembly factor; Provisio	94.4
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.35
KOG1983|consensus	993		94.27
KOG2247|consensus	615		94.24
KOG3616|consensus	1636		94.12
KOG2280|consensus	829		93.99
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.99
COG5167	776	VID27 Protein involved in vacuole import and degra	93.71
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	93.7
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.59
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	93.58
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	93.45
KOG4460|consensus	741		93.39
PRK13613	599	lipoprotein LpqB; Provisional	93.23
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	93.23
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.11
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.03
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	92.91
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	92.83
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.15
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	92.01
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	91.86
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	91.73
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	91.45
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	91.05
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	91.02
KOG1916|consensus	1283		91.02
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	90.9
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	90.85
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	90.74
COG3292	671	Predicted periplasmic ligand-binding sensor domain	90.73
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	90.62
PF12768	281	Rax2: Cortical protein marker for cell polarity	90.54
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.19
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	89.97
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	89.88

>KOG0271|consensus

Probab=100.00  E-value=7.2e-58  Score=382.97  Aligned_cols=357  Identities=24%  Similarity=0.427  Sum_probs=293.1

Q ss_pred             eee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        108 NTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       108 ~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      ..+ ||.++|.|+.|+|+|..|++|+ |.++++||+.+.   .+.  ..+.+|...|.|++|+|||+.||+|+.||+|++
T Consensus       109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te---Tp~--~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~l  183 (480)
T KOG0271|consen  109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE---TPL--FTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRL  183 (480)
T ss_pred             cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC---Ccc--eeecCCccEEEEEEECCCcchhhccccCCeEEE
Confidence            344 8999999999999999999999 999999999874   333  344599999999999999999999999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECC-----CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      ||.++++.. ...+.+|...|++++|.|     ..++|++++.||.|+|||+..++++..+.+|+.+|+|+.|--+| +|
T Consensus       184 wdpktg~~~-g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-li  261 (480)
T KOG0271|consen  184 WDPKTGQQI-GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LI  261 (480)
T ss_pred             ecCCCCCcc-cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eE
Confidence            999987753 667899999999999976     56799999999999999999999999999999999999998766 99


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-Cccce
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-TPRIK  339 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~  339 (504)
                      ++++.|++|++|+...|.+               .....+|...|+.++.+.+- .|=+|..|.+=+-....+. +....
T Consensus       262 ySgS~DrtIkvw~a~dG~~---------------~r~lkGHahwvN~lalsTdy-~LRtgaf~~t~~~~~~~se~~~~Al  325 (480)
T KOG0271|consen  262 YSGSQDRTIKVWRALDGKL---------------CRELKGHAHWVNHLALSTDY-VLRTGAFDHTGRKPKSFSEEQKKAL  325 (480)
T ss_pred             EecCCCceEEEEEccchhH---------------HHhhcccchheeeeeccchh-hhhccccccccccCCChHHHHHHHH
Confidence            9999999999999998875               45567888999999988652 1223332221110000000 00000


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      ...         -+..+++. ..+++++.|.++.+|+-.....    ...+...|...|+.+.||||++++|+++-|..|
T Consensus       326 ~rY---------~~~~~~~~-erlVSgsDd~tlflW~p~~~kk----pi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSV  391 (480)
T KOG0271|consen  326 ERY---------EAVLKDSG-ERLVSGSDDFTLFLWNPFKSKK----PITRMTGHQALVNHVSFSPDGRYIASASFDKSV  391 (480)
T ss_pred             HHH---------HHhhccCc-ceeEEecCCceEEEeccccccc----chhhhhchhhheeeEEECCCccEEEEeecccce
Confidence            000         01111222 1799999999999998654321    122345788999999999999999999999999


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      ++||-++++  ....+.+|...|+.++|+.|.++|++|+.|.++++||+++.++...+.+|.+.|.+++|+|||..+++|
T Consensus       392 kLW~g~tGk--~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sg  469 (480)
T KOG0271|consen  392 KLWDGRTGK--FLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASG  469 (480)
T ss_pred             eeeeCCCcc--hhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecC
Confidence            999999885  456678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCC
Q psy17188        500 GLDN  503 (504)
Q Consensus       500 s~Dg  503 (504)
                      +.|+
T Consensus       470 gkdk  473 (480)
T KOG0271|consen  470 GKDK  473 (480)
T ss_pred             CCce
Confidence            9986

>KOG0639|consensus

Probab=100.00  E-value=3.7e-52  Score=360.60  Aligned_cols=383  Identities=62%  Similarity=1.011  Sum_probs=350.6

Q ss_pred             cccCCCCCCCCCCchhhh-hcccCCccccccCCCCCCCCCCCCCCccccCCCcCcccCCCCCccCCCCCCCcceEEEECC
Q psy17188          3 RRTQYPHYLGGASPHEIQ-AAAAAGAYGALHNNLPPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTT   81 (504)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~s~   81 (504)
                      -++|||.+|+++.|.+++ .++.++           ...+|||+|++.|+|+.++|++..+ .+..+++++.-|.+.++.
T Consensus       320 ~s~p~p~~~~~~p~~~~~g~~tspg-----------~~~~~~~~~~~~~dphp~~R~s~~~-~~~~i~ggkpaysfh~~~  387 (705)
T KOG0639|consen  320 LSGPYPAPFSLLPHAGMNGGLTSPG-----------SAAAYGRSPVMGFDPHPHMRASGIP-SLASIPGGKPAYSFHVSA  387 (705)
T ss_pred             CCCCCCCCcccCCccccCCCcCCCC-----------cccccccCCccccCCCCccccccCc-ccccCCCCcccccceecC
Confidence            479999999999999986 677666           2336999999999999999998888 888999999999999999


Q ss_pred             CCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCc
Q psy17188         82 DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNY  161 (504)
Q Consensus        82 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~  161 (504)
                      ||++..+.++++.+....+|...+++.++.|.+.|+++++|...+.+.||+.|.|+|||+...+...++..+.+....+.
T Consensus       388 dg~~qPvpfP~dal~g~gIPrharq~~tL~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdny  467 (705)
T KOG0639|consen  388 DGQMQPVPFPPDALVGPGIPRHARQINTLAHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNY  467 (705)
T ss_pred             CCcccCCCCCchhhcCCCCCchHHhhhhhccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999888999999999999999


Q ss_pred             eEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      |.++.+.|||+.|++|++-.++.|||+.........++......+++++.+||.+..++++.||.|.|||+.+...++.|
T Consensus       468 iRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqf  547 (705)
T KOG0639|consen  468 IRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQF  547 (705)
T ss_pred             eeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecc
Confidence            99999999999999999999999999999988888888888888999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      ++|...+.||.+++||..|.||+.|++||.||++++.                .+........|.++.++|++.+|++|.
T Consensus       548 qGhtDGascIdis~dGtklWTGGlDntvRcWDlregr----------------qlqqhdF~SQIfSLg~cP~~dWlavGM  611 (705)
T KOG0639|consen  548 QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGR----------------QLQQHDFSSQIFSLGYCPTGDWLAVGM  611 (705)
T ss_pred             cCCCCCceeEEecCCCceeecCCCccceeehhhhhhh----------------hhhhhhhhhhheecccCCCccceeeec
Confidence            9999999999999999999999999999999999987                666667788899999999999999999


Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      +++.+.+......   ....+..|...|.++.|.+-|+  ++++.+.|+.+..|...-+......      .....|.++
T Consensus       612 ens~vevlh~skp---~kyqlhlheScVLSlKFa~cGk--wfvStGkDnlLnawrtPyGasiFqs------kE~SsVlsC  680 (705)
T KOG0639|consen  612 ENSNVEVLHTSKP---EKYQLHLHESCVLSLKFAYCGK--WFVSTGKDNLLNAWRTPYGASIFQS------KESSSVLSC  680 (705)
T ss_pred             ccCcEEEEecCCc---cceeecccccEEEEEEecccCc--eeeecCchhhhhhccCccccceeec------cccCcceee
Confidence            9999988877653   4567778888999999999999  8999999999999988765433322      346678999


Q ss_pred             EEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        402 KLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      .+|.|.++|++|+.|....+|.+
T Consensus       681 DIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  681 DISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             eeccCceEEEecCCCcceEEEEE
Confidence            99999999999999998888864

>KOG0271|consensus

Probab=100.00  E-value=2.3e-51  Score=344.02  Aligned_cols=344  Identities=22%  Similarity=0.355  Sum_probs=293.9

Q ss_pred             cccCCCcCcc---cCCCCCccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCC
Q psy17188         48 VGYDPHSQMR---APLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP  124 (504)
Q Consensus        48 ~~~~p~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~  124 (504)
                      ..|-|+.-++   ..--.+++.||  ++.|.++.|+|+|..++.+..|..+.+|+...+......-+|...|.|++|+||
T Consensus        91 lvyqpqavfrvrpvtrCssS~~GH--~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPD  168 (480)
T KOG0271|consen   91 LVYQPQAVFRVRPVTRCSSSIAGH--GEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPD  168 (480)
T ss_pred             EEeccchhhcccccceeccccCCC--CCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCC
Confidence            4566665443   22235688888  889999999999999999999988888887665544444499999999999999


Q ss_pred             CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-----CCCEEEEecCCCcEEEEeCCCCCccceee
Q psy17188        125 TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-----DGRTLIVGGEASNLSIWDLASPTPRIKAE  198 (504)
Q Consensus       125 ~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  198 (504)
                      |+.||+|+ ||.|++||.++++..-.    .+.+|...|++++|.|     ..++||+++.||.|+|||+..++  ....
T Consensus       169 gk~iASG~~dg~I~lwdpktg~~~g~----~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~--~~~~  242 (480)
T KOG0271|consen  169 GKKIASGSKDGSIRLWDPKTGQQIGR----ALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT--CVRT  242 (480)
T ss_pred             cchhhccccCCeEEEecCCCCCcccc----cccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce--EEEE
Confidence            99999999 99999999988754332    2338999999999977     67899999999999999998655  4778


Q ss_pred             eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc-----------cCC----------
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-----------ADG----------  257 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-----------~~~----------  257 (504)
                      +.+|..+|+|+.|--+| ++++++.|++|++|+...|.+.+.+++|...|+.++.+           |.+          
T Consensus       243 lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~  321 (480)
T KOG0271|consen  243 LSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQ  321 (480)
T ss_pred             eccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHH
Confidence            89999999999997555 99999999999999999999999999999999999876           222          


Q ss_pred             ---------------CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188        258 ---------------TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       258 ---------------~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  322 (504)
                                     ..|++|+.|.++.+|+....+-            +  .....+|...|..+.|+||++++++++.
T Consensus       322 ~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk------------p--i~rmtgHq~lVn~V~fSPd~r~IASaSF  387 (480)
T KOG0271|consen  322 KKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK------------P--ITRMTGHQALVNHVSFSPDGRYIASASF  387 (480)
T ss_pred             HHHHHHHHHhhccCcceeEEecCCceEEEeccccccc------------c--hhhhhchhhheeeEEECCCccEEEEeec
Confidence                           3599999999999999765431            1  3345678899999999999999999999


Q ss_pred             CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEE
Q psy17188        323 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  402 (504)
Q Consensus       323 dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~  402 (504)
                      |..|++||.+++  +....+.+|-..|..++|+.|.+  ++++++.|.++++||+++.+...     ...+|..+|.++.
T Consensus       388 DkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsR--LlVS~SkDsTLKvw~V~tkKl~~-----DLpGh~DEVf~vD  458 (480)
T KOG0271|consen  388 DKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSR--LLVSGSKDSTLKVWDVRTKKLKQ-----DLPGHADEVFAVD  458 (480)
T ss_pred             ccceeeeeCCCc--chhhhhhhccceeEEEEeccCcc--EEEEcCCCceEEEEEeeeeeecc-----cCCCCCceEEEEE
Confidence            999999999998  56778889999999999999999  99999999999999998754332     3346899999999


Q ss_pred             EcCCCCEEEEeeCCCcEEEee
Q psy17188        403 LLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       403 ~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      |+|||+.+++|+.|..+++|.
T Consensus       459 wspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  459 WSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             ecCCCceeecCCCceEEEeec
Confidence            999999999999999999995

>KOG0319|consensus

Probab=100.00  E-value=1.1e-48  Score=354.36  Aligned_cols=451  Identities=20%  Similarity=0.321  Sum_probs=359.8

Q ss_pred             CCCCCCccccCCCcCcccCCCCC----------c--cC--CCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccc
Q psy17188         41 AYPRPPLVGYDPHSQMRAPLGPA----------S--LA--GIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQ  106 (504)
Q Consensus        41 ~~~~~~~~~~~p~~~~~~~~~~~----------~--~~--~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~  106 (504)
                      -|+..+ ++++++|+.+......          .  +.  .......+.+++++||++.+..+.....+..|.++.. +.
T Consensus        19 iYtGG~-~~~s~nG~~L~t~~~d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tg-k~   96 (775)
T KOG0319|consen   19 IYTGGP-VAWSSNGQHLYTACGDRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTG-KL   96 (775)
T ss_pred             eecCCc-eeECCCCCEEEEecCceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccc-hH
Confidence            355444 9999999887443321          1  11  1123355788999999988888888888888888876 55


Q ss_pred             eeee--cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC--EEEEecCCC
Q psy17188        107 INTL--SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEAS  181 (504)
Q Consensus       107 ~~~~--~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg  181 (504)
                      +...  .|+.+|.-++|+|.+.+|++|+ |+.++|||+..+.     ....+.+|.+.|.++.|.|+-.  .|++|..|+
T Consensus        97 irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~-----~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~  171 (775)
T KOG0319|consen   97 IRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGY-----CTHSFKGHGGVVSSLLFHPHWNRWLLASGATDG  171 (775)
T ss_pred             hHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCE-----EEEEecCCCceEEEEEeCCccchhheeecCCCc
Confidence            5555  5999999999999999999999 9999999998753     3344459999999999999654  589999999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-----
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-----  256 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-----  256 (504)
                      .+++||+.+... ....+..|...|++++|++|+..+++++.|..+.+||+.+.+..+++. -...+-++.+.++     
T Consensus       172 ~v~vwnl~~~~t-cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp-~ye~~E~vv~l~~~~~~~  249 (775)
T KOG0319|consen  172 TVRVWNLNDKRT-CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLP-LYESLESVVRLREELGGK  249 (775)
T ss_pred             eEEEEEcccCch-HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheec-hhhheeeEEEechhcCCc
Confidence            999999986554 567788999999999999999999999999999999998777766665 3445666666665     


Q ss_pred             CCEEEEEcCCCeEEEEECCCCce---------------------------------EEEeecC-----------------
Q psy17188        257 GTKLWTGGLDNTVRSWDLREGCV---------------------------------KVWDISQ-----------------  286 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~~~~---------------------------------~~~~~~~-----------------  286 (504)
                      +.++++++.+|.+++||.+++++                                 .+++...                 
T Consensus       250 ~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm  329 (775)
T KOG0319|consen  250 GEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDM  329 (775)
T ss_pred             ceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheee
Confidence            56899999999999999874431                                 1110000                 


Q ss_pred             --CC----------CCC--------CcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--Cccceeeecc
Q psy17188        287 --PG----------SKT--------PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--TPRIKAELTS  344 (504)
Q Consensus       287 --~~----------~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~  344 (504)
                        -+          ...        ........+|...|.++....+|-+|++++.|.++++|.++++  +........+
T Consensus       330 ~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~g  409 (775)
T KOG0319|consen  330 KFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANG  409 (775)
T ss_pred             eecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcc
Confidence              00          000        0011234567788888887777889999999999999988443  2344556678


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc----ccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL----DCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      |...+.+++++..+.. +|++++.|.++++|++...+.......+    ....|+..|++++++|+.+++|+|+.|.+.+
T Consensus       410 H~~svgava~~~~~as-ffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaK  488 (775)
T KOG0319|consen  410 HTNSVGAVAGSKLGAS-FFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAK  488 (775)
T ss_pred             cccccceeeecccCcc-EEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccccccee
Confidence            9999999999776665 8999999999999999873322222222    3456899999999999999999999999999


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ||+++  +......+.+|...|.++.|+|..+.++|+|.|++|+||.+++..+++++.||...|..+.|-.+|+.|++++
T Consensus       489 iW~le--~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~  566 (775)
T KOG0319|consen  489 IWDLE--QLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG  566 (775)
T ss_pred             eeccc--CceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc
Confidence            99999  4466778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q psy17188        501 LDN  503 (504)
Q Consensus       501 ~Dg  503 (504)
                      .||
T Consensus       567 adG  569 (775)
T KOG0319|consen  567 ADG  569 (775)
T ss_pred             CCC
Confidence            998

>KOG0318|consensus

Probab=100.00  E-value=4e-45  Score=318.84  Aligned_cols=420  Identities=17%  Similarity=0.286  Sum_probs=332.7

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCcccccee-ee-cCCCcEEEEEEcCCCcEEEEecC-----CeEEEEeCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQIN-TL-SHGEVVCAVTISNPTKYVYTGGK-----GCVKVWDISQ  143 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~h~~~V~~v~~s~~~~~l~~~~d-----~~i~vw~~~~  143 (504)
                      ...+.-..+||.|..++.+-..+.+.+|+.......+. ++ --.++|..++|+.+++.|++.++     |.+.+||..+
T Consensus        59 ~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~  138 (603)
T KOG0318|consen   59 AHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGN  138 (603)
T ss_pred             cceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCC
Confidence            45677788999998888877888888888766443333 33 46789999999999988887663     4566777543


Q ss_pred             CCCCCceeeeeecCCCCceEEEEEccCC-CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe
Q psy17188        144 PGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  222 (504)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  222 (504)
                        ..-.     ..+|...|+++.|-|.. -++++|++|++|.+|+-.  ..+....+..|..-|.|+.|+|||.++++++
T Consensus       139 --SvGe-----i~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGP--PFKFk~s~r~HskFV~~VRysPDG~~Fat~g  209 (603)
T KOG0318|consen  139 --SVGE-----ITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGP--PFKFKSSFREHSKFVNCVRYSPDGSRFATAG  209 (603)
T ss_pred             --ccce-----eeccceeEeeeeccCCCceEEEeccCCCeEEEeeCC--CeeeeecccccccceeeEEECCCCCeEEEec
Confidence              2222     23899999999999954 478999999999999854  3445667788999999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEeec---CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE-EEeecCC-----------
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQ---GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK-VWDISQP-----------  287 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~-~~~~~~~-----------  287 (504)
                      .||+|.+||-.+++.+..+.   +|.+.|.+++|+||+..+++++.|.++++||+.+.++. .|.+...           
T Consensus       210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq  289 (603)
T KOG0318|consen  210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ  289 (603)
T ss_pred             CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe
Confidence            99999999999999999998   89999999999999999999999999999999876532 1111100           


Q ss_pred             ----------------CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188        288 ----------------GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  351 (504)
Q Consensus       288 ----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~  351 (504)
                                      ....+.......+|...|+++..++++++|++++.||.|.-|+..++... ...-..|...|.+
T Consensus       290 kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~-~~~g~~h~nqI~~  368 (603)
T KOG0318|consen  290 KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSD-RLAGKGHTNQIKG  368 (603)
T ss_pred             CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccc-ccccccccceEEE
Confidence                            00111124445678999999999999999999999999999999887432 2233667889999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-----------cc-----------------------ccccccCCCc
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-----------VS-----------------------QLDCLQRDNY  397 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-----------~~-----------------------~~~~~~~~~~  397 (504)
                      ++.+..+.   +.+.+.|.++++.++........           +.                       ..........
T Consensus       369 ~~~~~~~~---~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~  445 (603)
T KOG0318|consen  369 MAASESGE---LFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYE  445 (603)
T ss_pred             EeecCCCc---EEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccc
Confidence            99888664   77888999999997743221110           00                       0000112234


Q ss_pred             eEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE-E
Q psy17188        398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-Q  476 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-~  476 (504)
                      ..+++++|++..+++|++|+.|++|.+...+.........|..+|+++++|||+.|||++...+.+.+||+.+.+... .
T Consensus       446 ~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~  525 (603)
T KOG0318|consen  446 SSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNR  525 (603)
T ss_pred             cceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecce
Confidence            678999999999999999999999999987766666778899999999999999999999999999999999987743 4


Q ss_pred             EeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        477 FQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       477 ~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +.-|...|.+++|+|+.+++||||-|-
T Consensus       526 w~FHtakI~~~aWsP~n~~vATGSlDt  552 (603)
T KOG0318|consen  526 WAFHTAKINCVAWSPNNKLVATGSLDT  552 (603)
T ss_pred             eeeeeeeEEEEEeCCCceEEEeccccc
Confidence            445999999999999999999999884

>KOG0291|consensus

Probab=100.00  E-value=2.5e-45  Score=333.23  Aligned_cols=405  Identities=15%  Similarity=0.247  Sum_probs=340.0

Q ss_pred             CCCCcceEEEECCCCCcccCCCCCCcccCCCCCcccc-------ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEE
Q psy17188         69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHAR-------QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVW  139 (504)
Q Consensus        69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw  139 (504)
                      .-+..+.++.|||||+..+++.... +-+|..|...+       +..+. +|.+.|+++.|+.|.++|++|+ |-.++||
T Consensus        94 ~fk~~v~~i~fSPng~~fav~~gn~-lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~  172 (893)
T KOG0291|consen   94 NFKRGVGAIKFSPNGKFFAVGCGNL-LQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLF  172 (893)
T ss_pred             eecCccceEEECCCCcEEEEEecce-eEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEE
Confidence            4567899999999999988887664 34455555544       22333 8999999999999999999999 9999999


Q ss_pred             eCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC-----------------------Ccc--
Q psy17188        140 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-----------------------TPR--  194 (504)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-----------------------~~~--  194 (504)
                      +++..+.   +....+.+|.+.|.++-|..+...+.+.+.||.+.+|.....                       +..  
T Consensus       173 ~v~~~k~---~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~  249 (893)
T KOG0291|consen  173 GVDGNKN---LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTH  249 (893)
T ss_pred             Eeccccc---cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhc
Confidence            9987433   455666799999999999999999999999999999987611                       000  


Q ss_pred             -------ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC-
Q psy17188        195 -------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD-  266 (504)
Q Consensus       195 -------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-  266 (504)
                             .+.-+......+++.+|++..+.|+++-..|...+|++....+++.+.-...+|..+.|+..|..|+.|+.. 
T Consensus       250 ~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~kl  329 (893)
T KOG0291|consen  250 KIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKL  329 (893)
T ss_pred             ceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCcc
Confidence                   011122233679999999999999999999999999999999999999888999999999999999998765 


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |.+.+|+..+...               .+...+|...+.+++++|||+++++|++||.|++||..++  -....+..|.
T Consensus       330 gQLlVweWqsEsY---------------VlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sg--fC~vTFteHt  392 (893)
T KOG0291|consen  330 GQLLVWEWQSESY---------------VLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSG--FCFVTFTEHT  392 (893)
T ss_pred             ceEEEEEeeccce---------------eeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCc--eEEEEeccCC
Confidence            8999999988764               6667789999999999999999999999999999999887  6677888999


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc-EEEeeCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLA  425 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~-i~iwd~~  425 (504)
                      ..++.+.|+..++  .+++.+.||+|+.||+........+..    .......+++..|.|..+++|+.|.- |++|+++
T Consensus       393 s~Vt~v~f~~~g~--~llssSLDGtVRAwDlkRYrNfRTft~----P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~q  466 (893)
T KOG0291|consen  393 SGVTAVQFTARGN--VLLSSSLDGTVRAWDLKRYRNFRTFTS----PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQ  466 (893)
T ss_pred             CceEEEEEEecCC--EEEEeecCCeEEeeeecccceeeeecC----CCceeeeEEEEcCCCCEEEeeccceEEEEEEEee
Confidence            9999999999999  899999999999999987654444333    22344669999999999999988864 9999999


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc-ceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +++.  ...+.+|.++|.+++|+|++..|++++.|.+||+||+-.. ..+.++. +...+..++|+|||+.|+++.-||
T Consensus       467 TGql--lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldg  542 (893)
T KOG0291|consen  467 TGQL--LDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLDG  542 (893)
T ss_pred             cCee--eehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEecc
Confidence            8854  4567899999999999999999999999999999998654 3344554 677899999999999999999887

>KOG0318|consensus

Probab=100.00  E-value=2.6e-44  Score=313.74  Aligned_cols=445  Identities=17%  Similarity=0.234  Sum_probs=336.2

Q ss_pred             cccCCCCCCCCCCC-CCCccccCCCcCcccCCC-----------------CCccCCCCCCCcceEEEECCCCCcccCCCC
Q psy17188         30 ALHNNLPPSLNAYP-RPPLVGYDPHSQMRAPLG-----------------PASLAGIPGGKPAYSYHVTTDGQMQPVPFP   91 (504)
Q Consensus        30 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~-----------------~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~   91 (504)
                      .-| .|-.++...+ +-.-+.++++++.++.+.                 ...+.||  ..++++++|-|....+.+...
T Consensus        91 ~~h-iLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~Gh--Sr~ins~~~KpsRPfRi~T~s  167 (603)
T KOG0318|consen   91 KEH-ILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGH--SRRINSVDFKPSRPFRIATGS  167 (603)
T ss_pred             cce-eeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceeecc--ceeEeeeeccCCCceEEEecc
Confidence            345 3555555444 434578888877553322                 2355666  678999999888766666665


Q ss_pred             CCc-ccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc
Q psy17188         92 PDA-LIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  169 (504)
Q Consensus        92 ~~~-~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  169 (504)
                      +|. +..++-|.-.-......|..-|.|+.|+|||.++++.+ ||+|.+||=.+++....+..  ..+|++.|.+++|+|
T Consensus       168 dDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~--~~aHkGsIfalsWsP  245 (603)
T KOG0318|consen  168 DDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED--SDAHKGSIFALSWSP  245 (603)
T ss_pred             CCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC--CCCccccEEEEEECC
Confidence            554 44444333322333337999999999999999999877 99999999888754433332  347999999999999


Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecC-cCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  248 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v  248 (504)
                      |++.+++++.|.+++|||+.+.+......+... ...-..+.|.  +..|++.+.+|.|.+++......++.+.+|...|
T Consensus       246 Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~I  323 (603)
T KOG0318|consen  246 DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSI  323 (603)
T ss_pred             CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccce
Confidence            999999999999999999998764333333222 1223445565  4589999999999999999999999999999999


Q ss_pred             EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188        249 SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  328 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  328 (504)
                      +++..++|+++|++|+.||.|.-|+..++..-              .+.-..|...|.+++-+..+. +++.+.|.++++
T Consensus       324 TaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~--------------~~~g~~h~nqI~~~~~~~~~~-~~t~g~Dd~l~~  388 (603)
T KOG0318|consen  324 TALTVSPDGKTIYSGSYDGHINSWDSGSGTSD--------------RLAGKGHTNQIKGMAASESGE-LFTIGWDDTLRV  388 (603)
T ss_pred             eEEEEcCCCCEEEeeccCceEEEEecCCcccc--------------ccccccccceEEEEeecCCCc-EEEEecCCeEEE
Confidence            99999999999999999999999999988631              233356788888888877555 566667888888


Q ss_pred             EeCCCCCc------------cc-----------------eeeec--------cCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        329 WDLASPTP------------RI-----------------KAELT--------SSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       329 ~d~~~~~~------------~~-----------------~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                      .++.....            .-                 ...+.        .-.....+++++|++.  .++.|+.|+.
T Consensus       389 ~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~--~vaVGG~Dgk  466 (603)
T KOG0318|consen  389 ISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGS--EVAVGGQDGK  466 (603)
T ss_pred             EecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCC--EEEEecccce
Confidence            86632210            00                 00001        1123456788999999  7999999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      +++|.+......   .......|..+|+++++|||+.+||++...+.+.+||+.+.+. ......-|...|.+++|+|+.
T Consensus       467 vhvysl~g~~l~---ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHtakI~~~aWsP~n  542 (603)
T KOG0318|consen  467 VHVYSLSGDELK---EEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KTNRWAFHTAKINCVAWSPNN  542 (603)
T ss_pred             EEEEEecCCccc---ceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ecceeeeeeeeEEEEEeCCCc
Confidence            999999875432   2334457899999999999999999999999999999998765 444455588899999999999


Q ss_pred             CEEEEeeCCCcEEEEEcCCcce-EEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        452 KVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +++|+|+-|-+|.||+++.... +....+|...|+.+.|-. ...|++.|.|-
T Consensus       543 ~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wld-e~tvvSsG~Da  594 (603)
T KOG0318|consen  543 KLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLD-ESTVVSSGQDA  594 (603)
T ss_pred             eEEEeccccceEEEEEccChhhheEeccccccCceeEEEec-CceEEeccCcc
Confidence            9999999999999999987644 444447998999999985 56788888873

>KOG0272|consensus

Probab=100.00  E-value=6.7e-47  Score=321.29  Aligned_cols=278  Identities=22%  Similarity=0.350  Sum_probs=254.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +.+.+|..+.|+.|++.|++|+.+|.+++|+..+.  .....+.+|...+.++.|+|.  +..+++++.||++++|++.+
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~--~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~  250 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC--NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ  250 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCc--ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC
Confidence            56789999999999999999999999999999865  468889999999999999996  56999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      ..++..+.+|...|..++|+|+|++|+|++.|.+-++||++++..               .+...+|...|.+++|.+||
T Consensus       251 e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~E---------------lL~QEGHs~~v~~iaf~~DG  315 (459)
T KOG0272|consen  251 ETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSE---------------LLLQEGHSKGVFSIAFQPDG  315 (459)
T ss_pred             CcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchh---------------hHhhcccccccceeEecCCC
Confidence            999999999999999999999999999999999999999999874               56667899999999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      ..+++|+.|..-+|||++++...  ..+.                                                 +|
T Consensus       316 SL~~tGGlD~~~RvWDlRtgr~i--m~L~-------------------------------------------------gH  344 (459)
T KOG0272|consen  316 SLAATGGLDSLGRVWDLRTGRCI--MFLA-------------------------------------------------GH  344 (459)
T ss_pred             ceeeccCccchhheeecccCcEE--EEec-------------------------------------------------cc
Confidence            99999999999999999987422  1111                                                 35


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      ..+|..++|+|+|..||+|+.|++++|||++....  .....+|..-|+.+.|+| .|.+|++++.|++++||...+..+
T Consensus       345 ~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~--ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~  422 (459)
T KOG0272|consen  345 IKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE--LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSP  422 (459)
T ss_pred             ccceeeEeECCCceEEeecCCCCcEEEeeeccccc--ceecccccchhhheEecccCCeEEEEcccCcceeeecCCCccc
Confidence            66788999999999999999999999999996544  667889999999999999 789999999999999999999999


Q ss_pred             EEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        474 VRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       474 ~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++++.||.+.|.+++.++|+.+++|+|.|+|
T Consensus       423 ~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT  453 (459)
T KOG0272|consen  423 LKSLAGHEGKVISLDISPDSQAIATSSFDRT  453 (459)
T ss_pred             chhhcCCccceEEEEeccCCceEEEeccCce
Confidence            9999999999999999999999999999986

>KOG0319|consensus

Probab=100.00  E-value=2e-45  Score=333.37  Aligned_cols=409  Identities=17%  Similarity=0.269  Sum_probs=334.4

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCC--cEEEEec-CCeEEEEeCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPT--KYVYTGG-KGCVKVWDISQPGSK  147 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~--~~l~~~~-d~~i~vw~~~~~~~~  147 (504)
                      .+++..+++.|.|.+++.+..++.+..|++..+......-||.+.|+++.|.|+-  .+|++|. |+.+++||+..... 
T Consensus       105 e~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t-  183 (775)
T KOG0319|consen  105 EAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT-  183 (775)
T ss_pred             CCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch-
Confidence            7889999999999999999999999999876555444444999999999999865  4567777 99999999986432 


Q ss_pred             CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc---------------------------------
Q psy17188        148 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR---------------------------------  194 (504)
Q Consensus       148 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---------------------------------  194 (504)
                       .+..  ...|...|++++|++|+..+++++.|..+.+||+.+.+..                                 
T Consensus       184 -cl~~--~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g  260 (775)
T KOG0319|consen  184 -CLHT--MILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSG  260 (775)
T ss_pred             -HHHH--HHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCc
Confidence             2222  2378999999999999999999999999999987321000                                 


Q ss_pred             ------------------------------------------------------ceeeeecCcCceEEEEE-CCCCCEEE
Q psy17188        195 ------------------------------------------------------IKAELTSSAPACYALAI-SPDSKVCF  219 (504)
Q Consensus       195 ------------------------------------------------------~~~~~~~~~~~v~~~~~-s~~~~~l~  219 (504)
                                                                            ....+-+..+.|.+++| .|+.++|+
T Consensus       261 ~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~la  340 (775)
T KOG0319|consen  261 VVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLA  340 (775)
T ss_pred             eEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEE
Confidence                                                                  00011133345666666 45678999


Q ss_pred             EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      +++..+.+++|++.+..+. .+.+|+..|.+++...+|-+|+||+.|.++++|.++++..+.           .......
T Consensus       341 VATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~-----------~~~a~~~  408 (775)
T KOG0319|consen  341 VATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKS-----------LCVAQAN  408 (775)
T ss_pred             EEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchh-----------hhhhhhc
Confidence            9999999999999887765 889999999999966678899999999999999996554211           1133445


Q ss_pred             ccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCc-------cceeeeccCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        300 QRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTP-------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                      +|.+.|.+++++..+ .+|++++.|+++++|++...+.       ........|...|.+++++|+.+  ++++++.|.+
T Consensus       409 gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk--LiAT~SqDkt  486 (775)
T KOG0319|consen  409 GHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK--LIATGSQDKT  486 (775)
T ss_pred             ccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCc--eEEecccccc
Confidence            788999999998755 6889999999999999976221       11223456888999999999999  9999999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      .++|++++...     .-...+|...+.++.|+|..+.+++++.|++|+||.+.+..  +...+.+|...|..+.|-.++
T Consensus       487 aKiW~le~~~l-----~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fS--ClkT~eGH~~aVlra~F~~~~  559 (775)
T KOG0319|consen  487 AKIWDLEQLRL-----LGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFS--CLKTFEGHTSAVLRASFIRNG  559 (775)
T ss_pred             eeeecccCceE-----EEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccce--eeeeecCccceeEeeeeeeCC
Confidence            99999984322     22334788999999999999999999999999999999764  566788999999999999999


Q ss_pred             CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        452 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +.|++++.||-|++|++++++++.++..|.+.|++++-++....++|||.||.
T Consensus       560 ~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~  612 (775)
T KOG0319|consen  560 KQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGR  612 (775)
T ss_pred             cEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeE
Confidence            99999999999999999999999999999999999999999999999999973

>KOG0291|consensus

Probab=100.00  E-value=1.5e-43  Score=321.71  Aligned_cols=410  Identities=16%  Similarity=0.222  Sum_probs=336.7

Q ss_pred             CCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCC--
Q psy17188         69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGS--  146 (504)
Q Consensus        69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~--  146 (504)
                      ..+..+..+++||+|..+...-..+..+... -.....++.+..+.+|.|+.|||+|+++|.+..+.+.||.......  
T Consensus        53 e~~~NI~~ialSp~g~lllavdE~g~~~lvs-~~~r~Vlh~f~fk~~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~  131 (893)
T KOG0291|consen   53 ETRYNITRIALSPDGTLLLAVDERGRALLVS-LLSRSVLHRFNFKRGVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNE  131 (893)
T ss_pred             ecCCceEEEEeCCCceEEEEEcCCCcEEEEe-cccceeeEEEeecCccceEEECCCCcEEEEEecceeEEEecCcchhcc
Confidence            3467888999999996554444433332222 2344566777888999999999999999999999999999754322  


Q ss_pred             CCce-eeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC
Q psy17188        147 KTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       147 ~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      ..++ ......+|...|.++.|+.|.++|++|+.|-.+++|.++..+......+.+|...|.++-|..+...+++.+.||
T Consensus       132 ~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG  211 (893)
T KOG0291|consen  132 FNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDG  211 (893)
T ss_pred             cCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCc
Confidence            1222 223455789999999999999999999999999999999877666788999999999999999999999999999


Q ss_pred             cEEEEECCC-----------------------CeE-----------EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEE
Q psy17188        226 NIAVWDLHN-----------------------QTL-----------VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRS  271 (504)
Q Consensus       226 ~i~iwd~~~-----------------------~~~-----------~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~  271 (504)
                      .+.+|....                       ++.           ..-+......|++.+|++.-+.|+++-..|...+
T Consensus       212 ~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~L  291 (893)
T KOG0291|consen  212 ALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGL  291 (893)
T ss_pred             eEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEE
Confidence            999998761                       111           1112223478999999999999999999999999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCCccceeeeccCCCcee
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACY  350 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~~~~~~~~~~~~i~  350 (504)
                      +++..-.+               .....-.+..|..++|+..|.+|+.|+.. |++.||+.++.  ....+.++|...+.
T Consensus       292 yelP~f~l---------------ih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE--sYVlKQQgH~~~i~  354 (893)
T KOG0291|consen  292 YELPDFNL---------------IHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE--SYVLKQQGHSDRIT  354 (893)
T ss_pred             EecCCceE---------------EEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecc--ceeeecccccccee
Confidence            99987654               22222345679999999999999998764 89999999887  56777888999999


Q ss_pred             eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc
Q psy17188        351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  430 (504)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~  430 (504)
                      +++++|||+  ++++|+.|+.|++||...+     +.......|...|+.+.|+..|+.+++.+-||+|+.||+......
T Consensus       355 ~l~YSpDgq--~iaTG~eDgKVKvWn~~Sg-----fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNf  427 (893)
T KOG0291|consen  355 SLAYSPDGQ--LIATGAEDGKVKVWNTQSG-----FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNF  427 (893)
T ss_pred             eEEECCCCc--EEEeccCCCcEEEEeccCc-----eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccccee
Confidence            999999999  8999999999999998765     334455578999999999999999999999999999999877665


Q ss_pred             eeecccCCCCceeEEEECCCCCEEEEeeCCC-cEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        431 IKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       431 ~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+..+.. ....+++..|.|..+++|+.|. .|++|++++|+++..+.||.++|.+++|+|++..|+++|+|+|
T Consensus       428 RTft~P~p-~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT  501 (893)
T KOG0291|consen  428 RTFTSPEP-IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT  501 (893)
T ss_pred             eeecCCCc-eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccce
Confidence            55554433 3467889999999999998875 6999999999999999999999999999999999999999987

>KOG0272|consensus

Probab=100.00  E-value=2.7e-46  Score=317.61  Aligned_cols=284  Identities=21%  Similarity=0.382  Sum_probs=256.3

Q ss_pred             ecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC--CCEEEEecCCCcEEEE
Q psy17188        110 LSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIW  186 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iw  186 (504)
                      ++-+.+|..+.||++++.|+||+ +|.++||+..+..   .+.  .+.+|...|.++.|+|.  +..||+++.||++++|
T Consensus       172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~---~~~--~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw  246 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN---LLQ--TLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLW  246 (459)
T ss_pred             ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc---eeE--EEeccccceeeEEEccCCCccceeeeccCCceeee
Confidence            36788999999999999999999 9999999988752   223  33399999999999996  6789999999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ++++..  ....+.+|...|..++|+|+|++|++++.|.+-++||+++++.+....||...|.+++|.+||.+++||+.|
T Consensus       247 ~~~~e~--~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD  324 (459)
T KOG0272|consen  247 KLSQET--PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLD  324 (459)
T ss_pred             ccCCCc--chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCcc
Confidence            998654  477889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      ..-+|||+++|..               .+...+|..+|.+++|+|+|..|++|+.|++++|||++...  ....++.|.
T Consensus       325 ~~~RvWDlRtgr~---------------im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~--~ly~ipAH~  387 (459)
T KOG0272|consen  325 SLGRVWDLRTGRC---------------IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS--ELYTIPAHS  387 (459)
T ss_pred             chhheeecccCcE---------------EEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc--cceeccccc
Confidence            9999999999986               45556799999999999999999999999999999999874  478889999


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .-|..+.++|+... ++++++.|+++++|..+.....+.+     .+|++.|.++.+++|++++++++.|.++++|.
T Consensus       388 nlVS~Vk~~p~~g~-fL~TasyD~t~kiWs~~~~~~~ksL-----aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  388 NLVSQVKYSPQEGY-FLVTASYDNTVKIWSTRTWSPLKSL-----AGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             chhhheEecccCCe-EEEEcccCcceeeecCCCcccchhh-----cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            99999999995444 8999999999999998775444333     47999999999999999999999999999995

>KOG0315|consensus

Probab=100.00  E-value=4.7e-44  Score=283.27  Aligned_cols=298  Identities=22%  Similarity=0.418  Sum_probs=256.8

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  204 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  204 (504)
                      -+|++++ |.+|++|...+|.+...++     ..++.|+.+...||++.||+++. -.|++||+.+.++.....+.+|..
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~k   84 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTK   84 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCC
Confidence            5788888 9999999999986555444     45788999999999999999975 689999999999888999999999


Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      .|+++.|..+|+.+++|++||+++|||++...+.+.++ |..+|+++..+|+...|+++..+|.|++||+.+..+.    
T Consensus        85 NVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~----  159 (311)
T KOG0315|consen   85 NVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT----  159 (311)
T ss_pred             ceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc----
Confidence            99999999999999999999999999999987777777 8899999999999999999999999999999987542    


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS  364 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  364 (504)
                                ..........|.++...|||.+++.+...|+.++|++.........                        
T Consensus       160 ----------~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l------------------------  205 (311)
T KOG0315|consen  160 ----------HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASEL------------------------  205 (311)
T ss_pred             ----------cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccc------------------------
Confidence                      2222344577999999999999999999999999998763211000                        


Q ss_pred             eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188        365 SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  444 (504)
Q Consensus       365 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  444 (504)
                                           ....+...|...+..+.+|||+++||+++.|.+++||+.++. ......+.+|...+..
T Consensus       206 ---------------------~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWd  263 (311)
T KOG0315|consen  206 ---------------------EPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWD  263 (311)
T ss_pred             ---------------------eEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEe
Confidence                                 011123367888999999999999999999999999999876 5566778899999999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEc
Q psy17188        445 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       445 l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s  490 (504)
                      ++||.|++||++|+.|+.+++|++..++.+..+.+|.....|++..
T Consensus       264 c~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  264 CAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             eeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            9999999999999999999999999999999999999888887754

>KOG0286|consensus

Probab=100.00  E-value=1.1e-43  Score=287.68  Aligned_cols=288  Identities=22%  Similarity=0.398  Sum_probs=251.2

Q ss_pred             eee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        108 NTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       108 ~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      ..+ ||.+.|.++.|++|.++|++++ ||.+.|||.-+......+.     -...+|..++|+|.|+++|+|+.|+...|
T Consensus        49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haip-----l~s~WVMtCA~sPSg~~VAcGGLdN~Csi  123 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIP-----LPSSWVMTCAYSPSGNFVACGGLDNKCSI  123 (343)
T ss_pred             EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEe-----cCceeEEEEEECCCCCeEEecCcCceeEE
Confidence            455 9999999999999999999999 9999999987754333332     34688999999999999999999999999


Q ss_pred             EeCCCC----CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEE
Q psy17188        186 WDLASP----TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKL  260 (504)
Q Consensus       186 w~~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l  260 (504)
                      |++.+.    .......+.+|.+.+.|+.|.+|+ .|++++.|.+..+||+++++.+..|.+|.+.|.+++++| +++.+
T Consensus       124 y~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF  202 (343)
T KOG0286|consen  124 YPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF  202 (343)
T ss_pred             EecccccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE
Confidence            999854    234566789999999999999855 789999999999999999999999999999999999999 99999


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++|+.|+..++||++.+..               ......|+..|++++|.|+|.-+++|+.|++.++||++..+.    
T Consensus       203 vSg~cD~~aklWD~R~~~c---------------~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~----  263 (343)
T KOG0286|consen  203 VSGGCDKSAKLWDVRSGQC---------------VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQE----  263 (343)
T ss_pred             EecccccceeeeeccCcce---------------eEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcE----
Confidence            9999999999999999976               556678999999999999999999999999999999987532    


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                                                     +.+|.-+              .....|++++||..|++|++|..|.++.
T Consensus       264 -------------------------------~a~ys~~--------------~~~~gitSv~FS~SGRlLfagy~d~~c~  298 (343)
T KOG0286|consen  264 -------------------------------LAVYSHD--------------SIICGITSVAFSKSGRLLFAGYDDFTCN  298 (343)
T ss_pred             -------------------------------EeeeccC--------------cccCCceeEEEcccccEEEeeecCCcee
Confidence                                           2222210              1245688999999999999999999999


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      +||.-.+  .....+.+|...|+++..+|||.-|++|+.|..++||.
T Consensus       299 vWDtlk~--e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  299 VWDTLKG--ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             Eeecccc--ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            9998755  44556779999999999999999999999999999994

>KOG0306|consensus

Probab=100.00  E-value=3e-42  Score=313.10  Aligned_cols=407  Identities=19%  Similarity=0.299  Sum_probs=322.1

Q ss_pred             CCCcccCCCCCCcccCCCCCcc--ccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCC
Q psy17188         82 DGQMQPVPFPPDALIGPGIPRH--ARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQR  158 (504)
Q Consensus        82 ~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~  158 (504)
                      .|+..+++.-. .+..|++...  .+.+....-...|+|+.-+++..+||.|- ||.|+||+..++     ...+.+.+|
T Consensus        33 ~Gr~va~~a~E-~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-----~~~~tfngH  106 (888)
T KOG0306|consen   33 KGRAVAVSALE-QVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESE-----EILITFNGH  106 (888)
T ss_pred             CCcEEEEeccc-cEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCC-----ceeeeeccc
Confidence            46555553333 3445665544  34455555667999999999999999998 999999999864     234455589


Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  238 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~  238 (504)
                      ...|+++.|...|..|++|+.|+.|.+||+-...  -...+.+|...|+..-|..+.+++++.+.|+.|++||+++..+.
T Consensus       107 K~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~--Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf  184 (888)
T KOG0306|consen  107 KAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEE--GLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCF  184 (888)
T ss_pred             ccceEEEEEcccCceEeecCCCccEEEEEeccce--eeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceee
Confidence            9999999999999999999999999999998544  47889999999999999988889999999999999999999999


Q ss_pred             EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC------------------------------------------
Q psy17188        239 RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE------------------------------------------  276 (504)
Q Consensus       239 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~------------------------------------------  276 (504)
                      .+...|.+.+..+++.+  +.+++++.|+.+++|++..                                          
T Consensus       185 ~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~  262 (888)
T KOG0306|consen  185 ETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQ  262 (888)
T ss_pred             eEEecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEe
Confidence            99999999999999987  6899999999999999820                                          


Q ss_pred             --------------------------------------------------------------------------------
Q psy17188        277 --------------------------------------------------------------------------------  276 (504)
Q Consensus       277 --------------------------------------------------------------------------------  276 (504)
                                                                                                      
T Consensus       263 g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~  342 (888)
T KOG0306|consen  263 GADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLA  342 (888)
T ss_pred             cchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEee
Confidence                                                                                            


Q ss_pred             -CceEEEeecCCCC----CCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc---------------
Q psy17188        277 -GCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP---------------  336 (504)
Q Consensus       277 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---------------  336 (504)
                       ..+..+.+.....    ......+...+|...|++++++.+...++++ ..+.+++|+..+.+.               
T Consensus       343 nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~kciRTi~~~y~l~~~Fv  421 (888)
T KOG0306|consen  343 NNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTLKCIRTITCGYILASKFV  421 (888)
T ss_pred             cCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeec-CCCcEEEEEccCcceeEEeccccEEEEEec
Confidence             0011111111011    1112234555677778888877766555554 345666666654321               


Q ss_pred             -----------------------cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC----C---Ccc
Q psy17188        337 -----------------------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS----K---TPV  386 (504)
Q Consensus       337 -----------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~---~~~  386 (504)
                                             ........|.+.+..++.+||++  .+++++.|.+|++||+.....    .   ..+
T Consensus       422 pgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~--g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl  499 (888)
T KOG0306|consen  422 PGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNK--GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSL  499 (888)
T ss_pred             CCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCC--ceEEecCCcEEEEEeEEEEeccCcccceeeee
Confidence                                   22233457899999999999999  699999999999999853222    1   111


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      .......-...|.|+.+||||++|+++--|.++++|-+++-  .....+.+|.-+|.++.+|||+++++||+.|.+|+||
T Consensus       500 ~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtl--KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiW  577 (888)
T KOG0306|consen  500 KHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTL--KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIW  577 (888)
T ss_pred             ccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecce--eeeeeecccccceeEEeccCCcCeEEeccCCCceEEe
Confidence            22233345678999999999999999999999999999854  5567789999999999999999999999999999999


Q ss_pred             EcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        467 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       467 d~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      -++-|.+-+.+-+|.+.|.++.|-|+...++++|.||
T Consensus       578 GLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~  614 (888)
T KOG0306|consen  578 GLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDG  614 (888)
T ss_pred             ccccchhhhhhhcccCceeEEEEcccceeEEEecCcc
Confidence            9999999999999999999999999999999999997

>KOG0296|consensus

Probab=100.00  E-value=7.7e-42  Score=285.38  Aligned_cols=334  Identities=20%  Similarity=0.284  Sum_probs=271.6

Q ss_pred             ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      .+.++ .|++.|.+++.+|+.++++||+ |..-.||++.+++     ....+.+|+..|+++.|+.||.+||+|+.+|.|
T Consensus        56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-----~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v  130 (399)
T KOG0296|consen   56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-----FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKV  130 (399)
T ss_pred             ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc-----ceeEecCCCCceEEEEEccCceEEEecCCCccE
Confidence            34455 8999999999999999999999 9999999999875     223344899999999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      +||+..++..  ...+......+.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+.+|..++++=.|.|+|++++++
T Consensus       131 ~v~~~stg~~--~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tg  208 (399)
T KOG0296|consen  131 LVFKVSTGGE--QWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTG  208 (399)
T ss_pred             EEEEcccCce--EEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEE
Confidence            9999998765  33444556668889999999999999999999999999998999999999999999999999999999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      ..||+|++|++.+++...             .+.. .......++.++..+..++.|+.++.+++-+..+++....  ..
T Consensus       209 y~dgti~~Wn~ktg~p~~-------------~~~~-~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~--~n  272 (399)
T KOG0296|consen  209 YDDGTIIVWNPKTGQPLH-------------KITQ-AEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNC--NN  272 (399)
T ss_pred             ecCceEEEEecCCCceeE-------------Eecc-cccCcCCccccccccceeEeccCCccEEEEccccceEEEe--cC
Confidence            999999999999997421             1111 1244567888888999999999999888877665521100  00


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .            ...                          ............|..+.++..=.+.|+|+-||+|.|||
T Consensus       273 ~------------~~~--------------------------~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD  314 (399)
T KOG0296|consen  273 G------------TVP--------------------------ELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYD  314 (399)
T ss_pred             C------------CCc--------------------------cccccchhhhhhhhhcccccccchhhcccccceEEEEe
Confidence            0            000                          00000001122344556666667889999999999999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +...+.+....   |...|+.+.|-+ ..+|++++.||.|+.||.++|+++.++.+|...|.+++.+|+.++++|+|.|+
T Consensus       315 ~a~~~~R~~c~---he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~  390 (399)
T KOG0296|consen  315 LAASTLRHICE---HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDN  390 (399)
T ss_pred             cccchhheecc---CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCC
Confidence            99776655443   556699999998 78999999999999999999999999999999999999999999999999998


Q ss_pred             C
Q psy17188        504 T  504 (504)
Q Consensus       504 t  504 (504)
                      |
T Consensus       391 ~  391 (399)
T KOG0296|consen  391 T  391 (399)
T ss_pred             e
Confidence            6

>KOG0279|consensus

Probab=100.00  E-value=1.3e-41  Score=273.98  Aligned_cols=291  Identities=20%  Similarity=0.419  Sum_probs=248.4

Q ss_pred             eecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEE
Q psy17188        154 DCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  229 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  229 (504)
                      ...+|.+.|+.++..+. .+.|++++.|.++.+|++......   ....+.+|...|..+..++||++.++++.|+++++
T Consensus        10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrl   89 (315)
T KOG0279|consen   10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRL   89 (315)
T ss_pred             eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEE
Confidence            34489999999999985 678889999999999999765433   37788999999999999999999999999999999


Q ss_pred             EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      ||+.+++..+.|.+|...|.+++|++|.+.+++|+.|.+|++|+...+...              ......+.+.|.++.
T Consensus        90 WDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~--------------t~~~~~~~~WVscvr  155 (315)
T KOG0279|consen   90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY--------------TIHEDSHREWVSCVR  155 (315)
T ss_pred             EEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE--------------EEecCCCcCcEEEEE
Confidence            999999999999999999999999999999999999999999999876521              222223378899999


Q ss_pred             EcCC--CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        310 LLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       310 ~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      |+|+  ..+|+.++.|+++++||+++.  +....+.+|...++.++++|||.  +.++|+.||.+.+||++..+.     
T Consensus       156 fsP~~~~p~Ivs~s~DktvKvWnl~~~--~l~~~~~gh~~~v~t~~vSpDGs--lcasGgkdg~~~LwdL~~~k~-----  226 (315)
T KOG0279|consen  156 FSPNESNPIIVSASWDKTVKVWNLRNC--QLRTTFIGHSGYVNTVTVSPDGS--LCASGGKDGEAMLWDLNEGKN-----  226 (315)
T ss_pred             EcCCCCCcEEEEccCCceEEEEccCCc--chhhccccccccEEEEEECCCCC--EEecCCCCceEEEEEccCCce-----
Confidence            9997  678999999999999999976  56667788999999999999999  899999999999999987654     


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-------CCCCceeEEEECCCCCEEEEeeCC
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-------SSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                       +....+...|.+++|+|+.-.|+.+. +..|+|||+.++..+......       .......+++|++||..|++|..|
T Consensus       227 -lysl~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td  304 (315)
T KOG0279|consen  227 -LYSLEAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTD  304 (315)
T ss_pred             -eEeccCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecC
Confidence             33346788899999999987777665 445999999987655443322       223456789999999999999999


Q ss_pred             CcEEEEEcC
Q psy17188        461 GNIAVWDLH  469 (504)
Q Consensus       461 g~i~iwd~~  469 (504)
                      +.|++|.+.
T Consensus       305 ~~irv~qv~  313 (315)
T KOG0279|consen  305 NVIRVWQVA  313 (315)
T ss_pred             CcEEEEEee
Confidence            999999875

>KOG0286|consensus

Probab=100.00  E-value=1.1e-41  Score=276.16  Aligned_cols=291  Identities=22%  Similarity=0.367  Sum_probs=260.6

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....+++|...|.++.|++|.+.|++++.||.+.|||.-+...++.+......|..++|+|.|+++++|+.|+...||++
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL  126 (343)
T ss_pred             eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence            35789999999999999999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      .+....         ...........|.+.+.+..|-+| ..|++++.|.+..+||++++  +....+.+|.+.|.++++
T Consensus       127 s~~d~~---------g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g--~~~~~f~GH~gDV~slsl  194 (343)
T KOG0286|consen  127 STRDAE---------GNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETG--QQTQVFHGHTGDVMSLSL  194 (343)
T ss_pred             cccccc---------ccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccc--eEEEEecCCcccEEEEec
Confidence            854210         000013445689999999999985 56999999999999999988  677888899999999999


Q ss_pred             CC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        355 SP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       355 ~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      +| +++  .|++++-|+..++||++.+....     .+..|+..|+++.|.|+|.-+++|++|++.++||++....+..+
T Consensus       195 ~p~~~n--tFvSg~cD~~aklWD~R~~~c~q-----tF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~y  267 (343)
T KOG0286|consen  195 SPSDGN--TFVSGGCDKSAKLWDVRSGQCVQ-----TFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVY  267 (343)
T ss_pred             CCCCCC--eEEecccccceeeeeccCcceeE-----eecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeee
Confidence            99 666  89999999999999999864333     34578999999999999999999999999999999998888888


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ........|++++||..|++|++|..|.++.+||.-.++.+..+.+|...|.++..+|||.-++|||.|.+
T Consensus       268 s~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~  338 (343)
T KOG0286|consen  268 SHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDST  338 (343)
T ss_pred             ccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHh
Confidence            87777888999999999999999999999999999999999999999999999999999999999999864

>KOG0306|consensus

Probab=100.00  E-value=2.2e-41  Score=307.53  Aligned_cols=406  Identities=17%  Similarity=0.303  Sum_probs=340.9

Q ss_pred             CccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeC
Q psy17188         63 ASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDI  141 (504)
Q Consensus        63 ~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~  141 (504)
                      -.+.||  ...|.++.+...|..++.+..|..+++|++-........-||.+.|+..-|..+.++|++.+ |+.|++||+
T Consensus       101 ~tfngH--K~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL  178 (888)
T KOG0306|consen  101 ITFNGH--KAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDL  178 (888)
T ss_pred             eeeccc--ccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEec
Confidence            356677  88899999999999999999999999999888887777779999999999999888888888 999999999


Q ss_pred             CCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC------------------------------
Q psy17188        142 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP------------------------------  191 (504)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~------------------------------  191 (504)
                      ++..+....     ..|.+.|.++++.+  +.+++++.|+.+.+|++...                              
T Consensus       179 ~tqhCf~Th-----vd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~  251 (888)
T KOG0306|consen  179 ETQHCFETH-----VDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLV  251 (888)
T ss_pred             ccceeeeEE-----ecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEe
Confidence            885333222     27899999999987  78888889999999987100                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy17188        192 --------------------------------------------------------------------------------  191 (504)
Q Consensus       192 --------------------------------------------------------------------------------  191 (504)
                                                                                                      
T Consensus       252 ~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~  331 (888)
T KOG0306|consen  252 TDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPS  331 (888)
T ss_pred             ecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEec
Confidence                                                                                            


Q ss_pred             --Cc----------------------------cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        192 --TP----------------------------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       192 --~~----------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                        ..                            .....+.+|...|.+++++.+...+++++ .+.|++|+..+.++++++
T Consensus       332 ~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi  410 (888)
T KOG0306|consen  332 GGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTI  410 (888)
T ss_pred             CCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEe
Confidence              00                            00023446777889999998887777664 578999999999999999


Q ss_pred             cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      ..  +.+.+..|.|.++++++|...|.+.++|+.+..+               .-....|++.+.+++.+||++.+++++
T Consensus       411 ~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l---------------~Eti~AHdgaIWsi~~~pD~~g~vT~s  473 (888)
T KOG0306|consen  411 TC--GYILASKFVPGDRYIVLGTKNGELQVFDLASASL---------------VETIRAHDGAIWSISLSPDNKGFVTGS  473 (888)
T ss_pred             cc--ccEEEEEecCCCceEEEeccCCceEEEEeehhhh---------------hhhhhccccceeeeeecCCCCceEEec
Confidence            73  3889999999999999999999999999998764               333447899999999999999999999


Q ss_pred             CCCcEEEEeCCCCC-----cccee-----eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188        322 EASNLSIWDLASPT-----PRIKA-----ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       322 ~dg~i~v~d~~~~~-----~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  391 (504)
                      .|.+|++||..-..     .....     ..-.-...+.++.+|||++  +++.+--|+++++|-+++..     ..+..
T Consensus       474 aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk--~LaVsLLdnTVkVyflDtlK-----FflsL  546 (888)
T KOG0306|consen  474 ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK--LLAVSLLDNTVKVYFLDTLK-----FFLSL  546 (888)
T ss_pred             CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCc--EEEEEeccCeEEEEEeccee-----eeeee
Confidence            99999999974211     11101     1112345899999999999  89999999999999987643     23445


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      .+|.-+|.|+..|||++++++|+.|..|++|-++=+.  +...+.+|...|+++.|.|+...+++++.|+.|+-||-.+-
T Consensus       547 YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGD--CHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kF  624 (888)
T KOG0306|consen  547 YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGD--CHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKF  624 (888)
T ss_pred             cccccceeEEeccCCcCeEEeccCCCceEEeccccch--hhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhh
Confidence            6899999999999999999999999999999988664  44567789999999999999999999999999999999999


Q ss_pred             ceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        472 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       472 ~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++++.+.+|...|++++.+|+|.+++++|.|.+
T Consensus       625 e~iq~L~~H~~ev~cLav~~~G~~vvs~shD~s  657 (888)
T KOG0306|consen  625 EEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKS  657 (888)
T ss_pred             hhheeeccchheeeeeEEcCCCCeEEeccCCce
Confidence            999999999999999999999999999999875

>KOG0273|consensus

Probab=100.00  E-value=2.7e-41  Score=291.09  Aligned_cols=331  Identities=21%  Similarity=0.347  Sum_probs=278.5

Q ss_pred             eecCCCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCC-CCCc-e---ee----eeecCCCCceEEEEEccCCCEEEEe
Q psy17188        109 TLSHGEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPG-SKTP-V---SQ----LDCLQRDNYIRSVKLLPDGRTLIVG  177 (504)
Q Consensus       109 ~~~h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~-~~~~-~---~~----~~~~~~~~~v~~~~~s~~~~~l~~~  177 (504)
                      .+.|+.+|++.+|+|-.. ++++++ |-..++|++.... .... .   ..    .........|++++|+.+|..||+|
T Consensus       174 vl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG  253 (524)
T KOG0273|consen  174 VLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATG  253 (524)
T ss_pred             eccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEe
Confidence            346999999999999666 888887 9999999986411 0000 0   00    0111234679999999999999999


Q ss_pred             cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      +.||.++||+....   ....+..|.++|.++.|+.+|.+|++++.|+++.+||..+++..+.+..|..+-..+.|-.+.
T Consensus       254 ~~~G~~riw~~~G~---l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~  330 (524)
T KOG0273|consen  254 SEDGEARIWNKDGN---LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND  330 (524)
T ss_pred             ecCcEEEEEecCch---hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc
Confidence            99999999998754   367788999999999999999999999999999999999999999999999987889997644


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                       .+++++.|+.|+++.+.....               .....+|.++|.++.|+|.+.+|++++.|+++++|.....  .
T Consensus       331 -~F~ts~td~~i~V~kv~~~~P---------------~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~--~  392 (524)
T KOG0273|consen  331 -EFATSSTDGCIHVCKVGEDRP---------------VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS--N  392 (524)
T ss_pred             -eEeecCCCceEEEEEecCCCc---------------ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC--c
Confidence             789999999999999886652               4445679999999999999999999999999999997655  5


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA  416 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~d  416 (504)
                      ....+..|...|..+.|+|.+..                                         .+.| .+..+++++.|
T Consensus       393 ~~~~l~~Hskei~t~~wsp~g~v-----------------------------------------~~n~~~~~~l~sas~d  431 (524)
T KOG0273|consen  393 SVHDLQAHSKEIYTIKWSPTGPV-----------------------------------------TSNPNMNLMLASASFD  431 (524)
T ss_pred             chhhhhhhccceeeEeecCCCCc-----------------------------------------cCCCcCCceEEEeecC
Confidence            56677888889999999998751                                         1122 35678899999


Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEE
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  496 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l  496 (504)
                      ++|++||+..+.+  ...+..|..+|.+++|+|+|+++|+|+.||.|.||+++++++++.+.+ .+.|..++|+.+|.+|
T Consensus       432 stV~lwdv~~gv~--i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl  508 (524)
T KOG0273|consen  432 STVKLWDVESGVP--IHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKL  508 (524)
T ss_pred             CeEEEEEccCCce--eEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEE
Confidence            9999999997754  555778999999999999999999999999999999999999999985 5669999999999999


Q ss_pred             EEecCCCC
Q psy17188        497 WTGGLDNT  504 (504)
Q Consensus       497 ~s~s~Dgt  504 (504)
                      ..+-.||.
T Consensus       509 ~~~~sd~~  516 (524)
T KOG0273|consen  509 GACASDGS  516 (524)
T ss_pred             EEEecCCC
Confidence            88887763

>KOG0279|consensus

Probab=100.00  E-value=8.9e-41  Score=269.24  Aligned_cols=296  Identities=21%  Similarity=0.372  Sum_probs=242.8

Q ss_pred             eeee-cCCCcEEEEEEcCC-CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        107 INTL-SHGEVVCAVTISNP-TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~-~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ..++ +|.+.|+.++..+. ...+.+++ |.++.+|++.......-.....+.+|...|..+..++||++.++++.|+++
T Consensus         8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l   87 (315)
T KOG0279|consen    8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL   87 (315)
T ss_pred             eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence            3445 89999999999986 46777777 999999999876554444455566899999999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-CCCCeEEEEEccC--CCEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISAD--GTKL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~--~~~l  260 (504)
                      ++||+.+++  ....+.+|...|.+++|++|.+.+++|+.|.+|++|++........... +.+.|.|+.|+|+  ..+|
T Consensus        88 rlWDl~~g~--~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~I  165 (315)
T KOG0279|consen   88 RLWDLATGE--STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPII  165 (315)
T ss_pred             EEEEecCCc--EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEE
Confidence            999999875  4778899999999999999999999999999999999876554444433 3789999999997  6799


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++++.|+++++||+++.++               .....+|...++.++++|||...++|+.||.+.+||++.++.   .
T Consensus       166 vs~s~DktvKvWnl~~~~l---------------~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~---l  227 (315)
T KOG0279|consen  166 VSASWDKTVKVWNLRNCQL---------------RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN---L  227 (315)
T ss_pred             EEccCCceEEEEccCCcch---------------hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce---e
Confidence            9999999999999998875               445567899999999999999999999999999999998754   3


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc----cccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD----CLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      ....+...|.+++|+|+.-   .+....+..|+|||++.......+..-.    .........+++|++||..|++|..|
T Consensus       228 ysl~a~~~v~sl~fspnry---wL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td  304 (315)
T KOG0279|consen  228 YSLEAFDIVNSLCFSPNRY---WLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTD  304 (315)
T ss_pred             EeccCCCeEeeEEecCCce---eEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecC
Confidence            3445666999999999985   3444445569999998764433322111    11123445688999999999999999


Q ss_pred             CcEEEeeCC
Q psy17188        417 SNLSIWDLA  425 (504)
Q Consensus       417 g~i~iwd~~  425 (504)
                      +.|++|.+.
T Consensus       305 ~~irv~qv~  313 (315)
T KOG0279|consen  305 NVIRVWQVA  313 (315)
T ss_pred             CcEEEEEee
Confidence            999999875

>KOG0645|consensus

Probab=100.00  E-value=4.1e-40  Score=264.26  Aligned_cols=296  Identities=19%  Similarity=0.273  Sum_probs=246.2

Q ss_pred             ceeee-cCCCcEEEEEEcCC-CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        106 QINTL-SHGEVVCAVTISNP-TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~-~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      .++.+ +|.+.|..++|+|- |.+||+++ |+.|++|+...+........+. .+|+..|++++|+|.|++||+++.|.+
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld-~~hkrsVRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD-DGHKRSVRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEecc-ccchheeeeeeecCCCcEEEEeeccce
Confidence            34455 89999999999997 89999998 9999999988643333333333 379999999999999999999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCCCE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                      +.||.-..++......+.+|+..|.|++|+++|++||+++.|..|.||.+..+   ++...++.|...|..+.|+|...+
T Consensus        85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl  164 (312)
T KOG0645|consen   85 VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL  164 (312)
T ss_pred             EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence            99999988888889999999999999999999999999999999999998854   678889999999999999998889


Q ss_pred             EEEEcCCCeEEEEECC-CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc
Q psy17188        260 LWTGGLDNTVRSWDLR-EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  338 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~  338 (504)
                      |+++++|.+|++|+-. .+....             ......|...|.+++|++.|..|++++.|++++||...+.    
T Consensus       165 L~S~SYDnTIk~~~~~~dddW~c-------------~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~----  227 (312)
T KOG0645|consen  165 LFSCSYDNTIKVYRDEDDDDWEC-------------VQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD----  227 (312)
T ss_pred             eEEeccCCeEEEEeecCCCCeeE-------------EEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC----
Confidence            9999999999999877 333211             4445567779999999999999999999999999986532    


Q ss_pred             eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc--ccccccCCCceEEEEEcCC-CCEEEEeeC
Q psy17188        339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS--QLDCLQRDNYIRSVKLLPD-GRTLIVGGE  415 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~-g~~l~~~~~  415 (504)
                        ....|...+..++|. ++   .+++++.|+.|++|............  ......|...|++++|.|. ..+|++++.
T Consensus       228 --~~~~~sr~~Y~v~W~-~~---~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~D  301 (312)
T KOG0645|consen  228 --LSGMHSRALYDVPWD-NG---VIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGD  301 (312)
T ss_pred             --cchhcccceEeeeec-cc---ceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCC
Confidence              223455688889998 43   79999999999999877432222221  2234457889999999995 678999999


Q ss_pred             CCcEEEeeCC
Q psy17188        416 ASNLSIWDLA  425 (504)
Q Consensus       416 dg~i~iwd~~  425 (504)
                      ||.|++|.+.
T Consensus       302 DG~v~~W~l~  311 (312)
T KOG0645|consen  302 DGIVNFWELE  311 (312)
T ss_pred             CceEEEEEec
Confidence            9999999864

>KOG0265|consensus

Probab=100.00  E-value=2.9e-39  Score=263.16  Aligned_cols=292  Identities=22%  Similarity=0.376  Sum_probs=252.4

Q ss_pred             eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        154 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                      ...+|++.|..+.|+|+|.+||+|+.|..|.+|++.. .++....+++|.+.|..+.|.+|++.+++++.|.+|+.||++
T Consensus        42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g-dceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~  120 (338)
T KOG0265|consen   42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG-DCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE  120 (338)
T ss_pred             hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc-cccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence            3448999999999999999999999999999999765 344567788999999999999999999999999999999999


Q ss_pred             CCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                      +|+.++.+++|..-|+.++-+.-| .++.+++.|+++++||+++..                .........+++++.|..
T Consensus       121 tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~----------------~~~t~~~kyqltAv~f~d  184 (338)
T KOG0265|consen  121 TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE----------------AIKTFENKYQLTAVGFKD  184 (338)
T ss_pred             cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc----------------hhhccccceeEEEEEecc
Confidence            999999999999999999854434 367789999999999999876                444455567799999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-cccccc
Q psy17188        313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-VSQLDC  391 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~  391 (504)
                      ++..+.+|+-|+.|++||++..  .....+.+|...|+.+..++++.  ++.+-+.|.++++||++.-..... +..+..
T Consensus       185 ~s~qv~sggIdn~ikvWd~r~~--d~~~~lsGh~DtIt~lsls~~gs--~llsnsMd~tvrvwd~rp~~p~~R~v~if~g  260 (338)
T KOG0265|consen  185 TSDQVISGGIDNDIKVWDLRKN--DGLYTLSGHADTITGLSLSRYGS--FLLSNSMDNTVRVWDVRPFAPSQRCVKIFQG  260 (338)
T ss_pred             cccceeeccccCceeeeccccC--cceEEeecccCceeeEEeccCCC--ccccccccceEEEEEecccCCCCceEEEeec
Confidence            9999999999999999999876  66788899999999999999999  799999999999999987544433 333333


Q ss_pred             ccCCC--ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        392 LQRDN--YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       392 ~~~~~--~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      ..|.-  ....++|+|+++.+.+|+.|..+++||....  .....+++|.+.|++++|+|...+|.+++.|.+|++=++
T Consensus       261 ~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r--~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei  337 (338)
T KOG0265|consen  261 HIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSR--RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI  337 (338)
T ss_pred             chhhhhhhcceeeccCCCCccccccccceEEEeecccc--cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence            33333  3457899999999999999999999998754  567788999999999999999999999999999987543

>KOG0295|consensus

Probab=100.00  E-value=8.9e-40  Score=272.90  Aligned_cols=305  Identities=19%  Similarity=0.331  Sum_probs=262.3

Q ss_pred             CCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe
Q psy17188         99 GIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  177 (504)
Q Consensus        99 ~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  177 (504)
                      .+|+....-...+|...|+.+-|.|+--++++++ |.+|++||..+++....+.     +|.+.+..++|+..|++|+++
T Consensus        94 wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~Lr-----GHt~sv~di~~~a~Gk~l~tc  168 (406)
T KOG0295|consen   94 WIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLR-----GHTDSVFDISFDASGKYLATC  168 (406)
T ss_pred             cCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhh-----ccccceeEEEEecCccEEEec
Confidence            3454444444558999999999999999999887 9999999999986644444     899999999999999999999


Q ss_pred             cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      +.|-.+.+||.++. ......+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.++.++.+|...|..++.+.||
T Consensus       169 SsDl~~~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DG  247 (406)
T KOG0295|consen  169 SSDLSAKLWDFDTF-FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDG  247 (406)
T ss_pred             CCccchhheeHHHH-HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCe
Confidence            99999999999864 45567788999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ..+++++.|.+|++|-+.++++               ......|+.+|.+++|-|...+  ...                
T Consensus       248 ti~As~s~dqtl~vW~~~t~~~---------------k~~lR~hEh~vEci~wap~~~~--~~i----------------  294 (406)
T KOG0295|consen  248 TIIASCSNDQTLRVWVVATKQC---------------KAELREHEHPVECIAWAPESSY--PSI----------------  294 (406)
T ss_pred             eEEEecCCCceEEEEEeccchh---------------hhhhhccccceEEEEecccccC--cch----------------
Confidence            9999999999999999998865               3444567777888888775320  000                


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                                              ..++++.+                                    .++++.+++.|+
T Consensus       295 ------------------------~~at~~~~------------------------------------~~~~l~s~SrDk  314 (406)
T KOG0295|consen  295 ------------------------SEATGSTN------------------------------------GGQVLGSGSRDK  314 (406)
T ss_pred             ------------------------hhccCCCC------------------------------------CccEEEeecccc
Confidence                                    00111000                                    367899999999


Q ss_pred             cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEE
Q psy17188        418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW  497 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~  497 (504)
                      +|++||+.++  .+.+++.+|...|..++|+|.|+||+++.+|+++++||+++++++.++..|..-+++++|+.+-.+++
T Consensus       315 tIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~Vv  392 (406)
T KOG0295|consen  315 TIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVV  392 (406)
T ss_pred             eEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEE
Confidence            9999999977  56778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCC
Q psy17188        498 TGGLDNT  504 (504)
Q Consensus       498 s~s~Dgt  504 (504)
                      ||+-|.|
T Consensus       393 TGsVdqt  399 (406)
T KOG0295|consen  393 TGSVDQT  399 (406)
T ss_pred             eccccce
Confidence            9998864

>KOG0315|consensus

Probab=100.00  E-value=7.1e-39  Score=253.96  Aligned_cols=266  Identities=22%  Similarity=0.344  Sum_probs=229.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      -+|++++.|.+|++|...+|.+.++++-..+.|+.+.+.|+++.|++++. -.||+||++++..             .+.
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np-------------~Pv   76 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNP-------------NPV   76 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCC-------------Cce
Confidence            38999999999999999999999999977889999999999999988875 5799999998762             224


Q ss_pred             ceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVW  375 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~  375 (504)
                      .....|...|.++.|..+|+++++|++||+++|||++.....   ..-.+..+|.++..+|+..  -++++..+|.|++|
T Consensus        77 ~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~q---R~~~~~spVn~vvlhpnQt--eLis~dqsg~irvW  151 (311)
T KOG0315|consen   77 ATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQ---RNYQHNSPVNTVVLHPNQT--ELISGDQSGNIRVW  151 (311)
T ss_pred             eEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccc---hhccCCCCcceEEecCCcc--eEEeecCCCcEEEE
Confidence            556678888999999999999999999999999999985332   3334457999999999988  68999999999999


Q ss_pred             ecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC----cceeecccCCCCceeEEEECCCC
Q psy17188        376 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT----PRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       376 d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      |+........+..    .....|.++...|||.+|+.+...|..++|++-+..    ...+.++..|...+..+.+|||+
T Consensus       152 Dl~~~~c~~~liP----e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~  227 (311)
T KOG0315|consen  152 DLGENSCTHELIP----EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDV  227 (311)
T ss_pred             EccCCccccccCC----CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCC
Confidence            9987643333222    335678999999999999999999999999987643    23455678899999999999999


Q ss_pred             CEEEEeeCCCcEEEEEcCCc-ceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        452 KVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++||+++.|.+++||+.++. +....+++|...+++++||.||+||+|||.|++
T Consensus       228 k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~  281 (311)
T KOG0315|consen  228 KYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHT  281 (311)
T ss_pred             cEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCc
Confidence            99999999999999999988 677789999999999999999999999999974

>KOG0284|consensus

Probab=100.00  E-value=3.8e-40  Score=279.04  Aligned_cols=285  Identities=21%  Similarity=0.327  Sum_probs=247.8

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      -+.+|..|.|.|+|+.|++|+ .|.+.+|+..+-.     .......|+..|+++.|++++.++++|+.+|.|++|+...
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn-----FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm  169 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN-----FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM  169 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceee-----HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch
Confidence            356899999999999999999 8999999974321     1122237999999999999999999999999999999875


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      ...  ......|...|++++|+|+...+++++.||+|+|||....+....+.+|.-.|.+++|+|...+|++++.|..|+
T Consensus       170 nnV--k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK  247 (464)
T KOG0284|consen  170 NNV--KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK  247 (464)
T ss_pred             hhh--HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence            442  222334558899999999999999999999999999999999999999999999999999988999999999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  350 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~  350 (504)
                      +||.+++.+               ......|...|..+.|++++++|++++.|..++++|+++.  .....+.+|...+.
T Consensus       248 lWDprSg~c---------------l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~  310 (464)
T KOG0284|consen  248 LWDPRSGSC---------------LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVT  310 (464)
T ss_pred             eecCCCcch---------------hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhhe
Confidence            999999986               5667789999999999999999999999999999999954  56677888999999


Q ss_pred             eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ++.|+|-... +|.+++.|+.|..|.+........    ....|...|.+++|+|-|.+|++|+.|.++++|.-.
T Consensus       311 ~~~WhP~~~~-lftsgg~Dgsvvh~~v~~~~p~~~----i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  311 SLTWHPLNES-LFTSGGSDGSVVHWVVGLEEPLGE----IPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             eecccccccc-ceeeccCCCceEEEeccccccccC----CCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            9999998776 899999999999999874322222    234789999999999999999999999999999754

>KOG0285|consensus

Probab=100.00  E-value=1.4e-38  Score=265.18  Aligned_cols=287  Identities=21%  Similarity=0.363  Sum_probs=253.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      +|.+.|.|+++.|.++++++|+ |++|+|||+.++...     +.+.+|...|..+++|+...||++++.|+.|+.||++
T Consensus       149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-----ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe  223 (460)
T KOG0285|consen  149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-----LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE  223 (460)
T ss_pred             hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-----EeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence            8999999999999999999999 999999999987432     3334899999999999999999999999999999999


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      ..+  .+....+|-..|.|++..|.-+.|++|+.|.+++|||+++...+..+.+|..+|..+.+.|-...+++||.|++|
T Consensus       224 ~nk--vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tv  301 (460)
T KOG0285|consen  224 YNK--VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTV  301 (460)
T ss_pred             hhh--hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceE
Confidence            655  477789999999999999999999999999999999999999999999999999999999977789999999999


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ++||++.|+.               ......|...+.+++.+|....+++++.| .|+-|++..+  .....+.+|...+
T Consensus       302 rlWDl~agkt---------------~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g--~f~~nlsgh~~ii  363 (460)
T KOG0285|consen  302 RLWDLRAGKT---------------MITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG--EFLQNLSGHNAII  363 (460)
T ss_pred             EEeeeccCce---------------eEeeecccceeeEEecCCchhhhhccCCc-cceeccCCcc--chhhcccccccee
Confidence            9999999974               44556788889999999999989998876 6899999877  4555588999999


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc---cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV---SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ..++...|+   ++++|+.+|.+.+||.+.+-.....   ........+..|.+.+|...|..|+++..|.+|++|.-.
T Consensus       364 ntl~~nsD~---v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  364 NTLSVNSDG---VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             eeeeeccCc---eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            999999988   7999999999999999876543333   222333456779999999999999999999999999754

>KOG0296|consensus

Probab=100.00  E-value=9e-38  Score=261.10  Aligned_cols=336  Identities=16%  Similarity=0.252  Sum_probs=267.0

Q ss_pred             CccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeC
Q psy17188         63 ASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDI  141 (504)
Q Consensus        63 ~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~  141 (504)
                      ..+..|  ...|++++.+|+.+..+.+..++..++|.+..........+|++.|+++.||.+|.+||||+ +|.|+||+.
T Consensus        58 ~tF~~H--~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~  135 (399)
T KOG0296|consen   58 VTFDKH--TDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV  135 (399)
T ss_pred             eehhhc--CCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence            355566  78899999999989999999999999999887775555559999999999999999999999 999999999


Q ss_pred             CCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE
Q psy17188        142 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  221 (504)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  221 (504)
                      .++.....+.     +.-..|.=+.|+|.+..|+.|+.||.+.+|.+.++  .....+.+|..++++=.|.|+|+.++++
T Consensus       136 stg~~~~~~~-----~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~--~~~kv~~Gh~~~ct~G~f~pdGKr~~tg  208 (399)
T KOG0296|consen  136 STGGEQWKLD-----QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ--ALCKVMSGHNSPCTCGEFIPDGKRILTG  208 (399)
T ss_pred             ccCceEEEee-----cccCceEEEEecccccEEEeecCCCcEEEEECCCc--ceeeEecCCCCCcccccccCCCceEEEE
Confidence            9875444332     45667889999999999999999999999999874  3467788999999999999999999999


Q ss_pred             eCCCcEEEEECCCCeEEEeecCC-CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        222 CSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      ..||+|++||+.+++++..+.+- .....++.++..+..++.|+.++.+++-+..+|++........       ......
T Consensus       209 y~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~-------~~l~~~  281 (399)
T KOG0296|consen  209 YDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTV-------PELKPS  281 (399)
T ss_pred             ecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCC-------cccccc
Confidence            99999999999999999888743 3456788899999999999999999999999888654332100       000011


Q ss_pred             cCC---ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        301 RDN---YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       301 ~~~---~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      +..   .|.++.++..-.+.++|+-||+|.|||+...+                                          
T Consensus       282 ~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~------------------------------------------  319 (399)
T KOG0296|consen  282 QEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST------------------------------------------  319 (399)
T ss_pred             chhhhhhhhhcccccccchhhcccccceEEEEecccch------------------------------------------
Confidence            122   22333333333445555555555555554331                                          


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                          .+      ....|...|..+.|-+ ..+|++++.+|.|+.||.+++.  .+....+|...|.+++++|+.++++++
T Consensus       320 ----~R------~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~--l~~~y~GH~~~Il~f~ls~~~~~vvT~  386 (399)
T KOG0296|consen  320 ----LR------HICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQ--LKFTYTGHQMGILDFALSPQKRLVVTV  386 (399)
T ss_pred             ----hh------eeccCCCceEEEEEcC-cchheeeccCceEEeeeccccc--eEEEEecCchheeEEEEcCCCcEEEEe
Confidence                11      1124566788999998 6799999999999999999885  456678999999999999999999999


Q ss_pred             eCCCcEEEEEcC
Q psy17188        458 CSDGNIAVWDLH  469 (504)
Q Consensus       458 ~~dg~i~iwd~~  469 (504)
                      +.|++.+||++.
T Consensus       387 s~D~~a~VF~v~  398 (399)
T KOG0296|consen  387 SDDNTALVFEVP  398 (399)
T ss_pred             cCCCeEEEEecC
Confidence            999999999874

>KOG0273|consensus

Probab=100.00  E-value=1.2e-37  Score=268.71  Aligned_cols=321  Identities=17%  Similarity=0.257  Sum_probs=267.4

Q ss_pred             CCcceEEEECCCCC-cccCCCCCCcccCCCCCccc-------cce-------eeecCCCcEEEEEEcCCCcEEEEec-CC
Q psy17188         71 GKPAYSYHVTTDGQ-MQPVPFPPDALIGPGIPRHA-------RQI-------NTLSHGEVVCAVTISNPTKYVYTGG-KG  134 (504)
Q Consensus        71 ~~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~h~~~V~~v~~s~~~~~l~~~~-d~  134 (504)
                      ...|.+.+|.|-.+ +++....+-....|.+..+.       ...       +.......|++++|+.+|.+||+|. ||
T Consensus       178 ~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G  257 (524)
T KOG0273|consen  178 ESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDG  257 (524)
T ss_pred             CCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCc
Confidence            56789999998775 66666666666666665311       111       1112346799999999999999999 99


Q ss_pred             eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC
Q psy17188        135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  214 (504)
Q Consensus       135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~  214 (504)
                      .++||+....      ....+..|+++|.++.|+.+|+||++++.|+++.+||..+++.  ...+..|..+-..+.|-.+
T Consensus       258 ~~riw~~~G~------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~--~q~f~~~s~~~lDVdW~~~  329 (524)
T KOG0273|consen  258 EARIWNKDGN------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV--KQQFEFHSAPALDVDWQSN  329 (524)
T ss_pred             EEEEEecCch------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE--EEeeeeccCCccceEEecC
Confidence            9999997653      2223347999999999999999999999999999999987765  4555667666677888754


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188        215 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS  294 (504)
Q Consensus       215 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~  294 (504)
                       ..+++++.|+.|+|+.+....++.++.+|.+.|.++.|+|.+.+|++++.|+++++|.......               
T Consensus       330 -~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~---------------  393 (524)
T KOG0273|consen  330 -DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNS---------------  393 (524)
T ss_pred             -ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcc---------------
Confidence             4789999999999999999999999999999999999999999999999999999999876653               


Q ss_pred             cceecccCCceEEEEEcCCC---------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        295 QLDCLQRDNYIRSVKLLPDG---------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       295 ~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                      ......|...|..+.|+|.|         ..+++++.|+++++||+..+  .....+..|..+|.+++|+|+++  ++++
T Consensus       394 ~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~--ylAs  469 (524)
T KOG0273|consen  394 VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGR--YLAS  469 (524)
T ss_pred             hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCc--EEEe
Confidence            44556788899999999954         47899999999999999988  66777889999999999999999  8999


Q ss_pred             ccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       366 ~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      |+.|+.|.+|+.+....      .......+.|..++|+.+|.+|..+-.|+.+++.|++
T Consensus       470 Gs~dg~V~iws~~~~~l------~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  470 GSLDGCVHIWSTKTGKL------VKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             cCCCCeeEeccccchhe------eEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            99999999999987643      3333557779999999999999999999999999875

>KOG1063|consensus

Probab=100.00  E-value=1e-37  Score=281.43  Aligned_cols=454  Identities=17%  Similarity=0.192  Sum_probs=329.4

Q ss_pred             CCCCCCCCC-CCccccCCCcCcccCCCCCccCCCCCCCcceEEEECCCCC---cccCCCCCCcccCCCCC-ccccceeee
Q psy17188         36 PPSLNAYPR-PPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQ---MQPVPFPPDALIGPGIP-RHARQINTL  110 (504)
Q Consensus        36 ~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~~~~~~~~~~~~~~~~~-~~~~~~~~~  110 (504)
                      |.++.+||. +.++.++|...    .....+.||  .++|.|+.+-|..+   ....+..|+.+++|.+. .....+..+
T Consensus        24 ~~~~vafGa~~~Iav~dp~k~----~i~t~l~GH--~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~   97 (764)
T KOG1063|consen   24 PGGLVAFGAGPAIAVADPEKI----LIVTTLDGH--VARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTI   97 (764)
T ss_pred             ccceEEecCCceEEEeCcccc----eeEEeccCC--ccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEee
Confidence            344557774 45677888765    233467788  88999999998876   45566677788888876 445666777


Q ss_pred             -cCCCcEEEEEEcCCCcEEEE-ecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCC-EEEEecCCCcEEEE
Q psy17188        111 -SHGEVVCAVTISNPTKYVYT-GGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGR-TLIVGGEASNLSIW  186 (504)
Q Consensus       111 -~h~~~V~~v~~s~~~~~l~~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~-~l~~~~~dg~i~iw  186 (504)
                       +|...+.|+  ........+ ++|+.+.+||.+..+ ......+........-.|+++.+ ++. .++.|+.+..|.++
T Consensus        98 ~g~~~~~~cv--~a~~~~~~~~~ad~~v~vw~~~~~e-~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~  174 (764)
T KOG1063|consen   98 QGHCKECVCV--VARSSVMTCKAADGTVSVWDKQQDE-VFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLY  174 (764)
T ss_pred             cCcceeEEEE--EeeeeEEEeeccCceEEEeecCCCc-eeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEe
Confidence             445555554  433333333 359999999985432 11222222222233345666666 333 45667788888999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCC---CEEEEEeCCCcEEEEECCCCe---------------------EE----
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQT---------------------LV----  238 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~---------------------~~----  238 (504)
                      .-...+......+.+|.+.|.+++|...+   -+|+++++|..|+||.+.-+.                     ..    
T Consensus       175 s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~  254 (764)
T KOG1063|consen  175 SSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQ  254 (764)
T ss_pred             ccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEE
Confidence            87777778889999999999999998744   389999999999999874221                     11    


Q ss_pred             ------EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC-----------------------------------
Q psy17188        239 ------RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-----------------------------------  277 (504)
Q Consensus       239 ------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-----------------------------------  277 (504)
                            ..+.||++.|.++.|+|.+..|++++.|.++.+|...+.                                   
T Consensus       255 ~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~  334 (764)
T KOG1063|consen  255 YRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAH  334 (764)
T ss_pred             EEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEe
Confidence                  123489999999999999999999999999999987643                                   


Q ss_pred             ----ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CccceeeeccCCCceee
Q psy17188        278 ----CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--TPRIKAELTSSAPACYA  351 (504)
Q Consensus       278 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~~i~~  351 (504)
                          ..+.|.  ..............+|...|++++|+|.|++|++.+.|.+-++|-.-..  +.......+.|...+.+
T Consensus       335 g~~Gg~hlWk--t~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c  412 (764)
T KOG1063|consen  335 GRTGGFHLWK--TKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTC  412 (764)
T ss_pred             cccCcEEEEe--ccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeeccccccccccee
Confidence                233443  1111222234445678899999999999999999999999999865421  23445556678889999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCC-------------------------------------------CC-----C
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQP-------------------------------------------GS-----K  383 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-------------------------------------------~~-----~  383 (504)
                      +++-+..-  .|+++..+..+|+|+....                                           ..     .
T Consensus       413 ~~~vn~~~--~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~e  490 (764)
T KOG1063|consen  413 LSFVNEDL--QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAE  490 (764)
T ss_pred             eehccCCc--eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeee
Confidence            99988522  6999999999999985310                                           00     0


Q ss_pred             Cc-----------------------ccccccccCCCceEEEEEcCCCCEEEEeeCCC-----cEEEeeCCCCCcceeecc
Q psy17188        384 TP-----------------------VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       384 ~~-----------------------~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~  435 (504)
                      .+                       ....+..+|...|.+++.+|+|+++|+++...     .|++|+..+...  ...+
T Consensus       491 t~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~--~~~L  568 (764)
T KOG1063|consen  491 TPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQ--VQEL  568 (764)
T ss_pred             cccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhh--hhee
Confidence            00                       00111234788899999999999999998754     399999887644  4467


Q ss_pred             cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce----EEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..|...|+.++||||+++|++.+.|.++.+|+......    ....+.|+..|++++|+||+.+++|+|.|++
T Consensus       569 ~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~  641 (764)
T KOG1063|consen  569 EGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKK  641 (764)
T ss_pred             cccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCce
Confidence            88999999999999999999999999999999755422    2346789999999999999999999999975

>KOG0645|consensus

Probab=100.00  E-value=2.1e-36  Score=243.02  Aligned_cols=289  Identities=17%  Similarity=0.263  Sum_probs=240.6

Q ss_pred             ecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCC-ccceeee-ecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        155 CLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPT-PRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      ..+|.+.+..++|+|- |..||+++.|+.|++|+...+. ...+..+ .+|...|..++|+|.|++|++++.|.++.||.
T Consensus        10 ~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~   89 (312)
T KOG0645|consen   10 LSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWK   89 (312)
T ss_pred             ecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEee
Confidence            3488999999999997 8999999999999999998422 2222222 47999999999999999999999999999998


Q ss_pred             CCCC--eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        232 LHNQ--TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       232 ~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      -..+  +++.++.||.+.|.|++|+++|++||++++|+.|-+|.+..+. ...             .-....|...|..+
T Consensus        90 k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec-------------~aVL~~HtqDVK~V  156 (312)
T KOG0645|consen   90 KEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFEC-------------IAVLQEHTQDVKHV  156 (312)
T ss_pred             cCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEE-------------EeeeccccccccEE
Confidence            6643  7889999999999999999999999999999999999988543 111             22345688889999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCC-CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      .|+|...+|++++.|.+|++|+-. .........+.+|...+.+++|.+.|.  .+++++.|++++||.....-      
T Consensus       157 ~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~--rl~s~sdD~tv~Iw~~~~~~------  228 (312)
T KOG0645|consen  157 IWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS--RLVSCSDDGTVSIWRLYTDL------  228 (312)
T ss_pred             EEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc--eEEEecCCcceEeeeeccCc------
Confidence            999999999999999999999887 667788889999999999999999997  69999999999999865211      


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC--cc---eeecccCCCCceeEEEECCC-CCEEEEeeCCC
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT--PR---IKAELTSSAPACYALAISPD-SKVCFSCCSDG  461 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~--~~---~~~~~~~~~~~v~~l~~s~~-~~~l~s~~~dg  461 (504)
                         ...|...+..++|.  ...|++++.|+.|++|.-...-  +.   .......|...|++++|.|. .++|++++.||
T Consensus       229 ---~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG  303 (312)
T KOG0645|consen  229 ---SGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDG  303 (312)
T ss_pred             ---chhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCc
Confidence               12356778889998  4579999999999999866421  11   11234567889999999994 78999999999


Q ss_pred             cEEEEEcC
Q psy17188        462 NIAVWDLH  469 (504)
Q Consensus       462 ~i~iwd~~  469 (504)
                      .|++|.+.
T Consensus       304 ~v~~W~l~  311 (312)
T KOG0645|consen  304 IVNFWELE  311 (312)
T ss_pred             eEEEEEec
Confidence            99999874

>KOG0284|consensus

Probab=100.00  E-value=1.2e-38  Score=269.90  Aligned_cols=284  Identities=18%  Similarity=0.302  Sum_probs=244.8

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      ..+..|..+.|.|+|+.|++|+..|.+.+|+...-  .....+..|...|.++.|++++.++++|+.+|.|++|+..-. 
T Consensus        94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f--nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-  170 (464)
T KOG0284|consen   94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF--NFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-  170 (464)
T ss_pred             ccccceeeEEEcCCCceeEeecccccEEEecCcee--eHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-
Confidence            45678999999999999999999999999998643  345667899999999999999999999999999999997644 


Q ss_pred             EEEeecCC-CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        237 LVRQFQGH-TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       237 ~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      .++.++.| ...|++++|+|+...+++++.||+|+|||....+-               .....+|.-.|.++.|+|...
T Consensus       171 nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~ke---------------e~vL~GHgwdVksvdWHP~kg  235 (464)
T KOG0284|consen  171 NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKE---------------ERVLRGHGWDVKSVDWHPTKG  235 (464)
T ss_pred             hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCch---------------hheeccCCCCcceeccCCccc
Confidence            44555555 49999999999999999999999999999987652               344478888999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      .+++++.|..|++||.+++  .....+..|...|..+.|.++++  ++++++.|..++++|++..+.     ......|.
T Consensus       236 LiasgskDnlVKlWDprSg--~cl~tlh~HKntVl~~~f~~n~N--~Llt~skD~~~kv~DiR~mkE-----l~~~r~Hk  306 (464)
T KOG0284|consen  236 LIASGSKDNLVKLWDPRSG--SCLATLHGHKNTVLAVKFNPNGN--WLLTGSKDQSCKVFDIRTMKE-----LFTYRGHK  306 (464)
T ss_pred             eeEEccCCceeEeecCCCc--chhhhhhhccceEEEEEEcCCCC--eeEEccCCceEEEEehhHhHH-----HHHhhcch
Confidence            9999999999999999988  55667888999999999999996  899999999999999985322     22334688


Q ss_pred             CceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        396 NYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       396 ~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      ..++++.|+| ...+|.+|+.||.|..|.+...+++. ....+|...|++++|+|-|.+|++|+.|.++++|.-
T Consensus       307 kdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~-~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  307 KDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLG-EIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             hhheeeccccccccceeeccCCCceEEEecccccccc-CCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence            9999999999 55688899999999999998544433 335678899999999999999999999999999964

>KOG1408|consensus

Probab=100.00  E-value=1.3e-36  Score=275.11  Aligned_cols=441  Identities=15%  Similarity=0.164  Sum_probs=328.6

Q ss_pred             ccccCCCcCcccCCCCC--------ccCCCC-------CCCcceEEEECCCCC-cccCCCCCCcccCCCCCccccceeee
Q psy17188         47 LVGYDPHSQMRAPLGPA--------SLAGIP-------GGKPAYSYHVTTDGQ-MQPVPFPPDALIGPGIPRHARQINTL  110 (504)
Q Consensus        47 ~~~~~p~~~~~~~~~~~--------~~~~~~-------~~~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (504)
                      .|+|+|+|.|.+.+...        .++.|.       .+-.|.+++|+|.++ +..++++.|.++-.+.-+.......-
T Consensus        83 ~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asn  162 (1080)
T KOG1408|consen   83 CVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASN  162 (1080)
T ss_pred             EEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhccccccc
Confidence            38999999998766511        222221       134689999999985 55688888877643322222222333


Q ss_pred             cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC-ce-----------------------------ee--eeecC-
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT-PV-----------------------------SQ--LDCLQ-  157 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~-~~-----------------------------~~--~~~~~-  157 (504)
                      .-...|.+++|+.||.|+++.+...|++|.++.+.... ++                             ..  +...+ 
T Consensus       163 kiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGh  242 (1080)
T KOG1408|consen  163 KISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGH  242 (1080)
T ss_pred             ccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccc
Confidence            34678999999999999999999999999886532000 00                             00  00000 


Q ss_pred             ---------------------------------------------------------C----------------------
Q psy17188        158 ---------------------------------------------------------R----------------------  158 (504)
Q Consensus       158 ---------------------------------------------------------~----------------------  158 (504)
                                                                               |                      
T Consensus       243 LvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a  322 (1080)
T KOG1408|consen  243 LVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPA  322 (1080)
T ss_pred             eeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcc
Confidence                                                                     0                      


Q ss_pred             -CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc-ceeeeecCcCceEEEEECCC-----------CCEEEEEeCCC
Q psy17188        159 -DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-IKAELTSSAPACYALAISPD-----------SKVCFSCCSDG  225 (504)
Q Consensus       159 -~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~-----------~~~l~~~~~dg  225 (504)
                       --...++.|++....|.+.-.|..++|||+++.+.. ....+-.|...|+.+.--|-           ...+++++.|+
T Consensus       323 ~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~  402 (1080)
T KOG1408|consen  323 IFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDG  402 (1080)
T ss_pred             cCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCC
Confidence             001226677887788888888999999999875432 23345567777877765441           12588999999


Q ss_pred             cEEEEECCCCeEEEe-------------------------------------ecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188        226 NIAVWDLHNQTLVRQ-------------------------------------FQGHTDGASCIDISADGTKLWTGGLDNT  268 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~-------------------------------------~~~h~~~v~~~~~~~~~~~l~s~~~dg~  268 (504)
                      +|++||++.+..-..                                     .-+....+.+++.+|+|++|++|..-|+
T Consensus       403 TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~Gn  482 (1080)
T KOG1408|consen  403 TIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGN  482 (1080)
T ss_pred             cEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCc
Confidence            999999975311000                                     0113357899999999999999999999


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      +++|++..-+.               ......|+..|.++.|+.   ..++|++++.|..|++||+... ......+.+|
T Consensus       483 lrVy~Lq~l~~---------------~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn-y~l~qtld~H  546 (1080)
T KOG1408|consen  483 LRVYDLQELEY---------------TCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN-YDLVQTLDGH  546 (1080)
T ss_pred             eEEEEehhhhh---------------hhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc-cchhhhhccc
Confidence            99999987653               445567899999999986   3478999999999999999764 4667788999


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ...|+++.|.-++-...+++++.|..|.+--.+.......+...........+..++..|..+++++++.|..|+|||+.
T Consensus       547 SssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~  626 (1080)
T KOG1408|consen  547 SSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIE  626 (1080)
T ss_pred             ccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecc
Confidence            99999999999887668889988887765444322222222222222235568899999999999999999999999999


Q ss_pred             CCCcceeecc-cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        426 SPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       426 ~~~~~~~~~~-~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +++....++. .+|.+....+...|.|.|||+.+.|+++.++|+.+|+++.+..+|...|+.+.|++|-++|++++.||
T Consensus       627 sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDg  705 (1080)
T KOG1408|consen  627 SGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDG  705 (1080)
T ss_pred             ccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCc
Confidence            9987766654 35567788899999999999999999999999999999999999999999999999999999999997

>KOG0282|consensus

Probab=100.00  E-value=7.2e-38  Score=271.08  Aligned_cols=293  Identities=19%  Similarity=0.434  Sum_probs=253.0

Q ss_pred             eeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        153 LDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       153 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      ....+|...|+++.|.| .+.+|++++.|+.|+||++.. .......+.+|..+|.+++|+++|..+++++.|+.|++||
T Consensus       208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~-~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD  286 (503)
T KOG0282|consen  208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD  286 (503)
T ss_pred             eeccCCccccchhhhccceeeEEEecCCCceEEEEEEec-CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence            44558999999999999 899999999999999999987 3456788999999999999999999999999999999999


Q ss_pred             CCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        232 LHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       232 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      +++|+++..+. -...++|+.|+|++ +.+++|+.|+.|+.||++++++               ......|-+.|..+.|
T Consensus       287 tETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kv---------------vqeYd~hLg~i~~i~F  350 (503)
T KOG0282|consen  287 TETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKV---------------VQEYDRHLGAILDITF  350 (503)
T ss_pred             cccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHH---------------HHHHHhhhhheeeeEE
Confidence            99999999987 56778999999988 8999999999999999999985               4455667888999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188        311 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD  390 (504)
Q Consensus       311 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~  390 (504)
                      -++|+++++.+.|+.+++|+.+.+-.. ..........+.++..+|+++  +++.-+.++.|.+|.+...-.......+.
T Consensus       351 ~~~g~rFissSDdks~riWe~~~~v~i-k~i~~~~~hsmP~~~~~P~~~--~~~aQs~dN~i~ifs~~~~~r~nkkK~fe  427 (503)
T KOG0282|consen  351 VDEGRRFISSSDDKSVRIWENRIPVPI-KNIADPEMHTMPCLTLHPNGK--WFAAQSMDNYIAIFSTVPPFRLNKKKRFE  427 (503)
T ss_pred             ccCCceEeeeccCccEEEEEcCCCccc-hhhcchhhccCcceecCCCCC--eehhhccCceEEEEecccccccCHhhhhc
Confidence            999999999999999999999876422 222333344678899999999  89999999999999987665555555555


Q ss_pred             cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC-CCEEEEeeCCCcEEEEE
Q psy17188        391 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd  467 (504)
                      .....+.-..+.|||||++|++|+.||.+.+||.++-+  ....+..|...+..+.|+|. ...+|+++.||.|++||
T Consensus       428 Gh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k--l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  428 GHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK--LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             ceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh--hhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            55566778899999999999999999999999999764  34556778899999999995 45889999999999996

>KOG0265|consensus

Probab=100.00  E-value=6.5e-37  Score=249.49  Aligned_cols=285  Identities=18%  Similarity=0.287  Sum_probs=238.7

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....+.+|++.|+.+.|+|+|.+|++|+.|..|.+|++. ..+....+++|.+.|..+.|.+|++.|++++.|.+++.||
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD  118 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD  118 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence            355678999999999999999999999999999999954 4466778889999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      .++|+.               ......|...+.++.-+.-|. ++.+++.|+++++||+++.......   ....+++++
T Consensus       119 ~~tG~~---------------~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~---~~kyqltAv  180 (338)
T KOG0265|consen  119 AETGKR---------------IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF---ENKYQLTAV  180 (338)
T ss_pred             ccccee---------------eehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc---ccceeEEEE
Confidence            999985               455567788888888555554 5567889999999999976443322   233488999


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc---
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP---  429 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~---  429 (504)
                      .|..++.  -+.+++-|+.|++||++.....     ....+|...|+.+..+++|.++.+-+.|.++++||++...+   
T Consensus       181 ~f~d~s~--qv~sggIdn~ikvWd~r~~d~~-----~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R  253 (338)
T KOG0265|consen  181 GFKDTSD--QVISGGIDNDIKVWDLRKNDGL-----YTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR  253 (338)
T ss_pred             Eeccccc--ceeeccccCceeeeccccCcce-----EEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCc
Confidence            9998888  6899999999999999765432     23347899999999999999999999999999999975322   


Q ss_pred             -ceeecccCCC--CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        430 -RIKAELTSSA--PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       430 -~~~~~~~~~~--~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                       +.+.....|.  .....++|+|+++.+.+|+.|..+++||......+..+.+|.+.|++++|+|...+|.+++.|+|
T Consensus       254 ~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~  331 (338)
T KOG0265|consen  254 CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKT  331 (338)
T ss_pred             eEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCce
Confidence             2222222222  23456799999999999999999999999999999999999999999999999999999999986

>KOG0263|consensus

Probab=100.00  E-value=4.7e-37  Score=281.93  Aligned_cols=249  Identities=20%  Similarity=0.386  Sum_probs=222.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCC--------------------------CCCceeeeeecCCCCceE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPG--------------------------SKTPVSQLDCLQRDNYIR  163 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~--------------------------~~~~~~~~~~~~~~~~v~  163 (504)
                      .....++|..|++|+.+||.|- |..|++|.+....                          ...........+|.++|.
T Consensus       376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy  455 (707)
T KOG0263|consen  376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY  455 (707)
T ss_pred             EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence            5567899999999999999988 9999999987411                          001112223558999999


Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  243 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  243 (504)
                      .+.|+|+.++|+++++|+++++|.+.+...  .....+|..+|+++.|+|.|-++|+++.|++.++|.......++.+.+
T Consensus       456 g~sFsPd~rfLlScSED~svRLWsl~t~s~--~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifag  533 (707)
T KOG0263|consen  456 GCSFSPDRRFLLSCSEDSSVRLWSLDTWSC--LVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAG  533 (707)
T ss_pred             eeeecccccceeeccCCcceeeeeccccee--EEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcc
Confidence            999999999999999999999999997654  566779999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        244 HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      |.+.|.|+.|+|+.+++++||.|.++|+||..+|..               .....+|.++|.+++|+|+|++|++|+.|
T Consensus       534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~---------------VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed  598 (707)
T KOG0263|consen  534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS---------------VRIFTGHKGPVTALAFSPCGRYLASGDED  598 (707)
T ss_pred             cccccceEEECCcccccccCCCCceEEEEEcCCCcE---------------EEEecCCCCceEEEEEcCCCceEeecccC
Confidence            999999999999999999999999999999999875               33446799999999999999999999999


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      |.|.+||+.++  .....+.+|.+.+.++.|+.+|.  ++++++.|..|++||+...
T Consensus       599 ~~I~iWDl~~~--~~v~~l~~Ht~ti~SlsFS~dg~--vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  599 GLIKIWDLANG--SLVKQLKGHTGTIYSLSFSRDGN--VLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             CcEEEEEcCCC--cchhhhhcccCceeEEEEecCCC--EEEecCCCCeEEEEEchhh
Confidence            99999999987  55667778899999999999999  8999999999999998764

>KOG0293|consensus

Probab=100.00  E-value=5.7e-37  Score=260.15  Aligned_cols=292  Identities=19%  Similarity=0.320  Sum_probs=236.4

Q ss_pred             eee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        108 NTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       108 ~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      +.+ .|.+.|.-+.||++|++||+++ |.+..+|++......+...  .+.+|..+|..+.||||.++|++++.|..+.+
T Consensus       218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~--tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l  295 (519)
T KOG0293|consen  218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKK--TLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL  295 (519)
T ss_pred             hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeee--eeecccCceEEEEECCCCCeEEecCchHheee
Confidence            344 7999999999999999999999 9999999987755433333  44589999999999999999999999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC-CCCeEEEEEccCCCEEEEEc
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~  264 (504)
                      ||+.++.......- ++...+.+++|.|||..+++|+.|+.+..||++. ......++- ...|.+++..+||+++++.+
T Consensus       296 wDv~tgd~~~~y~~-~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~  373 (519)
T KOG0293|consen  296 WDVDTGDLRHLYPS-GLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVT  373 (519)
T ss_pred             ccCCcchhhhhccc-CcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCcEEEEEe
Confidence            99999876544332 3567899999999999999999999999999864 444444443 35689999999999999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .|..|++++.++..                .........+|++++.|.+++++++.-.+..+++||++..  .......+
T Consensus       374 ~d~~i~l~~~e~~~----------------dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~--~lv~kY~G  435 (519)
T KOG0293|consen  374 VDKKIRLYNREARV----------------DRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN--KLVRKYFG  435 (519)
T ss_pred             cccceeeechhhhh----------------hhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh--hHHHHhhc
Confidence            99999999988754                3334556778999999999999999999999999999854  44444444


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEee
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd  423 (504)
                      |...                                               ..+..-+|-- +..++++|++|+.|+||+
T Consensus       436 hkq~-----------------------------------------------~fiIrSCFgg~~~~fiaSGSED~kvyIWh  468 (519)
T KOG0293|consen  436 HKQG-----------------------------------------------HFIIRSCFGGGNDKFIASGSEDSKVYIWH  468 (519)
T ss_pred             cccc-----------------------------------------------ceEEEeccCCCCcceEEecCCCceEEEEE
Confidence            4321                                               1111233332 457999999999999999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCC
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ..++++  ...+.+|...|++++|+| +..++|+|++||+||||....
T Consensus       469 r~sgkl--l~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  469 RISGKL--LAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             ccCCce--eEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            998854  556789999999999999 567899999999999998753

>KOG0285|consensus

Probab=100.00  E-value=1.3e-36  Score=253.44  Aligned_cols=285  Identities=24%  Similarity=0.439  Sum_probs=247.5

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +|.++|.|+++.|.+.++++|+.|+++.|||+.+++  +...+.+|...|..+++|+-..||++++.|+.|+.||++..+
T Consensus       149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk  226 (460)
T KOG0285|consen  149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK  226 (460)
T ss_pred             hccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh
Confidence            799999999999999999999999999999999876  477899999999999999999999999999999999999999


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .++.+.+|-..|.|++.+|.-..|++|+.|.++++||+++...               .....+|...|.++.+.|-...
T Consensus       227 vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~---------------V~~l~GH~~~V~~V~~~~~dpq  291 (460)
T KOG0285|consen  227 VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS---------------VHVLSGHTNPVASVMCQPTDPQ  291 (460)
T ss_pred             hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce---------------EEEecCCCCcceeEEeecCCCc
Confidence            9999999999999999999888999999999999999998753               4555679999999999998888


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.|++|++||+..+  +....+..|...+.+++.+|...  .|++++.| .|+-|++..+.....     ...|..
T Consensus       292 vit~S~D~tvrlWDl~ag--kt~~tlt~hkksvral~lhP~e~--~fASas~d-nik~w~~p~g~f~~n-----lsgh~~  361 (460)
T KOG0285|consen  292 VITGSHDSTVRLWDLRAG--KTMITLTHHKKSVRALCLHPKEN--LFASASPD-NIKQWKLPEGEFLQN-----LSGHNA  361 (460)
T ss_pred             eEEecCCceEEEeeeccC--ceeEeeecccceeeEEecCCchh--hhhccCCc-cceeccCCccchhhc-----cccccc
Confidence            999999999999999988  55667778888999999999887  67777655 588899876543332     346788


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec---cc---CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE---LT---SSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~---~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .|++++...|+ ++++|+++|.+.+||.+++-......   ..   .....|.+.+|...|..|++|..|.+|++|.-.
T Consensus       362 iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  362 IINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             eeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            89999999886 78899999999999999875433221   11   123458889999999999999999999999754

>KOG0263|consensus

Probab=100.00  E-value=7.6e-37  Score=280.57  Aligned_cols=304  Identities=19%  Similarity=0.290  Sum_probs=253.1

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .-...++|..|++|+.+||.|..|..|++|.+...+   ...++..       .+-   ..+=+.+.|-.+.+.|-.+..
T Consensus       376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~k---l~~lk~~-------~~l---~~~d~~sad~~~~~~D~~~~~  442 (707)
T KOG0263|consen  376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKK---LKKLKDA-------SDL---SNIDTESADVDVDMLDDDSSG  442 (707)
T ss_pred             EcCCcceeEeecCCcchhhccccccEEEEEecchhh---hccccch-------hhh---ccccccccchhhhhccccCCc
Confidence            445679999999999999999999999999997543   2222221       111   122244555557788888888


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      ...++.+|.++|....|+|+.++|+++|.|+++|+|.+.+...               .....+|..+|..+.|+|.|-+
T Consensus       443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~---------------~V~y~GH~~PVwdV~F~P~GyY  507 (707)
T KOG0263|consen  443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSC---------------LVIYKGHLAPVWDVQFAPRGYY  507 (707)
T ss_pred             eeEEeecCCCceeeeeecccccceeeccCCcceeeeeccccee---------------EEEecCCCcceeeEEecCCceE
Confidence            8888999999999999999999999999999999999999875               4455689999999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.|++.++|.....  .....+.+|...+.|+.|+|+..  ++++|+.|.++|+||+.++.....+     .+|..
T Consensus       508 Fatas~D~tArLWs~d~~--~PlRifaghlsDV~cv~FHPNs~--Y~aTGSsD~tVRlWDv~~G~~VRiF-----~GH~~  578 (707)
T KOG0263|consen  508 FATASHDQTARLWSTDHN--KPLRIFAGHLSDVDCVSFHPNSN--YVATGSSDRTVRLWDVSTGNSVRIF-----TGHKG  578 (707)
T ss_pred             EEecCCCceeeeeecccC--CchhhhcccccccceEEECCccc--ccccCCCCceEEEEEcCCCcEEEEe-----cCCCC
Confidence            999999999999998875  55667788999999999999999  8999999999999999987653333     46999


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc----
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----  472 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~----  472 (504)
                      +|.+++|||+|++|++|+.||.|.+||+.+++.  ...+.+|.+.|.++.|+.||..||+|+.|.+|++||+..-.    
T Consensus       579 ~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~--v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~  656 (707)
T KOG0263|consen  579 PVTALAFSPCGRYLASGDEDGLIKIWDLANGSL--VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLN  656 (707)
T ss_pred             ceEEEEEcCCCceEeecccCCcEEEEEcCCCcc--hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccccc
Confidence            999999999999999999999999999998765  44566779999999999999999999999999999985321    


Q ss_pred             --------------------eEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        473 --------------------LVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       473 --------------------~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                                          ++..+..-..+|..+.|.-....|+.|
T Consensus       657 ~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g  703 (707)
T KOG0263|consen  657 LGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG  703 (707)
T ss_pred             ccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence                                345555666789999998766555554

>KOG0316|consensus

Probab=100.00  E-value=3e-36  Score=237.17  Aligned_cols=280  Identities=18%  Similarity=0.258  Sum_probs=249.1

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      ...+..+.++|.++.|+-||++.++++.|.+|++|+...+.+++++.+|...|..++.+.|+..+++++.|..+.+||+.
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~   89 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN   89 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence            45578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      +|++               .....+|...|+.+.|+.+...+++|+.|..+++||.++....+.+.+......|.++.++
T Consensus        90 TGkv---------------~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~  154 (307)
T KOG0316|consen   90 TGKV---------------DRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA  154 (307)
T ss_pred             cCee---------------eeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec
Confidence            9986               5667789999999999999999999999999999999999888888888888889999887


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      ..    .+++|+.||+++.||++.+....       ..-..+|++++|++|++..++++.|+++++.|-.+++.+.....
T Consensus       155 ~h----eIvaGS~DGtvRtydiR~G~l~s-------Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG  223 (307)
T KOG0316|consen  155 EH----EIVAGSVDGTVRTYDIRKGTLSS-------DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG  223 (307)
T ss_pred             cc----EEEeeccCCcEEEEEeecceeeh-------hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc
Confidence            66    69999999999999999764322       23467899999999999999999999999999999987666554


Q ss_pred             cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCCEEEEecC
Q psy17188        436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTKLWTGGL  501 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~~l~s~s~  501 (504)
                      .....--..++++.....+++|++||.|++||+.+...+..+..|... |.+++++|.-..|+++..
T Consensus       224 hkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~  290 (307)
T KOG0316|consen  224 HKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG  290 (307)
T ss_pred             cccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC
Confidence            444444456688888899999999999999999999999999988777 899999998777777654

>KOG0282|consensus

Probab=100.00  E-value=9.2e-38  Score=270.42  Aligned_cols=285  Identities=21%  Similarity=0.394  Sum_probs=245.8

Q ss_pred             ceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCC-CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        195 IKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ....+.+|...|+++.|.| .+.+|++++.|+.|+||++.. +++++++.+|..+|..++|+++|..+++++.|+.|++|
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlw  285 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLW  285 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeee
Confidence            4677889999999999999 888999999999999999987 89999999999999999999999999999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  351 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~  351 (504)
                      |+++|++                .........+.++.|+|++ +.+++|+.|+.|+.||++++  ....+...|-+.+..
T Consensus       286 DtETG~~----------------~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~--kvvqeYd~hLg~i~~  347 (503)
T KOG0282|consen  286 DTETGQV----------------LSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSG--KVVQEYDRHLGAILD  347 (503)
T ss_pred             ccccceE----------------EEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccch--HHHHHHHhhhhheee
Confidence            9999984                4445566778999999988 88999999999999999998  577788889999999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      +.|-++++  .+++.+.|+.++||+.+.+...+.....    ......++..+|++.++++-+.|+.|.+|.+...-...
T Consensus       348 i~F~~~g~--rFissSDdks~riWe~~~~v~ik~i~~~----~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~n  421 (503)
T KOG0282|consen  348 ITFVDEGR--RFISSSDDKSVRIWENRIPVPIKNIADP----EMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLN  421 (503)
T ss_pred             eEEccCCc--eEeeeccCccEEEEEcCCCccchhhcch----hhccCcceecCCCCCeehhhccCceEEEEecccccccC
Confidence            99999999  7999999999999999876544433322    22234589999999999999999999999875432211


Q ss_pred             -eecccCC--CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccC-CCEEEEecCCC
Q psy17188        432 -KAELTSS--APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDN  503 (504)
Q Consensus       432 -~~~~~~~--~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d-~~~l~s~s~Dg  503 (504)
                       ...+.+|  .+--..+.|||||++|++|+.||.+.+||.++-+++..++.|...+..+.|+|. ...+||+|.||
T Consensus       422 kkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G  497 (503)
T KOG0282|consen  422 KKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDG  497 (503)
T ss_pred             HhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCc
Confidence             1223333  334567899999999999999999999999999999999999999999999995 56899999998

>KOG0276|consensus

Probab=100.00  E-value=2.2e-35  Score=263.29  Aligned_cols=402  Identities=16%  Similarity=0.253  Sum_probs=294.0

Q ss_pred             CCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC
Q psy17188         70 GGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK  147 (504)
Q Consensus        70 ~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~  147 (504)
                      ...+|.++++.|.......++=++.+.+|+...+. .+..+ -.+-+|.+..|-...+++++|+ |..|+||+..+.+..
T Consensus        12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV   90 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKV   90 (794)
T ss_pred             cCCceeeeecCCCCceEEEeeecCeeEEEecccce-eeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceee
Confidence            46789999999988777777777788888766544 33444 4678999999999999999999 899999999986543


Q ss_pred             CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCc
Q psy17188        148 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGN  226 (504)
Q Consensus       148 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~  226 (504)
                      ..     +..|.+.|.+++.+|...+++++++|-+|++||.+. +......+.+|..-|.+++|+| |.+.+++++-|++
T Consensus        91 ~~-----FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~-~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT  164 (794)
T KOG0276|consen   91 KT-----FEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN-EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT  164 (794)
T ss_pred             EE-----eeccccceeeeeecCCCCeEEecCCccEEEEeeccC-ceeeeeEEcCcceEEEEEEecCCCccceeeeecccc
Confidence            33     338999999999999999999999999999999986 4667888999999999999999 6679999999999


Q ss_pred             EEEEECCCCeEEEeecCCCCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASCIDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      |+||.+.+..+..++++|...|+|+++-+  |..+|++|+.|.++++||..+..+               .....+|...
T Consensus       165 VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C---------------V~TLeGHt~N  229 (794)
T KOG0276|consen  165 VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC---------------VQTLEGHTNN  229 (794)
T ss_pred             EEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH---------------HHHhhccccc
Confidence            99999999999999999999999999988  446999999999999999998875               4555678999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE----------
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV----------  374 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i----------  374 (504)
                      |..+.|+|.-..+++|++||++++|...+-+  ....+.-....+.+++-.+..+  .++.|..+|.+.+          
T Consensus       230 vs~v~fhp~lpiiisgsEDGTvriWhs~Ty~--lE~tLn~gleRvW~I~~~k~~~--~i~vG~Deg~i~v~lgreeP~vs  305 (794)
T KOG0276|consen  230 VSFVFFHPELPIIISGSEDGTVRIWNSKTYK--LEKTLNYGLERVWCIAAHKGDG--KIAVGFDEGSVTVKLGREEPAVS  305 (794)
T ss_pred             ceEEEecCCCcEEEEecCCccEEEecCccee--hhhhhhcCCceEEEEeecCCCC--eEEEeccCCcEEEEccCCCCcee
Confidence            9999999999999999999999999987763  3344444555788888777666  4666655554432          


Q ss_pred             --------EecCCCC---------C--------CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC---
Q psy17188        375 --------WDISQPG---------S--------KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---  426 (504)
Q Consensus       375 --------~d~~~~~---------~--------~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~---  426 (504)
                              |.....-         .        ..++.....-..+-....++-+|+|++++++ .||.-.||-.-.   
T Consensus       306 Md~~gKIiwa~~~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~Vc-gdGEyiIyTala~Rn  384 (794)
T KOG0276|consen  306 MDSNGKIIWAVHSEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVC-GDGEYIIYTALALRN  384 (794)
T ss_pred             ecCCccEEEEcCceeeeeeceeccCcccccCCccccchhhhccccccchHHhccCCCCcEEEEe-cCccEEEEEeeehhh
Confidence                    2211100         0        0000000000011123357788999877776 466666654211   


Q ss_pred             ---------------CC---------cceeecccCCCCceeEEEECC---CCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        427 ---------------PT---------PRIKAELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       427 ---------------~~---------~~~~~~~~~~~~~v~~l~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                                     .+         ......+..+..  ....++.   -|..|+....++.+++||.+++++++++.-
T Consensus       385 K~fG~~~eFvw~~dsne~avRes~~~vki~knfke~ks--i~~~~~~e~i~gg~Llg~~ss~~~~fydW~~~~lVrrI~v  462 (794)
T KOG0276|consen  385 KAFGSGLEFVWAADSNEFAVRESNGNVKIFKNFKEHKS--IRPDMSAEGIFGGPLLGVRSSDFLCFYDWESGELVRRIEV  462 (794)
T ss_pred             cccccceeEEEcCCCCeEEEEecCCceEEEecceeccc--cccccceeeecCCceEEEEeCCeEEEEEcccceEEEEEee
Confidence                           00         000001111100  0001111   123344444566799999999999999874


Q ss_pred             cCCceEEEEEccCCCEEEEecCCC
Q psy17188        480 HTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       480 h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .   ...+.|+.+|..++.++.|.
T Consensus       463 ~---~k~v~w~d~g~lVai~~d~S  483 (794)
T KOG0276|consen  463 T---SKHVYWSDNGELVAIAGDDS  483 (794)
T ss_pred             c---cceeEEecCCCEEEEEecCc
Confidence            3   45678999999999888763

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.3e-35  Score=300.16  Aligned_cols=315  Identities=21%  Similarity=0.298  Sum_probs=245.2

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc------cceeeeecCcCce
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP------RIKAELTSSAPAC  206 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~v  206 (504)
                      +|.+++|+.........+..-....|.+.|.+++|+|++++||+|+.|+.|+||++.....      .....+. +...+
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v  535 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL  535 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence            5678888876533222222223346899999999999999999999999999999764210      0112222 34578


Q ss_pred             EEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        207 YALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       207 ~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      .+++|++ ++.+|++++.||+|++||+.+++.+..+.+|.+.|++++|+| ++.+|++++.|++|++||++++...    
T Consensus       536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~----  611 (793)
T PLN00181        536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI----  611 (793)
T ss_pred             eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE----
Confidence            9999987 477999999999999999999999999999999999999997 7889999999999999999987631    


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                                  ........+.++.|+ +++.+|++|+.|+.|++||++... .....+..|...|..+.|. ++.  .+
T Consensus       612 ------------~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~-~~~~~~~~h~~~V~~v~f~-~~~--~l  675 (793)
T PLN00181        612 ------------GTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK-LPLCTMIGHSKTVSYVRFV-DSS--TL  675 (793)
T ss_pred             ------------EEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC-ccceEecCCCCCEEEEEEe-CCC--EE
Confidence                        112234568899995 579999999999999999998753 2344566888899999997 444  78


Q ss_pred             eeccCCCeEEEEecCCCCCCCc-ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec--------
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTP-VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE--------  434 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~--------  434 (504)
                      ++++.|+.|++||++....... ........|...+..++|+|++.+|++|+.|+.|++|+.....+.....        
T Consensus       676 vs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~  755 (793)
T PLN00181        676 VSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVS  755 (793)
T ss_pred             EEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCccc
Confidence            9999999999999975321111 1112234577888999999999999999999999999987554332211        


Q ss_pred             ---ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        435 ---LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       435 ---~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                         ...+...|.+++|+|++.+|++|+.||.|+||++
T Consensus       756 ~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        756 GLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             ccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence               2334567999999999999999999999999996

>KOG0293|consensus

Probab=100.00  E-value=8.6e-37  Score=259.08  Aligned_cols=282  Identities=19%  Similarity=0.309  Sum_probs=231.4

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ...+..|...|+-+.||++|++||+++.|.+..+|++...   +..+++.+|..+|..+.|+||.++|++++.|..+.+|
T Consensus       217 ~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lw  296 (519)
T KOG0293|consen  217 WQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLW  296 (519)
T ss_pred             hhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeec
Confidence            4457789999999999999999999999999999987654   4578889999999999999999999999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-CCCceee
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SAPACYA  351 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~~i~~  351 (504)
                      |..+|...              ......+...+.+.+|.|||..+++|+.|+.+..||+......   ...+ ....+.+
T Consensus       297 Dv~tgd~~--------------~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~---~W~gvr~~~v~d  359 (519)
T KOG0293|consen  297 DVDTGDLR--------------HLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILG---NWEGVRDPKVHD  359 (519)
T ss_pred             cCCcchhh--------------hhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhh---cccccccceeEE
Confidence            99999743              1222234578999999999999999999999999999865311   1111 2247999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      +++++||+  .+++...|..|++|+.+.......      .....+|++++.|.|++++++.-.+..+++||++....+ 
T Consensus       360 lait~Dgk--~vl~v~~d~~i~l~~~e~~~dr~l------ise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv-  430 (519)
T KOG0293|consen  360 LAITYDGK--YVLLVTVDKKIRLYNREARVDRGL------ISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLV-  430 (519)
T ss_pred             EEEcCCCc--EEEEEecccceeeechhhhhhhcc------ccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHH-
Confidence            99999999  566666899999999876543322      234678999999999999999999999999999955443 


Q ss_pred             eecccCCCC--ceeEEEECC-CCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccC-CCEEEEecCCCC
Q psy17188        432 KAELTSSAP--ACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNT  504 (504)
Q Consensus       432 ~~~~~~~~~--~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d-~~~l~s~s~Dgt  504 (504)
                       ....+|..  -+-.-+|-- +..++++|++|+.|+||+..+|+++..+.||...|++++|+|. -..+|+||+|||
T Consensus       431 -~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgt  506 (519)
T KOG0293|consen  431 -RKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGT  506 (519)
T ss_pred             -HHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCe
Confidence             33344433  333445544 5689999999999999999999999999999999999999995 467899999997

>KOG0266|consensus

Probab=100.00  E-value=9.2e-36  Score=281.53  Aligned_cols=291  Identities=24%  Similarity=0.426  Sum_probs=245.4

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC-CCCe
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL-HNQT  236 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~-~~~~  236 (504)
                      +...|.++.|+++|+.+++++.++.+++|+....+......+.+|...|.+++|+|+++++++++.|++|+|||+ ..+.
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~  237 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR  237 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence            478899999999999999999999999999965552345566899999999999999999999999999999999 5669


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .++++++|...|++++|+|+++++++|+.|++|++||++++++               ......|...|.+++|++++++
T Consensus       238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~---------------~~~l~~hs~~is~~~f~~d~~~  302 (456)
T KOG0266|consen  238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGEC---------------VRKLKGHSDGISGLAFSPDGNL  302 (456)
T ss_pred             EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeE---------------EEeeeccCCceEEEEECCCCCE
Confidence            9999999999999999999999999999999999999999875               4556788899999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCC--ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      |++++.|+.|++||+.++.......+..+..  .+..+.|+|++.  +++++..|+.+++||+...............  
T Consensus       303 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~--~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~--  378 (456)
T KOG0266|consen  303 LVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGK--YLLSASLDRTLKLWDLRSGKSVGTYTGHSNL--  378 (456)
T ss_pred             EEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCc--EEEEecCCCeEEEEEccCCcceeeecccCCc--
Confidence            9999999999999999886322223333332  589999999999  8999999999999999876544433322211  


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCC-CCceeEEEECCCCCEEEEee--CCCcEEEEEcC
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAISPDSKVCFSCC--SDGNIAVWDLH  469 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~~~~~l~s~~--~dg~i~iwd~~  469 (504)
                      ...+.+...++.++++++|+.|+.|++||+.++..+.  .+.+| ...+..+.++|..+++++++  .|+.+++|..+
T Consensus       379 ~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~--~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  379 VRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQ--RLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             ceeEecccccCCCCeEEEEeCCceEEEEeCCccchhh--hhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            1345566678899999999999999999999865444  44555 78889999999999999998  68999999754

>KOG0266|consensus

Probab=100.00  E-value=1.6e-35  Score=279.82  Aligned_cols=290  Identities=24%  Similarity=0.433  Sum_probs=237.7

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      |...|+++.|+++|+++++++ |+.+++|+...... .....+  .+|...|.+++|+|+++++++++.|++|+|||+..
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~-~~~~~l--~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~  234 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS-NLLREL--SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD  234 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc-hhhccc--cccccceeeeEECCCCcEEEEecCCceEEEeeccC
Confidence            488999999999999999987 99999999966442 122222  48999999999999999999999999999999943


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                       .......+.+|...|++++|+|+++++++|+.|++|+|||+++++++..+.+|...|++++|++++++|++++.|+.|+
T Consensus       235 -~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~  313 (456)
T KOG0266|consen  235 -DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIR  313 (456)
T ss_pred             -CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEE
Confidence             3345778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC---
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---  347 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~---  347 (504)
                      +||+.++.....           ..+........++++.|+|++.++++++.|+.+++||+.......  ....|..   
T Consensus       314 vwd~~~~~~~~~-----------~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~--~~~~~~~~~~  380 (456)
T KOG0266|consen  314 VWDLETGSKLCL-----------KLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVG--TYTGHSNLVR  380 (456)
T ss_pred             EEECCCCceeee-----------ecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCccee--eecccCCcce
Confidence            999999983200           011111111168999999999999999999999999999774333  3333333   


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC-CCceEEEEEcCCCCEEEEee--CCCcEEEeeC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGG--EASNLSIWDL  424 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~~--~dg~i~iwd~  424 (504)
                      .+.....++.+.  ++.+++.|+.|.+||.........+     ..| ...+..+.++|...++++++  .|+.+++|..
T Consensus       381 ~~~~~~~~~~~~--~i~sg~~d~~v~~~~~~s~~~~~~l-----~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~  453 (456)
T KOG0266|consen  381 CIFSPTLSTGGK--LIYSGSEDGSVYVWDSSSGGILQRL-----EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY  453 (456)
T ss_pred             eEecccccCCCC--eEEEEeCCceEEEEeCCccchhhhh-----cCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence            344445566777  8999999999999999874332222     245 77889999999999999988  6888999975


Q ss_pred             C
Q psy17188        425 A  425 (504)
Q Consensus       425 ~  425 (504)
                      +
T Consensus       454 ~  454 (456)
T KOG0266|consen  454 D  454 (456)
T ss_pred             C
Confidence            4

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.1e-34  Score=262.96  Aligned_cols=282  Identities=27%  Similarity=0.483  Sum_probs=238.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      +|.+.|.+++|+|++++|++++ |+.|++|++.++.   ...  ....|...+..+.|+|++++|++++.++.|++|++.
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~---~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE---LLR--TLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC---cEE--EEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence            7999999999999999999988 9999999998753   222  223678889999999999999999999999999998


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      +.+  ....+..|...+.++.|+++++++++++.|+.|.+||+.+++....+..|...+.+++|+|++.++++++.|+.|
T Consensus        82 ~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i  159 (289)
T cd00200          82 TGE--CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI  159 (289)
T ss_pred             ccc--ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcE
Confidence            654  355667888889999999998888888889999999999999999999999999999999998888888889999


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ++||+++++.               ......+...+.++.|+|+++.+++++.++.+++||++..+  ....+..+...+
T Consensus       160 ~i~d~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~i  222 (289)
T cd00200         160 KLWDLRTGKC---------------VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK--CLGTLRGHENGV  222 (289)
T ss_pred             EEEEcccccc---------------ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCc--eecchhhcCCce
Confidence            9999987653               12223556689999999999999999999999999998753  344444667799


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .++.+++++.  ++++++.++.+++||+........+     ..+...+.+++|+|++++|++++.|+.|++|+
T Consensus       223 ~~~~~~~~~~--~~~~~~~~~~i~i~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         223 NSVAFSPDGY--LLASGSEDGTIRVWDLRTGECVQTL-----SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEEEEcCCCc--EEEEEcCCCcEEEEEcCCceeEEEc-----cccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            9999999955  7778878999999999864332222     25677899999999999999999999999996

>KOG0292|consensus

Probab=100.00  E-value=4.3e-35  Score=271.34  Aligned_cols=359  Identities=16%  Similarity=0.284  Sum_probs=282.2

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      -+..|..++|+|...++.++- .|.|++||.+-+.....     +..|+++|..++|+|++.++++|++|..|++|+.++
T Consensus         8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~r-----FdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~   82 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDR-----FDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT   82 (1202)
T ss_pred             ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhh-----hhccCCccceeeecCCCCeEEecCCccEEEEEeccc
Confidence            456789999999999999988 99999999976533332     238999999999999999999999999999999986


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      .+  ...++.+|-+.|..+.|++.-.+++++|.|.+|+||+..+++++..+.||...|.|.+|+|....++++|.|.+||
T Consensus        83 rr--clftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVR  160 (1202)
T KOG0292|consen   83 RR--CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVR  160 (1202)
T ss_pred             ce--ehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEE
Confidence            54  5788999999999999999999999999999999999999999999999999999999999888999999999999


Q ss_pred             EEECCCCceEEEeec--------------CCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        271 SWDLREGCVKVWDIS--------------QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      +||+..-+.+.....              .-+....+-.....+|+..|+-++|+|.-..+++|+.|..|++|.+...+.
T Consensus       161 VWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa  240 (1202)
T KOG0292|consen  161 VWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA  240 (1202)
T ss_pred             EEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc
Confidence            999874321110000              001111122334567899999999999999999999999999999987665


Q ss_pred             cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        337 RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      -..-...+|...|.++-|+|...  ++++.+.|+.|++||+........+.     ........++.+|..+++++|- |
T Consensus       241 WEvDtcrgH~nnVssvlfhp~q~--lIlSnsEDksirVwDm~kRt~v~tfr-----rendRFW~laahP~lNLfAAgH-D  312 (1202)
T KOG0292|consen  241 WEVDTCRGHYNNVSSVLFHPHQD--LILSNSEDKSIRVWDMTKRTSVQTFR-----RENDRFWILAAHPELNLFAAGH-D  312 (1202)
T ss_pred             eeehhhhcccCCcceEEecCccc--eeEecCCCccEEEEecccccceeeee-----ccCCeEEEEEecCCcceeeeec-C
Confidence            56667788999999999999887  89999999999999998654333322     3456788999999999888775 5


Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce--EEEEeec---CCceEEEEEcc
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGH---TDGASCIDISA  491 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~h---~~~v~~~~~s~  491 (504)
                      +-+.+|.++...+            +.  +.  +++.|+..- |..|+-+|+.+.+-  +..++..   ..++.++.++|
T Consensus       313 sGm~VFkleRErp------------a~--~v--~~n~LfYvk-d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNp  375 (1202)
T KOG0292|consen  313 SGMIVFKLERERP------------AY--AV--NGNGLFYVK-DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNP  375 (1202)
T ss_pred             CceEEEEEcccCc------------eE--EE--cCCEEEEEc-cceEEeeeccccccceeEeccCCCcccCCcceeeecc
Confidence            5566776653221            11  33  345555553 88999999988544  3344432   35788999999


Q ss_pred             CCCE-EEEecCC
Q psy17188        492 DGTK-LWTGGLD  502 (504)
Q Consensus       492 d~~~-l~s~s~D  502 (504)
                      ..+. |++...|
T Consensus       376 ae~~vlics~~~  387 (1202)
T KOG0292|consen  376 AENAVLICSNLD  387 (1202)
T ss_pred             ccCeEEEEeccC
Confidence            7554 4443333

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=3e-34  Score=260.01  Aligned_cols=283  Identities=28%  Similarity=0.479  Sum_probs=240.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +|.+.|.+++|+|++++|++++.||.|++|++.+.+  ....+..|...+..+.|+++++++++++.|+.|++||+.+++
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~   84 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE--LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE   84 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC--cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc
Confidence            788999999999999999999999999999998665  355677888889999999999999999999999999999988


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .+..+..|...+.++.|+++++++++++.|+.+++||+++++.               ......+...+.++.|+|++++
T Consensus        85 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~  149 (289)
T cd00200          85 CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC---------------LTTLRGHTDWVNSVAFSPDGTF  149 (289)
T ss_pred             ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEE---------------EEEeccCCCcEEEEEEcCcCCE
Confidence            8888999999999999999988888888899999999987653               2222356678999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.++.+++||++..+  ....+..+...+.++.|+|+++  .+++++.++.+++||++........     ..+..
T Consensus       150 l~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~i~i~d~~~~~~~~~~-----~~~~~  220 (289)
T cd00200         150 VASSSQDGTIKLWDLRTGK--CVATLTGHTGEVNSVAFSPDGE--KLLSSSSDGTIKLWDLSTGKCLGTL-----RGHEN  220 (289)
T ss_pred             EEEEcCCCcEEEEEccccc--cceeEecCccccceEEECCCcC--EEEEecCCCcEEEEECCCCceecch-----hhcCC
Confidence            9988889999999998664  3444556777899999999997  5667777999999999864332222     14566


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      .+.+++|+|++.++++++.++.|++||+.+++....  +..+...+.+++|+|++++|++++.||.+++|+
T Consensus       221 ~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         221 GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQT--LSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEE--ccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            899999999998888888899999999987654433  447777899999999999999999999999996

>KOG1539|consensus

Probab=100.00  E-value=2.5e-34  Score=264.87  Aligned_cols=399  Identities=18%  Similarity=0.261  Sum_probs=312.1

Q ss_pred             ccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCC-CCce
Q psy17188         86 QPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQR-DNYI  162 (504)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~v  162 (504)
                      +.+++..+.+.+|++.. .+.+.++ ++...|+++.=+|--..+|.|. +|+|.|++++.++....      +.| .+.|
T Consensus       175 IvvGs~~G~lql~Nvrt-~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~s------Fk~d~g~V  247 (910)
T KOG1539|consen  175 IVVGSSQGRLQLWNVRT-GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMS------FKQDWGRV  247 (910)
T ss_pred             EEEeecCCcEEEEEecc-CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEE------EEccccce
Confidence            34445555666666544 4455555 8899999999999999999998 99999999988633222      245 4999


Q ss_pred             EEEEEccCCCEE-EEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC----eE
Q psy17188        163 RSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----TL  237 (504)
Q Consensus       163 ~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~----~~  237 (504)
                      ++++|.-||+.+ ++|+..|.+.+||++..+. .......|.+.|....|.|....+++++.|..+++|=.+++    +.
T Consensus       248 tslSFrtDG~p~las~~~~G~m~~wDLe~kkl-~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~  326 (910)
T KOG1539|consen  248 TSLSFRTDGNPLLASGRSNGDMAFWDLEKKKL-INVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRL  326 (910)
T ss_pred             eEEEeccCCCeeEEeccCCceEEEEEcCCCee-eeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchh
Confidence            999999999865 5566679999999986543 23444578888999999999999999999999988865543    56


Q ss_pred             EEeecCCCCCeEEEEEc-cCCCEEEEEcCCCeEEEEECCCC---------------------------------------
Q psy17188        238 VRQFQGHTDGASCIDIS-ADGTKLWTGGLDNTVRSWDLREG---------------------------------------  277 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~i~~wd~~~~---------------------------------------  277 (504)
                      ++.-.||..+..|+.|. .++..+.+++.|++++.+++...                                       
T Consensus       327 LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~  406 (910)
T KOG1539|consen  327 LRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENA  406 (910)
T ss_pred             eeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccc
Confidence            67778999999999998 57889999999999888876411                                       


Q ss_pred             ----------------ceEEEeecCCCCCC-CcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        278 ----------------CVKVWDISQPGSKT-PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       278 ----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                                      +...|+........ .+...........+++++.++.|++.+.|+..|.|.+|+++++-.....
T Consensus       407 RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf  486 (910)
T KOG1539|consen  407 REKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSF  486 (910)
T ss_pred             hhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccc
Confidence                            12233333322211 0011111124467899999999999999999999999999988332222


Q ss_pred             -eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        341 -ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       341 -~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                       ..+.|..+|+.++...-++  .+++++.+|.+.+||+........+      .-...+..+..+.....++++..|-.|
T Consensus       487 ~~~~ah~~~V~gla~D~~n~--~~vsa~~~Gilkfw~f~~k~l~~~l------~l~~~~~~iv~hr~s~l~a~~~ddf~I  558 (910)
T KOG1539|consen  487 GDSPAHKGEVTGLAVDGTNR--LLVSAGADGILKFWDFKKKVLKKSL------RLGSSITGIVYHRVSDLLAIALDDFSI  558 (910)
T ss_pred             ccCccccCceeEEEecCCCc--eEEEccCcceEEEEecCCcceeeee------ccCCCcceeeeeehhhhhhhhcCceeE
Confidence             2367888999999988777  8999999999999999875422222      335567788888888899999999999


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      .++|..+.  .....+.+|...|++++|||||++|++++.|++|++||+.++.++..+. -..+.+++.|+|+|.+|||+
T Consensus       559 ~vvD~~t~--kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~  635 (910)
T KOG1539|consen  559 RVVDVVTR--KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATV  635 (910)
T ss_pred             EEEEchhh--hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEE
Confidence            99999865  4556778899999999999999999999999999999999999998776 57789999999999999999


Q ss_pred             cCCC
Q psy17188        500 GLDN  503 (504)
Q Consensus       500 s~Dg  503 (504)
                      ..|+
T Consensus       636 Hvd~  639 (910)
T KOG1539|consen  636 HVDQ  639 (910)
T ss_pred             EecC
Confidence            8874

>KOG0276|consensus

Probab=100.00  E-value=4.7e-34  Score=254.85  Aligned_cols=279  Identities=14%  Similarity=0.294  Sum_probs=242.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .|++.|.++.|+|...++.++- +|.|.||+.++....+.+.     -.+-+|.+..|-+..+++++|++|..|++|+..
T Consensus        11 ~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe-----V~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen   11 SRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE-----VSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             ccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeee-----ecccchhhheeeeccceEEEecCCceEEEEecc
Confidence            5899999999999999998888 9999999998853333332     346789999999999999999999999999999


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCC
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISA-DGTKLWTGGLDN  267 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg  267 (504)
                      +.+  ....+..|.+-|.+++.+|...++++++.|-+|++||.+.+ .+.+++.+|+.-|.+++|+| |.+.+++++.|+
T Consensus        86 t~e--kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr  163 (794)
T KOG0276|consen   86 TGE--KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR  163 (794)
T ss_pred             cce--eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence            766  47788999999999999999999999999999999999865 78899999999999999999 778999999999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC--CEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      +|++|.+.+...               .+...+|...|+++.+-+.|  .+|++|+.|.+++|||.++.  .....+.+|
T Consensus       164 TVKVWslgs~~~---------------nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk--~CV~TLeGH  226 (794)
T KOG0276|consen  164 TVKVWSLGSPHP---------------NFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK--SCVQTLEGH  226 (794)
T ss_pred             cEEEEEcCCCCC---------------ceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH--HHHHHhhcc
Confidence            999999987653               56667899999999998844  69999999999999999987  566778899


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      ...|..+.|+|.-.  ++++|+.||+++||+..+-.....+.     -....+.+++-.+.++.+++|.++|.|.
T Consensus       227 t~Nvs~v~fhp~lp--iiisgsEDGTvriWhs~Ty~lE~tLn-----~gleRvW~I~~~k~~~~i~vG~Deg~i~  294 (794)
T KOG0276|consen  227 TNNVSFVFFHPELP--IIISGSEDGTVRIWNSKTYKLEKTLN-----YGLERVWCIAAHKGDGKIAVGFDEGSVT  294 (794)
T ss_pred             cccceEEEecCCCc--EEEEecCCccEEEecCcceehhhhhh-----cCCceEEEEeecCCCCeEEEeccCCcEE
Confidence            99999999999988  89999999999999987654443332     2356788999989888899988877654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=5.8e-34  Score=289.95  Aligned_cols=293  Identities=17%  Similarity=0.317  Sum_probs=235.6

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC---CceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK---TPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSI  185 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i  185 (504)
                      .|.+.|++++|+|+++++++++ |+.|+||++......   ....... ..+...|.+++|++ ++.+|++++.||+|++
T Consensus       481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~las~~~Dg~v~l  559 (793)
T PLN00181        481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWNSYIKSQVASSNFEGVVQV  559 (793)
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEE-ecccCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence            5999999999999999999998 999999997642110   0011111 13456799999987 5789999999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc-cCCCEEEEE
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-ADGTKLWTG  263 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~  263 (504)
                      ||+.+++  ....+.+|...|++++|+| ++.+|++++.|+.|++||++++..+..+..+ ..+.++.|+ +++.+|++|
T Consensus       560 Wd~~~~~--~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latg  636 (793)
T PLN00181        560 WDVARSQ--LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFG  636 (793)
T ss_pred             EECCCCe--EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEE
Confidence            9998654  3566788999999999997 7889999999999999999999988888744 679999995 478999999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC----ccce
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT----PRIK  339 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~  339 (504)
                      +.||.|++||+++....              ......|...|.++.|. ++.+|++++.|++|++||+....    ....
T Consensus       637 s~dg~I~iwD~~~~~~~--------------~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l  701 (793)
T PLN00181        637 SADHKVYYYDLRNPKLP--------------LCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPL  701 (793)
T ss_pred             eCCCeEEEEECCCCCcc--------------ceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcce
Confidence            99999999999876421              22334677889999997 67899999999999999997532    2345


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC--------cccccccccCCCceEEEEEcCCCCEEE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT--------PVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--------~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ..+.+|...+..+++++++.  ++++++.|+.+++|+........        .........+...|.+++|+|++..|+
T Consensus       702 ~~~~gh~~~i~~v~~s~~~~--~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lv  779 (793)
T PLN00181        702 HSFMGHTNVKNFVGLSVSDG--YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLV  779 (793)
T ss_pred             EEEcCCCCCeeEEEEcCCCC--EEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEE
Confidence            56778888899999999987  89999999999999976542111        011111233556799999999999999


Q ss_pred             EeeCCCcEEEeeC
Q psy17188        412 VGGEASNLSIWDL  424 (504)
Q Consensus       412 ~~~~dg~i~iwd~  424 (504)
                      +|+.+|.|++|++
T Consensus       780 a~~~dG~I~i~~~  792 (793)
T PLN00181        780 AANSTGNIKILEM  792 (793)
T ss_pred             EecCCCcEEEEec
Confidence            9999999999986

>KOG0277|consensus

Probab=100.00  E-value=3.5e-35  Score=233.81  Aligned_cols=297  Identities=20%  Similarity=0.380  Sum_probs=243.9

Q ss_pred             CCCCCCCCCCCccccCCCcCcccCCCCCccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCc
Q psy17188         36 PPSLNAYPRPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEV  115 (504)
Q Consensus        36 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  115 (504)
                      .|+++.|    .|.|||.-..++..+.....|+.|+++++.+....                   +...+....+.-.+.
T Consensus         6 tpgf~Gy----svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~-------------------~~gi~e~~s~d~~D~   62 (311)
T KOG0277|consen    6 TPGFHGY----SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTD-------------------PKGIQECQSYDTEDG   62 (311)
T ss_pred             cCCcccc----eeEecccccchhheeehhhcccccCceEEEEecCC-------------------CCCeEEEEeeecccc
Confidence            6777777    68999999999999999999999999999998751                   223344555666788


Q ss_pred             EEEEEEcCC--CcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCC
Q psy17188        116 VCAVTISNP--TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       116 V~~v~~s~~--~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      +..++|++.  ..++++.+||.++|||+..  ...++..+.  .|+..|.++.|++ +.+.+++++.|++|++|+...++
T Consensus        63 LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~--~s~Pi~~~k--EH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~  138 (311)
T KOG0277|consen   63 LFDVAWSENHENQVIAASGDGSLRLFDLTM--PSKPIHKFK--EHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN  138 (311)
T ss_pred             eeEeeecCCCcceEEEEecCceEEEeccCC--CCcchhHHH--hhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence            999999974  4555666699999999543  344555444  7999999999999 66778888999999999988544


Q ss_pred             ccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEE
Q psy17188        193 PRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVR  270 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~  270 (504)
                        ...++.+|...|....|+| ..+++++++.|+++++||++.......+..|...|.++.|+. +.+.|+||+.|+.|+
T Consensus       139 --Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr  216 (311)
T KOG0277|consen  139 --SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVR  216 (311)
T ss_pred             --ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEE
Confidence              4777999999999999999 567999999999999999987554455888999999999998 677999999999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      .||++.-+..              ......|.-.|+.++|||. ...|++++.|-++++||...+. ........|..-+
T Consensus       217 ~wDir~~r~p--------------l~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d-s~~e~~~~HtEFv  281 (311)
T KOG0277|consen  217 GWDIRNLRTP--------------LFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD-SAIETVDHHTEFV  281 (311)
T ss_pred             EEehhhcccc--------------ceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch-hhhhhhhccceEE
Confidence            9999986642              3444688889999999995 4678899999999999998654 3445566788889


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..+.|++-... .+++.+.|..+.||+-
T Consensus       282 ~g~Dws~~~~~-~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  282 CGLDWSLFDPG-QVASTGWDELLYVWNP  308 (311)
T ss_pred             eccccccccCc-eeeecccccceeeecc
Confidence            99999988444 8999999999999983

>KOG1408|consensus

Probab=100.00  E-value=2.8e-33  Score=253.68  Aligned_cols=448  Identities=20%  Similarity=0.237  Sum_probs=306.3

Q ss_pred             CCCCCC-CCCccccCCCcCcccCCCCCccCCCCCCCcceEEEECCCCCcccCCC--CCCcccCCCCCccccceeeecCCC
Q psy17188         38 SLNAYP-RPPLVGYDPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPF--PPDALIGPGIPRHARQINTLSHGE  114 (504)
Q Consensus        38 ~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~  114 (504)
                      ++-+|- ..-+|.|+|+..--+-    .+.  ...+.+.+++||++|+..+.+-  ....+..|++...........|+-
T Consensus        50 gl~aYpAGCvVVlfn~~~~tQ~h----lvn--ssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY  123 (1080)
T KOG1408|consen   50 GLCAYPAGCVVVLFNVDSCTQSH----LVN--SSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKY  123 (1080)
T ss_pred             cceeeccCcEEEEEcccccchhh----eec--ccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccc
Confidence            444554 4567899987643211    111  2366899999999998887776  334566777766664444458999


Q ss_pred             cEEEEEEcCCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy17188        115 VVCAVTISNPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      .|+|++|+|.++|+++-+   |=.|.+||++..-..      ....-...|..++|+.||.|+++.+ +..|++|.++..
T Consensus       124 ~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~------asnkiss~Vsav~fsEdgSYfvT~g-nrHvk~wyl~~~  196 (1080)
T KOG1408|consen  124 NVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSG------ASNKISSVVSAVAFSEDGSYFVTSG-NRHVKLWYLQIQ  196 (1080)
T ss_pred             cceeeeecCCCcEEEeeccccceEEEhhhhhhcccc------cccccceeEEEEEEccCCceeeeee-eeeEEEEEeecc
Confidence            999999999999999655   778899987643111      1112234556666666666665554 345555554321


Q ss_pred             C-------------------------------------------------------------------------------
Q psy17188        192 T-------------------------------------------------------------------------------  192 (504)
Q Consensus       192 ~-------------------------------------------------------------------------------  192 (504)
                      +                                                                               
T Consensus       197 ~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cg  276 (1080)
T KOG1408|consen  197 SKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACG  276 (1080)
T ss_pred             ccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEe
Confidence            1                                                                               


Q ss_pred             ---------------ccc------------------eee----eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        193 ---------------PRI------------------KAE----LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       193 ---------------~~~------------------~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                                     ...                  ...    -...-....++.|.+....|.+...|..++|||+++-
T Consensus       277 Ca~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~  356 (1080)
T KOG1408|consen  277 CAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDV  356 (1080)
T ss_pred             eccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEecccc
Confidence                           000                  000    0000112345778888888999999999999999875


Q ss_pred             eEE---EeecCCCCCeEEEEEccC-----------CCEEEEEcCCCeEEEEECCCCc---eEEEeecC--------CCCC
Q psy17188        236 TLV---RQFQGHTDGASCIDISAD-----------GTKLWTGGLDNTVRSWDLREGC---VKVWDISQ--------PGSK  290 (504)
Q Consensus       236 ~~~---~~~~~h~~~v~~~~~~~~-----------~~~l~s~~~dg~i~~wd~~~~~---~~~~~~~~--------~~~~  290 (504)
                      +.+   ..+--|...|+++.-.|-           ...+++++.|++|++||+..+.   +..-++-.        ....
T Consensus       357 ~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~  436 (1080)
T KOG1408|consen  357 NKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDST  436 (1080)
T ss_pred             ccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCc
Confidence            433   223348877777765441           1258999999999999998632   10000000        0000


Q ss_pred             -----------CCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC-CC
Q psy17188        291 -----------TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DS  358 (504)
Q Consensus       291 -----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~  358 (504)
                                 ..............+++++.+|+|++|++|...|++++|++...  .....+..|...|.++.++. +-
T Consensus       437 ~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l--~~~~~~eAHesEilcLeyS~p~~  514 (1080)
T KOG1408|consen  437 QQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQEL--EYTCFMEAHESEILCLEYSFPVL  514 (1080)
T ss_pred             hhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhh--hhhhheecccceeEEEeecCchh
Confidence                       00001122234566999999999999999999999999999876  56667888999999999974 33


Q ss_pred             CCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC--CEEEEeeCCCcEEEeeCCC---CCcceee
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG--RTLIVGGEASNLSIWDLAS---PTPRIKA  433 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g--~~l~~~~~dg~i~iwd~~~---~~~~~~~  433 (504)
                      ...++++++.|.-|.+||+...-    ........|...|+++.|..+|  ..+++++.|..|.+--.+.   +......
T Consensus       515 ~~kLLASasrdRlIHV~Dv~rny----~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~  590 (1080)
T KOG1408|consen  515 TNKLLASASRDRLIHVYDVKRNY----DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRH  590 (1080)
T ss_pred             hhHhhhhccCCceEEEEeccccc----chhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceecccc
Confidence            44489999999999999987532    1222334688999999999887  6788888998775543321   1111111


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee---cCCceEEEEEccCCCEEEEecCCCC
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---HTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ........+..++..|..+++++++.|.+|+||++++++..+.+++   |.+..-.+...|.|.||++...|+|
T Consensus       591 t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdkt  664 (1080)
T KOG1408|consen  591 TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKT  664 (1080)
T ss_pred             ccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCc
Confidence            1222345688999999999999999999999999999999999985   5567778999999999999999976

>KOG1407|consensus

Probab=100.00  E-value=1e-33  Score=226.40  Aligned_cols=278  Identities=16%  Similarity=0.200  Sum_probs=235.6

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~  233 (504)
                      ..+|...+.+++|+.+|..|++|+.|+++.+|+++...........+|.+.|-.++|.| ....+++++.|.+|++||++
T Consensus        16 ~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r   95 (313)
T KOG1407|consen   16 LQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIR   95 (313)
T ss_pred             hhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEec
Confidence            34788999999999999999999999999999999876666677789999999999988 45699999999999999999


Q ss_pred             CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      .+++...+....+. .-+.|+|+|++++.++.|..|.+.|.++.+.                ....+....+..++|+.+
T Consensus        96 ~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~----------------~~~~~~~~e~ne~~w~~~  158 (313)
T KOG1407|consen   96 SGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKI----------------VNEEQFKFEVNEISWNNS  158 (313)
T ss_pred             cCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccce----------------eehhcccceeeeeeecCC
Confidence            99999988854444 4578999999999999999999999998763                333444566788899987


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccccc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ  393 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~  393 (504)
                      +.+++.....|.|.|......  ++...++                                                 .
T Consensus       159 nd~Fflt~GlG~v~ILsypsL--kpv~si~-------------------------------------------------A  187 (313)
T KOG1407|consen  159 NDLFFLTNGLGCVEILSYPSL--KPVQSIK-------------------------------------------------A  187 (313)
T ss_pred             CCEEEEecCCceEEEEecccc--ccccccc-------------------------------------------------c
Confidence            887777777788888776543  2222222                                                 2


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      |.....|+.|+|+|+++|+|+.|-.+.+||++  +.++...+..+.-+|..+.|+.||++||+|++|..|-|-++++|..
T Consensus       188 H~snCicI~f~p~GryfA~GsADAlvSLWD~~--ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~  265 (313)
T KOG1407|consen  188 HPSNCICIEFDPDGRYFATGSADALVSLWDVD--ELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDR  265 (313)
T ss_pred             CCcceEEEEECCCCceEeeccccceeeccChh--HhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCe
Confidence            33445589999999999999999999999998  5577777788889999999999999999999999999999999999


Q ss_pred             EEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        474 VRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       474 ~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +..++ +.++...++|+|...+||-+++|.
T Consensus       266 ~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk  294 (313)
T KOG1407|consen  266 VWEIP-CEGPTFTVAWHPKRPLLAYACDDK  294 (313)
T ss_pred             EEEee-ccCCceeEEecCCCceeeEEecCC
Confidence            99997 788999999999999999998874

>KOG0275|consensus

Probab=100.00  E-value=2.5e-35  Score=242.91  Aligned_cols=289  Identities=19%  Similarity=0.350  Sum_probs=248.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccce------eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK------AELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      +.+..+.|..|+|||++|++|+.||.|.+||..+++.+..      -.+--+...|.|+.|+.|...|++|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            5677899999999999999999999999999988764422      2344577889999999999999999999999999


Q ss_pred             ECCCCeEEEeec-CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        231 DLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       231 d~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      .+++|.+++.|. .|...|+|+.|+.|+..+++++.|.++++.-+.+|++               .....+|...|+...
T Consensus       291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~---------------LKEfrGHsSyvn~a~  355 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKC---------------LKEFRGHSSYVNEAT  355 (508)
T ss_pred             EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchh---------------HHHhcCccccccceE
Confidence            999999999997 7999999999999999999999999999999999985               555678999999999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      |.++|..+++++.||++++|+.++.+........+...++..+-..|.+.. .++.+...+++.+.++...-    +..+
T Consensus       356 ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpe-h~iVCNrsntv~imn~qGQv----Vrsf  430 (508)
T KOG0275|consen  356 FTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPE-HFIVCNRSNTVYIMNMQGQV----VRSF  430 (508)
T ss_pred             EcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCc-eEEEEcCCCeEEEEeccceE----Eeee
Confidence            999999999999999999999999888777777778888999999888765 67778888999998876421    1111


Q ss_pred             -ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        390 -DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       390 -~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                       ......+...+.+.+|.|.++++.++|+.++.|...+++...  .+.-|...+..++-+|..+.||+-++||.+++|.
T Consensus       431 sSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~--tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  431 SSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLER--TLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceee--eeecccccccccccCcccchhhhhcccchhhhcC
Confidence             111234556688999999999999999999999999886544  4455667788899999999999999999999995

>KOG0295|consensus

Probab=100.00  E-value=2.4e-34  Score=240.58  Aligned_cols=286  Identities=18%  Similarity=0.340  Sum_probs=247.0

Q ss_pred             ccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeC
Q psy17188         64 SLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDI  141 (504)
Q Consensus        64 ~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~  141 (504)
                      .+.++  ...|..+-+.|+-.+.+.+..+..+..|+.....- ...+ ||.+.|..++|+..|++|++++ |=.+++||.
T Consensus       103 ~l~g~--r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~-e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~  179 (406)
T KOG0295|consen  103 KLAGH--RSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL-ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDF  179 (406)
T ss_pred             hhhcc--ccceeeeeeccCceEEEEecCCceEEEEEccchhh-hhhhhccccceeEEEEecCccEEEecCCccchhheeH
Confidence            34444  45677788888887777777888888777655444 4455 9999999999999999999999 777999998


Q ss_pred             CCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE
Q psy17188        142 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  221 (504)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  221 (504)
                      ++.  ...+.  ...+|+..|.+++|-|.|.+|++++.|.+|+.|++.++..  ...+.+|...|..++.+.||.+++++
T Consensus       180 ~~~--~~c~k--s~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~c--v~t~~~h~ewvr~v~v~~DGti~As~  253 (406)
T KOG0295|consen  180 DTF--FRCIK--SLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYC--VKTFPGHSEWVRMVRVNQDGTIIASC  253 (406)
T ss_pred             HHH--HHHHH--HhcCcccceeeEEEEecCCeeeecccccceeEEeccccee--EEeccCchHhEEEEEecCCeeEEEec
Confidence            762  12222  3348999999999999999999999999999999998764  77889999999999999999999999


Q ss_pred             eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC----------C-----CEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD----------G-----TKLWTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~----------~-----~~l~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      +.|.+|++|-+.++++...++.|+-+|.+++|.|.          +     .++.+++.|++|++||+.++.+       
T Consensus       254 s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c-------  326 (406)
T KOG0295|consen  254 SNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC-------  326 (406)
T ss_pred             CCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE-------
Confidence            99999999999999999999999999999999663          2     4899999999999999999987       


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                              .+...+|.+.|..++|+|.|++|+++.+|+++++||+++.+  ....+..|..-++++.|..+..  ++++|
T Consensus       327 --------L~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~--cmk~~~ah~hfvt~lDfh~~~p--~VvTG  394 (406)
T KOG0295|consen  327 --------LFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ--CMKTLEAHEHFVTSLDFHKTAP--YVVTG  394 (406)
T ss_pred             --------EEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce--eeeccCCCcceeEEEecCCCCc--eEEec
Confidence                    67788999999999999999999999999999999999884  4445557777999999998887  89999


Q ss_pred             cCCCeEEEEec
Q psy17188        367 HYKSCVKVWDI  377 (504)
Q Consensus       367 ~~~~~i~i~d~  377 (504)
                      +-|..+++|..
T Consensus       395 sVdqt~KvwEc  405 (406)
T KOG0295|consen  395 SVDQTVKVWEC  405 (406)
T ss_pred             cccceeeeeec
Confidence            99999999974

>KOG0278|consensus

Probab=100.00  E-value=6e-35  Score=231.90  Aligned_cols=292  Identities=20%  Similarity=0.300  Sum_probs=252.9

Q ss_pred             eeeecCCCCceEEEEEcc---CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        152 QLDCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+.+.+|..+|..++|||   +|-+|++++.|+.-.+-+-+++..  +-.+.+|.+.|+....+.+....++++.|=+-+
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdw--igtfeghkgavw~~~l~~na~~aasaaadftak   84 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDW--IGTFEGHKGAVWSATLNKNATRAASAAADFTAK   84 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCc--EEeeeccCcceeeeecCchhhhhhhhcccchhh
Confidence            456779999999999997   899999999999988888887664  788999999999999998888889999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      +||.-+|..+..|. |..-|..++|+.|.++|++|+.+..+|+||++..+..              .....+|.+.|+.+
T Consensus        85 vw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~Ap--------------p~E~~ghtg~Ir~v  149 (334)
T KOG0278|consen   85 VWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAP--------------PKEISGHTGGIRTV  149 (334)
T ss_pred             hhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCC--------------chhhcCCCCcceeE
Confidence            99999999999998 9999999999999999999999999999999876531              44556889999999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      .|+...+.++++..|++|++||.+++.......++.   ++.++.+++++.   +++....+.|.+||...-+..     
T Consensus       150 ~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s---~VtSlEvs~dG~---ilTia~gssV~Fwdaksf~~l-----  218 (334)
T KOG0278|consen  150 LWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNS---PVTSLEVSQDGR---ILTIAYGSSVKFWDAKSFGLL-----  218 (334)
T ss_pred             EEeccCceEEeeccCCceEEEEeccCcEEEEEecCC---CCcceeeccCCC---EEEEecCceeEEeccccccce-----
Confidence            999999999999999999999999986555554443   899999999997   556667789999998764333     


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                       +.......|.+..++|+...+++|++|..++.||..+++.+... ..+|.++|.++.|+|||...++|++||+|++|.+
T Consensus       219 -Ks~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt  296 (334)
T KOG0278|consen  219 -KSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT  296 (334)
T ss_pred             -eeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeec-ccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence             33344667889999999999999999999999999998766553 5789999999999999999999999999999998


Q ss_pred             CCcce
Q psy17188        469 HNQTL  473 (504)
Q Consensus       469 ~~~~~  473 (504)
                      ..++.
T Consensus       297 ~~~~~  301 (334)
T KOG0278|consen  297 TPGKT  301 (334)
T ss_pred             cCCCc
Confidence            66554

>KOG0292|consensus

Probab=100.00  E-value=5.5e-34  Score=264.03  Aligned_cols=286  Identities=18%  Similarity=0.321  Sum_probs=254.4

Q ss_pred             eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCc
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      +......|..++|+|...+++++-..|.|++||.+-+.++..|..|.++|..++|+|++.++++|+.|-.|++|+..+.+
T Consensus         5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr   84 (1202)
T KOG0292|consen    5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR   84 (1202)
T ss_pred             hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence            34455678999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      +               .+...+|.+.|+.+.|++.-.++++++.|.+|+||+..+.  .....+.+|..-|.|..|+|..
T Consensus        85 c---------------lftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr--~~iavltGHnHYVMcAqFhptE  147 (1202)
T KOG0292|consen   85 C---------------LFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR--KCIAVLTGHNHYVMCAQFHPTE  147 (1202)
T ss_pred             e---------------hhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC--ceEEEEecCceEEEeeccCCcc
Confidence            6               6778899999999999999999999999999999999987  5667788899899999999987


Q ss_pred             CCceeeeccCCCeEEEEecCCCCCCC------------------------cccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGSKT------------------------PVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~~~------------------------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      .  ++++++-|.+||+||+..-....                        .+......+|+..|+-++|+|.-.++++|+
T Consensus       148 D--lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~  225 (1202)
T KOG0292|consen  148 D--LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGA  225 (1202)
T ss_pred             c--eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecC
Confidence            7  89999999999999986422111                        111222345888899999999999999999


Q ss_pred             CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      +|..|++|.....+.-.+....+|...|.++-|+|..+++++.++|++|+|||+...+.+++++...+.-+.++-+|..+
T Consensus       226 DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lN  305 (1202)
T KOG0292|consen  226 DDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELN  305 (1202)
T ss_pred             CcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcc
Confidence            99999999998766555667889999999999999999999999999999999999999999988888999999999999


Q ss_pred             EEEEecCCC
Q psy17188        495 KLWTGGLDN  503 (504)
Q Consensus       495 ~l~s~s~Dg  503 (504)
                      .++.|-+.|
T Consensus       306 LfAAgHDsG  314 (1202)
T KOG0292|consen  306 LFAAGHDSG  314 (1202)
T ss_pred             eeeeecCCc
Confidence            888776555

>KOG0313|consensus

Probab=100.00  E-value=1.3e-33  Score=237.51  Aligned_cols=291  Identities=19%  Similarity=0.379  Sum_probs=241.9

Q ss_pred             ccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC---EEEEecC
Q psy17188        104 ARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGE  179 (504)
Q Consensus       104 ~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~  179 (504)
                      ++..+.+.|.+.|.++...  +++|.+|+ ||.+++||....      ......+|.++|.+++|--...   .+++++.
T Consensus        96 P~pl~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~  167 (423)
T KOG0313|consen   96 PKPLQCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASM  167 (423)
T ss_pred             CCccccccchhhhhhhccc--CceEEEeecCCeeEEEecCCc------eEEEEecCCcceeeeEEEecCCccceEEEecC
Confidence            4556677899999999988  78999998 999999998653      3333449999999888865333   5999999


Q ss_pred             CCcEEEEeCCCCCcccee--eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-----------------------
Q psy17188        180 ASNLSIWDLASPTPRIKA--ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----------------------  234 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-----------------------  234 (504)
                      |.++++|.++.++.....  ...+|...|-++...+++..+++|+.|.+|.||+..+                       
T Consensus       168 Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~  247 (423)
T KOG0313|consen  168 DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEG  247 (423)
T ss_pred             CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcc
Confidence            999999998876644333  3349999999999999999999999999999999321                       


Q ss_pred             --CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        235 --QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       235 --~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                        +.++.++.+|..+|.++.|++ ...+++++.|.+|+.||+.++..                .........+.++.++|
T Consensus       248 ~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~----------------~~~~~~~ksl~~i~~~~  310 (423)
T KOG0313|consen  248 GTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGL----------------KSTLTTNKSLNCISYSP  310 (423)
T ss_pred             cccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccc----------------eeeeecCcceeEeeccc
Confidence              134567889999999999998 66899999999999999999873                33344566789999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188        313 DGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  391 (504)
                      ..++|++|+.|..+++||.+++.. .....+.+|...|..+.|+|.... .|++++.|+++++||++....    .....
T Consensus       311 ~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~-~~~S~S~D~t~klWDvRS~k~----plydI  385 (423)
T KOG0313|consen  311 LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEF-QLVSGSYDNTVKLWDVRSTKA----PLYDI  385 (423)
T ss_pred             ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCce-EEEEEecCCeEEEEEeccCCC----cceee
Confidence            999999999999999999998754 455678899999999999999887 899999999999999987532    23344


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ..|...|.++.|. ++.++++|+.|.+|+|+.-.
T Consensus       386 ~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  386 AGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             ccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            5789999999998 45689999999999998643

>KOG0313|consensus

Probab=100.00  E-value=6.5e-34  Score=239.24  Aligned_cols=306  Identities=18%  Similarity=0.347  Sum_probs=243.6

Q ss_pred             eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCC---CEEEEEeCCCc
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS---KVCFSCCSDGN  226 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~  226 (504)
                      ...+.+..|++.|.++...  +++|++|++||.+++||....   ......+|.++|.+++|....   ..|++++.|.+
T Consensus        96 P~pl~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk---~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqt  170 (423)
T KOG0313|consen   96 PKPLQCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK---SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQT  170 (423)
T ss_pred             CCccccccchhhhhhhccc--CceEEEeecCCeeEEEecCCc---eEEEEecCCcceeeeEEEecCCccceEEEecCCce
Confidence            3445566799999999987  889999999999999998643   477889999999988885433   36999999999


Q ss_pred             EEEEECCCCeE----EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        227 IAVWDLHNQTL----VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       227 i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      +++|.++.++.    +..-+||...|.++...+++.++++|+.|.+|.+|+..+....              .+.     
T Consensus       171 l~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~--------------~~E-----  231 (423)
T KOG0313|consen  171 LRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEED--------------ELE-----  231 (423)
T ss_pred             EEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccc--------------ccc-----
Confidence            99999887743    3334599999999999999999999999999999994332210              000     


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                          ..  +.         ....-.-.+-..+...+...+.+|..+|.++.|++..   .+.+++.|.+|+.||+.+++.
T Consensus       232 ----~~--s~---------~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~---v~yS~SwDHTIk~WDletg~~  293 (423)
T KOG0313|consen  232 ----SS--SN---------RRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDAT---VIYSVSWDHTIKVWDLETGGL  293 (423)
T ss_pred             ----cc--ch---------hhhhhhhhhhcccccCceEEecccccceeeEEEcCCC---ceEeecccceEEEEEeecccc
Confidence                00  00         0000011111223345677888999999999999944   689999999999999998765


Q ss_pred             CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-ceeecccCCCCceeEEEECCCC-CEEEEeeCC
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDS-KVCFSCCSD  460 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~~~-~~l~s~~~d  460 (504)
                      ...+.      ....++++..+|..++|++|+.|..|++||.+++.. .....+.+|...|.++.|+|.. .+|++++.|
T Consensus       294 ~~~~~------~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D  367 (423)
T KOG0313|consen  294 KSTLT------TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD  367 (423)
T ss_pred             eeeee------cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecC
Confidence            54443      356688999999999999999999999999987643 4466788999999999999954 567899999


Q ss_pred             CcEEEEEcCCcc-eEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        461 GNIAVWDLHNQT-LVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       461 g~i~iwd~~~~~-~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +++++||+++.+ .+..+.+|.+.|.++.|.. +..+++||.|++
T Consensus       368 ~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~  411 (423)
T KOG0313|consen  368 NTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNK  411 (423)
T ss_pred             CeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcce
Confidence            999999999987 8999999999999999984 679999999974

>KOG0316|consensus

Probab=100.00  E-value=2.5e-33  Score=220.79  Aligned_cols=285  Identities=18%  Similarity=0.300  Sum_probs=233.2

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +++..+ .|+++|.++.|+-+|++.++++ |.+|++|+...+...+...     +|...|..++.+.|...+++++.|..
T Consensus         8 kr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYs-----ghG~EVlD~~~s~Dnskf~s~GgDk~   82 (307)
T KOG0316|consen    8 KRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYS-----GHGHEVLDAALSSDNSKFASCGGDKA   82 (307)
T ss_pred             hhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeec-----CCCceeeeccccccccccccCCCCce
Confidence            345556 7999999999999999999888 9999999987764333332     78889999999999999999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      +.+||+++++.  ...+.+|...|+.+.|+.+...+++|+.|.++++||.++.  ++++.+......|.++...  +..|
T Consensus        83 v~vwDV~TGkv--~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heI  158 (307)
T KOG0316|consen   83 VQVWDVNTGKV--DRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEI  158 (307)
T ss_pred             EEEEEcccCee--eeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEE
Confidence            99999998774  7788999999999999999999999999999999999864  7888888888999999887  5689


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++|+.||+++.||++.|++                 .......+|++++|+++++..++++.|+++++.|-.++  +...
T Consensus       159 vaGS~DGtvRtydiR~G~l-----------------~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tG--klL~  219 (307)
T KOG0316|consen  159 VAGSVDGTVRTYDIRKGTL-----------------SSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETG--KLLK  219 (307)
T ss_pred             EeeccCCcEEEEEeeccee-----------------ehhhcCCcceeEEecCCCCEEEEeeccceeeecccchh--HHHH
Confidence            9999999999999999964                 33445678999999999999999999999999999888  4555


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc-eEEEEEcCCCCEEEEeeCCCcE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY-IRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      ...+|...-..+..+-......++++++||.+.+||+........+.     .+... +.++.++|.-..++++.. +.+
T Consensus       220 sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~-----~~~~v~v~dl~~hp~~~~f~~A~~-~~~  293 (307)
T KOG0316|consen  220 SYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLS-----VVSTVIVTDLSCHPTMDDFITATG-HGD  293 (307)
T ss_pred             HhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeec-----cCCceeEEeeecccCccceeEecC-Cce
Confidence            56666655555554444444489999999999999997654333222     22333 789999998877777754 445


Q ss_pred             EEee
Q psy17188        420 SIWD  423 (504)
Q Consensus       420 ~iwd  423 (504)
                      .+|.
T Consensus       294 ~~~~  297 (307)
T KOG0316|consen  294 LFWY  297 (307)
T ss_pred             ecee
Confidence            5664

>KOG0281|consensus

Probab=100.00  E-value=5.3e-35  Score=243.01  Aligned_cols=280  Identities=16%  Similarity=0.308  Sum_probs=233.2

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      ....|.|+.+  |...+++|..|++|+|||..+..  ....+.+|.+.|.|+.|  +.+.+++|+.|.+|++||++++++
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~--c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE--CLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHH--HHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCch
Confidence            3567899988  56679999999999999988644  46778999999999999  556999999999999999999999


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      +.++-+|...|..+.|+  +.++++++.|.++.+||+....-.            .......+|...|+.+.|+  .+++
T Consensus       270 l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~i------------t~rrVLvGHrAaVNvVdfd--~kyI  333 (499)
T KOG0281|consen  270 LNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDI------------TLRRVLVGHRAAVNVVDFD--DKYI  333 (499)
T ss_pred             hhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHH------------HHHHHHhhhhhheeeeccc--cceE
Confidence            99999999999999998  459999999999999999865310            0022345788889999986  4599


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      ++++.|.+|++|++.+.  .....+.+|...|.++.+...    ++++|+.|.+|++||++.+.....+     .+|+.-
T Consensus       334 VsASgDRTikvW~~st~--efvRtl~gHkRGIAClQYr~r----lvVSGSSDntIRlwdi~~G~cLRvL-----eGHEeL  402 (499)
T KOG0281|consen  334 VSASGDRTIKVWSTSTC--EFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRLWDIECGACLRVL-----EGHEEL  402 (499)
T ss_pred             EEecCCceEEEEeccce--eeehhhhcccccceehhccCe----EEEecCCCceEEEEeccccHHHHHH-----hchHHh
Confidence            99999999999999987  566778888888888776433    8999999999999999887544333     367888


Q ss_pred             eEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc-------eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      |.++.|.  .+.+++|..||+|++||+..+...       +...+..|.+.|..+.|  |...+++++.|.+|.|||+.+
T Consensus       403 vRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~  478 (499)
T KOG0281|consen  403 VRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLN  478 (499)
T ss_pred             hhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCC
Confidence            9999995  678999999999999999876433       45556678888999999  578899999999999999987


Q ss_pred             cceE
Q psy17188        471 QTLV  474 (504)
Q Consensus       471 ~~~~  474 (504)
                      +..-
T Consensus       479 ~~~~  482 (499)
T KOG0281|consen  479 GPPS  482 (499)
T ss_pred             CCcc
Confidence            7543

>KOG0643|consensus

Probab=100.00  E-value=6.6e-34  Score=228.20  Aligned_cols=283  Identities=17%  Similarity=0.283  Sum_probs=237.3

Q ss_pred             eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        197 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                      ..+.+|+.+++.+.++.+|.+|++++.|.+..+|-..+|+.+.++.+|.+.|.|++.+.+.+++++|+.|.++++||+.+
T Consensus         4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t   83 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET   83 (327)
T ss_pred             cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCC-----ccceeeeccCC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLASPT-----PRIKAELTSSA  346 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~~-----~~~~~~~~~~~  346 (504)
                      |+                .+........|..+.|+++|++++....     .+.|.++|++...     ..+...+..+.
T Consensus        84 Gk----------------~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~  147 (327)
T KOG0643|consen   84 GK----------------QLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD  147 (327)
T ss_pred             Cc----------------EEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc
Confidence            98                4555566788999999999998887754     3569999998432     23456667777


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      ..++.+-|.|-++  .+++|..+|.|.+||++++.......    ..|...|+.+++++|..++++++.|.+-++||..+
T Consensus       148 skit~a~Wg~l~~--~ii~Ghe~G~is~~da~~g~~~v~s~----~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t  221 (327)
T KOG0643|consen  148 SKITSALWGPLGE--TIIAGHEDGSISIYDARTGKELVDSD----EEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT  221 (327)
T ss_pred             cceeeeeecccCC--EEEEecCCCcEEEEEcccCceeeech----hhhccccccccccCCcceEEecccCccceeeeccc
Confidence            8999999999999  89999999999999999864332222    24677899999999999999999999999999987


Q ss_pred             CCcceeecccCCCCceeEEEECCCCCEEEEeeCCC--------------cEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        427 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------------NIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       427 ~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      .+.+....   ...+|++.+++|....++.|+...              .-++|++-..+.+.++++|-++|++++|+||
T Consensus       222 l~v~Kty~---te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPd  298 (327)
T KOG0643|consen  222 LEVLKTYT---TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPD  298 (327)
T ss_pred             eeeEEEee---ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCC
Confidence            65544433   345788899999877777665321              1234444445677889999999999999999


Q ss_pred             CCEEEEecCCCC
Q psy17188        493 GTKLWTGGLDNT  504 (504)
Q Consensus       493 ~~~l~s~s~Dgt  504 (504)
                      |+..++||+||.
T Consensus       299 GksYsSGGEDG~  310 (327)
T KOG0643|consen  299 GKSYSSGGEDGY  310 (327)
T ss_pred             CcccccCCCCce
Confidence            999999999984

>KOG0278|consensus

Probab=100.00  E-value=1.2e-34  Score=230.27  Aligned_cols=280  Identities=19%  Similarity=0.334  Sum_probs=247.8

Q ss_pred             eeeeecCcCceEEEEECC---CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        196 KAELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      .....+|..+|..++|+|   +|-+|++++.|+.=.+-+-++|.-+.+|.+|.+.|.+...+.+..+.++++.|-+-++|
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw   86 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVW   86 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhh
Confidence            455679999999999986   78899999999999999999999999999999999999999888889999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      |.-+|.                .+....|..-|.+++|+.|.++|++|+.+..+++||++..+ ....++.+|.+.|..+
T Consensus        87 ~a~tgd----------------elhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-App~E~~ghtg~Ir~v  149 (334)
T KOG0278|consen   87 DAVTGD----------------ELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-APPKEISGHTGGIRTV  149 (334)
T ss_pred             hhhhhh----------------hhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCC-CCchhhcCCCCcceeE
Confidence            999987                67778889999999999999999999999999999998865 4566788999999999


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      .|+...+  .+++...|++||+||.+++.....+      ..+.+|+++.++++|++|.++ ..+.|.+||.++-..+..
T Consensus       150 ~wc~eD~--~iLSSadd~tVRLWD~rTgt~v~sL------~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs  220 (334)
T KOG0278|consen  150 LWCHEDK--CILSSADDKTVRLWDHRTGTEVQSL------EFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKS  220 (334)
T ss_pred             EEeccCc--eEEeeccCCceEEEEeccCcEEEEE------ecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceee
Confidence            9998887  6777799999999999987544333      346778999999999977765 556799999998776665


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE-eecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..++.   .|.+..++|+...+++|++|+.++.||..+++.+..+ ++|.++|.|+.|+|||..-++||+|||
T Consensus       221 ~k~P~---nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGT  290 (334)
T KOG0278|consen  221 YKMPC---NVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGT  290 (334)
T ss_pred             ccCcc---ccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCce
Confidence            55544   4777799999999999999999999999999999986 899999999999999999999999997

>KOG0277|consensus

Probab=100.00  E-value=2.8e-33  Score=222.96  Aligned_cols=283  Identities=18%  Similarity=0.316  Sum_probs=232.0

Q ss_pred             EEEEEcC--CCcEEEEe-------cCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEE
Q psy17188        117 CAVTISN--PTKYVYTG-------GKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIW  186 (504)
Q Consensus       117 ~~v~~s~--~~~~l~~~-------~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw  186 (504)
                      .++.|||  +++++++.       +.|++.|-++..+.   .+.......-.+.+..++|+++ .+.+++++.||+++||
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~---gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~   88 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPK---GIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLF   88 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCC---CeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEe
Confidence            5788998  55555443       26889999986433   2333344456788999999994 5677888899999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEc
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGG  264 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~  264 (504)
                      |+... ...+..++.|...|.++.|++ ++..+++++.|++|++|+...++.++++.+|..-|...+|+| ..+.++++|
T Consensus        89 d~~~~-s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S  167 (311)
T KOG0277|consen   89 DLTMP-SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS  167 (311)
T ss_pred             ccCCC-CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence            96543 346778899999999999998 556788889999999999999999999999999999999999 678999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      .|+++++||++....               .+....|..++.++.|+. +.+.|++|+.|+.|+.||+++.+ .+..++.
T Consensus       168 gd~~l~lwdvr~~gk---------------~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~  231 (311)
T KOG0277|consen  168 GDGTLRLWDVRSPGK---------------FMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-TPLFELN  231 (311)
T ss_pred             CCceEEEEEecCCCc---------------eeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-ccceeec
Confidence            999999999886431               333556778899999998 66789999999999999999866 5677889


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEe
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIW  422 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iw  422 (504)
                      +|.-.|+.++|+|.... ++++++.|-+++|||...+.....    ....|...+..+.|++ ++.++|..+.|+.++||
T Consensus       232 gh~~AVRkvk~Sph~~~-lLaSasYDmT~riw~~~~~ds~~e----~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw  306 (311)
T KOG0277|consen  232 GHGLAVRKVKFSPHHAS-LLASASYDMTVRIWDPERQDSAIE----TVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVW  306 (311)
T ss_pred             CCceEEEEEecCcchhh-HhhhccccceEEecccccchhhhh----hhhccceEEeccccccccCceeeecccccceeee
Confidence            99999999999998876 899999999999999875432221    2236778888999998 67789999999999999


Q ss_pred             eC
Q psy17188        423 DL  424 (504)
Q Consensus       423 d~  424 (504)
                      +.
T Consensus       307 ~p  308 (311)
T KOG0277|consen  307 NP  308 (311)
T ss_pred             cc
Confidence            84

>KOG0281|consensus

Probab=100.00  E-value=3.7e-34  Score=238.03  Aligned_cols=275  Identities=17%  Similarity=0.342  Sum_probs=232.0

Q ss_pred             CCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188         70 GGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT  148 (504)
Q Consensus        70 ~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~  148 (504)
                      ..+.|||+..  |.+.+..++.++.+-+|+...........||++.|.|+.|.  .++|++|+ |.+|+|||+++++...
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~  271 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN  271 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh
Confidence            4577999998  55577788899999999876655555555999999999997  45889988 9999999999986554


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-cceeeeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  227 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  227 (504)
                      .+.     +|...|..+.|+  ..++++++.|.++.+||+..... .....+.+|...|+.+.|+  .+++++++.|.+|
T Consensus       272 tli-----hHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTi  342 (499)
T KOG0281|consen  272 TLI-----HHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTI  342 (499)
T ss_pred             HHh-----hhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceE
Confidence            443     799999999997  56899999999999999987652 2455678999999999995  5599999999999


Q ss_pred             EEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEE
Q psy17188        228 AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRS  307 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  307 (504)
                      ++|++.+++.++++.+|...|-|+.+.  ++++++|+.|.+|++||+..|.+               .....+|+.-|.+
T Consensus       343 kvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~c---------------LRvLeGHEeLvRc  405 (499)
T KOG0281|consen  343 KVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC---------------LRVLEGHEELVRC  405 (499)
T ss_pred             EEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccHH---------------HHHHhchHHhhhh
Confidence            999999999999999999999999885  88999999999999999999985               4455688899999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCCcc-------ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        308 VKLLPDGRTLIVGGEASNLSIWDLASPTPR-------IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      +.|.  .+.+++|..||+|++||+......       ....+..|.+.+..+.|..-    .+++++.|.+|.+||+...
T Consensus       406 iRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~f----qIvsssHddtILiWdFl~~  479 (499)
T KOG0281|consen  406 IRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF----QIISSSHDDTILIWDFLNG  479 (499)
T ss_pred             eeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecce----EEEeccCCCeEEEEEcCCC
Confidence            9995  568999999999999999876433       34455677888888888654    6889999999999998764

>KOG0275|consensus

Probab=100.00  E-value=2e-34  Score=237.51  Aligned_cols=295  Identities=16%  Similarity=0.271  Sum_probs=244.0

Q ss_pred             eeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceee---eeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        108 NTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQ---LDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       108 ~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ..++...-+-|..|||||++|++|+ ||.|.+|+..+++..+.++-   -.+.-++..|.|+.|+.|...||+|+.||.|
T Consensus       208 IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkI  287 (508)
T KOG0275|consen  208 IKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKI  287 (508)
T ss_pred             eecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcE
Confidence            4457788899999999999999999 99999999998865544322   2233478899999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ++|.+.++.+.... -..|...|+|+.|+.|+..+++++.|.++++.-+++|++++.+++|.+.|+...|.+||.+++++
T Consensus       288 KvWri~tG~ClRrF-drAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisa  366 (508)
T KOG0275|consen  288 KVWRIETGQCLRRF-DRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISA  366 (508)
T ss_pred             EEEEEecchHHHHh-hhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEe
Confidence            99999998864322 24789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      +.||+|++|+..+.++.             ..+.....+..|.++-.-| +...++++...+++++.++...-......-
T Consensus       367 SsDgtvkvW~~KtteC~-------------~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSG  433 (508)
T KOG0275|consen  367 SSDGTVKVWHGKTTECL-------------STFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSG  433 (508)
T ss_pred             cCCccEEEecCcchhhh-------------hhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccC
Confidence            99999999999988752             1344445667788888877 456788888999999998865322222222


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ....+...+...+|.|.  ++.+.+.|+.++.|....+.....+.     -|+..+..++-+|..+.||+-++||.+++|
T Consensus       434 kREgGdFi~~~lSpkGe--wiYcigED~vlYCF~~~sG~LE~tl~-----VhEkdvIGl~HHPHqNllAsYsEDgllKLW  506 (508)
T KOG0275|consen  434 KREGGDFINAILSPKGE--WIYCIGEDGVLYCFSVLSGKLERTLP-----VHEKDVIGLTHHPHQNLLASYSEDGLLKLW  506 (508)
T ss_pred             CccCCceEEEEecCCCc--EEEEEccCcEEEEEEeecCceeeeee-----cccccccccccCcccchhhhhcccchhhhc
Confidence            33455777888999999  68888899999999998876554443     356667789999999999999999999999


Q ss_pred             e
Q psy17188        423 D  423 (504)
Q Consensus       423 d  423 (504)
                      .
T Consensus       507 k  507 (508)
T KOG0275|consen  507 K  507 (508)
T ss_pred             C
Confidence            4

>KOG2106|consensus

Probab=100.00  E-value=1.6e-31  Score=232.97  Aligned_cols=402  Identities=17%  Similarity=0.243  Sum_probs=298.7

Q ss_pred             CCcceEEEECCC--CC-cccCCCCCC-cccCCCCCccccceeeecCCCcEEEEEEcC-CCcEEEEecCCeEEEEeCCCCC
Q psy17188         71 GKPAYSYHVTTD--GQ-MQPVPFPPD-ALIGPGIPRHARQINTLSHGEVVCAVTISN-PTKYVYTGGKGCVKVWDISQPG  145 (504)
Q Consensus        71 ~~~v~~~~~s~~--g~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~~~~d~~i~vw~~~~~~  145 (504)
                      ..-|.+++||+-  |. +.++....+ .+-.|+.++..+.-..-...+.|....|.| +..++++++.+.+..|+++.+.
T Consensus       154 ~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~  233 (626)
T KOG2106|consen  154 DRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGS  233 (626)
T ss_pred             cccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCc
Confidence            445788888853  32 334444333 344566665555444445678899999999 5577888889999999998875


Q ss_pred             CCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC
Q psy17188        146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      ..+....+.. ..+..|.|++|.++|+ +++|..+|.|.||+..+.+  .......|.+.|.+++...+|.+ ++|+.|.
T Consensus       234 l~k~~~~fek-~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~--~~k~~~aH~ggv~~L~~lr~Gtl-lSGgKDR  308 (626)
T KOG2106|consen  234 LVKRQGIFEK-REKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNR--ISKQVHAHDGGVFSLCMLRDGTL-LSGGKDR  308 (626)
T ss_pred             eEEEeecccc-ccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCce--EEeEeeecCCceEEEEEecCccE-eecCccc
Confidence            5444443333 2347899999999997 7899999999999986544  33444499999999999999965 4599999


Q ss_pred             cEEEEECCCCe----------------------------------------EEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        226 NIAVWDLHNQT----------------------------------------LVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       226 ~i~iwd~~~~~----------------------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      .|..||-.-.+                                        ......+|......++.+|+.+.+++++.
T Consensus       309 ki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gq  388 (626)
T KOG2106|consen  309 KIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQ  388 (626)
T ss_pred             eEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccC
Confidence            99999832110                                        00112468888999999999999999999


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      |+.+++|+  ..+                .........+..++.|+|.| .+++|+..|...+.|.++...   ..+...
T Consensus       389 dk~v~lW~--~~k----------------~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~l---v~~~~d  446 (626)
T KOG2106|consen  389 DKHVRLWN--DHK----------------LEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDL---VTIHTD  446 (626)
T ss_pred             cceEEEcc--CCc----------------eeEEEEecCceeEeeccCcc-eEEEeeccceEEEEeccccee---EEEEec
Confidence            99999999  333                22223446778999999999 999999999999999988432   222222


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ..++..++++|+|.  +++.++.|+.|.+|.+...+...... -.  -+..+|+.+.||+|+++|.+-+.|-.|..|...
T Consensus       447 ~~~ls~v~ysp~G~--~lAvgs~d~~iyiy~Vs~~g~~y~r~-~k--~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~  521 (626)
T KOG2106|consen  447 NEQLSVVRYSPDGA--FLAVGSHDNHIYIYRVSANGRKYSRV-GK--CSGSPITHLDWSSDSQFLVSNSGDYEILYWKPS  521 (626)
T ss_pred             CCceEEEEEcCCCC--EEEEecCCCeEEEEEECCCCcEEEEe-ee--ecCceeEEeeecCCCceEEeccCceEEEEEccc
Confidence            77999999999999  89999999999999998764332221 11  233899999999999999999999999999433


Q ss_pred             CCCcce----------------eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc---ceEEEEeecCCceEE
Q psy17188        426 SPTPRI----------------KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASC  486 (504)
Q Consensus       426 ~~~~~~----------------~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~  486 (504)
                      .-+...                ......+...+..++-+.+.+++|+|.+.|.|++|...--   .....+.+|.+-|++
T Consensus       522 ~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~  601 (626)
T KOG2106|consen  522 ECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTN  601 (626)
T ss_pred             cCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEE
Confidence            211110                0011234445666777788899999999999999986432   345677799999999


Q ss_pred             EEEccCCCEEEEecCCCC
Q psy17188        487 IDISADGTKLWTGGLDNT  504 (504)
Q Consensus       487 ~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++|..+...|++.+.|.+
T Consensus       602 V~Fl~~d~~li~tg~D~S  619 (626)
T KOG2106|consen  602 VAFLCKDSHLISTGKDTS  619 (626)
T ss_pred             EEEeeCCceEEecCCCce
Confidence            999999999999888753

>KOG0288|consensus

Probab=100.00  E-value=2.8e-34  Score=243.94  Aligned_cols=287  Identities=18%  Similarity=0.330  Sum_probs=242.4

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                      ..|.+.+..+.|-++...|++|+.|..|++|++...+......+.+..+.|+.+.|.++++++++++.|+.+++|++.+.
T Consensus       172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~  251 (459)
T KOG0288|consen  172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL  251 (459)
T ss_pred             hccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch
Confidence            36889999999999999999999999999999988877778888899999999999999999999999999999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      +...++.+|.+.|+++.|......+++|+.|.+|+.||+....+.                ...-....+..|..+  ..
T Consensus       252 r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~----------------kt~l~~S~cnDI~~~--~~  313 (459)
T KOG0288|consen  252 RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCS----------------KTVLPGSQCNDIVCS--IS  313 (459)
T ss_pred             hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhee----------------ccccccccccceEec--ce
Confidence            999999999999999999887777999999999999999986642                112223334555554  45


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      .++++..|++|++||.++.....  ..+.+. .|+++..++++.  -+.+.+.|.++.+.|+++.+...+...... ...
T Consensus       314 ~~~SgH~DkkvRfwD~Rs~~~~~--sv~~gg-~vtSl~ls~~g~--~lLsssRDdtl~viDlRt~eI~~~~sA~g~-k~a  387 (459)
T KOG0288|consen  314 DVISGHFDKKVRFWDIRSADKTR--SVPLGG-RVTSLDLSMDGL--ELLSSSRDDTLKVIDLRTKEIRQTFSAEGF-KCA  387 (459)
T ss_pred             eeeecccccceEEEeccCCceee--EeecCc-ceeeEeeccCCe--EEeeecCCCceeeeecccccEEEEeecccc-ccc
Confidence            68889999999999999875443  333333 999999999998  567779999999999998655444433222 223


Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ...+.+.|||++.|+++|+.||.|+||++.+++.............|++++|+|.|..|++++.++.+.+|
T Consensus       388 sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  388 SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             cccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence            34889999999999999999999999999999887777777666689999999999999999999999999

>KOG1446|consensus

Probab=100.00  E-value=3.5e-31  Score=218.33  Aligned_cols=283  Identities=16%  Similarity=0.244  Sum_probs=234.0

Q ss_pred             eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC--CCeEEEEECC
Q psy17188        198 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL--DNTVRSWDLR  275 (504)
Q Consensus       198 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~  275 (504)
                      .+......|.++.|+++|.+|++++.|.++++||..+++.++++..+.-.+..++|....+.++.++.  |.+|+..++.
T Consensus         9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~   88 (311)
T KOG1446|consen    9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH   88 (311)
T ss_pred             ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence            34445677999999999999999999999999999999999999988889999999887777777776  8899999999


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      +.+.               .....+|...|.+++.+|-+..+++++.|++|++||++..+..-.....    .-...++.
T Consensus        89 dNky---------------lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~----~~pi~AfD  149 (311)
T KOG1446|consen   89 DNKY---------------LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS----GRPIAAFD  149 (311)
T ss_pred             cCce---------------EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC----CCcceeEC
Confidence            8875               4556789999999999999999999999999999999976554444333    33467889


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      |+|-  +++++.....|++||++.-....-...........+.+.+.|||||++|+.++..+.+++.|.-+|..+.....
T Consensus       150 p~GL--ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~  227 (311)
T KOG1446|consen  150 PEGL--IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSG  227 (311)
T ss_pred             CCCc--EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEee
Confidence            9987  78888777799999998753322221111124567789999999999999999999999999998886665554


Q ss_pred             cCCCCce-eEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCCCEEEEecC
Q psy17188        436 TSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       436 ~~~~~~v-~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ......+ ....|+||++++++|+.||+|.+|++++++.+..+.+ +.+++.++.|+|.-..+++++.
T Consensus       228 ~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s  295 (311)
T KOG1446|consen  228 YPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS  295 (311)
T ss_pred             ccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCc
Confidence            4333322 4568999999999999999999999999999999998 6889999999999888888875

>KOG0643|consensus

Probab=100.00  E-value=1.1e-31  Score=215.38  Aligned_cols=296  Identities=17%  Similarity=0.234  Sum_probs=237.8

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +.+|+.+++.+.++.+|.+|.+++.|.+..+|-..+++  ..-...+|.+.|+|+...-+.+.+++|+.|.++++||+++
T Consensus         6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe--rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t   83 (327)
T KOG0643|consen    6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE--RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET   83 (327)
T ss_pred             cccCccccceEEecCCCcEEEEecCCCCceEEEecCCc--eeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence            34899999999999999999999999999999877655  3778999999999999999999999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcC-----CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGL-----DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      |+++.+++ ...+|..+.|+++|++++....     .+.|.++|++.....      ..+..+  .+....++..++.+-
T Consensus        84 Gk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~------~~s~ep--~~kI~t~~skit~a~  154 (327)
T KOG0643|consen   84 GKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSD------IDSEEP--YLKIPTPDSKITSAL  154 (327)
T ss_pred             CcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhh------hcccCc--eEEecCCccceeeee
Confidence            99999998 7789999999999988776653     357888888754310      001111  334445668899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      |.|-+++|++|.++|.|.+||++++. ........|...|..+.++++..  ++++++.|.+-++||.++....      
T Consensus       155 Wg~l~~~ii~Ghe~G~is~~da~~g~-~~v~s~~~h~~~Ind~q~s~d~T--~FiT~s~Dttakl~D~~tl~v~------  225 (327)
T KOG0643|consen  155 WGPLGETIIAGHEDGSISIYDARTGK-ELVDSDEEHSSKINDLQFSRDRT--YFITGSKDTTAKLVDVRTLEVL------  225 (327)
T ss_pred             ecccCCEEEEecCCCcEEEEEcccCc-eeeechhhhccccccccccCCcc--eEEecccCccceeeeccceeeE------
Confidence            99999999999999999999999874 34445566777999999999999  8999999999999999864333      


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCc--EEEeeCCCCCc----------ceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASN--LSIWDLASPTP----------RIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~iwd~~~~~~----------~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      +......++++.+++|....++.|+....  |.-=+.+.++.          ...-..++|-++|++++|+|+|+..++|
T Consensus       226 Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSG  305 (327)
T KOG0643|consen  226 KTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSG  305 (327)
T ss_pred             EEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccC
Confidence            23345678999999998888887754332  22222222211          1123467899999999999999999999


Q ss_pred             eCCCcEEEEEcCC
Q psy17188        458 CSDGNIAVWDLHN  470 (504)
Q Consensus       458 ~~dg~i~iwd~~~  470 (504)
                      ++||.||+..++.
T Consensus       306 GEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  306 GEDGYVRLHHFDS  318 (327)
T ss_pred             CCCceEEEEEecc
Confidence            9999999986654

>KOG0283|consensus

Probab=100.00  E-value=1.3e-32  Score=254.99  Aligned_cols=292  Identities=18%  Similarity=0.318  Sum_probs=212.9

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeee------ecCCCCceEEEEEcc---CCC--EEEEec
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD------CLQRDNYIRSVKLLP---DGR--TLIVGG  178 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~---~~~--~l~~~~  178 (504)
                      .|.+.|.++.||+||+|||+++ |+.|+||.+...+.. .+....      .....+.+..+.-++   .++  ..-.+.
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~-~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERM-RVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchh-cccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            6999999999999999999999 999999998652210 000000      000000011111111   011  111122


Q ss_pred             CCCcEEEEeCCCC--CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-
Q psy17188        179 EASNLSIWDLASP--TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-  255 (504)
Q Consensus       179 ~dg~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-  255 (504)
                      .... .+.+....  .......+.+|.+.|.++.|+.++ +|++++.|.+|++|++...++++.|. |..-|+|++|+| 
T Consensus       344 ~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPv  420 (712)
T KOG0283|consen  344 QSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPV  420 (712)
T ss_pred             CCcc-ccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEeccc
Confidence            2222 22222111  233467789999999999999765 89999999999999999999999998 999999999999 


Q ss_pred             CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC
Q psy17188        256 DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  335 (504)
Q Consensus       256 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~  335 (504)
                      |.+++++|+.||.||||++...++..|.                ....-|++++|.|+|+..++|+.+|.+++|+....+
T Consensus       421 DDryFiSGSLD~KvRiWsI~d~~Vv~W~----------------Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk  484 (712)
T KOG0283|consen  421 DDRYFISGSLDGKVRLWSISDKKVVDWN----------------DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLK  484 (712)
T ss_pred             CCCcEeecccccceEEeecCcCeeEeeh----------------hhhhhheeEEeccCCceEEEEEeccEEEEEEccCCe
Confidence            8889999999999999999998865553                334679999999999999999999999999998776


Q ss_pred             ccceeeeccC------CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        336 PRIKAELTSS------APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       336 ~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                      ......+..+      ...|+.+.+.|.... -+++.+.|..|||||.+.......+   +.......-....|+.||++
T Consensus       485 ~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~-~vLVTSnDSrIRI~d~~~~~lv~Kf---KG~~n~~SQ~~Asfs~Dgk~  560 (712)
T KOG0283|consen  485 LVSDFHIRLHNKKKKQGKRITGLQFFPGDPD-EVLVTSNDSRIRIYDGRDKDLVHKF---KGFRNTSSQISASFSSDGKH  560 (712)
T ss_pred             EEEeeeEeeccCccccCceeeeeEecCCCCC-eEEEecCCCceEEEeccchhhhhhh---cccccCCcceeeeEccCCCE
Confidence            5544444332      337999999987765 5666778999999999654333322   22233344458899999999


Q ss_pred             EEEeeCCCcEEEeeCCC
Q psy17188        410 LIVGGEASNLSIWDLAS  426 (504)
Q Consensus       410 l~~~~~dg~i~iwd~~~  426 (504)
                      |+++++|..|++|+...
T Consensus       561 IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  561 IVSASEDSWVYIWKNDS  577 (712)
T ss_pred             EEEeecCceEEEEeCCC
Confidence            99999999999999743

>KOG2048|consensus

Probab=100.00  E-value=3.4e-30  Score=232.63  Aligned_cols=405  Identities=14%  Similarity=0.176  Sum_probs=298.4

Q ss_pred             cceEEEECCCCCcccCCCCCCcccCCCCCccccceeee--cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCce
Q psy17188         73 PAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPV  150 (504)
Q Consensus        73 ~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~  150 (504)
                      .+.+++++...+.++++=.++.+=+|+....--+...+  +-+..|.+++|++.++++.++.+|.|.-||+.+.+..   
T Consensus        27 ~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~---  103 (691)
T KOG2048|consen   27 EIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQK---  103 (691)
T ss_pred             ceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCcee---
Confidence            58889999888888888888888888876665444444  4567899999998888888888999999999886432   


Q ss_pred             eeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        151 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       151 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      ....  ...+.|.+++.+|.+..++.|++||.+..++...+.......+....+.|.++.|+|++..++.|+.||.|++|
T Consensus       104 ~~~d--~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw  181 (691)
T KOG2048|consen  104 YNID--SNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW  181 (691)
T ss_pred             EEec--CCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence            2222  45788999999999999999999998888888776665666666777899999999999999999999999999


Q ss_pred             ECCCCeEEEeec-------C-CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        231 DLHNQTLVRQFQ-------G-HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       231 d~~~~~~~~~~~-------~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      |..++..+....       . ...-|.++.|..++ .|++|..-|+|.+||...+.+               ......|.
T Consensus       182 d~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTL---------------iqS~~~h~  245 (691)
T KOG2048|consen  182 DVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTL---------------IQSHSCHD  245 (691)
T ss_pred             EcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcch---------------hhhhhhhh
Confidence            999998776321       1 23346777777665 799999999999999998874               33345678


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      ..|.+++..++++++++++.|+.|..|...+...  ........|...+.+++..++    .+++|+.|..+.+-..+..
T Consensus       246 adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~----~l~sgG~d~~l~i~~s~~~  321 (691)
T KOG2048|consen  246 ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN----ALISGGRDFTLAICSSREF  321 (691)
T ss_pred             cceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc----eEEecceeeEEEEcccccc
Confidence            8899999999999999999999999998776533  233444567778888888877    5677777766555443220


Q ss_pred             CC------------------------------------------C---Cccccc-ccccCCCceEEEEEcCCCCEEEEee
Q psy17188        381 GS------------------------------------------K---TPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       381 ~~------------------------------------------~---~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      ..                                          .   .....+ -.......|.+.+.||+|++++.+.
T Consensus       322 ~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st  401 (691)
T KOG2048|consen  322 KNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIST  401 (691)
T ss_pred             CchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEee
Confidence            00                                          0   000000 0112345688999999999999876


Q ss_pred             CCCcEEEeeCCC------------------------------------------------CCccee--ecccCCCCceeE
Q psy17188        415 EASNLSIWDLAS------------------------------------------------PTPRIK--AELTSSAPACYA  444 (504)
Q Consensus       415 ~dg~i~iwd~~~------------------------------------------------~~~~~~--~~~~~~~~~v~~  444 (504)
                      - ...+||.++.                                                +.....  .........|..
T Consensus       402 ~-~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~  480 (691)
T KOG2048|consen  402 V-SRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISR  480 (691)
T ss_pred             c-cceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCccee
Confidence            2 1233333321                                                111100  011123456889


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc-CCCEEEEecCCC
Q psy17188        445 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDN  503 (504)
Q Consensus       445 l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~s~s~Dg  503 (504)
                      +..+++|++||+.+.+|.|.+|++++++.-.....-...++.++|+| +.+.|+.+..|+
T Consensus       481 l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~n  540 (691)
T KOG2048|consen  481 LVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNN  540 (691)
T ss_pred             EEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCC
Confidence            99999999999999999999999999876554434557899999995 566777776664

>KOG2106|consensus

Probab=100.00  E-value=1.1e-29  Score=221.52  Aligned_cols=395  Identities=15%  Similarity=0.202  Sum_probs=282.3

Q ss_pred             cCCCCCCCcceEEEECCCCCcccCCCCCC--------cccCCCCCccccceeee-cCCCcEEEEEEcC--CCcEEEEec-
Q psy17188         65 LAGIPGGKPAYSYHVTTDGQMQPVPFPPD--------ALIGPGIPRHARQINTL-SHGEVVCAVTISN--PTKYVYTGG-  132 (504)
Q Consensus        65 ~~~~~~~~~v~~~~~s~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~--~~~~l~~~~-  132 (504)
                      ..+|  +..+.|++++||-...+.+-...        .+.+|+.- ....++.+ .-+..|+|++||+  .|.+|..-+ 
T Consensus       100 y~GH--~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv-~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~  176 (626)
T KOG2106|consen  100 YLGH--NDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSV-TLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDD  176 (626)
T ss_pred             ccCC--CCceEEEeecCCceeeccCcccccCCCcCCCeeeecccc-cceeeeeeccccccceeeeecccCCCceEEEecC
Confidence            3355  67799999998754333211111        12223211 12223333 4567899999997  566666554 


Q ss_pred             --CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee-eeec-CcCceEE
Q psy17188        133 --KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELTS-SAPACYA  208 (504)
Q Consensus       133 --d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~-~~~~v~~  208 (504)
                        +..+.|||++.+....++..     ....|....|.|.+..|+.....+.+.+|+++.+...... .+.. ....|.|
T Consensus       177 s~~h~lSVWdWqk~~~~~~vk~-----sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~  251 (626)
T KOG2106|consen  177 SNPHMLSVWDWQKKAKLGPVKT-----SNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLC  251 (626)
T ss_pred             CCccccchhhchhhhccCccee-----ccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEE
Confidence              56799999988655555543     3466889999996655555555789999999876532221 1111 2356999


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188        209 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG  288 (504)
Q Consensus       209 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~  288 (504)
                      ++|.++|+ +++|..+|.|.||+..+.+..+....|.+.|.+++...+|. |++|+.|..|..||-.-.+.+        
T Consensus       252 v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~k~r--------  321 (626)
T KOG2106|consen  252 VTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYRKLR--------  321 (626)
T ss_pred             EEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCcc-EeecCccceEEeccccccccc--------
Confidence            99999985 67999999999999998888888779999999999999995 566999999999993322221        


Q ss_pred             CCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                            ........+.++.++-...+  |++|...+.|..=.++.   .......+|......++.+|+..  .+++++.
T Consensus       322 ------~~elPe~~G~iRtv~e~~~d--i~vGTtrN~iL~Gt~~~---~f~~~v~gh~delwgla~hps~~--q~~T~gq  388 (626)
T KOG2106|consen  322 ------ETELPEQFGPIRTVAEGKGD--ILVGTTRNFILQGTLEN---GFTLTVQGHGDELWGLATHPSKN--QLLTCGQ  388 (626)
T ss_pred             ------cccCchhcCCeeEEecCCCc--EEEeeccceEEEeeecC---CceEEEEecccceeeEEcCCChh--heeeccC
Confidence                  33344455667776644333  77777766665555544   34556677888999999999988  7999999


Q ss_pred             CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188        369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      |+.+++|+-..    ....    .....+..++.|+|.| .+|.|+..|...+.|.++...+..   +.....++.+.|+
T Consensus       389 dk~v~lW~~~k----~~wt----~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~---~~d~~~ls~v~ys  456 (626)
T KOG2106|consen  389 DKHVRLWNDHK----LEWT----KIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTI---HTDNEQLSVVRYS  456 (626)
T ss_pred             cceEEEccCCc----eeEE----EEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEE---EecCCceEEEEEc
Confidence            99999999211    1111    1235667799999999 999999999999999987433322   2227789999999


Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCc-ceEEEE-eecCCceEEEEEccCCCEEEEecCC
Q psy17188        449 PDSKVCFSCCSDGNIAVWDLHNQ-TLVRQF-QGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       449 ~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      |+|.+||.|+.|+.|+||.+... ...... +.|..+|+.++||+|+++|.+-+-|
T Consensus       457 p~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d  512 (626)
T KOG2106|consen  457 PDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGD  512 (626)
T ss_pred             CCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCc
Confidence            99999999999999999998654 333322 2344789999999999999987765

>KOG0772|consensus

Probab=100.00  E-value=5e-32  Score=236.64  Aligned_cols=299  Identities=18%  Similarity=0.284  Sum_probs=231.3

Q ss_pred             eeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        152 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+.+.+|...|.++++.|.|..|++|+.|..|++||+......   .....+.....|.++.|++.+..|++.+.....+
T Consensus       160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak  239 (641)
T KOG0772|consen  160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK  239 (641)
T ss_pred             eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence            3455578889999999999999999999999999999754322   1222334455699999999999999998889999


Q ss_pred             EEECCCCeEEEe------------ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCce--EEEeecCCCCCCCc
Q psy17188        229 VWDLHNQTLVRQ------------FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCV--KVWDISQPGSKTPV  293 (504)
Q Consensus       229 iwd~~~~~~~~~------------~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~--~~~~~~~~~~~~~~  293 (504)
                      |+|-+..+.+..            -++|...++|.+|+|+. ..+++++.||++|+||+..-+-  +++.          
T Consensus       240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik----------  309 (641)
T KOG0772|consen  240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIK----------  309 (641)
T ss_pred             EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEe----------
Confidence            999554433322            25799999999999964 4789999999999999987542  2221          


Q ss_pred             ccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee-eccCCC--ceeeEEECCCCCCceeeeccCCC
Q psy17188        294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAP--ACYALAISPDSKSPFFSSHHYKS  370 (504)
Q Consensus       294 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~  370 (504)
                       ........-.++.++|+++|+.|++|+.||.|++|+........... -..|..  .|++++|+++|+  ++++-+.|+
T Consensus       310 -~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~--~LlSRg~D~  386 (641)
T KOG0772|consen  310 -TKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN--YLLSRGFDD  386 (641)
T ss_pred             -eccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccc--hhhhccCCC
Confidence             22222445568999999999999999999999999986554333332 334554  899999999999  899999999


Q ss_pred             eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC------CCcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188        371 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYA  444 (504)
Q Consensus       371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  444 (504)
                      ++++||+++...  ++...........-+.++|||+.++|++|..      .|.+.+||..+...+....+  ....|..
T Consensus       387 tLKvWDLrq~kk--pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i--~~aSvv~  462 (641)
T KOG0772|consen  387 TLKVWDLRQFKK--PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDI--STASVVR  462 (641)
T ss_pred             ceeeeecccccc--chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecC--CCceEEE
Confidence            999999997543  3333333344555679999999999999854      46799999887655544444  4677899


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEE
Q psy17188        445 LAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       445 l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      +.|+|.-+.|++++.||.+++|=
T Consensus       463 ~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  463 CLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             EeecchhhheeeecCCCceEEEE
Confidence            99999999999999999999973

>KOG0640|consensus

Probab=100.00  E-value=2.5e-32  Score=223.78  Aligned_cols=290  Identities=19%  Similarity=0.309  Sum_probs=239.1

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC------------------eEEEeecCCCCCeEEEEEccCC
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ------------------TLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~------------------~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      ...+..|..++.+.+|++||.++++|+.|..|+|.|++..                  ..++++-.|...|+++.|+|..
T Consensus       105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre  184 (430)
T KOG0640|consen  105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE  184 (430)
T ss_pred             eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence            4567889999999999999999999999999999998621                  3577888899999999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ..|++++.|++|+++|+..-..+             ..+.......+|.++.|+|.|.+|++|..-..+++||+++.+.-
T Consensus       185 ~ILiS~srD~tvKlFDfsK~saK-------------rA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcf  251 (430)
T KOG0640|consen  185 TILISGSRDNTVKLFDFSKTSAK-------------RAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCF  251 (430)
T ss_pred             heEEeccCCCeEEEEecccHHHH-------------HHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEe
Confidence            99999999999999999765422             13444566678999999999999999999999999999987643


Q ss_pred             cee-eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        338 IKA-ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       338 ~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      ... .-..|...|+++.+++.++  ++++++.||.|++||--....   +..+........|.+..|..+|+++++.+.|
T Consensus       252 vsanPd~qht~ai~~V~Ys~t~~--lYvTaSkDG~IklwDGVS~rC---v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~D  326 (430)
T KOG0640|consen  252 VSANPDDQHTGAITQVRYSSTGS--LYVTASKDGAIKLWDGVSNRC---VRTIGNAHGGSEVCSAVFTKNGKYILSSGKD  326 (430)
T ss_pred             eecCcccccccceeEEEecCCcc--EEEEeccCCcEEeeccccHHH---HHHHHhhcCCceeeeEEEccCCeEEeecCCc
Confidence            332 3356888999999999999  999999999999999655433   3333444556789999999999999999999


Q ss_pred             CcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEe-ecCCceEEEEEcc
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISA  491 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~s~  491 (504)
                      ..+++|.+.++..+......+..   ..-+...|+....|++.-.+ .+.+.-||.++...+..+. +|.+.+..+.-||
T Consensus       327 S~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP  406 (430)
T KOG0640|consen  327 STVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSP  406 (430)
T ss_pred             ceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCC
Confidence            99999999999877666544222   22344578888888887654 5679999999987665544 7999999999999


Q ss_pred             CCCEEEEecCCC
Q psy17188        492 DGTKLWTGGLDN  503 (504)
Q Consensus       492 d~~~l~s~s~Dg  503 (504)
                      .+.-++++|.|.
T Consensus       407 ~~p~FmTcsdD~  418 (430)
T KOG0640|consen  407 VEPAFMTCSDDF  418 (430)
T ss_pred             CCCceeeecccc
Confidence            999999999985

>KOG0640|consensus

Probab=100.00  E-value=1.6e-31  Score=219.12  Aligned_cols=303  Identities=12%  Similarity=0.211  Sum_probs=233.9

Q ss_pred             cceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCC------------CCCCCc-eeeeeecCCCCceEEEEEccC
Q psy17188        105 RQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQ------------PGSKTP-VSQLDCLQRDNYIRSVKLLPD  170 (504)
Q Consensus       105 ~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~------------~~~~~~-~~~~~~~~~~~~v~~~~~s~~  170 (504)
                      +....-.|+.++.+-+|++||.++|+|+ |..|+|.|++.            ++.... .....+..|...|+++.|.|.
T Consensus       104 Et~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr  183 (430)
T KOG0640|consen  104 ETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR  183 (430)
T ss_pred             ceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence            3344448999999999999999999999 99999999862            111111 122345579999999999999


Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCC
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDG  247 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~  247 (504)
                      ...|++|+.|++|+++|+.....+.....-....+|.++.|+|.|.+|++|..-.++++||+++-++...-   .+|.+.
T Consensus       184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a  263 (430)
T KOG0640|consen  184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA  263 (430)
T ss_pred             hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence            99999999999999999986554444444455667999999999999999999999999999998776543   459999


Q ss_pred             eEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEE
Q psy17188        248 ASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  327 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  327 (504)
                      |+++.+++.+++.++++.||.|++||--++++.             ..+........|.+..|..+++++++.+.|..++
T Consensus       264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv-------------~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vk  330 (430)
T KOG0640|consen  264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCV-------------RTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVK  330 (430)
T ss_pred             eeEEEecCCccEEEEeccCCcEEeeccccHHHH-------------HHHHhhcCCceeeeEEEccCCeEEeecCCcceee
Confidence            999999999999999999999999997776531             2344444567899999999999999999999999


Q ss_pred             EEeCCCCCccceeeeccCCC---ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        328 IWDLASPTPRIKAELTSSAP---ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      +|.+.++.......-.+..+   .-+...|+..... .+.--...+.+.-||.++.......    ..+|++.+..+.-|
T Consensus       331 LWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdy-Vl~pDEas~slcsWdaRtadr~~l~----slgHn~a~R~i~HS  405 (430)
T KOG0640|consen  331 LWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDY-VLFPDEASNSLCSWDARTADRVALL----SLGHNGAVRWIVHS  405 (430)
T ss_pred             eeeecCCceEEEEecCCcccchhhhhhhhhcCccce-EEccccccCceeeccccchhhhhhc----ccCCCCCceEEEeC
Confidence            99999886544433322111   1122233333332 2333334677889999876544333    34799999999999


Q ss_pred             CCCCEEEEeeCCCcEEEeeCC
Q psy17188        405 PDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      |.+.-+++++.|-.+++|--+
T Consensus       406 P~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  406 PVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             CCCCceeeecccceeeeeeec
Confidence            999999999999999999643

>KOG1063|consensus

Probab=100.00  E-value=3.2e-31  Score=239.69  Aligned_cols=414  Identities=16%  Similarity=0.237  Sum_probs=297.8

Q ss_pred             ccCCCCCCcccCCCC-Cccccceeee-cCCCcEEEEEEcCCC---cEEEEec-CCeEEEEeCCCCCCCC-----------
Q psy17188         86 QPVPFPPDALIGPGI-PRHARQINTL-SHGEVVCAVTISNPT---KYVYTGG-KGCVKVWDISQPGSKT-----------  148 (504)
Q Consensus        86 ~~~~~~~~~~~~~~~-~~~~~~~~~~-~h~~~V~~v~~s~~~---~~l~~~~-d~~i~vw~~~~~~~~~-----------  148 (504)
                      ++++..+..+.++.. ..+.+.+..+ ||.+.|.+++|...+   .+||+++ |..||||.+.-+....           
T Consensus       162 la~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~  241 (764)
T KOG1063|consen  162 LACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTL  241 (764)
T ss_pred             EEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccc
Confidence            344444444433332 2344556666 999999999999643   4778888 9999999875433111           


Q ss_pred             ----cee---ee--------eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccce-----eeeecCcCceEE
Q psy17188        149 ----PVS---QL--------DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK-----AELTSSAPACYA  208 (504)
Q Consensus       149 ----~~~---~~--------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~~~~~v~~  208 (504)
                          ...   .+        -..+|++.|.++.|.|.+..|++++.|.++.+|...+......     -.+.+.......
T Consensus       242 ~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g  321 (764)
T KOG1063|consen  242 SNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWG  321 (764)
T ss_pred             cCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceee
Confidence                000   01        1238999999999999999999999999999999876543222     222344556889


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCc-------
Q psy17188        209 LAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC-------  278 (504)
Q Consensus       209 ~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~-------  278 (504)
                      ..|+|+++.+++-+..|..++|..++.   .....+.||.+.|++++|+|.|.+|++.+.|.+-|++-.-..+       
T Consensus       322 ~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEia  401 (764)
T KOG1063|consen  322 GLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIA  401 (764)
T ss_pred             EEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeec
Confidence            999999999999999999999983332   3445578999999999999999999999999988887543000       


Q ss_pred             -----------------------------eEEEeec--------------------------------------------
Q psy17188        279 -----------------------------VKVWDIS--------------------------------------------  285 (504)
Q Consensus       279 -----------------------------~~~~~~~--------------------------------------------  285 (504)
                                                   +++++.+                                            
T Consensus       402 RPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~  481 (764)
T KOG1063|consen  402 RPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNT  481 (764)
T ss_pred             ccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccccc
Confidence                                         0011000                                            


Q ss_pred             ---------CC-------CCCCC-----------cccceecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCC
Q psy17188        286 ---------QP-------GSKTP-----------VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLAS  333 (504)
Q Consensus       286 ---------~~-------~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~  333 (504)
                               .+       ....|           ....+..+|...|.+++.+|+++++++++...     .|++|+..+
T Consensus       482 G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~  561 (764)
T KOG1063|consen  482 GGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN  561 (764)
T ss_pred             ccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc
Confidence                     00       00000           01123456888999999999999999987654     489998776


Q ss_pred             CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe
Q psy17188        334 PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  413 (504)
Q Consensus       334 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~  413 (504)
                      .  .....+..|.-.|+.++|+||++  ++++.+.|.++.+|....... ..........|..-|.++.|+|++.+++++
T Consensus       562 W--~~~~~L~~HsLTVT~l~FSpdg~--~LLsvsRDRt~sl~~~~~~~~-~e~~fa~~k~HtRIIWdcsW~pde~~FaTa  636 (764)
T KOG1063|consen  562 W--LQVQELEGHSLTVTRLAFSPDGR--YLLSVSRDRTVSLYEVQEDIK-DEFRFACLKAHTRIIWDCSWSPDEKYFATA  636 (764)
T ss_pred             h--hhhheecccceEEEEEEECCCCc--EEEEeecCceEEeeeeecccc-hhhhhccccccceEEEEcccCcccceeEEe
Confidence            5  55568899999999999999999  899999999999999854322 111222245688889999999999999999


Q ss_pred             eCCCcEEEeeCCCC--CcceeecccCCCCceeEEEECC-----CCCEEEEeeCCCcEEEEEcCC-------cc-----eE
Q psy17188        414 GEASNLSIWDLASP--TPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHN-------QT-----LV  474 (504)
Q Consensus       414 ~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~s~-----~~~~l~s~~~dg~i~iwd~~~-------~~-----~~  474 (504)
                      +.|.+|++|.....  +.+.......+..+|+++++.|     .+..++.|-+.|.|.+|....       +.     .+
T Consensus       637 SRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l  716 (764)
T KOG1063|consen  637 SRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRL  716 (764)
T ss_pred             cCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeecccc
Confidence            99999999998876  4344434556778899999987     233678888999999998651       11     11


Q ss_pred             EEEeecCCceEEEEEccC----------CCEEEEecCCCC
Q psy17188        475 RQFQGHTDGASCIDISAD----------GTKLWTGGLDNT  504 (504)
Q Consensus       475 ~~~~~h~~~v~~~~~s~d----------~~~l~s~s~Dgt  504 (504)
                      ....+|.+.|+.+.|.|.          ...|++|++|.+
T Consensus       717 ~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~  756 (764)
T KOG1063|consen  717 CATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDES  756 (764)
T ss_pred             ccccChHHhhheeEeccccccccccccceeEEeeecccce
Confidence            122357788999999975          235689998853

>KOG1446|consensus

Probab=100.00  E-value=2.1e-30  Score=213.74  Aligned_cols=286  Identities=19%  Similarity=0.283  Sum_probs=226.2

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCC
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQ  235 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~  235 (504)
                      ..+.|+++.|+++|.+|++++.|.+++|||..+++.  ...+..+.-.+..++|....+.++.++.  |.+|+..++.+.
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~--~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN   90 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQ--VKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN   90 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCce--eeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC
Confidence            467899999999999999999999999999997764  5556666666888889877777776666  889999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      +.++.|.||...|.+++.+|-+..+++++.|++|++||++..++..             .    .+...-..++|+|+|-
T Consensus        91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg-------------~----l~~~~~pi~AfDp~GL  153 (311)
T KOG1446|consen   91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQG-------------L----LNLSGRPIAAFDPEGL  153 (311)
T ss_pred             ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCce-------------E----EecCCCcceeECCCCc
Confidence            9999999999999999999988999999999999999999765421             1    1112234578999999


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeec---cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELT---SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL  392 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  392 (504)
                      ++|++.....|++||++.-...+...+.   ........+.|+|||+  .++.+...+.+.+.|.-.+.....+......
T Consensus       154 ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK--~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~  231 (311)
T KOG1446|consen  154 IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGK--SILLSTNASFIYLLDAFDGTVKSTFSGYPNA  231 (311)
T ss_pred             EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCC--EEEEEeCCCcEEEEEccCCcEeeeEeeccCC
Confidence            9999988889999999976544433333   3366889999999999  6667777888999998776533333322211


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                        ..--...+|+||++++++|+.||+|.+|+++++......... +..++.++.|+|.-.++++++  ..+.+|=..
T Consensus       232 --~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~-~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~  303 (311)
T KOG1446|consen  232 --GNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP-NGGPVSCVRFNPRYAMFVSAS--SNLVFWLPD  303 (311)
T ss_pred             --CCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC-CCCCccccccCCceeeeeecC--ceEEEEecc
Confidence              112258899999999999999999999999998776655443 677889999999877777764  457777543

>KOG0310|consensus

Probab=100.00  E-value=1.3e-31  Score=232.85  Aligned_cols=276  Identities=20%  Similarity=0.359  Sum_probs=229.4

Q ss_pred             CCCCceEEEEEccCCC-EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        157 QRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                      ...+.|.+++|+|... -+|+.+ .-.+.||+..+...  ...+......++++.|..||++|++|...|.|+|+|+.+.
T Consensus        24 ke~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~--~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r  100 (487)
T KOG0310|consen   24 KEHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSV--RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSR  100 (487)
T ss_pred             cccCcceeEecCCCCCCceEEec-ccEEEEEecchhhh--hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccH
Confidence            4568899999999544 344443 46799999876443  4445666777999999999999999999999999998888


Q ss_pred             eEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-
Q psy17188        236 TLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-  313 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  313 (504)
                      ..++.+.+|+.+|..+.|+|+ +..+++|+.|+.+++||+.+..+               ......|.+.|++.+|+|. 
T Consensus       101 ~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v---------------~~~l~~htDYVR~g~~~~~~  165 (487)
T KOG0310|consen  101 VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV---------------QAELSGHTDYVRCGDISPAN  165 (487)
T ss_pred             HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE---------------EEEecCCcceeEeeccccCC
Confidence            888999999999999999994 56788899999999999999875               4556789999999999995 


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccccc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ  393 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~  393 (504)
                      +..+++|+.||.|++||++... ....                                                  ...
T Consensus       166 ~hivvtGsYDg~vrl~DtR~~~-~~v~--------------------------------------------------eln  194 (487)
T KOG0310|consen  166 DHIVVTGSYDGKVRLWDTRSLT-SRVV--------------------------------------------------ELN  194 (487)
T ss_pred             CeEEEecCCCceEEEEEeccCC-ceeE--------------------------------------------------Eec
Confidence            4578899999999999988652 1000                                                  114


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      |+.+|..+.+-|.|..+++++. ..+++||+.++..... ....|...|+|+.+..++..|++++-|+.+++||+.+.+.
T Consensus       195 hg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~-~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kv  272 (487)
T KOG0310|consen  195 HGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLT-SMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKV  272 (487)
T ss_pred             CCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehh-hhhcccceEEEEEeecCCceEeecccccceEEEEccceEE
Confidence            6777889999999999998864 5699999997764433 3444888999999999999999999999999999999999


Q ss_pred             EEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        474 VRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       474 ~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +..+. ..++|.+++.+||++.++.|..||.
T Consensus       273 v~s~~-~~~pvLsiavs~dd~t~viGmsnGl  302 (487)
T KOG0310|consen  273 VHSWK-YPGPVLSIAVSPDDQTVVIGMSNGL  302 (487)
T ss_pred             EEeee-cccceeeEEecCCCceEEEecccce
Confidence            98887 6789999999999999999999884

>KOG0973|consensus

Probab=100.00  E-value=2e-31  Score=253.62  Aligned_cols=300  Identities=16%  Similarity=0.300  Sum_probs=237.3

Q ss_pred             CCCcEEEEEEcCCCcEEEEec---CCeEEEEeCCCCC-------CCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG---KGCVKVWDISQPG-------SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  181 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  181 (504)
                      ++..|.+++.+|++..+++|+   |+.++||+.+.-.       ...+........|.+.|+|+.|+|||++||+|++|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            456799999999999999998   8899999975421       101112223347999999999999999999999999


Q ss_pred             cEEEEeCCC----------------CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC
Q psy17188        182 NLSIWDLAS----------------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT  245 (504)
Q Consensus       182 ~i~iw~~~~----------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~  245 (504)
                      .|.||+...                .+.+....+.+|...|..++|+|++.+|++++.|++|.|||..+.+.+..+++|.
T Consensus        92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~  171 (942)
T KOG0973|consen   92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQ  171 (942)
T ss_pred             eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeeccc
Confidence            999999872                0123456788999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---
Q psy17188        246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---  322 (504)
Q Consensus       246 ~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---  322 (504)
                      +.|..+.|.|-|++|++-+.|++|++|++.+-.+..- +.        ..+........+..+.|+|||.+|++...   
T Consensus       172 s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~-It--------~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~  242 (942)
T KOG0973|consen  172 SLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKS-IT--------KPFEESPLTTFFLRLSWSPDGHHLASPNAVNG  242 (942)
T ss_pred             ccccceEECCccCeeeeecCCceEEEEEcccceeeEe-ec--------cchhhCCCcceeeecccCCCcCeecchhhccC
Confidence            9999999999999999999999999999665322100 00        02222334556889999999999998632   


Q ss_pred             -CCcEEEEeCCCCCccceeeeccCCCceeeEEECCC--------C-------CCceeeeccCCCeEEEEecCCCCCCCcc
Q psy17188        323 -ASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--------S-------KSPFFSSHHYKSCVKVWDISQPGSKTPV  386 (504)
Q Consensus       323 -dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~-------~~~~~~~~~~~~~i~i~d~~~~~~~~~~  386 (504)
                       -..+.|.+-.  .+.....+-+|..++.++.|+|.        |       .+..+++|+.|++|.||...........
T Consensus       243 ~~~~~~IieR~--tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi  320 (942)
T KOG0973|consen  243 GKSTIAIIERG--TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVI  320 (942)
T ss_pred             CcceeEEEecC--CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhh
Confidence             2357777653  44667788899999999999873        1       1127899999999999998654433333


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      ..+    ....|.+++|+|||..|++++.||+|.++.++.
T Consensus       321 ~~l----f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee  356 (942)
T KOG0973|consen  321 HNL----FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE  356 (942)
T ss_pred             hhh----hcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence            222    356799999999999999999999999998864

>KOG0647|consensus

Probab=100.00  E-value=2.8e-31  Score=216.94  Aligned_cols=273  Identities=21%  Similarity=0.380  Sum_probs=220.5

Q ss_pred             cCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCC-CeEE-EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        201 SSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN-QTLV-RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       201 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      ..++.|.+++||| ...++++++.|++|++|+++. +..+ +....|.++|.+++|+.||..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            4567799999999 555777999999999999987 3333 334569999999999999999999999999999999999


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      +                ......|..+|..+.|-+...  .|++|+.|.+|+.||.+...+.....++.   .+.++..-
T Consensus       105 Q----------------~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe---RvYa~Dv~  165 (347)
T KOG0647|consen  105 Q----------------VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE---RVYAADVL  165 (347)
T ss_pred             C----------------eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc---eeeehhcc
Confidence            8                455568899999999988665  89999999999999999876666555554   44444433


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                          ..+++.+..++.|.+|+++.+..+......   ...-.+++++..+|....+.|+-+|.+.|..++.+.+...+.+
T Consensus       166 ----~pm~vVata~r~i~vynL~n~~te~k~~~S---pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtF  238 (347)
T KOG0647|consen  166 ----YPMAVVATAERHIAVYNLENPPTEFKRIES---PLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTF  238 (347)
T ss_pred             ----CceeEEEecCCcEEEEEcCCCcchhhhhcC---cccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeE
Confidence                337888888999999999765432222111   2345688999999998889999999999999987644333333


Q ss_pred             cCC---------CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        436 TSS---------APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       436 ~~~---------~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      +.|         ..+|++++|+|.-..|++++.||++.+||-+....+.+.+.|..+|++..|+.+|.+++-+
T Consensus       239 kCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  239 KCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             EEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence            333         3468889999999999999999999999998888888888999999999999999998765

>KOG1539|consensus

Probab=100.00  E-value=4.4e-29  Score=230.49  Aligned_cols=373  Identities=17%  Similarity=0.295  Sum_probs=281.6

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCC-CceEEEEEcc--CCCEEEEecCCCcEEEE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKLLP--DGRTLIVGGEASNLSIW  186 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~--~~~~l~~~~~dg~i~iw  186 (504)
                      .|...|.-+.  +=|..+.++. ++.+.||+.........+. ....... ..|+++. +|  -=+.++.|+.+|.+.||
T Consensus       112 ~~~a~v~~l~--~fGe~lia~d~~~~l~vw~~s~~~~e~~l~-~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~lql~  187 (910)
T KOG1539|consen  112 LHGAKVHLLL--PFGEHLIAVDISNILFVWKTSSIQEELYLQ-STFLKVEGDFITALL-HPSTYLNKIVVGSSQGRLQLW  187 (910)
T ss_pred             cccceEEEEe--eecceEEEEEccCcEEEEEecccccccccc-ceeeeccCCceeeEe-cchhheeeEEEeecCCcEEEE
Confidence            6776776655  3366777777 9999999988742111111 1222222 2277774 44  24578899999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcC
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGL  265 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~  265 (504)
                      ++++++  ...++.++...|+++.=+|--..++.|..+|+|.+++++.++.+.+|+...+.|++++|..||+ .+++++.
T Consensus       188 Nvrt~K--~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~  265 (910)
T KOG1539|consen  188 NVRTGK--VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRS  265 (910)
T ss_pred             EeccCc--EEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccC
Confidence            999776  4788889999999999999888999999999999999999999999994459999999999987 5667777


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCCccceeeec
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA--SPTPRIKAELT  343 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~~~~  343 (504)
                      .|.+.+||++..+..              ......|.+.+....|.|....+++++.|..+++|-..  .+.+.......
T Consensus       266 ~G~m~~wDLe~kkl~--------------~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~  331 (910)
T KOG1539|consen  266 NGDMAFWDLEKKKLI--------------NVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRG  331 (910)
T ss_pred             CceEEEEEcCCCeee--------------eeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeecc
Confidence            799999999987643              23334567889999999999999999999998887554  34445566667


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecC---------------------------------------------
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS---------------------------------------------  378 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~---------------------------------------------  378 (504)
                      +|..+..++.+...... .+.+.+.|++++.+++.                                             
T Consensus       332 GHs~Pp~~irfy~~~g~-~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~  410 (910)
T KOG1539|consen  332 GHSAPPSCIRFYGSQGH-FILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKE  410 (910)
T ss_pred             CCCCCchheeeeccCcE-EEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhh
Confidence            78888888887743332 56666666666655532                                             


Q ss_pred             --------------------CCCC-CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee-ccc
Q psy17188        379 --------------------QPGS-KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELT  436 (504)
Q Consensus       379 --------------------~~~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~  436 (504)
                                          .... ...+...........+++++.++.|++.+.|...|.|.+|+++++-....+ ...
T Consensus       411 W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~  490 (910)
T KOG1539|consen  411 WDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSP  490 (910)
T ss_pred             hcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCc
Confidence                                1111 000001111112356889999999999999999999999999988544333 236


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce-----------------------------------------EE
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-----------------------------------------VR  475 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~-----------------------------------------~~  475 (504)
                      .|..+|+.++...-++.+++++.+|-+++||..+..+                                         ++
T Consensus       491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR  570 (910)
T KOG1539|consen  491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVR  570 (910)
T ss_pred             cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhH
Confidence            7899999999999999999999999999999866542                                         22


Q ss_pred             EEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        476 QFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       476 ~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      .+.+|.+.|++++|||||++|++++.|+|
T Consensus       571 ~f~gh~nritd~~FS~DgrWlisasmD~t  599 (910)
T KOG1539|consen  571 EFWGHGNRITDMTFSPDGRWLISASMDST  599 (910)
T ss_pred             HhhccccceeeeEeCCCCcEEEEeecCCc
Confidence            34589999999999999999999999986

>KOG0647|consensus

Probab=100.00  E-value=8.2e-31  Score=214.18  Aligned_cols=278  Identities=18%  Similarity=0.264  Sum_probs=218.5

Q ss_pred             CCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        157 QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       157 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                      ..++.|.+++||| ...++++++.|++|++|+++............|.++|.+++|+.||..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            4577899999999 566677899999999999987432233556789999999999999999999999999999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCC--EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGT--KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      + +.++..|.++|..+.|-+...  .|+|||.|++|+.||++...                .+........+.++..-  
T Consensus       105 Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~----------------pv~t~~LPeRvYa~Dv~--  165 (347)
T KOG0647|consen  105 Q-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN----------------PVATLQLPERVYAADVL--  165 (347)
T ss_pred             C-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC----------------eeeeeeccceeeehhcc--
Confidence            5 456667999999999988655  89999999999999999765                33333444555555443  


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccccc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ  393 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~  393 (504)
                      ...++++..+..|.+|+++.+..............+++++..+|.+  .++.|+-+|.+.+..+..+.. ..-..++++.
T Consensus       166 ~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~--~~alGsiEGrv~iq~id~~~~-~~nFtFkCHR  242 (347)
T KOG0647|consen  166 YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKD--GFALGSIEGRVAIQYIDDPNP-KDNFTFKCHR  242 (347)
T ss_pred             CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCC--ceEeeeecceEEEEecCCCCc-cCceeEEEec
Confidence            4578888999999999998765444444444556889999999988  568899999999999987643 2222333333


Q ss_pred             C-------CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        394 R-------DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       394 ~-------~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      .       -..|++++|+|....|++++.||++.+||-+....  +.....+..+|++..|+.+|.++|.+.
T Consensus       243 ~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~k--Lk~s~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  243 STNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTK--LKTSETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             cCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhh--hhccCcCCCccceeEecCCCCEEEEEe
Confidence            1       23588999999999999999999999999875433  334466788999999999999998663

>KOG0641|consensus

Probab=100.00  E-value=2.7e-29  Score=196.93  Aligned_cols=309  Identities=17%  Similarity=0.248  Sum_probs=242.3

Q ss_pred             ccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCC------CCC----CCCceeeeeecCCCCceEEEEEccC
Q psy17188        102 RHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDIS------QPG----SKTPVSQLDCLQRDNYIRSVKLLPD  170 (504)
Q Consensus       102 ~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~------~~~----~~~~~~~~~~~~~~~~v~~~~~s~~  170 (504)
                      ++.+.+..+..+..|.+++|.|.|.+.+.|+ ..+++|-...      .+.    ....+.......|.+.|.|.+|+|+
T Consensus        21 ~~f~~i~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~  100 (350)
T KOG0641|consen   21 KHFEAINILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC  100 (350)
T ss_pred             cceEEEEEecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence            3456677788899999999999999999999 6777775432      111    1111222234468999999999999


Q ss_pred             CCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCC----CCEEEEEe-CCCcEEEEECCCCeEEEeec
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPD----SKVCFSCC-SDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~  242 (504)
                      |++|++|+.|.+|++..++.....   ...++.-|.+.|..++|-.+    +.+|++++ .|..|++-|..+|+..+.+.
T Consensus       101 geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s  180 (350)
T KOG0641|consen  101 GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS  180 (350)
T ss_pred             cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec
Confidence            999999999999999877654332   34567889999999999653    45777665 47788888999999999999


Q ss_pred             CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        243 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      +|.+.|.++ ++-++-++++|+.|.+|++||++-..+.- .+..         ..........|.+++..|.|++|++|-
T Consensus       181 ghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~---------~~~~glessavaav~vdpsgrll~sg~  250 (350)
T KOG0641|consen  181 GHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDND---------FHDGGLESSAVAAVAVDPSGRLLASGH  250 (350)
T ss_pred             CCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCc---------ccCCCcccceeEEEEECCCcceeeecc
Confidence            999999887 34458899999999999999998654311 0000         000011235689999999999999999


Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      .|....+||++.+  .....+..|...|.++.|+|...  ++++++.|..|++-|++.. ....+.......|...+..+
T Consensus       251 ~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~--yllt~syd~~ikltdlqgd-la~el~~~vv~ehkdk~i~~  325 (350)
T KOG0641|consen  251 ADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAH--YLLTCSYDMKIKLTDLQGD-LAHELPIMVVAEHKDKAIQC  325 (350)
T ss_pred             CCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCce--EEEEecccceEEEeecccc-hhhcCceEEEEeccCceEEE
Confidence            9999999999987  66778888999999999999887  8999999999999999753 33334444555688888899


Q ss_pred             EEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        402 KLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      .|+|..--+++.+.|.++.+|-+.
T Consensus       326 rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  326 RWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EecCccceeeeccCcceEEEeccC
Confidence            999999889999999999999764

>KOG0973|consensus

Probab=100.00  E-value=8.1e-31  Score=249.51  Aligned_cols=286  Identities=19%  Similarity=0.327  Sum_probs=230.1

Q ss_pred             CCCCceEEEEEccCCCEEEEec--CCCcEEEEeCCCC----------CccceeeeecCcCceEEEEECCCCCEEEEEeCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASP----------TPRIKAELTSSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                      .++..|.++..+||+..+++|+  .|+.++||+.+.-          -+........|.+.|.|+.|+|||++||+|++|
T Consensus        11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD   90 (942)
T KOG0973|consen   11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD   90 (942)
T ss_pred             cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence            3456699999999999999999  8999999987531          133456677899999999999999999999999


Q ss_pred             CcEEEEECCC------------------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        225 GNIAVWDLHN------------------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       225 g~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      +.|.||+...                  .+.+..+.+|.+.|..++|+|++.+|++++.|++|.+|+..+.+.       
T Consensus        91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~-------  163 (942)
T KOG0973|consen   91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFEL-------  163 (942)
T ss_pred             ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccccee-------
Confidence            9999999772                  146788899999999999999999999999999999999998753       


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                              ......|...|..+.|+|-|++|++-+.|++|++|++.+..  ....+..+                     
T Consensus       164 --------~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~--i~k~It~p---------------------  212 (942)
T KOG0973|consen  164 --------LKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG--IEKSITKP---------------------  212 (942)
T ss_pred             --------eeeeecccccccceEECCccCeeeeecCCceEEEEEcccce--eeEeeccc---------------------
Confidence                    44556889999999999999999999999999999965431  11111110                     


Q ss_pred             cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----CCcEEEeeCCCCCcceeecccCCCCce
Q psy17188        367 HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPAC  442 (504)
Q Consensus       367 ~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v  442 (504)
                                            +........+..+.|||||++|++...    -..+.|.+-.+.  .....+-+|..++
T Consensus       213 ----------------------f~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tW--k~~~~LvGH~~p~  268 (942)
T KOG0973|consen  213 ----------------------FEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTW--KVDKDLVGHSAPV  268 (942)
T ss_pred             ----------------------hhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCc--eeeeeeecCCCce
Confidence                                  000122344668999999999998643    234888877544  4456678899999


Q ss_pred             eEEEECCC-----CC------------EEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCCCEEEEecCCCC
Q psy17188        443 YALAISPD-----SK------------VCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       443 ~~l~~s~~-----~~------------~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      .++.|+|.     .+            .+|+|+.|++|-||.....+++..+.. ....|.+++|+|||..|+.+|.|||
T Consensus       269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGt  348 (942)
T KOG0973|consen  269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGT  348 (942)
T ss_pred             EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCe
Confidence            99999981     11            678999999999999988887765543 3568999999999999999999996

>KOG0305|consensus

Probab=100.00  E-value=1.2e-30  Score=235.94  Aligned_cols=277  Identities=22%  Similarity=0.350  Sum_probs=229.1

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  197 (504)
                      -+.|+ ....|+.+....|++|+..++.    +..+...+ ...|+++.|+++|.+|++|..+|.|.|||..+.+.  ..
T Consensus       182 lldWs-s~n~laValg~~vylW~~~s~~----v~~l~~~~-~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~--~~  253 (484)
T KOG0305|consen  182 LLDWS-SANVLAVALGQSVYLWSASSGS----VTELCSFG-EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK--TR  253 (484)
T ss_pred             Hhhcc-cCCeEEEEecceEEEEecCCCc----eEEeEecC-CCceEEEEECCCCCEEEEeecCCeEEEEehhhccc--cc
Confidence            34566 4568888888899999988753    22222222 88999999999999999999999999999986543  55


Q ss_pred             eeec-CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        198 ELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       198 ~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      .+.+ |...|-+++|+  +..+.+|+.|+.|..+|++..+.... +.+|...|..+.|++|++++++|+.|+.+.|||..
T Consensus       254 ~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~  331 (484)
T KOG0305|consen  254 TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL  331 (484)
T ss_pred             cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC
Confidence            5666 99999999997  56899999999999999998766555 88999999999999999999999999999999995


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEE--eCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVG--GEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~--~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      ..+.               .+....|...|.+++|+| ....||+|  +.|+.|++||..++...   ........|..+
T Consensus       332 ~~~p---------------~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i---~~vdtgsQVcsL  393 (484)
T KOG0305|consen  332 SPEP---------------KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARI---DSVDTGSQVCSL  393 (484)
T ss_pred             Cccc---------------cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEe---cccccCCceeeE
Confidence            5442               566778999999999999 66778886  56899999999976432   233345599999


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .|++..+.++...|..++.|.||+..+...     ......|...|..++++|||..+++|+.|.++++|++-..
T Consensus       394 ~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~-----~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  394 IWSKKYKELLSTHGYSENQITLWKYPSMKL-----VAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEcCCCCEEEEecCCCCCcEEEEeccccce-----eeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            999999987777788889999999976322     2334578999999999999999999999999999998754

>KOG0299|consensus

Probab=100.00  E-value=1.7e-30  Score=224.14  Aligned_cols=285  Identities=23%  Similarity=0.426  Sum_probs=234.6

Q ss_pred             eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCce-----------eeeee--cCCCCceEEEEEccCC
Q psy17188        107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPV-----------SQLDC--LQRDNYIRSVKLLPDG  171 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~-----------~~~~~--~~~~~~v~~~~~s~~~  171 (504)
                      +..+ .|.-.|++++++|+++++.+++ +++|.=|++.++.....+           ..+..  ..|...+.+++.++||
T Consensus       135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg  214 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG  214 (479)
T ss_pred             ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence            3444 7999999999999999999999 999999999887533111           01111  2688899999999999


Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEE
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI  251 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~  251 (504)
                      +|||+|+.|..|.||+.++.+.  ...+++|.+.|.+++|-.....|++++.|+.|++|+++....+.++.+|...|.+|
T Consensus       215 kylatgg~d~~v~Iw~~~t~eh--v~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I  292 (479)
T KOG0299|consen  215 KYLATGGRDRHVQIWDCDTLEH--VKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGI  292 (479)
T ss_pred             cEEEecCCCceEEEecCcccch--hhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence            9999999999999999997764  56689999999999999888899999999999999999999999999999999999


Q ss_pred             EEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        252 DISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       252 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      ....-++.+-+|+.|+++++|++....                .+....+.+.+.|++|-.+ ..+++|+.+|.|.+|++
T Consensus       293 daL~reR~vtVGgrDrT~rlwKi~ees----------------qlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~  355 (479)
T KOG0299|consen  293 DALSRERCVTVGGRDRTVRLWKIPEES----------------QLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSL  355 (479)
T ss_pred             chhcccceEEeccccceeEEEeccccc----------------eeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeee
Confidence            998878777777799999999996554                4555667788999999865 56999999999999999


Q ss_pred             CCCCccceeeecc----------CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        332 ASPTPRIKAELTS----------SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       332 ~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      .+.++........          +...|++++..|...  ++++|+.+|+|++|.+..+-.  .+..+....-.+.|+++
T Consensus       356 ~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sd--L~asGS~~G~vrLW~i~~g~r--~i~~l~~ls~~GfVNsl  431 (479)
T KOG0299|consen  356 LKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSD--LLASGSWSGCVRLWKIEDGLR--AINLLYSLSLVGFVNSL  431 (479)
T ss_pred             cccCceeEeeccccccCCccccccccceeeeEecccCc--eEEecCCCCceEEEEecCCcc--ccceeeecccccEEEEE
Confidence            8876655443322          123788999999988  999999999999999987632  23333334467889999


Q ss_pred             EEcCCCCEEEEee
Q psy17188        402 KLLPDGRTLIVGG  414 (504)
Q Consensus       402 ~~s~~g~~l~~~~  414 (504)
                      +|+++|+++++|.
T Consensus       432 ~f~~sgk~ivagi  444 (479)
T KOG0299|consen  432 AFSNSGKRIVAGI  444 (479)
T ss_pred             EEccCCCEEEEec
Confidence            9999999777763

>KOG0283|consensus

Probab=100.00  E-value=2.8e-31  Score=246.30  Aligned_cols=289  Identities=18%  Similarity=0.256  Sum_probs=210.4

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC---------cCceEEEEECC---CCC--EEEEEe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS---------APACYALAISP---DSK--VCFSCC  222 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---------~~~v~~~~~s~---~~~--~l~~~~  222 (504)
                      .|.+.|.++.||+||+|||+|+.|+.|+||.+...+.. .......         ...+..+.-++   .++  ..-.+.
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~-~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERM-RVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchh-cccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            69999999999999999999999999999998753211 0000000         00011111111   001  111222


Q ss_pred             CCCcEEEEECC----CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        223 SDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       223 ~dg~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      .... .+.+..    ..++++.+.||.+.|..+.|+.++ +|++++.|.+|++|++...+                .+..
T Consensus       344 ~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~----------------CL~~  405 (712)
T KOG0283|consen  344 QSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKE----------------CLKV  405 (712)
T ss_pred             CCcc-ccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcc----------------eeeE
Confidence            2222 222222    246788899999999999999765 99999999999999999877                6778


Q ss_pred             cccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        299 LQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       299 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..|.+.|+|++|+| |.+++++|+-|+.++||++...+...   ...-..-|+++++.|||+  ..+.|+.+|..++|+.
T Consensus       406 F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~---W~Dl~~lITAvcy~PdGk--~avIGt~~G~C~fY~t  480 (712)
T KOG0283|consen  406 FSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVD---WNDLRDLITAVCYSPDGK--GAVIGTFNGYCRFYDT  480 (712)
T ss_pred             EecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEe---ehhhhhhheeEEeccCCc--eEEEEEeccEEEEEEc
Confidence            89999999999999 88999999999999999998764332   223335899999999999  8999999999999998


Q ss_pred             CCCCCCCcccc----cccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        378 SQPGSKTPVSQ----LDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       378 ~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                      ...........    -+...+. .|+.+.|.|.. ..|++.+.|..|+|||.++...+.++........-....|+.||+
T Consensus       481 ~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk  559 (712)
T KOG0283|consen  481 EGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGK  559 (712)
T ss_pred             cCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCC
Confidence            76432211111    1111233 79999999743 357777899999999998777666665444444445668999999


Q ss_pred             EEEEeeCCCcEEEEEcCC
Q psy17188        453 VCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       453 ~l~s~~~dg~i~iwd~~~  470 (504)
                      +|+++++|..|+||+...
T Consensus       560 ~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  560 HIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             EEEEeecCceEEEEeCCC
Confidence            999999999999999744

>KOG0310|consensus

Probab=99.98  E-value=2.4e-30  Score=224.94  Aligned_cols=282  Identities=23%  Similarity=0.335  Sum_probs=231.0

Q ss_pred             CCCcEEEEEEcCCC-cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPT-KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~-~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      -.+.|++++|+|.. .-+|+.+.-.+.||+..+....+.+.     ..+..+.++.|-.||++||+|+..|.|+|+|..+
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~s-----rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~   99 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFS-----RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS   99 (487)
T ss_pred             ccCcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHH-----hhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence            34789999999943 33555556789999987754433333     3467899999999999999999999999999553


Q ss_pred             CCccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCe
Q psy17188        191 PTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNT  268 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~  268 (504)
                        ......+..|..++..+.|+|. +..|++|+.|+.+++||+.+......+.+|+..|.|.+|+|. +..++||++||+
T Consensus       100 --r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~  177 (487)
T KOG0310|consen  100 --RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK  177 (487)
T ss_pred             --HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence              3356678899999999999995 457888889999999999999987789999999999999994 558999999999


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |++||++....               ......|..+|..+.+-|.|..+++++. ..+++||+.++... ......|...
T Consensus       178 vrl~DtR~~~~---------------~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~ql-l~~~~~H~Kt  240 (487)
T KOG0310|consen  178 VRLWDTRSLTS---------------RVVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQL-LTSMFNHNKT  240 (487)
T ss_pred             EEEEEeccCCc---------------eeEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCcee-hhhhhcccce
Confidence            99999997632               4455678999999999999999998865 57999999976533 3344448889


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      |+|+.+..++.  .+++++-|+.+++||+.+-      +......-.++|.+++.+|+++.++.|..+|.+.+-+..
T Consensus       241 VTcL~l~s~~~--rLlS~sLD~~VKVfd~t~~------Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  241 VTCLRLASDST--RLLSGSLDRHVKVFDTTNY------KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE  309 (487)
T ss_pred             EEEEEeecCCc--eEeecccccceEEEEccce------EEEEeeecccceeeEEecCCCceEEEecccceeeeehhh
Confidence            99999999887  7999999999999996542      333344567889999999999999999999988776443

>KOG1407|consensus

Probab=99.98  E-value=9.6e-30  Score=203.71  Aligned_cols=277  Identities=14%  Similarity=0.158  Sum_probs=230.8

Q ss_pred             eecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEE
Q psy17188        109 TLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIW  186 (504)
Q Consensus       109 ~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw  186 (504)
                      ..+|...|.+|+|+-+|..|++|+ |+++.+|+++..   .........+|.+.|-.++|.| ....+++++.|.+|++|
T Consensus        16 ~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~---r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w   92 (313)
T KOG1407|consen   16 LQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD---RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW   92 (313)
T ss_pred             hhhhhhcceEEEEcccCceeeecccCCceEEEEecch---hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence            348999999999999999999999 999999999875   3344455568999999999998 67789999999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      |...+++.......+  +. .-+.|+|+|.++++++.|..|.+.|.++.+.+...+ ....+..++|+-++.+++.....
T Consensus        93 d~r~~k~~~~i~~~~--en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~Gl  168 (313)
T KOG1407|consen   93 DIRSGKCTARIETKG--EN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGL  168 (313)
T ss_pred             EeccCcEEEEeeccC--cc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCC
Confidence            999887644443333  33 357899999999999999999999999988877766 56678889999878777777777


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |.|.|.....-+.               ......|.....++.|+|+|+++++|+.|..+.+||++..  .....+..+.
T Consensus       169 G~v~ILsypsLkp---------------v~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRld  231 (313)
T KOG1407|consen  169 GCVEILSYPSLKP---------------VQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLD  231 (313)
T ss_pred             ceEEEEecccccc---------------ccccccCCcceEEEEECCCCceEeeccccceeeccChhHh--hhheeecccc
Confidence            8998888765432               4445677888999999999999999999999999999865  5666777888


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      -+|..+.|+-|++  ++++++.|..|-|-+++++.....+      ++.++...++|+|...+||.++.|.
T Consensus       232 wpVRTlSFS~dg~--~lASaSEDh~IDIA~vetGd~~~eI------~~~~~t~tVAWHPk~~LLAyA~ddk  294 (313)
T KOG1407|consen  232 WPVRTLSFSHDGR--MLASASEDHFIDIAEVETGDRVWEI------PCEGPTFTVAWHPKRPLLAYACDDK  294 (313)
T ss_pred             CceEEEEeccCcc--eeeccCccceEEeEecccCCeEEEe------eccCCceeEEecCCCceeeEEecCC
Confidence            8999999999999  8999999999999999887544333      4577888999999999999887653

>KOG0305|consensus

Probab=99.98  E-value=5.9e-30  Score=231.41  Aligned_cols=281  Identities=21%  Similarity=0.374  Sum_probs=234.6

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~  239 (504)
                      -..+-+.|+ ..+.||+|. ...|++|+..++.......+  +...|+++.|+++|.+|++|..+|.|.|||..+.+.+.
T Consensus       178 fY~nlldWs-s~n~laVal-g~~vylW~~~s~~v~~l~~~--~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~  253 (484)
T KOG0305|consen  178 FYLNLLDWS-SANVLAVAL-GQSVYLWSASSGSVTELCSF--GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTR  253 (484)
T ss_pred             HhhhHhhcc-cCCeEEEEe-cceEEEEecCCCceEEeEec--CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccc
Confidence            345566788 455677764 46899999988764333333  37889999999999999999999999999999999999


Q ss_pred             eecC-CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188        240 QFQG-HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  318 (504)
Q Consensus       240 ~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  318 (504)
                      .+.+ |...|.+++|.  +..+.+|+.|+.|..+|++..+...             . ....|...|..+.|++|+++++
T Consensus       254 ~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~-------------~-~~~~H~qeVCgLkws~d~~~lA  317 (484)
T KOG0305|consen  254 TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV-------------S-TLQGHRQEVCGLKWSPDGNQLA  317 (484)
T ss_pred             cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh-------------h-hhhcccceeeeeEECCCCCeec
Confidence            9999 99999999998  6689999999999999999876311             1 2567899999999999999999


Q ss_pred             EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec--cCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH--HYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +|+.|+.+.|||....  .....+..|...|..++|+|-... ++++|  +.|++|++||..++.....      .....
T Consensus       318 SGgnDN~~~Iwd~~~~--~p~~~~~~H~aAVKA~awcP~q~~-lLAsGGGs~D~~i~fwn~~~g~~i~~------vdtgs  388 (484)
T KOG0305|consen  318 SGGNDNVVFIWDGLSP--EPKFTFTEHTAAVKALAWCPWQSG-LLATGGGSADRCIKFWNTNTGARIDS------VDTGS  388 (484)
T ss_pred             cCCCccceEeccCCCc--cccEEEeccceeeeEeeeCCCccC-ceEEcCCCcccEEEEEEcCCCcEecc------cccCC
Confidence            9999999999999544  677788899999999999998877 55554  4699999999987644333      34578


Q ss_pred             ceEEEEEcCCCCEEEEe--eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        397 YIRSVKLLPDGRTLIVG--GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      .|..+.|++..+-|+++  ..++.|.||+..+.  .....+.+|...|..++++|||..+++|+.|.++++|++-+.
T Consensus       389 QVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~--~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  389 QVCSLIWSKKYKELLSTHGYSENQITLWKYPSM--KLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             ceeeEEEcCCCCEEEEecCCCCCcEEEEecccc--ceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            89999999998777764  45678999999864  456678899999999999999999999999999999998764

>KOG0288|consensus

Probab=99.98  E-value=1.4e-31  Score=227.55  Aligned_cols=281  Identities=17%  Similarity=0.300  Sum_probs=232.3

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ...+..|.+.+..+.|-++...|++|+.|..|++|+....+  .+.++.+..+.|+++.|.++++++++++.|+.+++|+
T Consensus       168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wn  247 (459)
T KOG0288|consen  168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWN  247 (459)
T ss_pred             hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeee
Confidence            45567889999999999998899999999999999988766  7788888999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      +...+.               .....+|.+.|+++.|......+++|+.|.+|+.||+..........   ....+..+.
T Consensus       248 vd~~r~---------------~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l---~~S~cnDI~  309 (459)
T KOG0288|consen  248 VDSLRL---------------RHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL---PGSQCNDIV  309 (459)
T ss_pred             ccchhh---------------hhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc---ccccccceE
Confidence            998875               34455799999999999877779999999999999998753322221   222455555


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      .++.    .++++..|+.|++||.+.......+      ...+.|+++..+++|..|.+.+.|.++.+.|+++.+....+
T Consensus       310 ~~~~----~~~SgH~DkkvRfwD~Rs~~~~~sv------~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~  379 (459)
T KOG0288|consen  310 CSIS----DVISGHFDKKVRFWDIRSADKTRSV------PLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTF  379 (459)
T ss_pred             ecce----eeeecccccceEEEeccCCceeeEe------ecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEe
Confidence            5522    6899999999999999876443333      33568999999999999999999999999999987655544


Q ss_pred             cccC--CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC--ceEEEEEccCCCEEEEecCCCC
Q psy17188        434 ELTS--SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD--GASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       434 ~~~~--~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ...+  .....+.+.|||++.|+++|+.||.|+||++.++++...+.....  .|++++|+|.|..|++++.++.
T Consensus       380 sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~  454 (459)
T KOG0288|consen  380 SAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKA  454 (459)
T ss_pred             eccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcc
Confidence            3322  122378889999999999999999999999999999988886544  4999999999999999998763

>PTZ00421 coronin; Provisional

Probab=99.98  E-value=4.4e-29  Score=234.78  Aligned_cols=267  Identities=18%  Similarity=0.237  Sum_probs=193.4

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-----------cceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEE
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-----------RIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIA  228 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~  228 (504)
                      .|.....++|+..+++++.+.....|+...+..           .....+.+|.+.|.+++|+| ++++|++++.|++|+
T Consensus        22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk  101 (493)
T PTZ00421         22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM  101 (493)
T ss_pred             ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence            344555566655566666666566665433211           11234678999999999999 888999999999999


Q ss_pred             EEECCCC-------eEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        229 VWDLHNQ-------TLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       229 iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      +||+.++       +.+..+.+|...|.+++|+|++ ++|++++.|++|++||+++++.               ......
T Consensus       102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~---------------~~~l~~  166 (493)
T PTZ00421        102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA---------------VEVIKC  166 (493)
T ss_pred             EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE---------------EEEEcC
Confidence            9999765       3567789999999999999975 6999999999999999998763               223345


Q ss_pred             cCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      |...|.+++|+|++++|++++.|+.|++||+++++.  ...+..|..                                 
T Consensus       167 h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~--v~tl~~H~~---------------------------------  211 (493)
T PTZ00421        167 HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTI--VSSVEAHAS---------------------------------  211 (493)
T ss_pred             CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcE--EEEEecCCC---------------------------------
Confidence            778899999999999999999999999999987632  222222211                                 


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEee----CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEE
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS  456 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s  456 (504)
                                     .....+.|.+++..+++++    .|+.|++||+++...............+....|++++++|++
T Consensus       212 ---------------~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~l  276 (493)
T PTZ00421        212 ---------------AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYI  276 (493)
T ss_pred             ---------------CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEE
Confidence                           0112455666666666543    478899999886543322222223344566789999999998


Q ss_pred             ee-CCCcEEEEEcCCcceEEEEee-cCCceEEEEEccC
Q psy17188        457 CC-SDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISAD  492 (504)
Q Consensus       457 ~~-~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d  492 (504)
                      ++ .|+.|++||+.+++++..... +..++..++|.|.
T Consensus       277 ggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        277 GSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             EEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence            87 499999999999988766543 4456778888774

>KOG0289|consensus

Probab=99.98  E-value=1.3e-29  Score=217.12  Aligned_cols=286  Identities=18%  Similarity=0.261  Sum_probs=246.4

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~  239 (504)
                      ..+.++...|....+++|+.|..+.++|...++  ....+++|...|+.+.|+|+...+++++.|..|+||.........
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q--~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~  297 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQ--ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPT  297 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhh--hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcc
Confidence            458888888887899999999999999988655  477889999999999999999999999999999999999888888


Q ss_pred             eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE
Q psy17188        240 QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  319 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  319 (504)
                      ....|..+|+.+..+|.|.+|++++.|++..+.|++++....             .......+-.+++.+|+|||..+.+
T Consensus       298 ~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt-------------~vs~~~s~v~~ts~~fHpDgLifgt  364 (506)
T KOG0289|consen  298 SSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLT-------------VVSDETSDVEYTSAAFHPDGLIFGT  364 (506)
T ss_pred             ccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEE-------------EEeeccccceeEEeeEcCCceEEec
Confidence            888999999999999999999999999999999999997432             1111123455899999999999999


Q ss_pred             EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceE
Q psy17188        320 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR  399 (504)
Q Consensus       320 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~  399 (504)
                      |..|+.+++||+.+..  ....+++|.++|..++|+.+|-  +++++..|+.|++||++.....+.+..    .....+.
T Consensus       365 gt~d~~vkiwdlks~~--~~a~Fpght~~vk~i~FsENGY--~Lat~add~~V~lwDLRKl~n~kt~~l----~~~~~v~  436 (506)
T KOG0289|consen  365 GTPDGVVKIWDLKSQT--NVAKFPGHTGPVKAISFSENGY--WLATAADDGSVKLWDLRKLKNFKTIQL----DEKKEVN  436 (506)
T ss_pred             cCCCceEEEEEcCCcc--ccccCCCCCCceeEEEeccCce--EEEEEecCCeEEEEEehhhcccceeec----cccccce
Confidence            9999999999999874  6778888999999999999998  899999999999999997654333322    2233688


Q ss_pred             EEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       400 ~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      ++.|.+.|.+|+.++.+=.|++++-.+........+..|.+..+.+.|....+++++++.|..++++.+
T Consensus       437 s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  437 SLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            999999999999998888888888776666667777788888899999999999999999999888864

>KOG0299|consensus

Probab=99.97  E-value=1.2e-29  Score=218.98  Aligned_cols=289  Identities=17%  Similarity=0.324  Sum_probs=233.5

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc---ce-----------eee--ecCcCceEEEEECCCCCEEE
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR---IK-----------AEL--TSSAPACYALAISPDSKVCF  219 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~-----------~~~--~~~~~~v~~~~~s~~~~~l~  219 (504)
                      ..|.-++.+++++|++++.++++.+++|.-|++.+++..   ..           ...  ..|...+.+++.++|+++|+
T Consensus       139 ~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla  218 (479)
T KOG0299|consen  139 GKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA  218 (479)
T ss_pred             ccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence            368899999999999999999999999999998776522   00           011  37888899999999999999


Q ss_pred             EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      +|+.|..|.||+.++.+.++.+.+|.+.|.+++|-...+.|++++.|+.+++|+++....               .....
T Consensus       219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~---------------vetly  283 (479)
T KOG0299|consen  219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY---------------VETLY  283 (479)
T ss_pred             ecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH---------------HHHHh
Confidence            999999999999999999999999999999999998888999999999999999987653               45567


Q ss_pred             ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      +|++.|.++....-++.+-+|+.|.++++|++...   ....+.++.+.+.+++|-.+.   .|++|+.+|.|.+|++..
T Consensus       284 GHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ee---sqlifrg~~~sidcv~~In~~---HfvsGSdnG~IaLWs~~K  357 (479)
T KOG0299|consen  284 GHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEE---SQLIFRGGEGSIDCVAFINDE---HFVSGSDNGSIALWSLLK  357 (479)
T ss_pred             CCccceeeechhcccceEEeccccceeEEEecccc---ceeeeeCCCCCeeeEEEeccc---ceeeccCCceEEEeeecc
Confidence            89999999999988898888999999999999543   344455667789999998877   499999999999999876


Q ss_pred             CCCCCccccc-------ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC--cceeecccCCCCceeEEEECCC
Q psy17188        380 PGSKTPVSQL-------DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT--PRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       380 ~~~~~~~~~~-------~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      ..........       ....++.+|++++..|...++++|+.+|.|++|-+..+-  ......+. -.+.|++++|+++
T Consensus       358 Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~s  436 (479)
T KOG0299|consen  358 KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNS  436 (479)
T ss_pred             cCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccC
Confidence            5432222111       112233589999999999999999999999999998762  22222333 4567999999999


Q ss_pred             CCEEEEe-eCCCcEEEE
Q psy17188        451 SKVCFSC-CSDGNIAVW  466 (504)
Q Consensus       451 ~~~l~s~-~~dg~i~iw  466 (504)
                      |+.+++| +....+--|
T Consensus       437 gk~ivagiGkEhRlGRW  453 (479)
T KOG0299|consen  437 GKRIVAGIGKEHRLGRW  453 (479)
T ss_pred             CCEEEEeccccccccee
Confidence            9966655 444444344

>KOG0289|consensus

Probab=99.97  E-value=1.7e-29  Score=216.37  Aligned_cols=277  Identities=16%  Similarity=0.268  Sum_probs=238.0

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      ..+.++...+..+.+++|+.|..+.++|...++.+..++||...|+.+.++|+...+++++.|..|++|.......    
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~----  295 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE----  295 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC----
Confidence            4578888888777999999999999999999999999999999999999999999999999999999999876542    


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                                 ......|+.+|+.+..+|.|.||+.++.|++..+.|++++............-.+++.+|+|||-  +|
T Consensus       296 -----------~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgL--if  362 (506)
T KOG0289|consen  296 -----------PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGL--IF  362 (506)
T ss_pred             -----------ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCce--EE
Confidence                       44556788999999999999999999999999999999986555554444556789999999998  89


Q ss_pred             eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                      .+|..|+.++|||+..+...     ..+..|.++|..++|+.+|-+|+++++|+.|++||++..+....+.+.... .+.
T Consensus       363 gtgt~d~~vkiwdlks~~~~-----a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~-~v~  436 (506)
T KOG0289|consen  363 GTGTPDGVVKIWDLKSQTNV-----AKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK-EVN  436 (506)
T ss_pred             eccCCCceEEEEEcCCcccc-----ccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc-cce
Confidence            99999999999999876432     233468999999999999999999999999999999977655555555443 689


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcC--CcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        444 ALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       444 ~l~~s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ++.|.+.|++|+.++.|=.|++++-.  +..++..+..|.+..+.+.|....++++++|.|.
T Consensus       437 s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~  498 (506)
T KOG0289|consen  437 SLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDA  498 (506)
T ss_pred             eEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchh
Confidence            99999999999999887666666532  5667788888999999999999999999999885

>KOG0268|consensus

Probab=99.97  E-value=7e-31  Score=219.75  Aligned_cols=281  Identities=17%  Similarity=0.329  Sum_probs=228.1

Q ss_pred             cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      ||.+.|.|++=.|.. ..+++|+ ||.|+|||+.+.++...+.     .|.+.|..|++..  ..++++++|.+|+.|.+
T Consensus        64 gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~-----AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   64 GHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFK-----AHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             ccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheee-----cccCceeeEEecc--cceEEecCCcceeeeec
Confidence            899999999999977 7788888 9999999998755444443     7999999999986  66888889999999998


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCC
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDN  267 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg  267 (504)
                      +..   ....+.+ ...+..+.-+..+..++++++  .|.|||.....+++.+.-....|.++.|+|- ...|+++..|+
T Consensus       137 ~~~---p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDr  210 (433)
T KOG0268|consen  137 DGP---PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDR  210 (433)
T ss_pred             cCC---cceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCC
Confidence            753   2333322 334666776667778888876  4999999999999999988889999999994 45788888999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  347 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~  347 (504)
                      .|.+||++++.                .+......-.-+.++|+|.+-.++++++|..++.||++..+ .......+|..
T Consensus       211 sIvLyD~R~~~----------------Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvs  273 (433)
T KOG0268|consen  211 SIVLYDLRQAS----------------PLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVS  273 (433)
T ss_pred             ceEEEecccCC----------------ccceeeeeccccceecCccccceeeccccccceehhhhhhc-ccchhhcccce
Confidence            99999999987                33333334456789999988889999999999999998764 45566778888


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .+.++.|+|.|+  -|++++.|.+|+||..+.+........    ..-..|.++.||-|.+++++|++|+.|++|.....
T Consensus       274 AV~dVdfsptG~--EfvsgsyDksIRIf~~~~~~SRdiYht----kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As  347 (433)
T KOG0268|consen  274 AVMDVDFSPTGQ--EFVSGSYDKSIRIFPVNHGHSRDIYHT----KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS  347 (433)
T ss_pred             eEEEeccCCCcc--hhccccccceEEEeecCCCcchhhhhH----hhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence            999999999999  599999999999999987644332221    22345889999999999999999999999987654

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=5.3e-29  Score=234.24  Aligned_cols=271  Identities=14%  Similarity=0.167  Sum_probs=194.6

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCC----------CCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPG----------SKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA  180 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d  180 (504)
                      -..|.....++++..+++++ +.....|+...+.          ....  ...+.+|.+.|.+++|+| ++++|++++.|
T Consensus        20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~--~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D   97 (493)
T PTZ00421         20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASN--PPILLGQEGPIIDVAFNPFDPQKLFTASED   97 (493)
T ss_pred             eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCC--CceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence            34455555666643333333 5555666643321          1111  112348999999999999 88999999999


Q ss_pred             CcEEEEeCCCCCc-----cceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188        181 SNLSIWDLASPTP-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       181 g~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~  254 (504)
                      ++|++||+.+...     .....+.+|...|.+++|+|++ ++|++++.|++|+|||+++++.+..+.+|...|.+++|+
T Consensus        98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~s  177 (493)
T PTZ00421         98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWN  177 (493)
T ss_pred             CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEE
Confidence            9999999976431     2355678999999999999975 699999999999999999999999999999999999999


Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC-ceEEEEEcCCCCEEEEEe----CCCcEEEE
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLIVGG----EASNLSIW  329 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~----~dg~i~v~  329 (504)
                      |++++|++++.|++|++||+++++..               .....|.. ....+.|.+++..+++++    .|+.|++|
T Consensus       178 pdG~lLatgs~Dg~IrIwD~rsg~~v---------------~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklW  242 (493)
T PTZ00421        178 LDGSLLCTTSKDKKLNIIDPRDGTIV---------------SSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLW  242 (493)
T ss_pred             CCCCEEEEecCCCEEEEEECCCCcEE---------------EEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEE
Confidence            99999999999999999999988642               12223333 345677888887777654    47899999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc-CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH-YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  406 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  406 (504)
                      |+++...............+....|++++.  ++++++ .|+.|++||+..+.....    ........+..++|.|.
T Consensus       243 Dlr~~~~p~~~~~~d~~~~~~~~~~d~d~~--~L~lggkgDg~Iriwdl~~~~~~~~----~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        243 DTRKMASPYSTVDLDQSSALFIPFFDEDTN--LLYIGSKGEGNIRCFELMNERLTFC----SSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             eCCCCCCceeEeccCCCCceEEEEEcCCCC--EEEEEEeCCCeEEEEEeeCCceEEE----eeccCCCCCcceEeccc
Confidence            998754332222222333555667888888  555555 699999999987542221    11223445667888874

>KOG0772|consensus

Probab=99.97  E-value=1.1e-29  Score=222.11  Aligned_cols=304  Identities=17%  Similarity=0.221  Sum_probs=232.9

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEeec-CCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVRQFQ-GHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      ...+++|...|.++++.|.|..|++|+.|..|++||+....    ..+.+. .....|.+++|++.+..|++.+.....+
T Consensus       160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak  239 (641)
T KOG0772|consen  160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK  239 (641)
T ss_pred             eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence            56678899999999999999999999999999999987532    222222 2445799999999999999999899999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCcccee----eeccC
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKA----ELTSS  345 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~----~~~~~  345 (504)
                      ++|-...++..+..   +...........+|...+++.+|+|.. ..+++++.||++++||+...+.....    ...+.
T Consensus       240 l~DRdG~~~~e~~K---GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~  316 (641)
T KOG0772|consen  240 LLDRDGFEIVEFSK---GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGK  316 (641)
T ss_pred             EEccCCceeeeeec---cchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCc
Confidence            99977654322110   111111133445788889999999954 67899999999999999876432211    11234


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ...++..+|+++++  +++++..||.|++|+...............+.....|+++.||+||++|++-+.|+++++||++
T Consensus       317 Rv~~tsC~~nrdg~--~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr  394 (641)
T KOG0772|consen  317 RVPVTSCAWNRDGK--LIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR  394 (641)
T ss_pred             ccCceeeecCCCcc--hhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence            55788999999999  7999999999999998655444444333333444589999999999999999999999999998


Q ss_pred             CCCcce-eecccCCCCceeEEEECCCCCEEEEeeC------CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEE
Q psy17188        426 SPTPRI-KAELTSSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT  498 (504)
Q Consensus       426 ~~~~~~-~~~~~~~~~~v~~l~~s~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s  498 (504)
                      ..+... ....-.....-+.++|||+.++|++|..      .|.+.+||..+-+.+.++.-....|..+.|+|.-+.|+.
T Consensus       395 q~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~  474 (641)
T KOG0772|consen  395 QFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFA  474 (641)
T ss_pred             ccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheee
Confidence            755322 2222222334567799999999999864      578999999999999998877788999999999999999


Q ss_pred             ecCCCC
Q psy17188        499 GGLDNT  504 (504)
Q Consensus       499 ~s~Dgt  504 (504)
                      ++.||+
T Consensus       475 gsgdG~  480 (641)
T KOG0772|consen  475 GSGDGT  480 (641)
T ss_pred             ecCCCc
Confidence            999986

>KOG0308|consensus

Probab=99.97  E-value=2e-30  Score=232.87  Aligned_cols=347  Identities=19%  Similarity=0.326  Sum_probs=260.4

Q ss_pred             CcccCCCCCCcccCCCCCcccc-----ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeec
Q psy17188         84 QMQPVPFPPDALIGPGIPRHAR-----QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCL  156 (504)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~  156 (504)
                      +.+-.+..|+.+..|..+....     .+.++ .|.++|..++...+++.|++++ |-+|++|+...+. ...+..+  .
T Consensus        38 ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~~c~sti--r  114 (735)
T KOG0308|consen   38 RYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-TFCMSTI--R  114 (735)
T ss_pred             ceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-chhHhhh--h
Confidence            3344455555666665544332     35556 7999999999999997777777 9999999987753 2223333  3


Q ss_pred             CCCCceEEEEE-ccCCCEEEEecCCCcEEEEeCCCCCcc--------ceeeee-cCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        157 QRDNYIRSVKL-LPDGRTLIVGGEASNLSIWDLASPTPR--------IKAELT-SSAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       157 ~~~~~v~~~~~-s~~~~~l~~~~~dg~i~iw~~~~~~~~--------~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      .|.++|.|++. .++...+|+|+-|+.|.+||++++...        ....+. ++...|++++.++.+..+++|+..+.
T Consensus       115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~  194 (735)
T KOG0308|consen  115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD  194 (735)
T ss_pred             cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence            79999999999 789999999999999999999976321        122333 78889999999999999999999999


Q ss_pred             EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      +++||.++++.+..+++|+..|.++..++||..++++|.||+|++||+...++               ......|...+.
T Consensus       195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrC---------------l~T~~vH~e~VW  259 (735)
T KOG0308|consen  195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRC---------------LATYIVHKEGVW  259 (735)
T ss_pred             eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccce---------------eeeEEeccCceE
Confidence            99999999999999999999999999999999999999999999999998775               444667778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV  386 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~  386 (504)
                      ++..+|+-..+++|++||.|..-|+++...  ...+-....++..+......+.  +-++..|+.|+-|..+.       
T Consensus       260 aL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~--~tlick~daPv~~l~~~~~~~~--~WvtTtds~I~rW~~~~-------  328 (735)
T KOG0308|consen  260 ALQSSPSFTHVYSGGRDGNIYRTDLRNPAK--STLICKEDAPVLKLHLHEHDNS--VWVTTTDSSIKRWKLEP-------  328 (735)
T ss_pred             EEeeCCCcceEEecCCCCcEEecccCCchh--heEeecCCCchhhhhhccccCC--ceeeeccccceecCCcc-------
Confidence            999999999999999999999999988632  2222333346666766655553  35666788888887653       


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                                   ...+++.+++.. -+.+......+... .+..+  .+ ...++...++-.|.+++++-...|.+.+|
T Consensus       329 -------------~~~l~~s~~~~~-~~T~~~~~~~~~~~-tp~~v--i~-Gg~ai~k~~mL~dkRhVlTkDa~gnv~lw  390 (735)
T KOG0308|consen  329 -------------DIALSVSGDLDF-FSTDSNNHSCDLTN-TPDSV--IP-GGAAIKKHAMLNDKRHVLTKDAKGNVALW  390 (735)
T ss_pred             -------------ccccccCCCCCc-ccccCCCccccccC-CCcee--cc-CchhhhhhhhhcCcceEeeecCCCCEEEE
Confidence                         335555565555 33444455554322 11111  12 22345556777899999999999999999


Q ss_pred             EcCCcceEEEE
Q psy17188        467 DLHNQTLVRQF  477 (504)
Q Consensus       467 d~~~~~~~~~~  477 (504)
                      |+-..+.+..+
T Consensus       391 DIl~~~~~~d~  401 (735)
T KOG0308|consen  391 DILACVKVEDF  401 (735)
T ss_pred             Eeeeeeehhhc
Confidence            98766555444

>KOG1036|consensus

Probab=99.97  E-value=4.2e-29  Score=205.04  Aligned_cols=271  Identities=20%  Similarity=0.280  Sum_probs=222.4

Q ss_pred             cCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        203 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      ...|..+.|+|.++.|++++.||++++||.....+...++ |..++.+++|.+ ...+++|+.||.|+.+|+.++.    
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~----   86 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGN----   86 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCc----
Confidence            5679999999998899999999999999999987777777 999999999987 4589999999999999999987    


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                                  ......|...+.++.+++....+++|+.|++|++||.+......  ... ....|.++....+    .
T Consensus        87 ------------~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~--~~d-~~kkVy~~~v~g~----~  147 (323)
T KOG1036|consen   87 ------------EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG--TFD-QGKKVYCMDVSGN----R  147 (323)
T ss_pred             ------------ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc--ccc-cCceEEEEeccCC----E
Confidence                        56667889999999999988899999999999999998632222  222 2227777777666    6


Q ss_pred             eeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC--cceeecccCCC-
Q psy17188        363 FSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT--PRIKAELTSSA-  439 (504)
Q Consensus       363 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~-  439 (504)
                      ++.|..+..+.+||+++.....   +.....-+..++++++-|++.-.++++-||.|.+=.++...  ......++.|. 
T Consensus       148 LvVg~~~r~v~iyDLRn~~~~~---q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~  224 (323)
T KOG1036|consen  148 LVVGTSDRKVLIYDLRNLDEPF---QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRL  224 (323)
T ss_pred             EEEeecCceEEEEEcccccchh---hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeec
Confidence            8888999999999999865443   22222345678899999999889999999998876665441  12222333332 


Q ss_pred             --------CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        440 --------PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       440 --------~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                              .+|++++|+|-.+.||||+.||.|.+||+.+.+.+..+......|.+++|+.||..||.|+.
T Consensus       225 ~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  225 SEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             ccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence                    36899999999999999999999999999999999999887788999999999999999874

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=3e-28  Score=229.92  Aligned_cols=252  Identities=15%  Similarity=0.185  Sum_probs=188.9

Q ss_pred             ecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCe--------EEEeecCCCCC
Q psy17188        177 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQT--------LVRQFQGHTDG  247 (504)
Q Consensus       177 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~h~~~  247 (504)
                      |+.++.|++|+....  .....+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++.        .+..+.+|...
T Consensus        50 GG~~gvI~L~~~~r~--~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         50 GGLIGAIRLENQMRK--PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             CCceeEEEeeecCCC--ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            566788999998753  346678899999999999996 7899999999999999998642        34567889999


Q ss_pred             eEEEEEccCCCE-EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcE
Q psy17188        248 ASCIDISADGTK-LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  326 (504)
Q Consensus       248 v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  326 (504)
                      |.+++|+|++.. |++++.|++|++||+++++..                ....+...|.+++|+|+|++|++++.|+.|
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~----------------~~i~~~~~V~SlswspdG~lLat~s~D~~I  191 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA----------------FQINMPKKLSSLKWNIKGNLLSGTCVGKHM  191 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE----------------EEEecCCcEEEEEECCCCCEEEEEecCCEE
Confidence            999999998875 578999999999999988632                112245679999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC
Q psy17188        327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  406 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  406 (504)
                      ++||+++++.  ...+..|.+.+...                                            .+....|+++
T Consensus       192 rIwD~Rsg~~--i~tl~gH~g~~~s~--------------------------------------------~v~~~~fs~d  225 (568)
T PTZ00420        192 HIIDPRKQEI--ASSFHIHDGGKNTK--------------------------------------------NIWIDGLGGD  225 (568)
T ss_pred             EEEECCCCcE--EEEEecccCCceeE--------------------------------------------EEEeeeEcCC
Confidence            9999987632  22333332211000                                            0123456788


Q ss_pred             CCEEEEeeCCC----cEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee--
Q psy17188        407 GRTLIVGGEAS----NLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--  479 (504)
Q Consensus       407 g~~l~~~~~dg----~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--  479 (504)
                      +.+|++++.++    .|+|||+++ .+++....+..+...+......+++.++++|+.|+.|++|++..+.. ..+..  
T Consensus       226 ~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~-~~l~~~~  304 (568)
T PTZ00420        226 DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSI-RKVNEYK  304 (568)
T ss_pred             CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcE-Eeecccc
Confidence            88888877664    699999985 44454545555555554555566789999999999999999987743 22222  


Q ss_pred             cCCceEEEEEccCC
Q psy17188        480 HTDGASCIDISADG  493 (504)
Q Consensus       480 h~~~v~~~~~s~d~  493 (504)
                      +..++.+++|.|+.
T Consensus       305 s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        305 SCSPFRSFGFLPKQ  318 (568)
T ss_pred             cCCCccceEEcccc
Confidence            55678899999964

>KOG0294|consensus

Probab=99.97  E-value=3.2e-28  Score=200.27  Aligned_cols=262  Identities=23%  Similarity=0.386  Sum_probs=205.7

Q ss_pred             eeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC--EEEEEeCCCcEEE
Q psy17188        152 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAV  229 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~i  229 (504)
                      .+....|.+.|++++.+  +.++|+|+.|-+|+|||+....  ....+..|.+.|+++.|.+.-.  .|++|+.||.|.+
T Consensus        36 lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~--qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   36 LFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK--QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             cccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh--hhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            34555799999999995  9999999999999999998644  3667788999999999998765  8999999999999


Q ss_pred             EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      |+.....++..+++|.+.|+.++++|.+++.++.+.|+.++.||+-.|+.-                ....-......+.
T Consensus       112 w~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a----------------~v~~L~~~at~v~  175 (362)
T KOG0294|consen  112 WRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA----------------FVLNLKNKATLVS  175 (362)
T ss_pred             EEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc----------------eeeccCCcceeeE
Confidence            999999999999999999999999999999999999999999999988732                1122223345599


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      |+|.|.+++++..+ .|-+|.+.+.......                                                 
T Consensus       176 w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i-------------------------------------------------  205 (362)
T KOG0294|consen  176 WSPQGDHFVVSGRN-KIDIYQLDNASVFREI-------------------------------------------------  205 (362)
T ss_pred             EcCCCCEEEEEecc-EEEEEecccHhHhhhh-------------------------------------------------
Confidence            99999988888775 5778877654211000                                                 


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEE--CCCCCEEEEeeCCCcEEEEE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~--s~~~~~l~s~~~dg~i~iwd  467 (504)
                         .....+.++.|. ++..|++|.+|+.|.+||.++.  .....+.+|...|..+.+  .|++.+|++++.||.|+|||
T Consensus       206 ---~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~--~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd  279 (362)
T KOG0294|consen  206 ---ENPKRILCATFL-DGSELLVGGDNEWISLKDTDSD--TPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWD  279 (362)
T ss_pred             ---hccccceeeeec-CCceEEEecCCceEEEeccCCC--ccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEE
Confidence               001223355554 4568999999999999999874  445667788888988874  46788999999999999999


Q ss_pred             cCCc-----ceEEEEeecCCceEEEEEc
Q psy17188        468 LHNQ-----TLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       468 ~~~~-----~~~~~~~~h~~~v~~~~~s  490 (504)
                      ++..     +++..+.. ...++|+...
T Consensus       280 ~~~~~k~~~~~l~e~n~-~~RltCl~~~  306 (362)
T KOG0294|consen  280 IDMETKKRPTLLAELNT-NVRLTCLRVK  306 (362)
T ss_pred             ccccccCCcceeEEeec-CCccceeeeh
Confidence            9765     44555443 4567777653

>KOG0268|consensus

Probab=99.97  E-value=1.3e-30  Score=218.13  Aligned_cols=278  Identities=18%  Similarity=0.319  Sum_probs=226.1

Q ss_pred             ceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....+.+|.+.|.|++=+|.. ..+++|+.||.|+|||+.+..+..+++.|.+.|..|++..  ..+++++.|.+|+.|.
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk  135 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWK  135 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeee
Confidence            345678999999999999977 6899999999999999999999999999999999999986  5789999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      ++..                 ..........+..+.-+..+..++++++  .|.|||.+...+  ...+.-....+.++.
T Consensus       136 ~~~~-----------------p~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~P--v~smswG~Dti~svk  194 (433)
T KOG0268|consen  136 IDGP-----------------PLHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNP--VSSMSWGADSISSVK  194 (433)
T ss_pred             ccCC-----------------cceeeeccccccccccccccccccccCc--eeeecccccCCc--cceeecCCCceeEEe
Confidence            8753                 2222334455666766666777888765  599999987644  344444555899999


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      ++|.... +++++..|+.|.+||+++......+..      ...-+.++|+|.+--++++++|..++.||++... ....
T Consensus       195 fNpvETs-ILas~~sDrsIvLyD~R~~~Pl~KVi~------~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~  266 (433)
T KOG0268|consen  195 FNPVETS-ILASCASDRSIVLYDLRQASPLKKVIL------TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLN  266 (433)
T ss_pred             cCCCcch-heeeeccCCceEEEecccCCccceeee------eccccceecCccccceeeccccccceehhhhhhc-ccch
Confidence            9998876 788888999999999998755444432      2334589999988888999999999999998654 3445


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCCCEEEEecCCC
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ...+|..+|.++.|||.|+-+++|+.|.+|+||.+..+.-...+.. -...|.++.||.|.+++++||+|+
T Consensus       267 v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~  337 (433)
T KOG0268|consen  267 VHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDG  337 (433)
T ss_pred             hhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCc
Confidence            5678999999999999999999999999999999988765444321 124699999999999999999997

>KOG0274|consensus

Probab=99.97  E-value=1e-28  Score=232.39  Aligned_cols=284  Identities=22%  Similarity=0.385  Sum_probs=236.1

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      +...+.+..|.  ..++++++.+.+|++|+..++.. ....+.+|.+.|.++++...+.+|++|+.|.++++||..++++
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~-i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C  283 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYL-ILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGEC  283 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceE-EEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcE
Confidence            56678888887  66899999999999999987553 2344899999999999987788999999999999999999999


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      ...+.+|.+.|.++...+  .++++|+.|.+|++|++.++..               ......|...|.++..+  +.++
T Consensus       284 ~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~---------------l~l~~~h~~~V~~v~~~--~~~l  344 (537)
T KOG0274|consen  284 THSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGAC---------------LNLLRGHTGPVNCVQLD--EPLL  344 (537)
T ss_pred             EEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcce---------------EEEeccccccEEEEEec--CCEE
Confidence            999999999999998764  4788899999999999998874               22223389999999998  7899


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC-CCCcccccccccCCC
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG-SKTPVSQLDCLQRDN  396 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~~~~~  396 (504)
                      ++|+.|++|++||+.+.  .....+.+|...|.++.+... .  .+++++.|+.|++||++... ...     ....|..
T Consensus       345 vsgs~d~~v~VW~~~~~--~cl~sl~gH~~~V~sl~~~~~-~--~~~Sgs~D~~IkvWdl~~~~~c~~-----tl~~h~~  414 (537)
T KOG0274|consen  345 VSGSYDGTVKVWDPRTG--KCLKSLSGHTGRVYSLIVDSE-N--RLLSGSLDTTIKVWDLRTKRKCIH-----TLQGHTS  414 (537)
T ss_pred             EEEecCceEEEEEhhhc--eeeeeecCCcceEEEEEecCc-c--eEEeeeeccceEeecCCchhhhhh-----hhcCCcc
Confidence            99999999999999966  677788889999999988875 3  79999999999999998762 222     2224555


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      -+..+.+  .+++|++++.|++|++||..+++.+...... +...|..+++.  ...+++++.||.+++||++++++...
T Consensus       415 ~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~  489 (537)
T KOG0274|consen  415 LVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRT  489 (537)
T ss_pred             ccccccc--ccceeEeccccccEEEeecccCceeeeeccC-CcccEEEeecC--cceEEEEecCCeeEEEecccCchhhh
Confidence            5544444  5789999999999999999988776665544 66778877776  56788899999999999999998876


Q ss_pred             Ee
Q psy17188        477 FQ  478 (504)
Q Consensus       477 ~~  478 (504)
                      +-
T Consensus       490 l~  491 (537)
T KOG0274|consen  490 LL  491 (537)
T ss_pred             hh
Confidence            63

>KOG0300|consensus

Probab=99.97  E-value=3.1e-29  Score=206.40  Aligned_cols=298  Identities=16%  Similarity=0.280  Sum_probs=241.5

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +.+..+ ||.+.|..++......++.+++ |.+.+||.++++.+...+.     +|.+.|++++|++.+.++++++.|++
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~-----GH~GSVNsikfh~s~~L~lTaSGD~t  213 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYT-----GHTGSVNSIKFHNSGLLLLTASGDET  213 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeec-----ccccceeeEEeccccceEEEccCCcc
Confidence            344455 8999999999988777888888 9999999999986544443     99999999999999999999999999


Q ss_pred             EEEEeC------CCC--------C------------------------ccceeeeecCcCceEEEEECCCCCEEEEEeCC
Q psy17188        183 LSIWDL------ASP--------T------------------------PRIKAELTSSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       183 i~iw~~------~~~--------~------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                      ..||..      ..+        +                        ......+.+|...|.+..|...++.+++++.|
T Consensus       214 aHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD  293 (481)
T KOG0300|consen  214 AHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD  293 (481)
T ss_pred             hHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc
Confidence            999972      110        0                        11345678899999999999999999999999


Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      .+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||++..-..              ...+.+|...
T Consensus       294 RTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~s--------------V~VFQGHtdt  359 (481)
T KOG0300|consen  294 RTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQS--------------VAVFQGHTDT  359 (481)
T ss_pred             ccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcce--------------eeeecccccc
Confidence            99999999999999999999999999999999999999999999999999853211              3345678899


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      |+++.|..+.+ +++|+.|.+|++||+++.....  .......++..++++..++  +++.-..+..|++||+.......
T Consensus       360 VTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRspl--ATIRtdS~~NRvavs~g~~--iIAiPhDNRqvRlfDlnG~RlaR  434 (481)
T KOG0300|consen  360 VTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPL--ATIRTDSPANRVAVSKGHP--IIAIPHDNRQVRLFDLNGNRLAR  434 (481)
T ss_pred             eeEEEEecCCc-eeecCCCceEEEeeeccccCcc--eeeecCCccceeEeecCCc--eEEeccCCceEEEEecCCCcccc
Confidence            99999997654 8999999999999998764322  1222334788888888877  78888889999999998654332


Q ss_pred             cccccccccCCCceEEEEEcCCCC--EEEEeeCCCcEEEeeCCCC
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~--~l~~~~~dg~i~iwd~~~~  427 (504)
                       +.......|...|+|++|..+..  -|++++-|..+.-|.+...
T Consensus       435 -lPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  435 -LPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             -CCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence             22334456888899999986532  4778888999999998754

>KOG1036|consensus

Probab=99.97  E-value=2.7e-28  Score=200.36  Aligned_cols=275  Identities=19%  Similarity=0.283  Sum_probs=216.0

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      .+..|.++.|+|.+..|++++.||++++||+.....   ...-.|..++.+++|.++ ..+++|+.||.|+.+|+.+++.
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l---~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~   87 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSL---KLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE   87 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhh---hhheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc
Confidence            467899999999999999999999999999987643   223357788999999874 5789999999999999998876


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      ...- .|..+|.|+.+++....+++|+.|++|++||.+...                ..........|.++...  ++.|
T Consensus        88 ~~ig-th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~----------------~~~~~d~~kkVy~~~v~--g~~L  148 (323)
T KOG1036|consen   88 DQIG-THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV----------------VVGTFDQGKKVYCMDVS--GNRL  148 (323)
T ss_pred             eeec-cCCCceEEEEeeccCCeEEEcccCccEEEEeccccc----------------cccccccCceEEEEecc--CCEE
Confidence            5544 499999999999987899999999999999999743                12222333467777664  7789


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-Ccccccccc----
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCL----  392 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~----  392 (504)
                      ++|+.+..+.+||+++...........-...+.++++.|++.  -++.++-||.|.+=.++..... ...-.++++    
T Consensus       149 vVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~e--Gy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~  226 (323)
T KOG1036|consen  149 VVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGE--GYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSE  226 (323)
T ss_pred             EEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCC--ceEEEeecceEEEEccCCchHHhhhceeEEeeeccc
Confidence            999999999999999887666555566667899999999777  5888889999888766654111 111111111    


Q ss_pred             ---cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188        393 ---QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       393 ---~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                         ..-.+|++++|+|-...|++|+.||.|.+||+.+.+.+  ..+......|..++|+.||..||+++.
T Consensus       227 ~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl--~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  227 KDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRL--KQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             CCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhh--hhccCCCCceEEEEeccCCCeEEEEec
Confidence               12246899999999999999999999999999876543  345555677999999999999999864

>KOG1445|consensus

Probab=99.97  E-value=1.4e-28  Score=220.63  Aligned_cols=187  Identities=19%  Similarity=0.326  Sum_probs=140.9

Q ss_pred             CEEEE--EeCCCcEEEEeCCCCCccceeeec--cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc--c
Q psy17188        315 RTLIV--GGEASNLSIWDLASPTPRIKAELT--SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS--Q  388 (504)
Q Consensus       315 ~~l~~--~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~  388 (504)
                      .++++  .+..|.|-||+++.........+.  .....|+.+.|.|-... .++.++.|+.|++|.+..++......  .
T Consensus       592 ~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~-rLAVa~ddg~i~lWr~~a~gl~e~~~tPe  670 (1012)
T KOG1445|consen  592 KRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDE-RLAVATDDGQINLWRLTANGLPENEMTPE  670 (1012)
T ss_pred             ceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChH-HeeecccCceEEEEEeccCCCCcccCCcc
Confidence            34443  355789999999876544333332  24557899999996655 68889999999999998765443322  2


Q ss_pred             cccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        389 LDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      .....|...|+++.|+| -...|++++.|-+|++||+.+.+.  ...+.+|...|..++|||||+.+|+.+.||+|++|+
T Consensus       671 ~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~--~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  671 KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKL--YSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhh--hheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence            23346888999999999 345889999999999999997754  455778999999999999999999999999999999


Q ss_pred             cCCcce-EEEEeecC-CceEEEEEccCCCEEEEecCCCC
Q psy17188        468 LHNQTL-VRQFQGHT-DGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       468 ~~~~~~-~~~~~~h~-~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      -++++. +..-++.. ..-..+.|.-||+++++.|.|..
T Consensus       749 Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~  787 (1012)
T KOG1445|consen  749 PRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKS  787 (1012)
T ss_pred             CCCCCCccccCCCCccCcceeEEEEecCcEEEEeccccc
Confidence            887653 33322211 22346789999999999998863

>KOG2096|consensus

Probab=99.97  E-value=3.3e-28  Score=200.45  Aligned_cols=305  Identities=16%  Similarity=0.214  Sum_probs=217.5

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~  188 (504)
                      +|.+.|++++|+.||+.|++.+ |+.|+||+++.-..... ..+...-.-+.-+.+.|+||.+-+++. -...++++|.+
T Consensus        84 gH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eH-r~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~  162 (420)
T KOG2096|consen   84 GHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEH-RCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKL  162 (420)
T ss_pred             ccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhh-hHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEe
Confidence            8999999999999999999988 99999999876322211 111111122357889999998866654 45567999987


Q ss_pred             CCCCc---cce-------eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        189 ASPTP---RIK-------AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       189 ~~~~~---~~~-------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      ...+.   ...       .....|.-.+..+-...++.+|++++.|..|.+|+++ |+.+..+......-+..+.+|+|+
T Consensus       163 ~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GR  241 (420)
T KOG2096|consen  163 VKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGR  241 (420)
T ss_pred             eecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCc
Confidence            54221   000       0112355556677777788899999999999999998 888888887777778889999999


Q ss_pred             EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc
Q psy17188        259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  338 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~  338 (504)
                      ++++++..-.+++|.+--++-       ..-......+...+|...|..++|+++.+.+++.+.||++++||.+-.-   
T Consensus       242 Fia~~gFTpDVkVwE~~f~kd-------G~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY---  311 (420)
T KOG2096|consen  242 FIAVSGFTPDVKVWEPIFTKD-------GTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRY---  311 (420)
T ss_pred             EEEEecCCCCceEEEEEeccC-------cchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceE---
Confidence            999999999999998643220       0111223366778899999999999999999999999999999976321   


Q ss_pred             eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc
Q psy17188        339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  418 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~  418 (504)
                        ......            +  ++-.+                    . ............++++|+|+.||.+. ...
T Consensus       312 --~~~qDp------------k--~Lk~g--------------------~-~pl~aag~~p~RL~lsP~g~~lA~s~-gs~  353 (420)
T KOG2096|consen  312 --EAGQDP------------K--ILKEG--------------------S-APLHAAGSEPVRLELSPSGDSLAVSF-GSD  353 (420)
T ss_pred             --ecCCCc------------h--HhhcC--------------------C-cchhhcCCCceEEEeCCCCcEEEeec-CCc
Confidence              000000            0  00000                    0 00011122333899999999888764 456


Q ss_pred             EEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        419 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       419 i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      +++|..++++..... ...|...|.+++|+++|+++++++ |..++++.
T Consensus       354 l~~~~se~g~~~~~~-e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  354 LKVFASEDGKDYPEL-EDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             eEEEEcccCccchhH-HHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            999999887654333 456788899999999999999986 56688775

>KOG2096|consensus

Probab=99.97  E-value=2.6e-28  Score=201.11  Aligned_cols=307  Identities=16%  Similarity=0.241  Sum_probs=213.3

Q ss_pred             EEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee--eeecCcCceEEEEECC
Q psy17188        136 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA--ELTSSAPACYALAISP  213 (504)
Q Consensus       136 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~v~~~~~s~  213 (504)
                      ..-|+.+......++..-.+.+|.+.|++++|+.||++|++++.|+.|++|++++...+...  ...-..+.-+.+.|.|
T Consensus        63 ~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~Fap  142 (420)
T KOG2096|consen   63 NDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAP  142 (420)
T ss_pred             hhhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECC
Confidence            34455554443444444445589999999999999999999999999999999864322111  1111122357899999


Q ss_pred             CCCEEEE-EeCCCcEEEEECCCCe---EEE---------eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE
Q psy17188        214 DSKVCFS-CCSDGNIAVWDLHNQT---LVR---------QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK  280 (504)
Q Consensus       214 ~~~~l~~-~~~dg~i~iwd~~~~~---~~~---------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~  280 (504)
                      |-+-++. .-...++++|.+...+   ...         .-+.|.-.+..+-....+.+|++++.|..|.+|+++ |++ 
T Consensus       143 Dc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~-  220 (420)
T KOG2096|consen  143 DCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQL-  220 (420)
T ss_pred             CcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cce-
Confidence            9875544 4455679999875321   111         112366677777777788899999999999999999 543 


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                                    ..........-...+.+|+|+++++++..-.+++|.+--                     ..+|. 
T Consensus       221 --------------L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f---------------------~kdG~-  264 (420)
T KOG2096|consen  221 --------------LQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIF---------------------TKDGT-  264 (420)
T ss_pred             --------------eeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEe---------------------ccCcc-
Confidence                          111122233346678999999999998888899987421                     11111 


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-------Cccee-
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-------TPRIK-  432 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-------~~~~~-  432 (504)
                                 +          ......+...+|...|..++|+++.+.+++.+.||++++||++-.       +.+.. 
T Consensus       265 -----------f----------qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g  323 (420)
T KOG2096|consen  265 -----------F----------QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEG  323 (420)
T ss_pred             -----------h----------hhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcC
Confidence                       1          111122333478889999999999999999999999999997521       11111 


Q ss_pred             -ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-ecCCceEEEEEccCCCEEEEecCC
Q psy17188        433 -AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       433 -~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                       ..+......-..++++|+|+.||.+. ...+++|..++|+....++ .|...|.+++|++||++++|+|+-
T Consensus       324 ~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr  394 (420)
T KOG2096|consen  324 SAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDR  394 (420)
T ss_pred             CcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecce
Confidence             11222233345899999999988764 4469999999988776665 488999999999999999999863

>KOG0274|consensus

Probab=99.97  E-value=1.5e-28  Score=231.33  Aligned_cols=283  Identities=18%  Similarity=0.363  Sum_probs=233.0

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      |...+.+..|.  ..++.+++ |.+|++||..++..    ....+.+|.+.|.++++..-+.+|++|+.|.++++||..+
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~----i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s  280 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYL----ILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST  280 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceE----EEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC
Confidence            67788888888  44555555 99999999877522    2222559999999999998889999999999999999988


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      +++  ...+.+|...|.++...+  ..+++|+.|.+|++|++.++..+..+.+|.++|.++..+  +.++++|+.|++|+
T Consensus       281 g~C--~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~  354 (537)
T KOG0274|consen  281 GEC--THSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVK  354 (537)
T ss_pred             CcE--EEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEE
Confidence            775  777889999999988754  478889999999999999999999999999999999998  77999999999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  350 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~  350 (504)
                      +||+.++++               .....+|...|.++.+.+. ..++.|+.|+.|++||+++.. .....+..|..-+.
T Consensus       355 VW~~~~~~c---------------l~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~-~c~~tl~~h~~~v~  417 (537)
T KOG0274|consen  355 VWDPRTGKC---------------LKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR-KCIHTLQGHTSLVS  417 (537)
T ss_pred             EEEhhhcee---------------eeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh-hhhhhhcCCccccc
Confidence            999998876               4455679999999988776 889999999999999999874 45566677776665


Q ss_pred             eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc
Q psy17188        351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  430 (504)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~  430 (504)
                      .+.+...    .+++++.|+.|++||....+....+...    +...|..+++.  ...+++++.|+.+++||+++++..
T Consensus       418 ~l~~~~~----~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~----~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~  487 (537)
T KOG0274|consen  418 SLLLRDN----FLVSSSADGTIKLWDAEEGECLRTLEGR----HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLI  487 (537)
T ss_pred             ccccccc----eeEeccccccEEEeecccCceeeeeccC----CcccEEEeecC--cceEEEEecCCeeEEEecccCchh
Confidence            5555444    8999999999999999887655544332    45667777776  467889999999999999988765


Q ss_pred             eee
Q psy17188        431 IKA  433 (504)
Q Consensus       431 ~~~  433 (504)
                      ...
T Consensus       488 ~~l  490 (537)
T KOG0274|consen  488 RTL  490 (537)
T ss_pred             hhh
Confidence            543

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=1.9e-27  Score=224.52  Aligned_cols=248  Identities=14%  Similarity=0.194  Sum_probs=184.6

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCc------cceeeeecCcCc
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTP------RIKAELTSSAPA  205 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~  205 (504)
                      ++.|++|+....   ..+.  .+.+|.+.|.+++|+|+ +++|++|+.|++|+|||+.+...      .....+.+|...
T Consensus        53 ~gvI~L~~~~r~---~~v~--~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         53 IGAIRLENQMRK---PPVI--KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             eeEEEeeecCCC---ceEE--EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            788999997652   2233  34489999999999996 78999999999999999975431      123457789999


Q ss_pred             eEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        206 CYALAISPDSKV-CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       206 v~~~~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      |.+++|+|++.. |++++.|++|++||+++++.+..+. |...|.+++|+|+|++|++++.|+.|++||+++++..    
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i----  202 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA----  202 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE----
Confidence            999999998875 5789999999999999998887776 6788999999999999999999999999999998742    


Q ss_pred             cCCCCCCCcccceecccCCce-----EEEEEcCCCCEEEEEeCCC----cEEEEeCCCCC-ccceeeeccCCCceeeEEE
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYI-----RSVKLLPDGRTLIVGGEAS----NLSIWDLASPT-PRIKAELTSSAPACYALAI  354 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~  354 (504)
                                 .....|.+.+     ....|++++.+|++++.++    +|++||++... ......+..+...+.....
T Consensus       203 -----------~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D  271 (568)
T PTZ00420        203 -----------SSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYD  271 (568)
T ss_pred             -----------EEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeee
Confidence                       1223344332     2334568889999887764    79999998633 2333333333333333333


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  407 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g  407 (504)
                      .+++.  ++++|..|+.|++|++..+.    +..+....+..++..++|.|+.
T Consensus       272 ~~tg~--l~lsGkGD~tIr~~e~~~~~----~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        272 ESTGL--IYLIGKGDGNCRYYQHSLGS----IRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             CCCCC--EEEEEECCCeEEEEEccCCc----EEeecccccCCCccceEEcccc
Confidence            34444  78899999999999997542    2233334456777889999964

>KOG0641|consensus

Probab=99.97  E-value=5e-27  Score=184.27  Aligned_cols=290  Identities=17%  Similarity=0.211  Sum_probs=228.6

Q ss_pred             CCCCcceEEEECCCCCcccCCCCCCcccCCCC------------Ccc---ccceeeecCCCcEEEEEEcCCCcEEEEec-
Q psy17188         69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGI------------PRH---ARQINTLSHGEVVCAVTISNPTKYVYTGG-  132 (504)
Q Consensus        69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~------------~~~---~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-  132 (504)
                      .....+.+++|.|.|.+.+++.....+.+-..            +.+   ......-.|.+.|+|.+|||+|++|++|+ 
T Consensus        30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn  109 (350)
T KOG0641|consen   30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN  109 (350)
T ss_pred             cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC
Confidence            34567888999999988888887665432211            111   12223337999999999999999999999 


Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCEEEEec-CCCcEEEEeCCCCCccceeeeecCcCceE
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACY  207 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~v~  207 (504)
                      |.+|++..+........-..+.+.-|++.|..++|..+    +..|++++ .|..|++-|...++  ....+.+|.+.|.
T Consensus       110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~--~~~a~sghtghil  187 (350)
T KOG0641|consen  110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ--GFHALSGHTGHIL  187 (350)
T ss_pred             CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC--cceeecCCcccEE
Confidence            99999987766544444455556679999999999763    56777765 46667777776655  4677889999888


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC--C-----CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE
Q psy17188        208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--H-----TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK  280 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--h-----~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~  280 (504)
                      ++ ++=++-++++|+.|.+|++||++-..++.++..  |     ...|.+++..|.|++|++|-.|....+||++.++. 
T Consensus       188 al-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~-  265 (350)
T KOG0641|consen  188 AL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRM-  265 (350)
T ss_pred             EE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCce-
Confidence            76 333678999999999999999999888887642  2     35789999999999999999999999999999985 


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CccceeeeccCCCceeeEEECCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--TPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                                    ......|...|+++.|+|...++++++.|..|++-|++..  ..........|...+..+.|+|..
T Consensus       266 --------------iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d  331 (350)
T KOG0641|consen  266 --------------IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQD  331 (350)
T ss_pred             --------------eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCcc
Confidence                          4556788899999999999999999999999999998753  234455566788889999999987


Q ss_pred             CCceeeeccCCCeEEEEecC
Q psy17188        359 KSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~  378 (504)
                      -  -|++.+.|.++.+|-+.
T Consensus       332 ~--sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  332 F--SFISSSADKTATLWALN  349 (350)
T ss_pred             c--eeeeccCcceEEEeccC
Confidence            6  68889999999999753

>KOG0300|consensus

Probab=99.97  E-value=2.8e-28  Score=200.87  Aligned_cols=290  Identities=16%  Similarity=0.244  Sum_probs=246.6

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC---
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL---  232 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~---  232 (504)
                      .+|+..|..++-......+.+++.|.+.+||.++++.+  .....+|.+.|+++.|++.+.++++++.|++-.||..   
T Consensus       145 ~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~C--L~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~  222 (481)
T KOG0300|consen  145 EGHKDGIWHVAADSTQPICGTASADHTARIWSLESGAC--LATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVN  222 (481)
T ss_pred             cccccceeeehhhcCCcceeecccccceeEEeeccccc--eeeecccccceeeEEeccccceEEEccCCcchHHHHHhhc
Confidence            48999999999988888999999999999999998875  6778999999999999999999999999999999962   


Q ss_pred             ---CC----------------------------------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        233 ---HN----------------------------------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       233 ---~~----------------------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                         ..                                  ..++..+.+|.+.|.+..|...|+.+++++.|.+..+||++
T Consensus       223 ~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVE  302 (481)
T KOG0300|consen  223 WEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVE  302 (481)
T ss_pred             CcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeec
Confidence               11                                  02456688999999999999999999999999999999999


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      ++++               .....+|+...+.++-+|..+++++.+.|.+.++||++. .......+++|...+++..|.
T Consensus       303 tge~---------------v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe-aI~sV~VFQGHtdtVTS~vF~  366 (481)
T KOG0300|consen  303 TGEV---------------VNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE-AIQSVAVFQGHTDTVTSVVFN  366 (481)
T ss_pred             cCce---------------eccccCcchhccccccCCcceEEEEeccCceeEeccchh-hcceeeeecccccceeEEEEe
Confidence            9986               444568888999999999999999999999999999984 445667889999999999999


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee--e
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK--A  433 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~--~  433 (504)
                      -+.+   +++++.|.+|++||+++......  .   .....+++.++.+..+..|+.--++..|++||++.......  .
T Consensus       367 ~dd~---vVSgSDDrTvKvWdLrNMRsplA--T---IRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrt  438 (481)
T KOG0300|consen  367 TDDR---VVSGSDDRTVKVWDLRNMRSPLA--T---IRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRT  438 (481)
T ss_pred             cCCc---eeecCCCceEEEeeeccccCcce--e---eecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcc
Confidence            9886   89999999999999987643322  2   23467788999999888999998899999999986543322  2


Q ss_pred             cccCCCCceeEEEECCCC--CEEEEeeCCCcEEEEEcCCc
Q psy17188        434 ELTSSAPACYALAISPDS--KVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~--~~l~s~~~dg~i~iwd~~~~  471 (504)
                      .-.+|...|+|++|..+.  .-|++++-|..+.=|++...
T Consensus       439 sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  439 SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             cccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence            456888899999998653  35789999999999998654

>KOG2048|consensus

Probab=99.97  E-value=3.1e-26  Score=207.24  Aligned_cols=364  Identities=18%  Similarity=0.309  Sum_probs=261.5

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      ..+|+++||+.+.+.||.+. ||.|.||++...-..   ...-..+.+..|.+++|++ +..|++.+.+|.|.-||+.+.
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~---~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~l  100 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFL---EPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTL  100 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCcee---eEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccC
Confidence            46899999999998899888 999999999874221   1122225678899999995 556888888999999999977


Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--eecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      ++  ........+.|++++.+|.+..++.|+.||.+..++...++...  .+...++.|.+++|+|++..|++|+.||.|
T Consensus       101 k~--~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~I  178 (691)
T KOG2048|consen  101 KQ--KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVI  178 (691)
T ss_pred             ce--eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceE
Confidence            64  56667778889999999999999999999988888888776554  345567899999999999999999999999


Q ss_pred             EEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        270 RSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       270 ~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      ++||...+.-.. .......        .......-|.++.+-.++ .|++|...|+|.+||...+  ........|...
T Consensus       179 riwd~~~~~t~~~~~~~~d~--------l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~g--TLiqS~~~h~ad  247 (691)
T KOG2048|consen  179 RIWDVKSGQTLHIITMQLDR--------LSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFG--TLIQSHSCHDAD  247 (691)
T ss_pred             EEEEcCCCceEEEeeecccc--------cccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCc--chhhhhhhhhcc
Confidence            999999876322 1111100        001123347788887555 5999999999999999887  455566778889


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                      |.+++..+++.  .+.+++.|+.+..|........ -+.......|...+.+++..++  .+++|+.|..+.+-.....+
T Consensus       248 Vl~Lav~~~~d--~vfsaGvd~~ii~~~~~~~~~~-wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~  322 (691)
T KOG2048|consen  248 VLALAVADNED--RVFSAGVDPKIIQYSLTTNKSE-WVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFK  322 (691)
T ss_pred             eeEEEEcCCCC--eEEEccCCCceEEEEecCCccc-eeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccC
Confidence            99999999988  6888889999888887765442 3334444567888999999987  89999999998887655321


Q ss_pred             cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc---------ceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       429 ~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      ...-. .+.....-..+...|..++++ -=.+..+.+|.+.+.         .+++-.......|.+.+.||||++|+.+
T Consensus       323 ~~~h~-~~~~~p~~~~v~~a~~~~L~~-~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~s  400 (691)
T KOG2048|consen  323 NMDHR-QKNLFPASDRVSVAPENRLLV-LWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIS  400 (691)
T ss_pred             chhhh-ccccccccceeecCccceEEE-EeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEe
Confidence            11100 000000001123334333333 333455777776554         1222222334569999999999999987


Q ss_pred             c
Q psy17188        500 G  500 (504)
Q Consensus       500 s  500 (504)
                      .
T Consensus       401 t  401 (691)
T KOG2048|consen  401 T  401 (691)
T ss_pred             e
Confidence            5

>KOG1332|consensus

Probab=99.96  E-value=1.3e-28  Score=195.36  Aligned_cols=252  Identities=17%  Similarity=0.267  Sum_probs=208.5

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~  187 (504)
                      .|++.|-.+...--|+.|||++ |++|+|+.++.......+..  +.+|.++|..++|..  -|.+||+++.||.|.||.
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~--L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAE--LTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeE--ecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            6888888888888899999988 99999999988765444444  449999999999987  899999999999999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccC---C--
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISAD---G--  257 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~---~--  257 (504)
                      -.+++.........|...|++++|.|.  |-.|++++.||.|.|.+.++.   ...+....|.-.|++++|.|.   |  
T Consensus        87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~  166 (299)
T KOG1332|consen   87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSL  166 (299)
T ss_pred             cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccc
Confidence            998887778888999999999999995  458999999999999998764   233456679999999999985   4  


Q ss_pred             ---------CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC----CEEEEEeCCC
Q psy17188        258 ---------TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG----RTLIVGGEAS  324 (504)
Q Consensus       258 ---------~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg  324 (504)
                               +.|++|+.|..|+||+...++.+.             ......|.+.|+.++|.|.-    .+|+++++||
T Consensus       167 ~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~-------------e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg  233 (299)
T KOG1332|consen  167 VDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL-------------ERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDG  233 (299)
T ss_pred             cccCcccccceeeccCCccceeeeecCCcchhh-------------hhhhhhcchhhhhhhhccccCCCceeeEEecCCC
Confidence                     579999999999999999874321             33367899999999999953    5799999999


Q ss_pred             cEEEEeCCCCCcc-ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        325 NLSIWDLASPTPR-IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       325 ~i~v~d~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ++.||..+..... ....+......+..+.|+..|.  +++.++.|+.+.+|.-..
T Consensus       234 ~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn--~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  234 TVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGN--ILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             cEEEEEecCccCcccccccccCCcceEEEEEecccc--EEEEecCCcEEEEEEeCC
Confidence            9999987643222 2223334566899999999999  899999999999997654

>KOG2055|consensus

Probab=99.96  E-value=1.1e-27  Score=206.96  Aligned_cols=293  Identities=16%  Similarity=0.235  Sum_probs=235.5

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC-EEEEecCCCcEEEEeCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~  190 (504)
                      .+.|++|.|+|...+|.+++ |++++||.++.. ....++.+.+  ...+|.+.+|.|+|. .+++++....++.||+.+
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk-~N~~lqS~~l--~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~  289 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGK-VNPKLQSIHL--EKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLET  289 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCc-cChhheeeee--ccCccceeeecCCCceEEEecccceEEEEeeccc
Confidence            57899999999999999998 999999999763 2334444433  467899999999999 889999999999999998


Q ss_pred             CCccceeeeecCc-CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        191 PTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       191 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      .+......+.++. ..+.....++++++|+..+..|.|.+....+++.+..++ -.+.|..++|+.|++.|++++.+|.|
T Consensus       290 ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV  368 (514)
T KOG2055|consen  290 AKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEV  368 (514)
T ss_pred             cccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceE
Confidence            7766555555554 346677889999999999999999999999999999998 78899999999999999999999999


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC----CCccceeeeccC
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS----PTPRIKAELTSS  345 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~  345 (504)
                      .+||++...+.-              .......-.-++++.++++.+|++|+..|.|.|||.++    ..+.+...+..-
T Consensus       369 ~v~nl~~~~~~~--------------rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNL  434 (514)
T KOG2055|consen  369 YVWNLRQNSCLH--------------RFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNL  434 (514)
T ss_pred             EEEecCCcceEE--------------EEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhh
Confidence            999999876421              11111122346778889999999999999999999653    345566666666


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ...|.++.|+++.+-+.+++...+..+++-.+............  ...-+.++|++|||.+.+||.|..+|.+.+|.+.
T Consensus       435 tt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~--n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  435 TTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTS--NTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             heeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCC--CCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            77899999999999777777777889999887654332222221  2345679999999999999999999999999864

>KOG0294|consensus

Probab=99.96  E-value=2.5e-27  Score=195.06  Aligned_cols=246  Identities=20%  Similarity=0.369  Sum_probs=199.9

Q ss_pred             eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC--EEEEecCCCc
Q psy17188        107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASN  182 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~  182 (504)
                      +..+ .|.+.|++++.+  +.++|+|+ |.+|+|||+....+...+     ..|.+.|+++.|.++-.  .|++|++||.
T Consensus        36 lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~l-----l~HagsitaL~F~~~~S~shLlS~sdDG~  108 (362)
T KOG0294|consen   36 LFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGIL-----LSHAGSITALKFYPPLSKSHLLSGSDDGH  108 (362)
T ss_pred             cccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcce-----eccccceEEEEecCCcchhheeeecCCCc
Confidence            4444 799999999997  88999999 999999999875433333     37899999999999765  8999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      |.+|+...  ......++.|...|+.++.+|.+++-++.+.|+.++.||+-+|+.-..++- ....+.+.|+|.|.+++.
T Consensus       109 i~iw~~~~--W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v  185 (362)
T KOG0294|consen  109 IIIWRVGS--WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVV  185 (362)
T ss_pred             EEEEEcCC--eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEE
Confidence            99999884  456888999999999999999999999999999999999999876665552 233345999999999888


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      ++.+ .|-+|.+++..+                +........+.++.|. ++..|++|..|+.|.+||....  .....+
T Consensus       186 ~~~~-~i~i~q~d~A~v----------------~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~--~~~~~~  245 (362)
T KOG0294|consen  186 SGRN-KIDIYQLDNASV----------------FREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSD--TPLTEF  245 (362)
T ss_pred             Eecc-EEEEEecccHhH----------------hhhhhccccceeeeec-CCceEEEecCCceEEEeccCCC--ccceee
Confidence            8765 588999887653                2222333456666665 4667999999999999999874  677788


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      ..|..+|..+.+.-+....++++.+.||.|++||++....
T Consensus       246 ~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k  285 (362)
T KOG0294|consen  246 LAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETK  285 (362)
T ss_pred             ecchhheeeeEEEecCCceEEEEeccCceEEEEEcccccc
Confidence            8999999999976555445999999999999999987543

>KOG0264|consensus

Probab=99.96  E-value=4e-28  Score=209.61  Aligned_cols=262  Identities=18%  Similarity=0.299  Sum_probs=211.6

Q ss_pred             cccceeeecCCCcEEEEEEcCCCcEEE-Eec-CCeEEEEeCCCCCCCCc-----eeeeeecCCCCceEEEEEcc-CCCEE
Q psy17188        103 HARQINTLSHGEVVCAVTISNPTKYVY-TGG-KGCVKVWDISQPGSKTP-----VSQLDCLQRDNYIRSVKLLP-DGRTL  174 (504)
Q Consensus       103 ~~~~~~~~~h~~~V~~v~~s~~~~~l~-~~~-d~~i~vw~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~-~~~~l  174 (504)
                      ..+..+.+.|.+.|+.+.+-|....|+ +.+ .+.|.|||.........     ...+.+.+|...=.+++|++ ..-.|
T Consensus       114 ~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~L  193 (422)
T KOG0264|consen  114 KVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTL  193 (422)
T ss_pred             ceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeE
Confidence            344555679999999999999765555 455 89999999865432221     22335557888778899999 44578


Q ss_pred             EEecCCCcEEEEeCCCCCc-----cceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCC
Q psy17188        175 IVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTD  246 (504)
Q Consensus       175 ~~~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~  246 (504)
                      ++++.|++|++||+.....     .....+.+|...|..++|++ +..++++++.|+.+.|||++  +.+......+|.+
T Consensus       194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~  273 (422)
T KOG0264|consen  194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSA  273 (422)
T ss_pred             eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCC
Confidence            9999999999999975432     34567889999999999999 45588899999999999999  5666777889999


Q ss_pred             CeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCC
Q psy17188        247 GASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEAS  324 (504)
Q Consensus       247 ~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg  324 (504)
                      .|.|++|+| ++..||+||.|++|++||+++-...              ......|...|..+.|+|. ...|++++.|+
T Consensus       274 ~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~--------------lh~~e~H~dev~~V~WSPh~etvLASSg~D~  339 (422)
T KOG0264|consen  274 EVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP--------------LHTFEGHEDEVFQVEWSPHNETVLASSGTDR  339 (422)
T ss_pred             ceeEEEeCCCCCceEEeccCCCcEEEeechhcccC--------------ceeccCCCcceEEEEeCCCCCceeEecccCC
Confidence            999999999 6678999999999999999986532              4556688999999999995 46788889999


Q ss_pred             cEEEEeCCCCC------------ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        325 NLSIWDLASPT------------PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       325 ~i~v~d~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .+.+||+..-.            +.....-.+|...|..+.|+|+..+ .+++.+.|+.++||+...
T Consensus       340 rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW-~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  340 RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPW-TIASVAEDNILQIWQMAE  405 (422)
T ss_pred             cEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCe-EEEEecCCceEEEeeccc
Confidence            99999986532            2234556788999999999999998 889999999999999763

>KOG0646|consensus

Probab=99.96  E-value=6.7e-28  Score=208.68  Aligned_cols=296  Identities=20%  Similarity=0.296  Sum_probs=224.2

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-CCCcEEEEeCCCCCccceeeeecCcCceEEEEE
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAI  211 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  211 (504)
                      ..++.+||+.++.....+..-.    ...-.++..- ++.+++++. ....|.+|.+.......  ...--.+.|.+++-
T Consensus        17 ~~~~~~~dl~TGt~~~~ykg~~----~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~--q~~v~Pg~v~al~s   89 (476)
T KOG0646|consen   17 PINCIVWDLRTGTSLLQYKGSY----LAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVV--QYIVLPGPVHALAS   89 (476)
T ss_pred             CcceeEEecCCCceeEEecCcc----cccchhhhhh-chhheeeecccCccccccccCchhhhh--hhcccccceeeeec
Confidence            3569999999975433332210    1111111111 346677664 34579999987543322  22334566999999


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        212 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       212 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                      +|+|.+|+.|+..|.|++|.+.+|.++..+.+|-..|+|+.|+.|+.+|+||+.||.|.+|.+..               
T Consensus        90 ~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~---------------  154 (476)
T KOG0646|consen   90 SNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD---------------  154 (476)
T ss_pred             CCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe---------------
Confidence            99999999998999999999999999999999999999999999999999999999999998642               


Q ss_pred             CcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                                               ++....++          ...+...+..|.-+|+.+...+.+....+++.+.|.+
T Consensus       155 -------------------------lv~a~~~~----------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t  199 (476)
T KOG0646|consen  155 -------------------------LVSADNDH----------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT  199 (476)
T ss_pred             -------------------------ecccccCC----------CccceeeeccCcceeEEEEecCCCccceEEEecCCce
Confidence                                     12222222          1244555666777888888888777778999999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc--------------ceeecccC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--------------RIKAELTS  437 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~  437 (504)
                      +++||+..+.....+      ..+..+.+++.+|-++.+++|+.+|.|.+.++.....              .....+.+
T Consensus       200 ~k~wdlS~g~LLlti------~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~G  273 (476)
T KOG0646|consen  200 IKLWDLSLGVLLLTI------TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVG  273 (476)
T ss_pred             EEEEEeccceeeEEE------ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeecc
Confidence            999999886433322      3466788999999999999999999999988754321              11223456


Q ss_pred             CCC--ceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        438 SAP--ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       438 ~~~--~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      |..  .|+|++++-||..|++|+.||.++|||+.+.++++++..-.++|+.+.+.|
T Consensus       274 h~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~  329 (476)
T KOG0646|consen  274 HENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP  329 (476)
T ss_pred             ccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence            666  999999999999999999999999999999999998886778999998855

>KOG1332|consensus

Probab=99.96  E-value=3.5e-28  Score=192.92  Aligned_cols=255  Identities=18%  Similarity=0.312  Sum_probs=211.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-cceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .|++.|..+...--|++||+++.|++|+|+..+.... ....++.+|.++|..++|..  -|.+|++++.||.|.||.-.
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~   88 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE   88 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecC
Confidence            6888899998888999999999999999999988765 67889999999999999965  78899999999999999988


Q ss_pred             CCe--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        234 NQT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       234 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      +++  .......|...|++++|.|.  |-.|++++.||.|.+.+.+....  |          ........|.-.+++++
T Consensus        89 ~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~--w----------~t~ki~~aH~~GvnsVs  156 (299)
T KOG1332|consen   89 NGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG--W----------TTSKIVFAHEIGVNSVS  156 (299)
T ss_pred             CCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC--c----------cchhhhhccccccceee
Confidence            774  34456679999999999995  55899999999999999876510  1          01233346777899999


Q ss_pred             EcCC---C-----------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC--CceeeeccCCCeEE
Q psy17188        310 LLPD---G-----------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK--SPFFSSHHYKSCVK  373 (504)
Q Consensus       310 ~~~~---~-----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~i~  373 (504)
                      |.|.   |           +.|++|+.|..++||+....+......+..|..-++.++|.|.-.  ...+++++.|+.+.
T Consensus       157 wapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~vi  236 (299)
T KOG1332|consen  157 WAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVI  236 (299)
T ss_pred             ecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEE
Confidence            9985   4           579999999999999999988888888999999999999999753  34799999999999


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ||..+.....-....+.  .-...+..+.||..|..|++++.|+.+.+|.-.
T Consensus       237 Iwt~~~e~e~wk~tll~--~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  237 IWTKDEEYEPWKKTLLE--EFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             EEEecCccCcccccccc--cCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            99987432222222222  245678999999999999999999999999754

>KOG0308|consensus

Probab=99.96  E-value=3.9e-28  Score=218.28  Aligned_cols=284  Identities=20%  Similarity=0.394  Sum_probs=229.3

Q ss_pred             EEEEc-CCCcEEEEec-CCeEEEEeCCCCCCCCce-eeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188        118 AVTIS-NPTKYVYTGG-KGCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  194 (504)
Q Consensus       118 ~v~~s-~~~~~l~~~~-d~~i~vw~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  194 (504)
                      ++..+ |.+++|.+|+ ||.|++|++......... .......|..+|+.+....+++.|++++.|-+|++|+......-
T Consensus        29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~  108 (735)
T KOG0308|consen   29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF  108 (735)
T ss_pred             hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence            44444 5678899888 999999998764332111 12233479999999999999999999999999999999876544


Q ss_pred             ceeeeecCcCceEEEEE-CCCCCEEEEEeCCCcEEEEECCCCe--EEEe--------ec-CCCCCeEEEEEccCCCEEEE
Q psy17188        195 IKAELTSSAPACYALAI-SPDSKVCFSCCSDGNIAVWDLHNQT--LVRQ--------FQ-GHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~--------~~-~h~~~v~~~~~~~~~~~l~s  262 (504)
                      ....+..|.+.|.|+++ -++..++|+|+-|+.|.+||+.++.  .+..        +. ++...|++++-++.|..|++
T Consensus       109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivs  188 (735)
T KOG0308|consen  109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVS  188 (735)
T ss_pred             hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEe
Confidence            56778899999999999 7788899999999999999999772  2222        23 78889999999999999999


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      |+..+.|++||.++++-               .....+|...|+.+..++||+.+++++.||+|++||+...  .....+
T Consensus       189 Ggtek~lr~wDprt~~k---------------imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T~  251 (735)
T KOG0308|consen  189 GGTEKDLRLWDPRTCKK---------------IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLATY  251 (735)
T ss_pred             cCcccceEEeccccccc---------------eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeeeE
Confidence            99999999999999863               5556699999999999999999999999999999999866  455557


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ..|...+.++..+|+-.  .+.+|+.|+.|..-|+++......+.     ..+.+|..+..+.+.+-+-+++.|+.|+-|
T Consensus       252 ~vH~e~VWaL~~~~sf~--~vYsG~rd~~i~~Tdl~n~~~~tlic-----k~daPv~~l~~~~~~~~~WvtTtds~I~rW  324 (735)
T KOG0308|consen  252 IVHKEGVWALQSSPSFT--HVYSGGRDGNIYRTDLRNPAKSTLIC-----KEDAPVLKLHLHEHDNSVWVTTTDSSIKRW  324 (735)
T ss_pred             EeccCceEEEeeCCCcc--eEEecCCCCcEEecccCCchhheEee-----cCCCchhhhhhccccCCceeeeccccceec
Confidence            77888899999998888  79999999999999998753222221     234556677776555555777789999999


Q ss_pred             eCC
Q psy17188        423 DLA  425 (504)
Q Consensus       423 d~~  425 (504)
                      ...
T Consensus       325 ~~~  327 (735)
T KOG0308|consen  325 KLE  327 (735)
T ss_pred             CCc
Confidence            764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.96  E-value=7.2e-26  Score=206.59  Aligned_cols=293  Identities=15%  Similarity=0.173  Sum_probs=209.8

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      ++.+++++.|+.|++||+.+++.  ...+..+. .+.+++|+|+++.+ ++++.++.|++||+.+++.+..+..+.. +.
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~--~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~   76 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEV--TRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PE   76 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCce--EEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-cc
Confidence            35688889999999999987653  34444443 36789999999876 5667889999999999988877765443 56


Q ss_pred             EEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-cEE
Q psy17188        250 CIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLS  327 (504)
Q Consensus       250 ~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~  327 (504)
                      .++|+|+++.++++ +.|+.+++||+++++..                ........+.+++|+|++++++++..++ .+.
T Consensus        77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~----------------~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~  140 (300)
T TIGR03866        77 LFALHPNGKILYIANEDDNLVTVIDIETRKVL----------------AEIPVGVEPEGMAVSPDGKIVVNTSETTNMAH  140 (300)
T ss_pred             EEEECCCCCEEEEEcCCCCeEEEEECCCCeEE----------------eEeeCCCCcceEEECCCCCEEEEEecCCCeEE
Confidence            78999999877654 56899999999886531                1112223467899999999999988765 467


Q ss_pred             EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc--ccCCCceEEEEEcC
Q psy17188        328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLP  405 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~  405 (504)
                      +||.++.+...  ... .......++|+++++. +++++..++.+.+||++.......+.....  .........++|+|
T Consensus       141 ~~d~~~~~~~~--~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~  216 (300)
T TIGR03866       141 FIDTKTYEIVD--NVL-VDQRPRFAEFTADGKE-LWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTK  216 (300)
T ss_pred             EEeCCCCeEEE--EEE-cCCCccEEEECCCCCE-EEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECC
Confidence            78987653322  111 1234577899999884 445666789999999987643322211000  00111234688999


Q ss_pred             CCCEEEEe-eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe-eCCCcEEEEEcCCcceEEEEeecCCc
Q psy17188        406 DGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDG  483 (504)
Q Consensus       406 ~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~h~~~  483 (504)
                      ++++++++ ..++.+.+||.++++......   +...+.+++|+|++++|+++ ..++.|++||+.+++++.+++.. ..
T Consensus       217 dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~  292 (300)
T TIGR03866       217 DGKTAFVALGPANRVAVVDAKTYEVLDYLL---VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RL  292 (300)
T ss_pred             CCCEEEEEcCCCCeEEEEECCCCcEEEEEE---eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cc
Confidence            99986554 456789999998765443322   23358889999999999876 46899999999999999999854 56


Q ss_pred             eEEEEEcc
Q psy17188        484 ASCIDISA  491 (504)
Q Consensus       484 v~~~~~s~  491 (504)
                      .+.++++|
T Consensus       293 ~~~~~~~~  300 (300)
T TIGR03866       293 PWGVVVRP  300 (300)
T ss_pred             cceeEeCC
Confidence            68888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0301|consensus

Probab=99.96  E-value=4.4e-27  Score=213.14  Aligned_cols=277  Identities=18%  Similarity=0.324  Sum_probs=231.1

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEE-EEECC-CCCEEEEEeCCCcEEEEEC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA-LAISP-DSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~-~~~s~-~~~~l~~~~~dg~i~iwd~  232 (504)
                      ..+|+..|..+++.+. ..+++++.||++++|+-...+......+.+|.+.|.. +++-+ ++-.|++|+.|.+|.+|.+
T Consensus        10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~   88 (745)
T KOG0301|consen   10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKL   88 (745)
T ss_pred             eccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEec
Confidence            3489999988887754 4799999999999999877666555667778777776 78875 4446999999999999999


Q ss_pred             CCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        233 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       233 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                      .+..+...+++|...|.+++...++. +++||.|.++++|....-                 .....+|...|.+++.-|
T Consensus        89 ~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l-----------------~~~l~gH~asVWAv~~l~  150 (745)
T KOG0301|consen   89 SQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGEL-----------------VYSLQGHTASVWAVASLP  150 (745)
T ss_pred             CCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchhh-----------------hcccCCcchheeeeeecC
Confidence            99999999999999999999888886 999999999999987654                 233678999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc
Q psy17188        313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL  392 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  392 (504)
                      ++ .+++|+.|.+|++|.-.    .....+.+|...|+.+++-+++.   |++++.||.|+.|++...      ......
T Consensus       151 e~-~~vTgsaDKtIklWk~~----~~l~tf~gHtD~VRgL~vl~~~~---flScsNDg~Ir~w~~~ge------~l~~~~  216 (745)
T KOG0301|consen  151 EN-TYVTGSADKTIKLWKGG----TLLKTFSGHTDCVRGLAVLDDSH---FLSCSNDGSIRLWDLDGE------VLLEMH  216 (745)
T ss_pred             CC-cEEeccCcceeeeccCC----chhhhhccchhheeeeEEecCCC---eEeecCCceEEEEeccCc------eeeeee
Confidence            88 79999999999999863    45667888999999999999985   899999999999999542      234455


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .|...+.++....++..++++++|++++||+..  +..  ....-....|+++.+-++|. +++|+.||.||||...
T Consensus       217 ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~--q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  217 GHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECV--QVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             ccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceE--EEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence            789999999988888999999999999999977  333  33333445688888888876 5678899999999765

>KOG4283|consensus

Probab=99.96  E-value=5.6e-27  Score=191.18  Aligned_cols=293  Identities=20%  Similarity=0.321  Sum_probs=215.9

Q ss_pred             cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCC----------ceeeeeecCCCCceEEEEEcc-CCCEEEEe
Q psy17188        111 SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKT----------PVSQLDCLQRDNYIRSVKLLP-DGRTLIVG  177 (504)
Q Consensus       111 ~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~----------~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~  177 (504)
                      .|.+.|.++.+.+ .|+++++|+ ||.|.|||++......          .+......+|+-.|.++.|-| |...+.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            5889999999997 789999998 9999999998643111          011112235778899999999 77788899


Q ss_pred             cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC---CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188        178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~  254 (504)
                      +.|.++++||..+.+....+.   .++.|+.-+++|-   .-++++|..|-.|++.|+.+|..-+++.+|...|.++.|+
T Consensus       121 SFDhtlKVWDtnTlQ~a~~F~---me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Ws  197 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAVDFK---MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWS  197 (397)
T ss_pred             cccceEEEeecccceeeEEee---cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEec
Confidence            999999999998766433333   3455888888883   3378888888999999999999999999999999999999


Q ss_pred             cCCC-EEEEEcCCCeEEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        255 ADGT-KLWTGGLDNTVRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       255 ~~~~-~l~s~~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      |... .|++|+.||.|++||++..  .....+....  +.+........|.+.+..++|+.++.++++.+.|..+++|+.
T Consensus       198 p~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~--k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~  275 (397)
T KOG4283|consen  198 PSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT--KRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM  275 (397)
T ss_pred             cCceeEEEecCCCceEEEEEeecccceeEEeecccC--ccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence            9766 5789999999999999864  4444444332  111112235678899999999999999999999999999999


Q ss_pred             CCCCccceeeecc-C-----------CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceE
Q psy17188        332 ASPTPRIKAELTS-S-----------APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR  399 (504)
Q Consensus       332 ~~~~~~~~~~~~~-~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~  399 (504)
                      .+++.......+. +           ...-..+.+.|.+..+.+.+......|+.|+.                |...+.
T Consensus       276 ~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~----------------h~k~i~  339 (397)
T KOG4283|consen  276 ESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLST----------------HLKRIN  339 (397)
T ss_pred             ccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeec----------------ccceee
Confidence            8775322211110 0           00111122334444444555555555666553                345677


Q ss_pred             EEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        400 SVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       400 ~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      +.++.|+=+...+|..|+.|..|-.
T Consensus       340 c~~~~~~fq~~~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  340 CAAYRPDFEQCFTGDMNGNIYMWSP  364 (397)
T ss_pred             EEeecCchhhhhccccCCccccccc
Confidence            9999999889999999999999976

>KOG4283|consensus

Probab=99.96  E-value=1.3e-26  Score=189.14  Aligned_cols=293  Identities=19%  Similarity=0.312  Sum_probs=227.4

Q ss_pred             CCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCcc-------------ceeeeecCcCceEEEEECC-CCCEEEEE
Q psy17188        157 QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPR-------------IKAELTSSAPACYALAISP-DSKVCFSC  221 (504)
Q Consensus       157 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~-------------~~~~~~~~~~~v~~~~~s~-~~~~l~~~  221 (504)
                      .|.+.|+++...+ .|+++++|+.||.|.+||++.....             ......+|.-.|..+.|-| |...+.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            5789999999988 7999999999999999999764310             1112346778899999999 55688899


Q ss_pred             eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc---CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA---DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      +.|.++++||..+-+....|+ .++.|.+-+++|   ...++++|..|-.|++-|+.+|..               ....
T Consensus       121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~---------------sH~L  184 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF---------------SHTL  184 (397)
T ss_pred             cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc---------------eeee
Confidence            999999999999999888888 778899999998   244788888899999999999986               5566


Q ss_pred             cccCCceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        299 LQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      .+|.+.|.++.|+|...+ |++|+.||.|++||++..                                  .|+.++.|.
T Consensus       185 sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra----------------------------------sgcf~~lD~  230 (397)
T KOG4283|consen  185 SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA----------------------------------SGCFRVLDQ  230 (397)
T ss_pred             ccccCceEEEEeccCceeEEEecCCCceEEEEEeecc----------------------------------cceeEEeec
Confidence            789999999999997766 678899999999999864                                  234455555


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-CCCC----ceeEEEECCCCC
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAP----ACYALAISPDSK  452 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~----~v~~l~~s~~~~  452 (504)
                      .+......++  ....|.+.++.++|+.++.++++.+.|..+++|+..+++.......+ .+..    .+. +. +.+..
T Consensus       231 hn~k~~p~~~--~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~  306 (397)
T KOG4283|consen  231 HNTKRPPILK--TNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSD  306 (397)
T ss_pred             ccCccCcccc--ccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEE-Ee-ecccc
Confidence            4432222221  34568889999999999999999999999999999877543322111 1111    111 22 33444


Q ss_pred             EEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        453 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       453 ~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .++---.++.+.++++-++..+..+..|-..|.+..+-|+=+.+.+++.|+
T Consensus       307 vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~  357 (397)
T KOG4283|consen  307 VFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNG  357 (397)
T ss_pred             eEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCC
Confidence            444444568899999999999999999988999999999988888888776

>KOG0264|consensus

Probab=99.96  E-value=5.6e-27  Score=202.57  Aligned_cols=260  Identities=17%  Similarity=0.297  Sum_probs=209.8

Q ss_pred             eeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCC--------ccceeeeecCcCceEEEEECCCCC-EEEE
Q psy17188        151 SQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPT--------PRIKAELTSSAPACYALAISPDSK-VCFS  220 (504)
Q Consensus       151 ~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~  220 (504)
                      .......|.+.|+.+...|. ...+|+.+..+.|.|||.....        ......+.+|...-++++|++... .|++
T Consensus       116 ~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls  195 (422)
T KOG0264|consen  116 EISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLS  195 (422)
T ss_pred             EEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEee
Confidence            33344579999999999995 5566777889999999986432        234457889998888999998544 8999


Q ss_pred             EeCCCcEEEEECCCCe-------EEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188        221 CCSDGNIAVWDLHNQT-------LVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP  292 (504)
Q Consensus       221 ~~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~  292 (504)
                      ++.|+.|++||+....       ....+.+|...|..++|++ +..++++++.|+.+.|||++++..+            
T Consensus       196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~------------  263 (422)
T KOG0264|consen  196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSK------------  263 (422)
T ss_pred             ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCC------------
Confidence            9999999999997542       3456789999999999999 5568899999999999999963211            


Q ss_pred             cccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        293 VSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                       .......|...+.+++|+| ++..|++|+.|++|.+||+++... ....+..|...|..+.|+|.... ++++++.|+.
T Consensus       264 -~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~-~lh~~e~H~dev~~V~WSPh~et-vLASSg~D~r  340 (422)
T KOG0264|consen  264 -PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK-PLHTFEGHEDEVFQVEWSPHNET-VLASSGTDRR  340 (422)
T ss_pred             -CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc-CceeccCCCcceEEEEeCCCCCc-eeEecccCCc
Confidence             1445567899999999999 667788999999999999998764 77888999999999999999887 8888889999


Q ss_pred             EEEEecCCCCCCCc---------ccccccccCCCceEEEEEcCCCCE-EEEeeCCCcEEEeeCC
Q psy17188        372 VKVWDISQPGSKTP---------VSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLA  425 (504)
Q Consensus       372 i~i~d~~~~~~~~~---------~~~~~~~~~~~~i~~~~~s~~g~~-l~~~~~dg~i~iwd~~  425 (504)
                      +.+||+..-+....         ...+...+|...|..+.|+|+..+ |++.++|+.+.||...
T Consensus       341 l~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  341 LNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             EEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            99999976544322         112334468888999999998775 5677889999999876

>KOG2055|consensus

Probab=99.96  E-value=1.6e-26  Score=199.74  Aligned_cols=293  Identities=15%  Similarity=0.209  Sum_probs=229.4

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~  236 (504)
                      ..+.|+++.|+|....|++++.|++++||.++.........+.-...+|.+.+|.|+|. .+++++....++.||+.+.+
T Consensus       212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak  291 (514)
T KOG2055|consen  212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK  291 (514)
T ss_pred             CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence            35789999999999999999999999999998766666666667778899999999999 88999999999999999876


Q ss_pred             EEE--eecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        237 LVR--QFQGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       237 ~~~--~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      ...  ...++. ..+.....++++++|+..+..|.|.+....+++                .+......+.+..++|+.+
T Consensus       292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~e----------------li~s~KieG~v~~~~fsSd  355 (514)
T KOG2055|consen  292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKE----------------LITSFKIEGVVSDFTFSSD  355 (514)
T ss_pred             cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhh----------------hhheeeeccEEeeEEEecC
Confidence            543  333443 356778889999999999999999999999887                4445566788999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-CCcccccccc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCL  392 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~  392 (504)
                      ++.|++.+.+|.|.+||++.........-.+ .-.-++++.++++.  ++++|+..|.|.|||...... ..+.......
T Consensus       356 sk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G-~v~gts~~~S~ng~--ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~d  432 (514)
T KOG2055|consen  356 SKELLASGGTGEVYVWNLRQNSCLHRFVDDG-SVHGTSLCISLNGS--YLATGSDSGIVNIYDGNSCFASTNPKPIKTVD  432 (514)
T ss_pred             CcEEEEEcCCceEEEEecCCcceEEEEeecC-ccceeeeeecCCCc--eEEeccCcceEEEeccchhhccCCCCchhhhh
Confidence            9999999999999999999874333333222 22456777788888  899999999999999654321 1111122223


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeC--CCcEEEeeCCCCCcceeec-ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .-...|+++.|++|.+.||.++.  +..+++-.+.+.....-+. .......|+|++|+|.+.+||.|..+|.+.+|.+.
T Consensus       433 NLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  433 NLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             hhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            34567999999999999998875  5568888776543221111 12344568999999999999999999999999874

>KOG0301|consensus

Probab=99.96  E-value=1.5e-26  Score=209.79  Aligned_cols=277  Identities=20%  Similarity=0.380  Sum_probs=222.9

Q ss_pred             eee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEE-EEEcc-CCCEEEEecCCCcE
Q psy17188        108 NTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLP-DGRTLIVGGEASNL  183 (504)
Q Consensus       108 ~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~-~~~~l~~~~~dg~i  183 (504)
                      +.+ +|+..|..+++.+.. .+++++ |+++++|+-...+   .+......+|.+.|.+ +++.+ ++-.|++|+.|..|
T Consensus         8 ~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~---~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i   83 (745)
T KOG0301|consen    8 HELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQ---YLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTI   83 (745)
T ss_pred             EEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcc---cccceecccCcceeeccceeccccCcceEeecccceE
Confidence            344 899999999987766 455555 9999999975532   2222334467888887 88886 55569999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      .+|......  ....+.+|...|.++....++. +++||.|.++++|..  +++...+++|+..|.++...|++ .++||
T Consensus        84 ~v~~~~~~~--P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTg  157 (745)
T KOG0301|consen   84 IVFKLSQAE--PLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTG  157 (745)
T ss_pred             EEEecCCCC--chhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEec
Confidence            999998655  4788999999999999887776 999999999999965  56667799999999999999988 89999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      |.|.+|++|.-.+-                 .....+|.+.|+.+++-+++. +++++.||.|++|++..   ....+..
T Consensus       158 saDKtIklWk~~~~-----------------l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~~g---e~l~~~~  216 (745)
T KOG0301|consen  158 SADKTIKLWKGGTL-----------------LKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDLDG---EVLLEMH  216 (745)
T ss_pred             cCcceeeeccCCch-----------------hhhhccchhheeeeEEecCCC-eEeecCCceEEEEeccC---ceeeeee
Confidence            99999999986432                 344567999999999998765 77888999999999943   5677888


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC-CCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      +|..-+.+++...+++  .+++++.|++++||+...-        .....+ ...|.++.+-++|. +++|+.||.|+||
T Consensus       217 ghtn~vYsis~~~~~~--~Ivs~gEDrtlriW~~~e~--------~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVf  285 (745)
T KOG0301|consen  217 GHTNFVYSISMALSDG--LIVSTGEDRTLRIWKKDEC--------VQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVF  285 (745)
T ss_pred             ccceEEEEEEecCCCC--eEEEecCCceEEEeecCce--------EEEEecCccceEEEEEeeCCC-EEEeccCceEEEE
Confidence            9999999999777776  8999999999999997621        111122 33688888888886 7888999999999


Q ss_pred             eCCC
Q psy17188        423 DLAS  426 (504)
Q Consensus       423 d~~~  426 (504)
                      ....
T Consensus       286 T~~k  289 (745)
T KOG0301|consen  286 TVDK  289 (745)
T ss_pred             Eecc
Confidence            8763

>KOG1273|consensus

Probab=99.96  E-value=3.3e-26  Score=188.45  Aligned_cols=289  Identities=16%  Similarity=0.215  Sum_probs=215.8

Q ss_pred             eEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      -.|+.|++.|.+||+|+.||.|.|||+.+..  ....+.+|..+|++++||+||+.|++++.|..|.+||+..|.+++.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            7899999999999999999999999999755  46678899999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        242 QGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      + ..++|....|+|. .+..++.-.+..-.+.++......+......+           .......+..|.+.|+++++|
T Consensus       104 r-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~-----------dln~sas~~~fdr~g~yIitG  171 (405)
T KOG1273|consen  104 R-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDG-----------DLNSSASHGVFDRRGKYIITG  171 (405)
T ss_pred             E-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcc-----------ccccccccccccCCCCEEEEe
Confidence            8 8899999999993 33444443444455555554433222111111           111112334688999999999


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC------CCCCcccccccccC
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP------GSKTPVSQLDCLQR  394 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~~~  394 (504)
                      ...|.+.++|..+.+......... ...|..+.++..++  +++..+.|..||.|+++.-      ....+...+...-.
T Consensus       172 tsKGkllv~~a~t~e~vas~rits-~~~IK~I~~s~~g~--~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVN  248 (405)
T KOG1273|consen  172 TSKGKLLVYDAETLECVASFRITS-VQAIKQIIVSRKGR--FLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVN  248 (405)
T ss_pred             cCcceEEEEecchheeeeeeeech-heeeeEEEEeccCc--EEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHh
Confidence            999999999999875544444433 35788999999998  7899999999999998732      11222222222223


Q ss_pred             CCceEEEEEcCCCCEEEEeeCC-CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ...-.+++|+.+|.|++.++.. ..++||....+..+....... ......+.|+|-...+++- ..|.++||...
T Consensus       249 k~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k-gE~l~DV~whp~rp~i~si-~sg~v~iw~~~  322 (405)
T KOG1273|consen  249 KLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK-GEELLDVNWHPVRPIIASI-ASGVVYIWAVV  322 (405)
T ss_pred             hhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCc-hhheeecccccceeeeeec-cCCceEEEEee
Confidence            4455689999999999888743 459999999887665543322 2456778999988888877 78899999764

>KOG0639|consensus

Probab=99.96  E-value=4.1e-27  Score=205.48  Aligned_cols=287  Identities=17%  Similarity=0.333  Sum_probs=233.7

Q ss_pred             eeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc-cee--eeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        152 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-IKA--ELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+....|..-|.++.+|...+++.+|+. |.|+|||+.....+ ...  ........|.++...|||+.|++|+.-.++.
T Consensus       412 q~~tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastls  490 (705)
T KOG0639|consen  412 QINTLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLS  490 (705)
T ss_pred             hhhhhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceee
Confidence            3444568888999999999999999974 88999999754321 122  2223456688999999999999999999999


Q ss_pred             EEECCCCeEE--EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        229 VWDLHNQTLV--RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       229 iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      |||+......  ..+....-....++.+||.+..+++..||.|.|||+.+..+               .....+|.+.+.
T Consensus       491 iWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~---------------VrqfqGhtDGas  555 (705)
T KOG0639|consen  491 IWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL---------------VRQFQGHTDGAS  555 (705)
T ss_pred             eeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccccee---------------eecccCCCCCce
Confidence            9999876543  33333334577889999999999999999999999998764               556678999999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV  386 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~  386 (504)
                      |+.++++|..|.+|+-|.+++.||++++.......+   ...|.++..+|.+.  +++.|-.++.+.+.......     
T Consensus       556 cIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF---~SQIfSLg~cP~~d--WlavGMens~vevlh~skp~-----  625 (705)
T KOG0639|consen  556 CIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF---SSQIFSLGYCPTGD--WLAVGMENSNVEVLHTSKPE-----  625 (705)
T ss_pred             eEEecCCCceeecCCCccceeehhhhhhhhhhhhhh---hhhheecccCCCcc--ceeeecccCcEEEEecCCcc-----
Confidence            999999999999999999999999998765544444   34899999999999  78999999999888766532     


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                       ......|+..|.++.|.+.|+++++.+.|+.+..|....+..+....   ....|.++.+|.|.+++++|+.|....||
T Consensus       626 -kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk---E~SsVlsCDIS~ddkyIVTGSGdkkATVY  701 (705)
T KOG0639|consen  626 -KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISFDDKYIVTGSGDKKATVY  701 (705)
T ss_pred             -ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeecc---ccCcceeeeeccCceEEEecCCCcceEEE
Confidence             23344688899999999999999999999999999988776554432   35579999999999999999999988888


Q ss_pred             Ec
Q psy17188        467 DL  468 (504)
Q Consensus       467 d~  468 (504)
                      .+
T Consensus       702 eV  703 (705)
T KOG0639|consen  702 EV  703 (705)
T ss_pred             EE
Confidence            75

>KOG1274|consensus

Probab=99.95  E-value=6.8e-26  Score=211.96  Aligned_cols=277  Identities=16%  Similarity=0.206  Sum_probs=222.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .|....+.++|.|+|++|++++.||.|++|+.......... +.-+...|.+++.  ++.+|++++.+++|.+|...+++
T Consensus        11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~t-i~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~~   87 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPET-IDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSGE   87 (933)
T ss_pred             hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCch-hhccCceeEEEee--cccceEEeeccceEEEeeCCCCC
Confidence            68888999999999999999999999999998765222221 2226666777776  44589999999999999999988


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .-..+...+-++.+++++.+|++++.||.|-.|++.++.....               .....+|..+|.++.|+|++++
T Consensus        88 ~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~---------------~~~lrgh~apVl~l~~~p~~~f  152 (933)
T KOG1274|consen   88 EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ---------------EKVLRGHDAPVLQLSYDPKGNF  152 (933)
T ss_pred             ccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccch---------------heeecccCCceeeeeEcCCCCE
Confidence            7766766778999999999999999999999999999887653               5666789999999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      |++.+-||.+++||+.++....  .+..                          .....+.               ....
T Consensus       153 LAvss~dG~v~iw~~~~~~~~~--tl~~--------------------------v~k~n~~---------------~~s~  189 (933)
T KOG1274|consen  153 LAVSSCDGKVQIWDLQDGILSK--TLTG--------------------------VDKDNEF---------------ILSR  189 (933)
T ss_pred             EEEEecCceEEEEEcccchhhh--hccc--------------------------CCccccc---------------cccc
Confidence            9999999999999998763221  1111                          0000000               0123


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      .+..++|+|+|..+++...|+.|++|+..+++.........+...+..++|+|+|+|||+++.||.|.|||+++-+.   
T Consensus       190 i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~---  266 (933)
T KOG1274|consen  190 ICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER---  266 (933)
T ss_pred             eeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh---
Confidence            35589999998888888999999999999998888877777777799999999999999999999999999998222   


Q ss_pred             EeecCCceEEEEEccCCCEEEE
Q psy17188        477 FQGHTDGASCIDISADGTKLWT  498 (504)
Q Consensus       477 ~~~h~~~v~~~~~s~d~~~l~s  498 (504)
                       ......|.+++|.|+.+.|-.
T Consensus       267 -~~~~~~Vc~~aw~p~~n~it~  287 (933)
T KOG1274|consen  267 -HEFKRAVCCEAWKPNANAITL  287 (933)
T ss_pred             -ccccceeEEEecCCCCCeeEE
Confidence             233567999999998776543

>KOG1274|consensus

Probab=99.95  E-value=9.9e-26  Score=210.87  Aligned_cols=286  Identities=15%  Similarity=0.243  Sum_probs=227.4

Q ss_pred             eecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCC-CCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEE
Q psy17188        109 TLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPG-SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  186 (504)
Q Consensus       109 ~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  186 (504)
                      +..|...-+.++|.|+|.+|.+++ ||.|++|+..... ....+.     .+...|.+++.  ++.+|++++.+++|.+|
T Consensus         9 Ryaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~-----~~g~~v~~ia~--~s~~f~~~s~~~tv~~y   81 (933)
T KOG1274|consen    9 RYAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETID-----ISGELVSSIAC--YSNHFLTGSEQNTVLRY   81 (933)
T ss_pred             hhhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhh-----ccCceeEEEee--cccceEEeeccceEEEe
Confidence            347889999999999999999888 9999999976652 222221     15666777766  45589999999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      .+.+++..  ..+....-++.+++|+-+|++++.|+.|-.|++.++.+......+++|.++|.++.|+|++++||+.+.|
T Consensus        82 ~fps~~~~--~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~d  159 (933)
T KOG1274|consen   82 KFPSGEED--TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCD  159 (933)
T ss_pred             eCCCCCcc--ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecC
Confidence            99977653  3445556679999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |.|++||+.++.+...-..       +...........+..++|+|++..+++...|+.|++|+....+.........+.
T Consensus       160 G~v~iw~~~~~~~~~tl~~-------v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~s  232 (933)
T KOG1274|consen  160 GKVQIWDLQDGILSKTLTG-------VDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSS  232 (933)
T ss_pred             ceEEEEEcccchhhhhccc-------CCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccc
Confidence            9999999998865321000       000011111445678999999888888889999999999988777777777777


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  421 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i  421 (504)
                      ..+..++|+|+|+  +++++..+|.|.|||.++...         +.....|++++|-|+...+-.....|...+
T Consensus       233 s~~~~~~wsPnG~--YiAAs~~~g~I~vWnv~t~~~---------~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~  296 (933)
T KOG1274|consen  233 SKFSDLQWSPNGK--YIAASTLDGQILVWNVDTHER---------HEFKRAVCCEAWKPNANAITLITALGTLGV  296 (933)
T ss_pred             cceEEEEEcCCCc--EEeeeccCCcEEEEecccchh---------ccccceeEEEecCCCCCeeEEEeecccccc
Confidence            7799999999999  899999999999999986221         234567899999998876655544444333

>KOG0269|consensus

Probab=99.95  E-value=1.2e-26  Score=212.96  Aligned_cols=293  Identities=14%  Similarity=0.271  Sum_probs=229.5

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC---CCCceEEEEEcc-CCCEEEEecCCCcEEEEeCC
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ---RDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~  189 (504)
                      ....+|...++-.-|+.++...++||.+........... ....   ..-.+..+.|.. +.++||+++..|.|.+||+.
T Consensus        40 ~~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~~~~~-~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdln  118 (839)
T KOG0269|consen   40 AKANAISVNRDINQIVVAGRSLLKLYAINPNDFSEKCNH-RFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLN  118 (839)
T ss_pred             cccceEeecCCcceeEEecccceeeEeeCcccCCcceee-ecccccceeeehhhcccccchhhhheeecCCCcEEEEecC
Confidence            455677788888888888888899998876433322221 1111   123355677876 67899999999999999998


Q ss_pred             CC-CccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCC
Q psy17188        190 SP-TPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLD  266 (504)
Q Consensus       190 ~~-~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d  266 (504)
                      .. .......+..|+..+.++.|++ ...+|++|+.||+|++||++..+...++.+....|..+.|+| .+..++++...
T Consensus       119 k~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds  198 (839)
T KOG0269|consen  119 KSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS  198 (839)
T ss_pred             ccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC
Confidence            52 2334557889999999999998 456999999999999999999999999999999999999999 67799999999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |.+++||++.-..              .......|.++|.++.|+|++.+|++|++|+.|+|||..+.+......+.. .
T Consensus       199 G~lqlWDlRqp~r--------------~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInT-i  263 (839)
T KOG0269|consen  199 GYLQLWDLRQPDR--------------CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINT-I  263 (839)
T ss_pred             ceEEEeeccCchh--------------HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEee-c
Confidence            9999999997542              155667899999999999999999999999999999999876555555543 3


Q ss_pred             CceeeEEECCCCCCceeeecc--CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEee
Q psy17188        347 PACYALAISPDSKSPFFSSHH--YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd  423 (504)
                      .++..+.|-|+... .+++++  .|-.|++||++.+-    +.......|...++.++|.. |...+.+++.||.+..-.
T Consensus       264 apv~rVkWRP~~~~-hLAtcsmv~dtsV~VWDvrRPY----IP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~  338 (839)
T KOG0269|consen  264 APVGRVKWRPARSY-HLATCSMVVDTSVHVWDVRRPY----IPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHL  338 (839)
T ss_pred             ceeeeeeeccCccc-hhhhhhccccceEEEEeecccc----ccceeeeccCccccceeccCCCceeeEeecCccHHHHhh
Confidence            48999999999886 555554  47789999998642    33334456888899999976 455788888999876665


Q ss_pred             CCCC
Q psy17188        424 LASP  427 (504)
Q Consensus       424 ~~~~  427 (504)
                      +++.
T Consensus       339 ~kna  342 (839)
T KOG0269|consen  339 FKNA  342 (839)
T ss_pred             hhcc
Confidence            5543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.95  E-value=1.1e-24  Score=198.77  Aligned_cols=288  Identities=17%  Similarity=0.214  Sum_probs=201.3

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCCCCCccceeeeecCc
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSA  203 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  203 (504)
                      +++++++ |+.|++||+.+++.   +..+.  . ...+.+++|+|+++.+ ++++.++.|++||..+++.  ...+..+.
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~---~~~~~--~-~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~~   73 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEV---TRTFP--V-GQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEV--IGTLPSGP   73 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCce---EEEEE--C-CCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcE--EEeccCCC
Confidence            4566666 99999999987532   22222  2 2346789999999977 5667889999999987653  22333333


Q ss_pred             CceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC-eEEEEECCCCceEE
Q psy17188        204 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN-TVRSWDLREGCVKV  281 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~~wd~~~~~~~~  281 (504)
                      . +..++|+|+++.++++ ..++.|++||+.+++.+..+. +...+.+++|+|+++++++++.++ .+.+||.++++...
T Consensus        74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~  151 (300)
T TIGR03866        74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD  151 (300)
T ss_pred             C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence            3 5678999999877655 568999999999988887776 334568899999999999888775 56778988765321


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeecc-----CCCceeeEEEC
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTS-----SAPACYALAIS  355 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~-----~~~~i~~~~~~  355 (504)
                                      .......+..++|+|++++|++++ .++.+++||+++.+.........     .......++++
T Consensus       152 ----------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  215 (300)
T TIGR03866       152 ----------------NVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLT  215 (300)
T ss_pred             ----------------EEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEEC
Confidence                            111223456789999999886554 58999999998875333222211     11123568899


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCcceeec
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~  434 (504)
                      |+++. ++++...++.+.+||.++.....   .   ..+...+.+++|+|+|++|+++ ..++.|.+||+++++.+....
T Consensus       216 ~dg~~-~~~~~~~~~~i~v~d~~~~~~~~---~---~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~  288 (300)
T TIGR03866       216 KDGKT-AFVALGPANRVAVVDAKTYEVLD---Y---LLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK  288 (300)
T ss_pred             CCCCE-EEEEcCCCCeEEEEECCCCcEEE---E---EEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence            99985 34444556789999987543211   1   1234468899999999999886 458999999999887665555


Q ss_pred             ccCCCCceeEEEECC
Q psy17188        435 LTSSAPACYALAISP  449 (504)
Q Consensus       435 ~~~~~~~v~~l~~s~  449 (504)
                      ..   ...+.++++|
T Consensus       289 ~~---~~~~~~~~~~  300 (300)
T TIGR03866       289 VG---RLPWGVVVRP  300 (300)
T ss_pred             cc---cccceeEeCC
Confidence            43   3346667764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0269|consensus

Probab=99.95  E-value=1.5e-26  Score=212.20  Aligned_cols=279  Identities=23%  Similarity=0.409  Sum_probs=210.6

Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee--c---CcCceEEEEECC-CCCEEEEEeCCCcEEEEEC
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--S---SAPACYALAISP-DSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~---~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~  232 (504)
                      +....+|...++-..|+.++. ..+.||.+..........+.  .   -...+..+.|.. +.++|++++..|.|.+||+
T Consensus        39 k~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdl  117 (839)
T KOG0269|consen   39 KAKANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDL  117 (839)
T ss_pred             ccccceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEec
Confidence            455677888888888888864 57888887654433222222  1   112245677775 5679999999999999999


Q ss_pred             CC---CeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        233 HN---QTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       233 ~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      ..   .+.+..|..|+..+++++|++ ..++|++|+.||+|++||++...-               ..........|+.+
T Consensus       118 nk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S---------------~~t~~~nSESiRDV  182 (839)
T KOG0269|consen  118 NKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS---------------KSTFRSNSESIRDV  182 (839)
T ss_pred             CccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc---------------cccccccchhhhce
Confidence            87   667778899999999999998 567999999999999999998753               22233456678888


Q ss_pred             EEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        309 KLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       309 ~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      .|+| .+..++++.+.|.+++||++....                                                  .
T Consensus       183 ~fsp~~~~~F~s~~dsG~lqlWDlRqp~r--------------------------------------------------~  212 (839)
T KOG0269|consen  183 KFSPGYGNKFASIHDSGYLQLWDLRQPDR--------------------------------------------------C  212 (839)
T ss_pred             eeccCCCceEEEecCCceEEEeeccCchh--------------------------------------------------H
Confidence            8888 556677777777777777765421                                                  1


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE-EEEee--CCCcEE
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSCC--SDGNIA  464 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~-l~s~~--~dg~i~  464 (504)
                      ......|.++|.++.|+|++.+||+|+.|+.|+|||..+.+........ ...+|.++.|-|+..+ ||+++  .|-.|+
T Consensus       213 ~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~  291 (839)
T KOG0269|consen  213 EKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVH  291 (839)
T ss_pred             HHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEE
Confidence            2233468889999999999999999999999999999876654444333 3557899999997765 55554  378899


Q ss_pred             EEEcCCcc-eEEEEeecCCceEEEEEcc-CCCEEEEecCCCC
Q psy17188        465 VWDLHNQT-LVRQFQGHTDGASCIDISA-DGTKLWTGGLDNT  504 (504)
Q Consensus       465 iwd~~~~~-~~~~~~~h~~~v~~~~~s~-d~~~l~s~s~Dgt  504 (504)
                      |||+...- +-.++..|.+.++.++|-. |-..|.+++.|||
T Consensus       292 VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~t  333 (839)
T KOG0269|consen  292 VWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGT  333 (839)
T ss_pred             EEeeccccccceeeeccCccccceeccCCCceeeEeecCccH
Confidence            99997654 3567888999999999965 6678999999986

>KOG1034|consensus

Probab=99.95  E-value=6.3e-26  Score=187.90  Aligned_cols=322  Identities=19%  Similarity=0.322  Sum_probs=235.3

Q ss_pred             cCCCcEEEEEEcC-----CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCEEEEecCCC
Q psy17188        111 SHGEVVCAVTISN-----PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGGEAS  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~-----~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~dg  181 (504)
                      .|+.+|..++|.+     +-+.+|+.+.+.+.+|..........++......++.....++|+-|    ..+||+++.-|
T Consensus        36 d~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~G  115 (385)
T KOG1034|consen   36 DHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLG  115 (385)
T ss_pred             cCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeeccee
Confidence            6889999999984     45677888888999999876554455555544457788888899864    45889999999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADG  257 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~  257 (504)
                      .|+|.|+.+++  ....+.+|...|+.+.|.|+. +++++++.|..|++|++++..++..+   .+|...|.++.|+++|
T Consensus       116 vIrVid~~~~~--~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~g  193 (385)
T KOG1034|consen  116 VIRVIDVVSGQ--CSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDG  193 (385)
T ss_pred             EEEEEecchhh--hccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCC
Confidence            99999999665  467788999999999999965 68999999999999999999999887   4699999999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      .+|++++.|.+|++|++...++.-             .+.        .++.|+|++...-.-.  -...+.+..     
T Consensus       194 d~i~ScGmDhslk~W~l~~~~f~~-------------~lE--------~s~~~~~~~t~~pfpt--~~~~fp~fs-----  245 (385)
T KOG1034|consen  194 DRIASCGMDHSLKLWRLNVKEFKN-------------KLE--------LSITYSPNKTTRPFPT--PKTHFPDFS-----  245 (385)
T ss_pred             CeeeccCCcceEEEEecChhHHhh-------------hhh--------hhcccCCCCccCcCCc--ccccccccc-----
Confidence            999999999999999998654310             010        1245666543211100  112222221     


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC-CCCC----------CcccccccccCCCceEEEEEcCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ-PGSK----------TPVSQLDCLQRDNYIRSVKLLPD  406 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~----------~~~~~~~~~~~~~~i~~~~~s~~  406 (504)
                         ....|...|.++.|..+    ++++-+-++.|..|..-. .+..          ..+..+....-+-.....+|.|-
T Consensus       246 ---t~diHrnyVDCvrw~gd----~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~  318 (385)
T KOG1034|consen  246 ---TTDIHRNYVDCVRWFGD----FILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPW  318 (385)
T ss_pred             ---ccccccchHHHHHHHhh----heeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHH
Confidence               23346667778877765    788888899999998722 1110          01111111111222345567788


Q ss_pred             CCEEEEeeCCCcEEEeeCCCCCcce--eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        407 GRTLIVGGEASNLSIWDLASPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       407 g~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ++.||.|.+.|.|++||++..++..  ..........|...+|+.|+..|+..++|++|.-||.-
T Consensus       319 ~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  319 QKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             HHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            8999999999999999998766532  22233445678999999999999999999999999853

>KOG1445|consensus

Probab=99.95  E-value=1.4e-25  Score=201.44  Aligned_cols=143  Identities=20%  Similarity=0.300  Sum_probs=112.7

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCcc----ceeeeecCcCceEE
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPR----IKAELTSSAPACYA  208 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~v~~  208 (504)
                      +.+-|.-+...+.... ..-....|...|+.+.|+| +..+||+++.|..|+||.+..+-..    ....+.+..-.+-+
T Consensus        55 ~~lgvlPl~~~Gr~~r-~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~  133 (1012)
T KOG1445|consen   55 GKLGVLPLTAKGRRTR-DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVEC  133 (1012)
T ss_pred             ceEEEEeccccCcccc-ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEE
Confidence            4666666654332222 2223347999999999999 6678999999999999999843221    12334455567889


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        209 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       209 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      +.|+|...-|+..+..|+++|||+.+++.+..+.+|...|.+..|+.||++|++++.|..|+|||.+..
T Consensus       134 l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~  202 (1012)
T KOG1445|consen  134 LRFHPTADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRAS  202 (1012)
T ss_pred             eecccCcCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccC
Confidence            999996665555667799999999999999999999999999999999999999999999999999865

>KOG4328|consensus

Probab=99.95  E-value=3.2e-25  Score=191.63  Aligned_cols=304  Identities=16%  Similarity=0.179  Sum_probs=220.9

Q ss_pred             cCCCcEEEEEEcCCC--cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEE
Q psy17188        111 SHGEVVCAVTISNPT--KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIW  186 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~--~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw  186 (504)
                      -|.+.|++++|.|..  +++++|+ .|+|-+||+.+.+... -...-+..|..+|.++.|+| +-..+++.+.||+|++-
T Consensus       184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~-d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~  262 (498)
T KOG4328|consen  184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK-DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQ  262 (498)
T ss_pred             ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc-CceEEeccCCccccceEecCCChhheeeeccCceeeee
Confidence            588999999999943  6888888 8999999996432222 12334448999999999999 66789999999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEEcc-CCCEEEEEc
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISA-DGTKLWTGG  264 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~s~~  264 (504)
                      |++.........+......+..+.|+.+...++.+..=|...+||++++.. ...+..|...|.+++++| ...+|+|++
T Consensus       263 D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s  342 (498)
T KOG4328|consen  263 DFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATAS  342 (498)
T ss_pred             eecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecc
Confidence            999876655555555666788899999888888888888999999998654 666777999999999999 455899999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .|++.+|||++.-.-+           ..+.+....|...|.+..|||.+-.|++.+.|..|+|||..--....      
T Consensus       343 ~D~T~kIWD~R~l~~K-----------~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~------  405 (498)
T KOG4328|consen  343 LDQTAKIWDLRQLRGK-----------ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKD------  405 (498)
T ss_pred             cCcceeeeehhhhcCC-----------CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccC------
Confidence            9999999999875421           00156677899999999999988779999999999999974110000      


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                         .....-.+++                    +.             ..--......|.|+..++++|..-..|-|+|-
T Consensus       406 ---~p~~~I~Hn~--------------------~t-------------~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~  449 (498)
T KOG4328|consen  406 ---EPLGTIPHNN--------------------RT-------------GRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDG  449 (498)
T ss_pred             ---CccceeeccC--------------------cc-------------cccccchhheeCCCccEEEEeccCcceeEEcC
Confidence               0000000000                    00             00011236789999999999999999999998


Q ss_pred             CCCCcceeecccCCCCceeE-EEECCCCCEEEEe-eCCCcEEEEEcC
Q psy17188        425 ASPTPRIKAELTSSAPACYA-LAISPDSKVCFSC-CSDGNIAVWDLH  469 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~-~~dg~i~iwd~~  469 (504)
                      ..++.+.....+... .|.+ ..|+|-+..+++| +..|.|+||--+
T Consensus       450 ~~~q~v~el~~P~~~-tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  450 NGGQMVCELHDPESS-TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             CCCEEeeeccCcccc-ccccceeecccccceeccCCccceEEEEecC
Confidence            876543332222221 2333 4899988845544 557888888644

>KOG0321|consensus

Probab=99.95  E-value=1.9e-25  Score=200.77  Aligned_cols=303  Identities=20%  Similarity=0.316  Sum_probs=214.4

Q ss_pred             EEEEcc---CCCEEEEecCCCcEEEEeCCCCCcc----ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        164 SVKLLP---DGRTLIVGGEASNLSIWDLASPTPR----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       164 ~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +..|++   ....|+.+.+||.|.++|......+    .......|...|..+.|-|....|++++.|.++++||+++.+
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~  133 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR  133 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence            356665   4567899999999999998754432    234566799999999999977799999999999999999999


Q ss_pred             EEEe--ecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEE--------eecCCCCCCCcc-----cceecc
Q psy17188        237 LVRQ--FQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVW--------DISQPGSKTPVS-----QLDCLQ  300 (504)
Q Consensus       237 ~~~~--~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~--------~~~~~~~~~~~~-----~~~~~~  300 (504)
                      ++..  +.+|...|.+++|.| +...|++|+.||.|.|||++-..+...        ...... ..+..     ......
T Consensus       134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~-ptpskp~~kr~~k~kA  212 (720)
T KOG0321|consen  134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA-PTPSKPLKKRIRKWKA  212 (720)
T ss_pred             eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC-CCCCchhhcccccccc
Confidence            8877  889999999999999 456889999999999999986542111        111110 01111     111222


Q ss_pred             cCCceEE---EEEcCCCCEEEEEeC-CCcEEEEeCCCCCccce------eeeccC---CCceeeEEECCCCCCceeeecc
Q psy17188        301 RDNYIRS---VKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIK------AELTSS---APACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       301 ~~~~v~~---~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~------~~~~~~---~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                      +...|.+   +.+..|...|++++. |+.|+|||+++......      ..+..+   ...+.++.....|.  ++.+.+
T Consensus       213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt--~L~AsC  290 (720)
T KOG0321|consen  213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGT--YLFASC  290 (720)
T ss_pred             ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCC--eEEEEe
Confidence            3344444   556667788888877 99999999987643221      222222   33456666666666  444445


Q ss_pred             CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEE
Q psy17188        368 YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  447 (504)
Q Consensus       368 ~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~  447 (504)
                      .|+.|.+|++....... ...+........-..-..+||+.++++|+.|...++|.+.+.+. ....+.+|...|++++|
T Consensus       291 tD~sIy~ynm~s~s~sP-~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~-~~~~l~Ght~eVt~V~w  368 (720)
T KOG0321|consen  291 TDNSIYFYNMRSLSISP-VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA-PPALLLGHTREVTTVRW  368 (720)
T ss_pred             cCCcEEEEeccccCcCc-hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC-ChhhhhCcceEEEEEee
Confidence            59999999998653322 11221112222233456789999999999999999999987653 34456788899999999


Q ss_pred             CCC-CCEEEEeeCCCcEEEEEcCCc
Q psy17188        448 SPD-SKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       448 s~~-~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      .|. -.-++++++|..++||++.++
T Consensus       369 ~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  369 LPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             ccccCCCceeeccCcceEEEeccCc
Confidence            983 345778899999999999664

>KOG1009|consensus

Probab=99.94  E-value=1.4e-24  Score=185.03  Aligned_cols=329  Identities=18%  Similarity=0.258  Sum_probs=227.7

Q ss_pred             CCCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCCCCC---cee-eeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        112 HGEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPGSKT---PVS-QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       112 h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~~~~---~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      ...+|..+.|.++.. .+++++ |..|+||.+.......   .+. .-.+..|...|+++.|+|+|+.||+|+++|.|.+
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            346899999998776 899888 9999999987654433   222 2234479999999999999999999999999999


Q ss_pred             EeCC--------C------CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEE
Q psy17188        186 WDLA--------S------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI  251 (504)
Q Consensus       186 w~~~--------~------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~  251 (504)
                      |...        +      ........+.+|...|..++|+|++.++++++.|..+++||+..|+.+..+..|...+..+
T Consensus        92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgv  171 (434)
T KOG1009|consen   92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGV  171 (434)
T ss_pred             EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccccee
Confidence            9876        2      1233456677899999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCEEEEEcCCCeEEEEECCCCceEEE--------eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-
Q psy17188        252 DISADGTKLWTGGLDNTVRSWDLREGCVKVW--------DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-  322 (504)
Q Consensus       252 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  322 (504)
                      +|.|-++++++-+.|...+.+.+...++...        .........................++|+|+|.+|++... 
T Consensus       172 awDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~  251 (434)
T KOG1009|consen  172 AWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGL  251 (434)
T ss_pred             ecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccce
Confidence            9999999999999998777777665432111        0111111111112222223445678899999999988632 


Q ss_pred             ---CC-----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        323 ---AS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       323 ---dg-----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                         .+     ..++|+-.. ...+...++........+.++|-                .|.++.-....          
T Consensus       252 ~~~g~~~~~n~tYvfsrk~-l~rP~~~lp~~~k~~lavr~~pV----------------y~elrp~~~~~----------  304 (434)
T KOG1009|consen  252 FKVGGGVFRNTSYVFSRKD-LKRPAARLPSPKKPALAVRFSPV----------------YYELRPLSSEK----------  304 (434)
T ss_pred             eeeCCceeeceeEeecccc-ccCceeecCCCCcceEEEEeeee----------------EEEeccccccc----------
Confidence               11     234443322 11233333333334444444431                22322110000          


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                           .+---|-+..+|+++ .+.+++||.++..+.... ..-|-..++.++|++||..|+..+.||...+-.++..++-
T Consensus       305 -----~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v-~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  305 -----FLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVV-DNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             -----cccccccceEEEEee-cceEEEeccccccceEEE-eeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence                 012224444556665 456999999987665543 3456778999999999999999999999888877765543

>KOG4328|consensus

Probab=99.94  E-value=7.9e-25  Score=189.25  Aligned_cols=290  Identities=18%  Similarity=0.279  Sum_probs=223.1

Q ss_pred             eeeeecCcCceEEEEECCCC--CEEEEEeCCCcEEEEECCCC----eEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCe
Q psy17188        196 KAELTSSAPACYALAISPDS--KVCFSCCSDGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNT  268 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~  268 (504)
                      ......+..+|++++|+|..  +++++|...|.|-+||+.+.    .-+..+..|..+|.++.|+| +...+++.|+||+
T Consensus       179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt  258 (498)
T KOG4328|consen  179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT  258 (498)
T ss_pred             cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence            44556678889999999954  58889999999999999532    34566788999999999999 5568999999999


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |++-|++.+....             ..........+.++.|+.+...++.+..=|.+.+||+++... ....+..|...
T Consensus       259 iR~~D~~~~i~e~-------------v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s-~~~~~~lh~kK  324 (498)
T KOG4328|consen  259 IRLQDFEGNISEE-------------VLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS-EYENLRLHKKK  324 (498)
T ss_pred             eeeeeecchhhHH-------------HhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc-cchhhhhhhcc
Confidence            9999999875321             112222345567888888888888888888999999998753 23444556669


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC---
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA---  425 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~---  425 (504)
                      |..++++|-..+ ++++++.|++.+|||++....... ..+....|...|.++.|||++..|++.+.|..|+|||..   
T Consensus       325 I~sv~~NP~~p~-~laT~s~D~T~kIWD~R~l~~K~s-p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~s  402 (498)
T KOG4328|consen  325 ITSVALNPVCPW-FLATASLDQTAKIWDLRQLRGKAS-PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCIS  402 (498)
T ss_pred             cceeecCCCCch-heeecccCcceeeeehhhhcCCCC-cceecccccceeeeeEEcCCCCceEeeccCCceEEeeccccc
Confidence            999999999887 899999999999999998665553 245666889999999999998889999999999999983   


Q ss_pred             -CCCcceeecccC---CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC-ceEEE-EEccCCCEEEEe
Q psy17188        426 -SPTPRIKAELTS---SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCI-DISADGTKLWTG  499 (504)
Q Consensus       426 -~~~~~~~~~~~~---~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~-~~s~d~~~l~s~  499 (504)
                       ...+........   .-.......|.|+..++++|-.-..|-|+|-..++.+..+..... .|.++ .|+|-+..+++|
T Consensus       403 a~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG  482 (498)
T KOG4328|consen  403 AKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAG  482 (498)
T ss_pred             ccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceecc
Confidence             222222222111   111234568999999999999999999999999988887654433 45544 799988867777


Q ss_pred             cC
Q psy17188        500 GL  501 (504)
Q Consensus       500 s~  501 (504)
                      |.
T Consensus       483 ~~  484 (498)
T KOG4328|consen  483 GN  484 (498)
T ss_pred             CC
Confidence            65

>KOG4378|consensus

Probab=99.94  E-value=4e-25  Score=192.87  Aligned_cols=298  Identities=15%  Similarity=0.232  Sum_probs=222.7

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe--cCCCcEEEEeCCCCCccceeeeecCcC
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG--GEASNLSIWDLASPTPRIKAELTSSAP  204 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~  204 (504)
                      +.++++...++|||+........+...   ...-.+.++.|+.... |+++  +.|..+++|.-....+.....-.....
T Consensus         5 l~~aS~gd~~kl~D~s~~~~~~~~~~~---t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd   80 (673)
T KOG4378|consen    5 LHVASTGDKTKLSDFSDLETKSEYVHQ---TAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD   80 (673)
T ss_pred             eeeeccCCceEEeecccccCccccccC---CCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccc
Confidence            455555568999999775444333322   2233499999997664 4443  567889999765432222211111222


Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      .-.|++......++++|+..+.|+|||++...+.+.+++|...|+++.++....+|++++..|.|.+..+.++.-.    
T Consensus        81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t----  156 (673)
T KOG4378|consen   81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT----  156 (673)
T ss_pred             hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc----
Confidence            3445555555689999999999999999988888889999999999999998899999999999999999887521    


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                                ..........++-+.|++..+. |.+++.+|.+.+||+.... ........|..+...++|+|.... ++
T Consensus       157 ----------t~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~s-p~~~~~~~HsAP~~gicfspsne~-l~  224 (673)
T KOG4378|consen  157 ----------TTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMS-PIFHASEAHSAPCRGICFSPSNEA-LL  224 (673)
T ss_pred             ----------cceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCC-cccchhhhccCCcCcceecCCccc-eE
Confidence                      1111233455778999997765 5567899999999998754 334455678889999999998876 78


Q ss_pred             eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                      ++-+.|..|.+||.........      .....+...++|+++|.+|+.|+..|.|..||++..+ ..+.....|...|+
T Consensus       225 vsVG~Dkki~~yD~~s~~s~~~------l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k-~Pv~v~sah~~sVt  297 (673)
T KOG4378|consen  225 VSVGYDKKINIYDIRSQASTDR------LTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK-APVAVRSAHDASVT  297 (673)
T ss_pred             EEecccceEEEeecccccccce------eeecCCcceeeecCCceEEEeecCCceEEEEecccCC-CCceEeeeccccee
Confidence            8899999999999985433322      2346678899999999999999999999999998644 44556678888899


Q ss_pred             EEEECCCC
Q psy17188        444 ALAISPDS  451 (504)
Q Consensus       444 ~l~~s~~~  451 (504)
                      +++|-|..
T Consensus       298 ~vafq~s~  305 (673)
T KOG4378|consen  298 RVAFQPSP  305 (673)
T ss_pred             EEEeeecc
Confidence            99998764

>KOG1273|consensus

Probab=99.94  E-value=1.5e-24  Score=178.79  Aligned_cols=272  Identities=14%  Similarity=0.211  Sum_probs=201.7

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeec
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~  285 (504)
                      ..|+.|++.|.+||+|+.||.|.|||+.+...-+.+.+|..+|++++|++||+.|+|+|.|..|.+||+..|.       
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs-------   98 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS-------   98 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC-------
Confidence            6789999999999999999999999999999999999999999999999999999999999999999999987       


Q ss_pred             CCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeec--cCCCceeeEEECCCCCCce
Q psy17188        286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELT--SSAPACYALAISPDSKSPF  362 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~  362 (504)
                               .+.......+|....|+|..+ ..++.-.+..-.+.++..+.......-.  .......+..|.+.|+  +
T Consensus        99 ---------~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~--y  167 (405)
T KOG1273|consen   99 ---------PLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGK--Y  167 (405)
T ss_pred             ---------ceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCC--E
Confidence                     444556678899999999543 3333333333445555432211111111  1111122234667777  8


Q ss_pred             eeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-------Ccceeecc
Q psy17188        363 FSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-------TPRIKAEL  435 (504)
Q Consensus       363 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~  435 (504)
                      +++|...|.+.++|..+.+.....+..    ....|..+.++..|++|++-+.|..|+.|+++.-       +.....++
T Consensus       168 IitGtsKGkllv~~a~t~e~vas~rit----s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~  243 (405)
T KOG1273|consen  168 IITGTSKGKLLVYDAETLECVASFRIT----SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKL  243 (405)
T ss_pred             EEEecCcceEEEEecchheeeeeeeec----hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHH
Confidence            999999999999999876444333322    1356889999999999999999999999998631       11111111


Q ss_pred             c--CCCCceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEeecC-CceEEEEEccCCCEEEEe
Q psy17188        436 T--SSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTG  499 (504)
Q Consensus       436 ~--~~~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l~s~  499 (504)
                      .  -....=.+++|+.||.|++.++. ...++||+-..|.+++.+.|.. ....++.|+|-...+++-
T Consensus       244 qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si  311 (405)
T KOG1273|consen  244 QDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI  311 (405)
T ss_pred             HHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec
Confidence            1  01112245799999999987764 4679999999999999999877 467889999987777765

>KOG1009|consensus

Probab=99.94  E-value=3e-24  Score=183.02  Aligned_cols=301  Identities=19%  Similarity=0.287  Sum_probs=214.9

Q ss_pred             CCCceEEEEEccCCC-EEEEecCCCcEEEEeCCCCCc-------cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEE
Q psy17188        158 RDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTP-------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  229 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  229 (504)
                      ...+|.++.|.++.. .|++|+.|..|+||.+.....       .....+..|...|+++.|+|+|.+|++|+.+|.|.+
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            356789999998766 999999999999999875432       234567789999999999999999999999999999


Q ss_pred             EECC--------C--------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188        230 WDLH--------N--------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV  293 (504)
Q Consensus       230 wd~~--------~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~  293 (504)
                      |...        +        ....+.+.+|...|..++|+|++..+++++.|..+++||+..|++              
T Consensus        92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l--------------  157 (434)
T KOG1009|consen   92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQL--------------  157 (434)
T ss_pred             EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEecccee--------------
Confidence            9765        2        234566788999999999999999999999999999999999986              


Q ss_pred             ccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       294 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                       ......|...+..++|.|-++++++-+.|...+.+.+...........    ..+..-+..          .......+
T Consensus       158 -~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~----~~m~~~~~~----------~~e~~s~r  222 (434)
T KOG1009|consen  158 -LAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGL----DIMPAKAFN----------EREGKSTR  222 (434)
T ss_pred             -EeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeee----eEeeecccC----------CCCcceee
Confidence             444567888999999999999999999988777777654321111110    000000000          11122334


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----C-----CcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A-----SNLSIWDLASPTPRIKAELTSSAPACYA  444 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~  444 (504)
                      +|.-++              .......++|+|||.+|++...    .     +..++|+-...+ +....++........
T Consensus       223 LfhDeT--------------lksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~-rP~~~lp~~~k~~la  287 (434)
T KOG1009|consen  223 LFHDET--------------LKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLK-RPAARLPSPKKPALA  287 (434)
T ss_pred             eeecCc--------------hhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeecccccc-CceeecCCCCcceEE
Confidence            443222              1223447899999999887532    1     234555544222 223334444444555


Q ss_pred             EEECC------------------CCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCCCEEEEecCCC
Q psy17188        445 LAISP------------------DSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       445 l~~s~------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +.|+|                  -+-.+|.++. ..|+|||.++.+++..... |-..|++++|++||..|+..|.||
T Consensus       288 vr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DG  364 (434)
T KOG1009|consen  288 VRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDG  364 (434)
T ss_pred             EEeeeeEEEeccccccccccccccceEEEEeec-ceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCC
Confidence            55554                  2223455554 4699999999888776654 778999999999999999999998

>KOG0646|consensus

Probab=99.94  E-value=1.5e-24  Score=188.06  Aligned_cols=258  Identities=17%  Similarity=0.249  Sum_probs=199.9

Q ss_pred             cccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC
Q psy17188         94 ALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  172 (504)
                      .+..|.+.+..+..+..--.++|.|++-+|+|.+|+.|. .+.|++|.+.+|.....+.     .|-..|+|+.|+.||.
T Consensus        62 ~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~-----aHYQ~ITcL~fs~dgs  136 (476)
T KOG0646|consen   62 LLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLS-----AHYQSITCLKFSDDGS  136 (476)
T ss_pred             cccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHH-----hhccceeEEEEeCCCc
Confidence            445555555544444555668999999999999999997 9999999999986544432     8999999999999999


Q ss_pred             EEEEecCCCcEEEEeCC-------CCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188        173 TLIVGGEASNLSIWDLA-------SPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQG  243 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~-------~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  243 (504)
                      +|++|+.||.|.+|.+.       +........+..|.-+|+++...+.  ..+|++++.|.++++||+..+.++.++. 
T Consensus       137 ~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-  215 (476)
T KOG0646|consen  137 HIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-  215 (476)
T ss_pred             EEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-
Confidence            99999999999999863       2245567788999999999998775  3589999999999999999999998887 


Q ss_pred             CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeec-CCCCCCCcccceecccCC--ceEEEEEcCCCCEEEEE
Q psy17188        244 HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDIS-QPGSKTPVSQLDCLQRDN--YIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~  320 (504)
                      ....+.+++.+|-++.++.|+.+|.|.+.++..-.-..-++. ..............+|.+  .|+|++++-||..|++|
T Consensus       216 fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSG  295 (476)
T KOG0646|consen  216 FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSG  295 (476)
T ss_pred             cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEee
Confidence            778899999999999999999999999988765331111111 001111111223345555  99999999999999999


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                      +.||++.|||+.+.+.  ...+....++|+.+.+.|-.+
T Consensus       296 d~dg~VcvWdi~S~Q~--iRtl~~~kgpVtnL~i~~~~~  332 (476)
T KOG0646|consen  296 DEDGKVCVWDIYSKQC--IRTLQTSKGPVTNLQINPLER  332 (476)
T ss_pred             CCCCCEEEEecchHHH--HHHHhhhccccceeEeecccc
Confidence            9999999999988643  333333556888888866533

>KOG2445|consensus

Probab=99.93  E-value=1.4e-23  Score=172.55  Aligned_cols=273  Identities=14%  Similarity=0.261  Sum_probs=193.9

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC--CccceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEEC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--TPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~  232 (504)
                      +|.+-|+++.|.+.|+.+|+++.|++|+|||.++.  +.........|.+.|..+.|.+  -|+.+++++.|+++.||.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            78899999999999999999999999999997543  4455667889999999999965  5889999999999999975


Q ss_pred             CC---------CeEEEeecCCCCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecc
Q psy17188        233 HN---------QTLVRQFQGHTDGASCIDISA--DGTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       233 ~~---------~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      ..         .....++....+.|+.++|.|  -|-.|++++.||++|||+.-. ..+..|.+..+-.           
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~-----------  159 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQ-----------  159 (361)
T ss_pred             cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhh-----------
Confidence            21         134455666788899999998  466889999999999998653 2222222111100           


Q ss_pred             cCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC-CceeeeccCC-----CeEEE
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-SPFFSSHHYK-----SCVKV  374 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~-----~~i~i  374 (504)
                                                          ........+.....++.|+|... ..+++.++.+     +.+.|
T Consensus       160 ------------------------------------~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~I  203 (361)
T KOG2445|consen  160 ------------------------------------NVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKI  203 (361)
T ss_pred             ------------------------------------hccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEE
Confidence                                                00001111222444444543321 1245555544     47888


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCC----CCEEEEeeCCCcEEEeeCCCC------------------Cccee
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDLASP------------------TPRIK  432 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----g~~l~~~~~dg~i~iwd~~~~------------------~~~~~  432 (504)
                      |....... +-........+..+|++++|.|+    -..||+++.|| |+||.++..                  ....+
T Consensus       204 ye~~e~~r-Kw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~v  281 (361)
T KOG2445|consen  204 YEYNENGR-KWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKV  281 (361)
T ss_pred             EEecCCcc-eeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEe
Confidence            88766532 22223334478999999999995    35799999999 999998731                  11233


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC---cceEEEEe
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---QTLVRQFQ  478 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~  478 (504)
                      ..+..|...|..+.|+-.|..|++.+.||.||+|...-   .++...+.
T Consensus       282 s~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~  330 (361)
T KOG2445|consen  282 SELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLK  330 (361)
T ss_pred             eeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEe
Confidence            45778999999999999999999999999999997532   34555554

>KOG0650|consensus

Probab=99.93  E-value=4.1e-24  Score=190.81  Aligned_cols=295  Identities=17%  Similarity=0.232  Sum_probs=222.6

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC--EEEEEcCCCeEEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT--KLWTGGLDNTVRSWD  273 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~~wd  273 (504)
                      ...+.+|.+.|.+|...|.|.+|++|+.||+|+||.+.++.+++++. ..+.|.|++|+|.+.  .|+++- +..+.+.+
T Consensus       393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~-~~~~~ivn  470 (733)
T KOG0650|consen  393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAV-GECVLIVN  470 (733)
T ss_pred             eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEe-cCceEEeC
Confidence            45678999999999999999999999999999999999999999988 677999999999655  444443 44466666


Q ss_pred             CCCCc-----------------------eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---CcEE
Q psy17188        274 LREGC-----------------------VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLS  327 (504)
Q Consensus       274 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~  327 (504)
                      ..-|.                       +..|.-..... ..........+...|..+.|+..|.+|++...+   ..|.
T Consensus       471 p~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e-~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl  549 (733)
T KOG0650|consen  471 PIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDE-LEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL  549 (733)
T ss_pred             ccccchhhhcchhhhhhcCCCccCCcccceeechhhhhh-hccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence            55441                       01111110000 001122345678889999999999999997654   4688


Q ss_pred             EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188        328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  407 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g  407 (504)
                      |+++....  ....+....+.+..+.|+|....+++++   ...|+|||+......+     +.......|..++.+|.|
T Consensus       550 iHQLSK~~--sQ~PF~kskG~vq~v~FHPs~p~lfVaT---q~~vRiYdL~kqelvK-----kL~tg~kwiS~msihp~G  619 (733)
T KOG0650|consen  550 IHQLSKRK--SQSPFRKSKGLVQRVKFHPSKPYLFVAT---QRSVRIYDLSKQELVK-----KLLTGSKWISSMSIHPNG  619 (733)
T ss_pred             EEeccccc--ccCchhhcCCceeEEEecCCCceEEEEe---ccceEEEehhHHHHHH-----HHhcCCeeeeeeeecCCC
Confidence            88887653  3345555667899999999988533333   5679999997532222     222345678899999999


Q ss_pred             CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc-------CCc--ceEEEEe
Q psy17188        408 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL-------HNQ--TLVRQFQ  478 (504)
Q Consensus       408 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~-------~~~--~~~~~~~  478 (504)
                      ..|++|+.|+.+..||+.-... ....+..|...++.++|++.-.++++|+.||++.|+.-       ++.  -.++.+.
T Consensus       620 Dnli~gs~d~k~~WfDldlssk-Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~  698 (733)
T KOG0650|consen  620 DNLILGSYDKKMCWFDLDLSSK-PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLR  698 (733)
T ss_pred             CeEEEecCCCeeEEEEcccCcc-hhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeecc
Confidence            9999999999999999986543 34456778889999999999999999999999999852       222  2356788


Q ss_pred             ecCCc----eEEEEEccCCCEEEEecCCCC
Q psy17188        479 GHTDG----ASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       479 ~h~~~----v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +|...    |.++.|+|...+|+++|.|||
T Consensus       699 gH~~~~~~gVLd~~wHP~qpWLfsAGAd~t  728 (733)
T KOG0650|consen  699 GHEKTNDLGVLDTIWHPRQPWLFSAGADGT  728 (733)
T ss_pred             CceeecccceEeecccCCCceEEecCCCce
Confidence            88765    889999999999999999986

>KOG0267|consensus

Probab=99.93  E-value=3.1e-26  Score=208.60  Aligned_cols=254  Identities=23%  Similarity=0.433  Sum_probs=213.8

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEE
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID  252 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~  252 (504)
                      +++....+-.+++|+.+        ....|...+.++..-..++.+++|+.|..+.+|.+.....+..+.+|..+|.++.
T Consensus         6 ~~m~~~~~t~Lr~~~~~--------~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~   77 (825)
T KOG0267|consen    6 FLMKTKRATKLRVWDTR--------EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLT   77 (825)
T ss_pred             ccceeeeeeccccccch--------hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeee
Confidence            34444455667788754        2345777788888777788999999999999999998888888999999999999


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      |+++..+|++|+.+|+|++||++.++.               ......|...+.++.|+|-+.+.+.++.|..+.+||.+
T Consensus        78 f~~~E~LlaagsasgtiK~wDleeAk~---------------vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R  142 (825)
T KOG0267|consen   78 FDTSERLLAAGSASGTIKVWDLEEAKI---------------VRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIR  142 (825)
T ss_pred             cCcchhhhcccccCCceeeeehhhhhh---------------hhhhhccccCcceeeeccceEEeccccccccceehhhh
Confidence            999999999999999999999998764               34556788889999999999999999999999999987


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~  412 (504)
                      ...                                   ++..|+                .|...+..+.|+|+|++++.
T Consensus       143 k~G-----------------------------------c~~~~~----------------s~~~vv~~l~lsP~Gr~v~~  171 (825)
T KOG0267|consen  143 KKG-----------------------------------CSHTYK----------------SHTRVVDVLRLSPDGRWVAS  171 (825)
T ss_pred             ccC-----------------------------------ceeeec----------------CCcceeEEEeecCCCceeec
Confidence            542                                   122222                23444668999999999999


Q ss_pred             eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        413 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       413 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      +++|..++|||...++.  ..++..|...+..+.|+|..-++++|+.|+++++||+++-+.+.........|.++.|+|+
T Consensus       172 g~ed~tvki~d~~agk~--~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~  249 (825)
T KOG0267|consen  172 GGEDNTVKIWDLTAGKL--SKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPD  249 (825)
T ss_pred             cCCcceeeeeccccccc--ccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCC
Confidence            99999999999987754  4566778889999999999999999999999999999999999888888889999999999


Q ss_pred             CCEEEEecCC
Q psy17188        493 GTKLWTGGLD  502 (504)
Q Consensus       493 ~~~l~s~s~D  502 (504)
                      ++.+++|-.+
T Consensus       250 ~~~~~~G~q~  259 (825)
T KOG0267|consen  250 GKIVLSGEQI  259 (825)
T ss_pred             ceeeecCchh
Confidence            9999887653

>KOG0650|consensus

Probab=99.93  E-value=1.3e-23  Score=187.54  Aligned_cols=310  Identities=18%  Similarity=0.233  Sum_probs=227.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC--EEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~iw~  187 (504)
                      +|++.|.++...|.|.+|++|+ ||+|+||.+.++.+...+      .-.+.|.|++|+|.++  .||++- +..+.|-+
T Consensus       398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~------~~d~~I~~vaw~P~~~~~vLAvA~-~~~~~ivn  470 (733)
T KOG0650|consen  398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTV------QFDSEIRSVAWNPLSDLCVLAVAV-GECVLIVN  470 (733)
T ss_pred             ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEE------eecceeEEEEecCCCCceeEEEEe-cCceEEeC
Confidence            9999999999999999999999 999999999997543333      3456899999999654  445543 44466666


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCCCCEEEEE----eCCCcEEEEECCCC----eEEEeecCCCCCeEEEEEccCCCE
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPDSKVCFSC----CSDGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                      ..-+.....               -+....|+++    ..++.+..|.-...    .-++..-.|...|..+.|+..|.+
T Consensus       471 p~~G~~~e~---------------~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDY  535 (733)
T KOG0650|consen  471 PIFGDRLEV---------------GPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDY  535 (733)
T ss_pred             ccccchhhh---------------cchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCce
Confidence            543321100               0001112221    23456777864421    113334449999999999999999


Q ss_pred             EEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        260 LWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       260 l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      |++...+   ..|.|.++.....               +.......+.+.++.|+|...+|++++. ..|++||+...  
T Consensus       536 latV~~~~~~~~VliHQLSK~~s---------------Q~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kq--  597 (733)
T KOG0650|consen  536 LATVMPDSGNKSVLIHQLSKRKS---------------QSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQ--  597 (733)
T ss_pred             EEEeccCCCcceEEEEecccccc---------------cCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHH--
Confidence            9998765   4688888876653               3334455677999999999999998865 57999999864  


Q ss_pred             cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        337 RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      .....+......+..++++|.|.  -++.++.|+.+..||+......  .+  ....|...+++++|++.-.++++|+.|
T Consensus       598 elvKkL~tg~kwiS~msihp~GD--nli~gs~d~k~~WfDldlsskP--yk--~lr~H~~avr~Va~H~ryPLfas~sdD  671 (733)
T KOG0650|consen  598 ELVKKLLTGSKWISSMSIHPNGD--NLILGSYDKKMCWFDLDLSSKP--YK--TLRLHEKAVRSVAFHKRYPLFASGSDD  671 (733)
T ss_pred             HHHHHHhcCCeeeeeeeecCCCC--eEEEecCCCeeEEEEcccCcch--hH--HhhhhhhhhhhhhhccccceeeeecCC
Confidence            55556666667899999999998  5888999999999999864322  11  223577889999999999999999999


Q ss_pred             CcEEEeeC-------CCCCcceeecccCCCCc----eeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        417 SNLSIWDL-------ASPTPRIKAELTSSAPA----CYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       417 g~i~iwd~-------~~~~~~~~~~~~~~~~~----v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      |++.||.-       ++.....+..+.+|...    |..+.|+|...+|++++.||+|++|
T Consensus       672 gtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  672 GTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             CcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            99998853       22223344556666655    8888999999999999999999998

>KOG0321|consensus

Probab=99.93  E-value=1.1e-23  Score=189.48  Aligned_cols=296  Identities=17%  Similarity=0.245  Sum_probs=213.4

Q ss_pred             EEEcC---CCcEEEEec-CCeEEEEeCCCCCCC-CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc
Q psy17188        119 VTISN---PTKYVYTGG-KGCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  193 (504)
Q Consensus       119 v~~s~---~~~~l~~~~-d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  193 (504)
                      ..|++   ...+|+.+. ||.|.++|....... ..........|.+.|..+.|.|....|++++.|.++++||+++.+.
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l  134 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL  134 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence            44553   345677777 999999998654322 1111123346999999999999777899999999999999998776


Q ss_pred             cceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCe---------------------------EEEeecCCC
Q psy17188        194 RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQT---------------------------LVRQFQGHT  245 (504)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~---------------------------~~~~~~~h~  245 (504)
                      .-...+.+|...|.+++|.|.. ..|++|+.||.|.|||++-..                           .+..-+.+.
T Consensus       135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s  214 (720)
T KOG0321|consen  135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS  214 (720)
T ss_pred             ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence            6555688999999999999955 488999999999999986432                           111122345


Q ss_pred             CCeEE---EEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceec---ccCCceEEEEEcCCCCEEE
Q psy17188        246 DGASC---IDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL---QRDNYIRSVKLLPDGRTLI  318 (504)
Q Consensus       246 ~~v~~---~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~  318 (504)
                      ..|.+   +.+..|...|++++. |+.|++||++...... ....      .......   .....+.++.....|.+|+
T Consensus       215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~-r~ep------~~~~~~~t~skrs~G~~nL~lDssGt~L~  287 (720)
T KOG0321|consen  215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY-RQEP------RGSDKYPTHSKRSVGQVNLILDSSGTYLF  287 (720)
T ss_pred             CceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccc-ccCC------CcccCccCcccceeeeEEEEecCCCCeEE
Confidence            55555   555667889999888 9999999999765321 1111      1111111   1234577888888899999


Q ss_pred             EEeCCCcEEEEeCCCCCccceeeeccCCCce--eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        319 VGGEASNLSIWDLASPTPRIKAELTSSAPAC--YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +.+.|+.|+.|++.+........+.++...-  ..-..+|++.  ++++++.|....+|.+........    ....|..
T Consensus       288 AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~--~l~SgSsd~~ayiw~vs~~e~~~~----~l~Ght~  361 (720)
T KOG0321|consen  288 ASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDC--SLLSGSSDEQAYIWVVSSPEAPPA----LLLGHTR  361 (720)
T ss_pred             EEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCc--eEeccCCCcceeeeeecCccCChh----hhhCcce
Confidence            9999999999999887655555555443222  2234678888  899999999999999987544332    2347888


Q ss_pred             ceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCC
Q psy17188        397 YIRSVKLLPDG-RTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       397 ~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .|++++|.|.. .-++++++|..+++|++..+
T Consensus       362 eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  362 EVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             EEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence            89999998843 34677799999999999654

>KOG2445|consensus

Probab=99.93  E-value=3.4e-23  Score=170.32  Aligned_cols=251  Identities=16%  Similarity=0.225  Sum_probs=196.5

Q ss_pred             cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEE
Q psy17188        242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIV  319 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~  319 (504)
                      .+|..-|.++.|.+-|+++++|+.|++++|||.+...- .|.          ..-....|.+.|..+.|.+  -|+.+++
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~-~W~----------~Ts~Wrah~~Si~rV~WAhPEfGqvvA~   78 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSG-TWS----------CTSSWRAHDGSIWRVVWAHPEFGQVVAT   78 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCC-ceE----------EeeeEEecCCcEEEEEecCccccceEEE
Confidence            46888899999999999999999999999999754321 111          1444567889999999976  6899999


Q ss_pred             EeCCCcEEEEeCCC-------CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc-
Q psy17188        320 GGEASNLSIWDLAS-------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC-  391 (504)
Q Consensus       320 ~~~dg~i~v~d~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-  391 (504)
                      ++.|+++.||.-..       .+......+......++.+.|.|....+.+++++.||.+|||+............... 
T Consensus        79 cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei  158 (361)
T KOG2445|consen   79 CSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEI  158 (361)
T ss_pred             EecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhh
Confidence            99999999997521       2344556677788899999999999998999999999999999865433222221111 


Q ss_pred             -------ccCCCceEEEEEcCC---CCEEEEeeCC-----CcEEEeeCCCC--CcceeecccCCCCceeEEEECCC----
Q psy17188        392 -------LQRDNYIRSVKLLPD---GRTLIVGGEA-----SNLSIWDLASP--TPRIKAELTSSAPACYALAISPD----  450 (504)
Q Consensus       392 -------~~~~~~i~~~~~s~~---g~~l~~~~~d-----g~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~s~~----  450 (504)
                             ..+...-.|+.|+|.   ..+||+|+.+     +.++||.....  +.....++.++..+|+.++|.|+    
T Consensus       159 ~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~  238 (361)
T KOG2445|consen  159 QNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRS  238 (361)
T ss_pred             hhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCc
Confidence                   125566779999974   4688888876     46888876544  34455678899999999999995    


Q ss_pred             CCEEEEeeCCCcEEEEEcCCc--------------------ceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        451 SKVCFSCCSDGNIAVWDLHNQ--------------------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       451 ~~~l~s~~~dg~i~iwd~~~~--------------------~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      -.+||+++.|| |+||.+...                    +.+..+..|++.|+.+.|.-.|..|++.|.||+
T Consensus       239 y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~  311 (361)
T KOG2445|consen  239 YHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGC  311 (361)
T ss_pred             eeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCce
Confidence            45899999999 999998731                    234567789999999999999999999999995

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.93  E-value=5.9e-21  Score=184.03  Aligned_cols=366  Identities=27%  Similarity=0.533  Sum_probs=273.1

Q ss_pred             eecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCC-CceEEEEE-ccCCC-EEEEecC-CCcE
Q psy17188        109 TLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKL-LPDGR-TLIVGGE-ASNL  183 (504)
Q Consensus       109 ~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~v~~~~~-s~~~~-~l~~~~~-dg~i  183 (504)
                      ...|...+.++.+.+.+..++.++ |+.+.+|+.....  .....+.  ... ..+..+.+ ++++. .++..+. |+.+
T Consensus        61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  136 (466)
T COG2319          61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE--KLIKSLE--GLHDSSVSKLALSSPDGNSILLASSSLDGTV  136 (466)
T ss_pred             eeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc--eeEEEEe--ccCCCceeeEEEECCCcceEEeccCCCCccE
Confidence            348999999999999999999887 9999999988753  1222222  222 36777777 88887 5555444 8999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLW  261 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~  261 (504)
                      .+|+... .......+..|...|..++|+|++..+++++. |+.+++|++..+..+..+.+|...|.+++|+|++. .++
T Consensus       137 ~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  215 (466)
T COG2319         137 KLWDLST-PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA  215 (466)
T ss_pred             EEEEecC-CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence            9999986 12346778889999999999999998888885 99999999999899999999999999999999987 555


Q ss_pred             EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188        262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  341 (504)
Q Consensus       262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~  341 (504)
                      +++.|+.+++||...+.....              ....+.... ...|++++..+++++.++.+++|+...... ....
T Consensus       216 ~~~~d~~i~~wd~~~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~  279 (466)
T COG2319         216 SGSSDGTIRLWDLSTGKLLRS--------------TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS-LLRT  279 (466)
T ss_pred             EecCCCcEEEEECCCCcEEee--------------ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc-EEEE
Confidence            559999999998886553210              223333333 228999998899999999999999987654 1222


Q ss_pred             eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEE
Q psy17188        342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLS  420 (504)
Q Consensus       342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~  420 (504)
                      ...|...+.++.+.|++.  .+++++.++.+.+|+...........   ...+...+..+.+.+++..++.+ ..|+.+.
T Consensus       280 ~~~~~~~v~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  354 (466)
T COG2319         280 LSGHSSSVLSVAFSPDGK--LLASGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIR  354 (466)
T ss_pred             EecCCccEEEEEECCCCC--EEEEeeCCCcEEEEEcCCCceEEEee---ecccCCceEEEEECCCCCEEEEeecCCCcEE
Confidence            256678999999999666  45557777889999887654333222   23455578889884343556665 6788899


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEE-eeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      +|+.....  ........ ..+..+.+.+ ...+.. +..++.+.+|+............+...+....+++++..++++
T Consensus       355 ~~~~~~~~--~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (466)
T COG2319         355 LWDLRTGK--PLKTLEGH-SNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASG  430 (466)
T ss_pred             eeecCCCc--eeEEecCC-ceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEe
Confidence            99998765  22222222 1278889988 544444 6889999999999988877776544789999999999999987


Q ss_pred             cCCCC
Q psy17188        500 GLDNT  504 (504)
Q Consensus       500 s~Dgt  504 (504)
                      +.+++
T Consensus       431 ~~~~~  435 (466)
T COG2319         431 SSDNT  435 (466)
T ss_pred             cCCCc
Confidence            76653

>KOG0270|consensus

Probab=99.93  E-value=1.8e-23  Score=180.23  Aligned_cols=291  Identities=17%  Similarity=0.277  Sum_probs=209.6

Q ss_pred             EEEEcCCCcEEEEec--C--CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-------CCCEEEEecCCCcEEEE
Q psy17188        118 AVTISNPTKYVYTGG--K--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNLSIW  186 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~--d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i~iw  186 (504)
                      .+.+-|+..+|+++.  |  ..+.+|=.+...  ..+....-.--...-.|++|..       .|+++|.|+.|..|.||
T Consensus       130 e~~V~psDnlIl~ar~eddvs~LEvYVyn~~e--~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIW  207 (463)
T KOG0270|consen  130 EEQVKPSDNLILCARNEDDVSYLEVYVYNEEE--ENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIW  207 (463)
T ss_pred             cceeccCCcEEEEeeccCCceEEEEEEEcCCC--cceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEe
Confidence            445567677777775  3  344444433321  1111100000123345666653       36899999999999999


Q ss_pred             eCCCCCcc-------------------ceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCC
Q psy17188        187 DLASPTPR-------------------IKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  246 (504)
Q Consensus       187 ~~~~~~~~-------------------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~  246 (504)
                      |+.-....                   ......+|+..|.+++|+.. .+.|++|+.|.+|++||+.++++..++..|.+
T Consensus       208 DLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k  287 (463)
T KOG0270|consen  208 DLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGK  287 (463)
T ss_pred             ccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCC
Confidence            98532110                   11123468888889999875 45899999999999999999999999999999


Q ss_pred             CeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCC
Q psy17188        247 GASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEAS  324 (504)
Q Consensus       247 ~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg  324 (504)
                      .|.++.|+| ....|++|+.|+++.+.|.+....               .-......+.|..++|.|.. ..++++..||
T Consensus       288 ~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~---------------s~~~wk~~g~VEkv~w~~~se~~f~~~tddG  352 (463)
T KOG0270|consen  288 KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN---------------SGKEWKFDGEVEKVAWDPHSENSFFVSTDDG  352 (463)
T ss_pred             ceeEEEecCCCceEEEeccccceEEeeeccCccc---------------cCceEEeccceEEEEecCCCceeEEEecCCc
Confidence            999999999 567999999999999999984221               11223446778999999954 5678888999


Q ss_pred             cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      +++-+|++... .....++.|...|.++++++.... ++++++.++.+++|++............   ..-+...|+++.
T Consensus       353 ~v~~~D~R~~~-~~vwt~~AHd~~ISgl~~n~~~p~-~l~t~s~d~~Vklw~~~~~~~~~v~~~~---~~~~rl~c~~~~  427 (463)
T KOG0270|consen  353 TVYYFDIRNPG-KPVWTLKAHDDEISGLSVNIQTPG-LLSTASTDKVVKLWKFDVDSPKSVKEHS---FKLGRLHCFALD  427 (463)
T ss_pred             eEEeeecCCCC-CceeEEEeccCCcceEEecCCCCc-ceeeccccceEEEEeecCCCCccccccc---ccccceeecccC
Confidence            99999999875 778889999999999999988776 7888999999999999764332211111   011225577777


Q ss_pred             CCCC-EEEEeeCCCcEEEeeCCCCCcc
Q psy17188        405 PDGR-TLIVGGEASNLSIWDLASPTPR  430 (504)
Q Consensus       405 ~~g~-~l~~~~~dg~i~iwd~~~~~~~  430 (504)
                      |+-. .++.|+..+.+++||+.+....
T Consensus       428 ~~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  428 PDVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             CCcceEEEecCccceEEEeecccChhH
Confidence            7654 5778888888999999876543

>KOG4378|consensus

Probab=99.93  E-value=2e-23  Score=182.42  Aligned_cols=288  Identities=15%  Similarity=0.222  Sum_probs=213.7

Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE--eCCCcEEEEECCCC--e--EEEeecCCCCCeEEEE
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC--CSDGNIAVWDLHNQ--T--LVRQFQGHTDGASCID  252 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~iwd~~~~--~--~~~~~~~h~~~v~~~~  252 (504)
                      ....+++||+...+.............+.+++|+.... |+++  +.|..+++|.-...  +  .+....+  ..-.|++
T Consensus        10 ~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d~~~Cv~   86 (673)
T KOG4378|consen   10 TGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--DNAFCVA   86 (673)
T ss_pred             cCCceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeecccc--chHHHHh
Confidence            34579999998765443333333344589999987664 4444  45778899974322  1  1222222  2345555


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      ......++++|+..+.|+|||++...+               ......|...|+++.++....+|++++..|.|.+..+.
T Consensus        87 ~~s~S~y~~sgG~~~~Vkiwdl~~kl~---------------hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~  151 (673)
T KOG4378|consen   87 CASQSLYEISGGQSGCVKIWDLRAKLI---------------HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTK  151 (673)
T ss_pred             hhhcceeeeccCcCceeeehhhHHHHH---------------hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecc
Confidence            555568999999999999999996543               34456788999999999999999999999999999998


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC-CCEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLI  411 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~~l~  411 (504)
                      ++........ .....+.-+.+++..+. ++.+++.+|.|.+||+..........    ..|..+...++|+|. ..+|+
T Consensus       152 t~~~tt~f~~-~sgqsvRll~ys~skr~-lL~~asd~G~VtlwDv~g~sp~~~~~----~~HsAP~~gicfspsne~l~v  225 (673)
T KOG4378|consen  152 TKQKTTTFTI-DSGQSVRLLRYSPSKRF-LLSIASDKGAVTLWDVQGMSPIFHAS----EAHSAPCRGICFSPSNEALLV  225 (673)
T ss_pred             cCccccceec-CCCCeEEEeecccccce-eeEeeccCCeEEEEeccCCCcccchh----hhccCCcCcceecCCccceEE
Confidence            8743332222 22335678999998886 78889999999999998654433332    357788889999995 55778


Q ss_pred             EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC-cceEEEEeecCCceEEEEEc
Q psy17188        412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~s  490 (504)
                      +.+.|..|.+||+...........   ..+...++|.++|.+|+.|...|.|..||++. ..++..+..|...|++++|-
T Consensus       226 sVG~Dkki~~yD~~s~~s~~~l~y---~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq  302 (673)
T KOG4378|consen  226 SVGYDKKINIYDIRSQASTDRLTY---SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQ  302 (673)
T ss_pred             EecccceEEEeecccccccceeee---cCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEee
Confidence            889999999999986544333332   33567789999999999999999999999986 45688999999999999997


Q ss_pred             cCC
Q psy17188        491 ADG  493 (504)
Q Consensus       491 ~d~  493 (504)
                      +.-
T Consensus       303 ~s~  305 (673)
T KOG4378|consen  303 PSP  305 (673)
T ss_pred             ecc
Confidence            753

>KOG2919|consensus

Probab=99.92  E-value=6e-23  Score=170.00  Aligned_cols=275  Identities=15%  Similarity=0.209  Sum_probs=204.5

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCC------------eEEEeec-CCCCCeEEEEEc-------cCCCEEEEEcC
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQ------------TLVRQFQ-GHTDGASCIDIS-------ADGTKLWTGGL  265 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~------------~~~~~~~-~h~~~v~~~~~~-------~~~~~l~s~~~  265 (504)
                      ...+.|+|||..|++-+.|..+.+|++...            +....++ .....|...+|-       |+.+++++.+.
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr  131 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR  131 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence            446789999999999999999999998532            0111111 134567777775       56779999999


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC---ceEEEEEcCCCCEEEEEeCCCcEEEEeC-CCCCccceee
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLPDGRTLIVGGEASNLSIWDL-ASPTPRIKAE  341 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~v~d~-~~~~~~~~~~  341 (504)
                      |.-|.+||.-+|+++.             ......|..   ...+++|+|||..|++|. ...|++||+ +.+.......
T Consensus       132 ~~PIh~wdaftG~lra-------------Sy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~  197 (406)
T KOG2919|consen  132 DQPIHLWDAFTGKLRA-------------SYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYT  197 (406)
T ss_pred             cCceeeeecccccccc-------------chhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchh
Confidence            9999999999998642             222222322   346899999999999884 578999999 4443332222


Q ss_pred             ec-----cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-
Q psy17188        342 LT-----SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-  415 (504)
Q Consensus       342 ~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-  415 (504)
                      ..     +..+.+.+++++|-... .++.++....+-||.-........     ...|.+.|+.+.|.++|+.|++|.. 
T Consensus       198 t~~~~k~gq~giisc~a~sP~~~~-~~a~gsY~q~~giy~~~~~~pl~l-----lggh~gGvThL~~~edGn~lfsGaRk  271 (406)
T KOG2919|consen  198 TVTKGKFGQKGIISCFAFSPMDSK-TLAVGSYGQRVGIYNDDGRRPLQL-----LGGHGGGVTHLQWCEDGNKLFSGARK  271 (406)
T ss_pred             hhhcccccccceeeeeeccCCCCc-ceeeecccceeeeEecCCCCceee-----ecccCCCeeeEEeccCcCeecccccC
Confidence            22     33668899999998765 788899888888887665433222     2378999999999999999999875 


Q ss_pred             CCcEEEeeCCCCCcceeecccCCCC-cee--EEEECCCCCEEEEeeCCCcEEEEEcCC-cceEEEEeecCCceEEEEEcc
Q psy17188        416 ASNLSIWDLASPTPRIKAELTSSAP-ACY--ALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~~~~~~~-~v~--~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      +..|..||++.... .+..+..|.. .-.  -....|++++|++|+.||.|++||+++ +..+..+..|+..++.++++|
T Consensus       272 ~dkIl~WDiR~~~~-pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP  350 (406)
T KOG2919|consen  272 DDKILCWDIRYSRD-PVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNP  350 (406)
T ss_pred             CCeEEEEeehhccc-hhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCc
Confidence            66799999986542 2334444433 222  235568999999999999999999998 777888888999999999999


Q ss_pred             CCCEEEEecC
Q psy17188        492 DGTKLWTGGL  501 (504)
Q Consensus       492 d~~~l~s~s~  501 (504)
                      --.++++++.
T Consensus       351 ~mpilatssG  360 (406)
T KOG2919|consen  351 IMPILATSSG  360 (406)
T ss_pred             ccceeeeccC
Confidence            9888888774

>KOG0267|consensus

Probab=99.92  E-value=6.5e-25  Score=200.10  Aligned_cols=233  Identities=23%  Similarity=0.427  Sum_probs=201.9

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .|...|.++..-..++.+++|+ |..+-+|.+.....     ...+.+|+.+|.++.|+++..+|++|+.+|+|++||++
T Consensus        26 ~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~-----i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDle  100 (825)
T KOG0267|consen   26 AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNA-----ITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLE  100 (825)
T ss_pred             hhhhhhceeeeeccceeeccCCCceeeccccccCCch-----hheeeccCCcceeeecCcchhhhcccccCCceeeeehh
Confidence            6888999999877889999999 88888999865432     22345899999999999999999999999999999999


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      ..+  ....+.+|...+..+.|+|-+.+.+.|+.|+.+++||.+...+.+.+.+|...+..+.|+|+|+++++++.|.++
T Consensus       101 eAk--~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tv  178 (825)
T KOG0267|consen  101 EAK--IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTV  178 (825)
T ss_pred             hhh--hhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCccee
Confidence            544  466899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ++||...|++               ...+..|...+..+.|+|..-.++.|+.|+++++||+++.  ..+.........|
T Consensus       179 ki~d~~agk~---------------~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf--e~I~s~~~~~~~v  241 (825)
T KOG0267|consen  179 KIWDLTAGKL---------------SKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF--EVISSGKPETDGV  241 (825)
T ss_pred             eeeccccccc---------------ccccccccccccccccCchhhhhccCCCCceeeeecccee--EEeeccCCccCCc
Confidence            9999999885               3344568888999999999999999999999999999875  3344444456789


Q ss_pred             eeEEECCCCCCceeeeccCC
Q psy17188        350 YALAISPDSKSPFFSSHHYK  369 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~  369 (504)
                      .+.+|+|++.  .+.+|...
T Consensus       242 ~~~~fn~~~~--~~~~G~q~  259 (825)
T KOG0267|consen  242 RSLAFNPDGK--IVLSGEQI  259 (825)
T ss_pred             eeeeecCCce--eeecCchh
Confidence            9999999998  56666443

>KOG2919|consensus

Probab=99.92  E-value=5.8e-23  Score=170.07  Aligned_cols=282  Identities=17%  Similarity=0.234  Sum_probs=206.7

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccc-----------cce--eeecCCCcEEEEEEc-------CCCcEEEEe
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHA-----------RQI--NTLSHGEVVCAVTIS-------NPTKYVYTG  131 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~h~~~V~~v~~s-------~~~~~l~~~  131 (504)
                      .-.....|||||..+.....++.+-.|++|...           ...  ......+.|..-+|-       |+..+++++
T Consensus        50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s  129 (406)
T KOG2919|consen   50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS  129 (406)
T ss_pred             hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence            345667899999999999999988887775432           111  112345667766654       677788887


Q ss_pred             c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC-CCccceeee-----ecCcC
Q psy17188        132 G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAEL-----TSSAP  204 (504)
Q Consensus       132 ~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~-----~~~~~  204 (504)
                      + +.-|++||.-+++.............-..-.+++|+|||.+|++| ....|+++|+.. +........     .+..+
T Consensus       130 sr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~g  208 (406)
T KOG2919|consen  130 SRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKG  208 (406)
T ss_pred             cccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccc
Confidence            7 999999999998766655544332333445689999999999987 568999999943 322212222     23366


Q ss_pred             ceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEE
Q psy17188        205 ACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVW  282 (504)
Q Consensus       205 ~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~  282 (504)
                      .|.+++|+| +.+.++.++....+-|+.-..+.++..+-+|.+.|+.++|.++|+.|++|.+ |-.|..||++...-.+|
T Consensus       209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~  288 (406)
T KOG2919|consen  209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVY  288 (406)
T ss_pred             eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhh
Confidence            789999999 4559999999999999999999999999999999999999999999999986 67899999997664444


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                      .+....           ...+.-.-+...|++++|++|+.+|.|++||++..- .....+..+...+..++++|--.  +
T Consensus       289 ~L~rhv-----------~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~g-n~~sv~~~~sd~vNgvslnP~mp--i  354 (406)
T KOG2919|consen  289 ALERHV-----------GDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLG-NEVSVTGNYSDTVNGVSLNPIMP--I  354 (406)
T ss_pred             hhhhhc-----------cCccceEEEecCCCCceeeccCCCccEEEEecCCCC-CcccccccccccccceecCcccc--e
Confidence            322211           111122235567899999999999999999998732 23455566677889999999855  5


Q ss_pred             eeeccC
Q psy17188        363 FSSHHY  368 (504)
Q Consensus       363 ~~~~~~  368 (504)
                      +++++.
T Consensus       355 latssG  360 (406)
T KOG2919|consen  355 LATSSG  360 (406)
T ss_pred             eeeccC
Confidence            666544

>KOG1538|consensus

Probab=99.92  E-value=3.6e-22  Score=180.77  Aligned_cols=274  Identities=14%  Similarity=0.197  Sum_probs=211.4

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  194 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  194 (504)
                      .|..++|-|||.-|+.+.+..+.+||...+....+++     +|++.|.|++|+.||+.+|+|+.|..|.+|+..-.   
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLK-----gHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE---   85 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLK-----GHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE---   85 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccccccc-----cccceEEEEEEccCCceeccCCCceeEEEeccccc---
Confidence            7899999999999988888999999999887666555     89999999999999999999999999999986432   


Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                       -..-..|.+.|.|+.|+|-...|++++-+ ..-+|..+.... ...+ ....+.+++|..||.+++.|-.||+|.+-+-
T Consensus        86 -G~LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V-~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk  161 (1081)
T KOG1538|consen   86 -GILKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV-SKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNK  161 (1081)
T ss_pred             -ceeeeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhH-Hhhh-hheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence             12234789999999999998899988764 578898665432 2222 3567889999999999999999999998764


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-----CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-----RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ...+-..             .....+...+|.+++|+|..     ..+++.....++.+|.+....   ...-..-.-..
T Consensus       162 ~gEek~~-------------I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~---Igk~r~L~FdP  225 (1081)
T KOG1538|consen  162 NGEEKVK-------------IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQ---IGKDRALNFDP  225 (1081)
T ss_pred             CCCcceE-------------EeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEeccee---ecccccCCCCc
Confidence            4332111             11223456789999999953     578888888888888876532   22122223366


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      .++.+.++|.  ++..|+.|+.+.+|..+.-      ..-.....+.+|..++..|++++++.|+.||+|-.|++
T Consensus       226 ~CisYf~NGE--y~LiGGsdk~L~~fTR~Gv------rLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl  292 (1081)
T KOG1538|consen  226 CCISYFTNGE--YILLGGSDKQLSLFTRDGV------RLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL  292 (1081)
T ss_pred             hhheeccCCc--EEEEccCCCceEEEeecCe------EEeeccccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence            7899999999  8889999999999975431      11112235678999999999999999999999998875

>KOG0302|consensus

Probab=99.92  E-value=7.3e-23  Score=172.88  Aligned_cols=258  Identities=18%  Similarity=0.314  Sum_probs=198.9

Q ss_pred             ccceeeeecCcCceEEEEECCCC--CEEEEEeCCCcEEEEECCC----------------CeEEEeecCCCCCeEEEEEc
Q psy17188        193 PRIKAELTSSAPACYALAISPDS--KVCFSCCSDGNIAVWDLHN----------------QTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~iwd~~~----------------~~~~~~~~~h~~~v~~~~~~  254 (504)
                      +........|.+.+..+.-++-+  .+.++-+..|.|+||++..                .+.+.++.+|...=+.++|+
T Consensus       141 P~~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWS  220 (440)
T KOG0302|consen  141 PQIEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWS  220 (440)
T ss_pred             ccccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecc
Confidence            44445556677777777776643  4677778899999999853                25678889999999999999


Q ss_pred             c-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCC
Q psy17188        255 A-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       255 ~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~  332 (504)
                      | ....|++|..-+.|++|...++..++-            ......|...|..++|||. ...|++++.||+|+|||++
T Consensus       221 p~~~g~LlsGDc~~~I~lw~~~~g~W~vd------------~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiR  288 (440)
T KOG0302|consen  221 PIKTGRLLSGDCVKGIHLWEPSTGSWKVD------------QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIR  288 (440)
T ss_pred             cccccccccCccccceEeeeeccCceeec------------CccccccccchhhhccCCccCceEEeeecCceEEEEEec
Confidence            9 233688998889999999999875431            3445568899999999995 4678899999999999999


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC-CCEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLI  411 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~~l~  411 (504)
                      .+........+.|...|..+.|+....  ++++|+.||+++|||+++-+...++..++  .|..+|+++.|+|. ...|+
T Consensus       289 s~~~~~~~~~kAh~sDVNVISWnr~~~--lLasG~DdGt~~iwDLR~~~~~~pVA~fk--~Hk~pItsieW~p~e~s~ia  364 (440)
T KOG0302|consen  289 SGPKKAAVSTKAHNSDVNVISWNRREP--LLASGGDDGTLSIWDLRQFKSGQPVATFK--YHKAPITSIEWHPHEDSVIA  364 (440)
T ss_pred             CCCccceeEeeccCCceeeEEccCCcc--eeeecCCCceEEEEEhhhccCCCcceeEE--eccCCeeEEEeccccCceEE
Confidence            987777777799999999999998887  89999999999999999876665555444  68899999999994 45788


Q ss_pred             EeeCCCcEEEeeCCCCCc----------------ceeecccCCCCceeEEEECCC-CCEEEEeeCCCcEEEEE
Q psy17188        412 VGGEASNLSIWDLASPTP----------------RIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~----------------~~~~~~~~~~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd  467 (504)
                      +++.|.+|.|||+.-..-                ......+.....+..+.|++. ..+|++.+.|| +.||.
T Consensus       365 asg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  365 ASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             eccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence            889999999999853211                011122223445667788885 45777888888 55554

>KOG0302|consensus

Probab=99.92  E-value=2.2e-23  Score=175.98  Aligned_cols=254  Identities=15%  Similarity=0.213  Sum_probs=182.4

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCC-----CCccccceeee-cCCCcEEEEEEcCC-CcEEEEec-CCeEEEEeCCC
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPG-----IPRHARQINTL-SHGEVVCAVTISNP-TKYVYTGG-KGCVKVWDISQ  143 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~h~~~V~~v~~s~~-~~~l~~~~-d~~i~vw~~~~  143 (504)
                      ..+++..|+-.|++......+-...+..     .....+++.++ +|...=++++|||- .-.|++|. -+.|++|...+
T Consensus       164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST  243 (440)
T ss_pred             CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence            4455666666665554444332211111     12456777888 89999999999992 22355565 78999999888


Q ss_pred             CCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe
Q psy17188        144 PGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  222 (504)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  222 (504)
                      +.  -.+....+.+|...|..++||| ....|++|+.||+|+|||++.+........+.|...|+.|.|+.+-.+|++|+
T Consensus       244 g~--W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~  321 (440)
T KOG0302|consen  244 GS--WKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGG  321 (440)
T ss_pred             Cc--eeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecC
Confidence            53  2333344457999999999999 45688999999999999999886655666689999999999999888999999


Q ss_pred             CCCcEEEEECCC---CeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCce----EEEeecCCCCCCCcc
Q psy17188        223 SDGNIAVWDLHN---QTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCV----KVWDISQPGSKTPVS  294 (504)
Q Consensus       223 ~dg~i~iwd~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~----~~~~~~~~~~~~~~~  294 (504)
                      .||+++|||+++   ++.+..|+-|..+|+++.|+| +...|++++.|.+|.+||+....-    ....... ....+..
T Consensus       322 DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~-L~dlPpQ  400 (440)
T KOG0302|consen  322 DDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEG-LQDLPPQ  400 (440)
T ss_pred             CCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccc-hhcCCce
Confidence            999999999985   578889999999999999999 456889999999999999874321    0000000 0111222


Q ss_pred             cceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEE
Q psy17188        295 QLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIW  329 (504)
Q Consensus       295 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~  329 (504)
                      .+........+..+.|+++- .++++.+.|| +.||
T Consensus       401 LLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVf  435 (440)
T KOG0302|consen  401 LLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVF  435 (440)
T ss_pred             eEEEecchhHhhhheeccCCCCeEEEecccc-eeEE
Confidence            33344456778999999964 4566666666 3444

>KOG1963|consensus

Probab=99.91  E-value=2.5e-21  Score=181.26  Aligned_cols=361  Identities=18%  Similarity=0.223  Sum_probs=255.4

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCC---CEEEEecCCCcEEEEeCCCCCc-
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLSIWDLASPTP-  193 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~iw~~~~~~~-  193 (504)
                      .-.||+|+++++...+..|+||...++.+...+.     .|..++..+.+.|..   .++.+++.||.|++||...+.. 
T Consensus        21 ~avfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~-----~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Ll   95 (792)
T KOG1963|consen   21 PAVFSNDAKFLFLCTGNFVKVYSTATGECITSLE-----DHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELL   95 (792)
T ss_pred             ccccccCCcEEEEeeCCEEEEEecchHhhhhhcc-----cccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEE
Confidence            3468999999999999999999999987665333     789999999999854   4677899999999999733210 


Q ss_pred             --------------------------------------------------------------------cce---------
Q psy17188        194 --------------------------------------------------------------------RIK---------  196 (504)
Q Consensus       194 --------------------------------------------------------------------~~~---------  196 (504)
                                                                                          ...         
T Consensus        96 kt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~  175 (792)
T KOG1963|consen   96 KTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFK  175 (792)
T ss_pred             EEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEE
Confidence                                                                                000         


Q ss_pred             ----------e-------------eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEeecCCCCCeE
Q psy17188        197 ----------A-------------ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----QTLVRQFQGHTDGAS  249 (504)
Q Consensus       197 ----------~-------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~  249 (504)
                                .             .-..|.-.+++.+++|++++++++..||.|.+|.--.    ....+.+.-|...|.
T Consensus       176 ~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~  255 (792)
T KOG1963|consen  176 GIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVN  255 (792)
T ss_pred             EEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccc
Confidence                      0             0012344468899999999999999999999996322    233455667999999


Q ss_pred             EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                      ++.|+++|.+|++|+..|.+.+|.+.+++                ......-...|..+.++||+.+.++...|..|.+.
T Consensus       256 ~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~----------------kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li  319 (792)
T KOG1963|consen  256 SLSFSSDGAYLLSGGREGVLVLWQLETGK----------------KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLI  319 (792)
T ss_pred             eeEEecCCceEeecccceEEEEEeecCCC----------------cccccccCCeeEEEEEcCCCCeEEEEecCceEEEE
Confidence            99999999999999999999999999987                22233456789999999999999999999999998


Q ss_pred             eCCCCCccceee---------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC-----
Q psy17188        330 DLASPTPRIKAE---------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD-----  395 (504)
Q Consensus       330 d~~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~-----  395 (504)
                      ...+...+....         ......-.+.+++.|..+  .++-.+..+.|++||+.+......+.......+.     
T Consensus       320 ~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~--~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~  397 (792)
T KOG1963|consen  320 KASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN--SLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNI  397 (792)
T ss_pred             eccchhhhhhccCccCCCccccccccccceeEEEcCCCC--ceeecCCCceEEEEeccccceeeeEEEEeecccCCccee
Confidence            775432211110         111233456778888444  5777788999999999876555444433332222     


Q ss_pred             -CceEEEEEcCCCCEEEEee--------CCC--cEEEeeCCCCCcceee---cccCCCCceeEEEEC-CCCC-EEEEeeC
Q psy17188        396 -NYIRSVKLLPDGRTLIVGG--------EAS--NLSIWDLASPTPRIKA---ELTSSAPACYALAIS-PDSK-VCFSCCS  459 (504)
Q Consensus       396 -~~i~~~~~s~~g~~l~~~~--------~dg--~i~iwd~~~~~~~~~~---~~~~~~~~v~~l~~s-~~~~-~l~s~~~  459 (504)
                       -.++.++.+..|.++++.-        .||  .+++|-......-...   ....|...+...++. +... .+++++.
T Consensus       398 ~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~  477 (792)
T KOG1963|consen  398 QVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASV  477 (792)
T ss_pred             EEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEecc
Confidence             3477888888899999863        233  4788876644332221   123344444444443 3333 8999999


Q ss_pred             CCcEEEEEcCCcc----------eEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        460 DGNIAVWDLHNQT----------LVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       460 dg~i~iwd~~~~~----------~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ||.++||-+.+.+          +...-.-|..++++++|+.||..|+.+-+
T Consensus       478 dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~  529 (792)
T KOG1963|consen  478 DGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFD  529 (792)
T ss_pred             CCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecC
Confidence            9999999883321          22212237889999999999976665543

>KOG1034|consensus

Probab=99.91  E-value=7.1e-23  Score=169.93  Aligned_cols=310  Identities=18%  Similarity=0.245  Sum_probs=218.0

Q ss_pred             CCCCceEEEEEcc-----CCCEEEEecCCCcEEEEeCCCCCcc--ceeee-ecCcCceEEEEECCC----CCEEEEEeCC
Q psy17188        157 QRDNYIRSVKLLP-----DGRTLIVGGEASNLSIWDLASPTPR--IKAEL-TSSAPACYALAISPD----SKVCFSCCSD  224 (504)
Q Consensus       157 ~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~-~~~~~~v~~~~~s~~----~~~l~~~~~d  224 (504)
                      .|..+|..++|++     +...+++.+ ...+.+|........  ..... ..|......++|+-+    ..++|+++.-
T Consensus        36 d~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~  114 (385)
T KOG1034|consen   36 DHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL  114 (385)
T ss_pred             cCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence            5778899999985     234455554 467889987653311  11111 236667788888763    3489999999


Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      |.|+|.|+.++++...+.+|...|+.+.++|+ .++++++|.|..|++|++++..+...            .-...+|.+
T Consensus       115 GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~V------------fGG~egHrd  182 (385)
T KOG1034|consen  115 GVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAV------------FGGVEGHRD  182 (385)
T ss_pred             eEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEE------------ecccccccC
Confidence            99999999999999999999999999999995 46899999999999999999876432            223457899


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      .|.++.|+++|.++++++.|.++++|++..++.....+        .+..|+|++...-+-+-    ...+.+..     
T Consensus       183 eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE--------~s~~~~~~~t~~pfpt~----~~~fp~fs-----  245 (385)
T KOG1034|consen  183 EVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLE--------LSITYSPNKTTRPFPTP----KTHFPDFS-----  245 (385)
T ss_pred             cEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhh--------hhcccCCCCccCcCCcc----cccccccc-----
Confidence            99999999999999999999999999998653222111        12445555442111110    01111111     


Q ss_pred             CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCc-----------ceeecccCCCCceeE--EEECC
Q psy17188        384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTP-----------RIKAELTSSAPACYA--LAISP  449 (504)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~-----------~~~~~~~~~~~~v~~--l~~s~  449 (504)
                            ...-|..+|-|+.|-  |.++++-+-++.|..|... -.+.           .....+.-....++-  .+|.|
T Consensus       246 ------t~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~  317 (385)
T KOG1034|consen  246 ------TTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDP  317 (385)
T ss_pred             ------ccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecH
Confidence                  223477778888886  5788888888999999872 1111           011112222333443  45667


Q ss_pred             CCCEEEEeeCCCcEEEEEcCCcceE--EEEeec--CCceEEEEEccCCCEEEEecCCCC
Q psy17188        450 DSKVCFSCCSDGNIAVWDLHNQTLV--RQFQGH--TDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       450 ~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~h--~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      -+++||.|...|.|++||+++.+..  .++..+  ...|...+|+.|+..|+...+|+|
T Consensus       318 ~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~  376 (385)
T KOG1034|consen  318 WQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGT  376 (385)
T ss_pred             HHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCc
Confidence            7899999999999999999887652  233322  346999999999999999999986

>KOG1538|consensus

Probab=99.91  E-value=1.2e-22  Score=183.97  Aligned_cols=277  Identities=18%  Similarity=0.311  Sum_probs=218.5

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  240 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~  240 (504)
                      .|..++|-|||..|+.+. +..+.+||...+.  ....+++|.+.|+|++|+.||+.+++|+.|..|.+|+-+-... -.
T Consensus        14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~--llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~-Lk   89 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGT--LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI-LK   89 (1081)
T ss_pred             chheeEECCCCceEEEec-CCEEEEEeCCCcc--cccccccccceEEEEEEccCCceeccCCCceeEEEecccccce-ee
Confidence            799999999999988875 5689999999776  4778999999999999999999999999999999998553322 22


Q ss_pred             ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      +. |...|.|+.|+|-...|++++.. ..-+|......+                 ........+.+.+|..||++++.|
T Consensus        90 YS-H~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V-----------------~K~kss~R~~~CsWtnDGqylalG  150 (1081)
T KOG1538|consen   90 YS-HNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV-----------------SKHKSSSRIICCSWTNDGQYLALG  150 (1081)
T ss_pred             ec-cCCeeeEeecCchHHHhhhcchh-hccccChhhhhH-----------------HhhhhheeEEEeeecCCCcEEEEe
Confidence            33 99999999999988889988754 456787765532                 223345668899999999999999


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC---CceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK---SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      -.+|+|.+-+-...+........+...+|.+++|+|...   ...++......++.+|.+......+ ...     -+-.
T Consensus       151 ~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk-~r~-----L~Fd  224 (1081)
T KOG1538|consen  151 MFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGK-DRA-----LNFD  224 (1081)
T ss_pred             ccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecc-ccc-----CCCC
Confidence            999999998765554455555566788999999999753   3467777888888888876432111 111     1223


Q ss_pred             eEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ..|+.+.++|.++..|+.|+.+++|--+   .+..-........|+.++..|++++++.|+.||+|-.|++.
T Consensus       225 P~CisYf~NGEy~LiGGsdk~L~~fTR~---GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  225 PCCISYFTNGEYILLGGSDKQLSLFTRD---GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             chhheeccCCcEEEEccCCCceEEEeec---CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            4489999999999999999999999643   24455555577789999999999999999999999999863

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.91  E-value=1.6e-19  Score=173.99  Aligned_cols=388  Identities=25%  Similarity=0.428  Sum_probs=283.5

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCC-CcEEEEEE-cCCCc-EEEE-ec-CCeEEEEeCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHG-EVVCAVTI-SNPTK-YVYT-GG-KGCVKVWDISQP  144 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~V~~v~~-s~~~~-~l~~-~~-d~~i~vw~~~~~  144 (504)
                      ...+....+.+.+........+..+..|........+..+ ++. ..+..+.+ ++++. +++. +. |+.+.+|+....
T Consensus        65 ~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  144 (466)
T COG2319          65 EDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTP  144 (466)
T ss_pred             cceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCC
Confidence            6678899999998877777777778877776665455555 433 47777777 78777 4444 34 899999998751


Q ss_pred             CCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC-EEEEEe
Q psy17188        145 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCC  222 (504)
Q Consensus       145 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~  222 (504)
                          .........|...|..++|+|+++.+++++. |+.+++|+.....  ....+..|...|.+++|+|++. .+++++
T Consensus       145 ----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  218 (466)
T COG2319         145 ----GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK--PLSTLAGHTDPVSSLAFSPDGGLLIASGS  218 (466)
T ss_pred             ----CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc--eEEeeccCCCceEEEEEcCCcceEEEEec
Confidence                1122333478999999999999999998885 9999999998633  3556677999999999999998 555558


Q ss_pred             CCCcEEEEECCCCeEEE-eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        223 SDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      .|+.|++||...+..+. .+.+|.... ...|++++..+++++.|+.+++|+.........            ..  ..|
T Consensus       219 ~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~------------~~--~~~  283 (466)
T COG2319         219 SDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLR------------TL--SGH  283 (466)
T ss_pred             CCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEE------------EE--ecC
Confidence            99999999999888888 688888876 448999998899999999999999987653110            11  455


Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      ...+.++.|+|++..+++++.|+.+.+|+..............+...+..+.+ ......+...+..++.+.+|+.....
T Consensus       284 ~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~  362 (466)
T COG2319         284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGK  362 (466)
T ss_pred             CccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecCCCc
Confidence            78899999999888888898888899998877643333332355557888888 43212244444677899999988754


Q ss_pred             CCCcccccccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                         ....   ......+..+.+.+ ...+.. +..++.+.+|+..............  ..+....+++++..+++++.+
T Consensus       363 ---~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  433 (466)
T COG2319         363 ---PLKT---LEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT--SRVTSLDFSPDGKSLASGSSD  433 (466)
T ss_pred             ---eeEE---ecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCC--CcEEEEEECCCCcEEEEecCC
Confidence               1111   11122277889988 544444 6788999999998765433322221  678889999999999999999


Q ss_pred             CcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        461 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       461 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      +.+++|+..+ .. ..          ..+.++.........
T Consensus       434 ~~~~~~~~~~-~~-~~----------~~~~~~~~~~~~~~~  462 (466)
T COG2319         434 NTIRLWDLKT-SL-KS----------VSFSPDGKVLASKSS  462 (466)
T ss_pred             CcEEEEeccC-cE-EE----------EEECCCCcEEEeccc
Confidence            9999999988 11 11          566666666555443

>KOG0307|consensus

Probab=99.91  E-value=1.9e-23  Score=200.62  Aligned_cols=290  Identities=22%  Similarity=0.335  Sum_probs=214.8

Q ss_pred             EEEEEccCCC-EEEEe----------cCCCcEEEEeCCCCCcc----ceeeeecCcCceEEEEECCCCCE----EEEEeC
Q psy17188        163 RSVKLLPDGR-TLIVG----------GEASNLSIWDLASPTPR----IKAELTSSAPACYALAISPDSKV----CFSCCS  223 (504)
Q Consensus       163 ~~~~~s~~~~-~l~~~----------~~dg~i~iw~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~----l~~~~~  223 (504)
                      ..++|+|++. ++++|          +.+.++.||.+......    ....+ ......+.++|.+.+..    |+.|.+
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~-~s~~rF~kL~W~~~g~~~~GlIaGG~e   88 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSL-QSSNRFNKLAWGSYGSHSHGLIAGGLE   88 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccc-cccccceeeeecccCCCccceeecccc
Confidence            3578999876 55554          23556677765533222    11112 22345788999987664    888999


Q ss_pred             CCcEEEEECCCC------eEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccc
Q psy17188        224 DGNIAVWDLHNQ------TLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQL  296 (504)
Q Consensus       224 dg~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  296 (504)
                      ||.|.+||...-      ..+.+...|.+.|..+.|++. +++|++|+.||.|.|||+..-+.            +. ..
T Consensus        89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~t------------P~-~~  155 (1049)
T KOG0307|consen   89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPET------------PF-TP  155 (1049)
T ss_pred             CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCC------------CC-CC
Confidence            999999998652      345667789999999999995 55999999999999999987542            11 11


Q ss_pred             eecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEE
Q psy17188        297 DCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVK  373 (504)
Q Consensus       297 ~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~  373 (504)
                      ......+.|.+++|+.. ...|++++.+|.+.|||++..+.............+..++|+|+....++++...|+  .|.
T Consensus       156 ~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviq  235 (1049)
T KOG0307|consen  156 GSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQ  235 (1049)
T ss_pred             CCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeE
Confidence            12335677999999984 456788888999999999988555554444444568899999999885665555544  699


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                      +||++......  +.+  ..|...|.++.|++.+ ++|++++.|+.|.+|+.++++.+  ..+......+..+.|+|...
T Consensus       236 lWDlR~assP~--k~~--~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl--~~~p~~~nW~fdv~w~pr~P  309 (1049)
T KOG0307|consen  236 LWDLRFASSPL--KIL--EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVL--GELPAQGNWCFDVQWCPRNP  309 (1049)
T ss_pred             eecccccCCch--hhh--cccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEe--eecCCCCcceeeeeecCCCc
Confidence            99998643322  222  4688899999999966 88999999999999999987644  44555677899999999665


Q ss_pred             -EEEEeeCCCcEEEEEcCCcc
Q psy17188        453 -VCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       453 -~l~s~~~dg~i~iwd~~~~~  472 (504)
                       .++.++-||.|-||.+.+..
T Consensus       310 ~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  310 SVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             chhhhheeccceeeeeeecCC
Confidence             77888999999999987654

>KOG0307|consensus

Probab=99.90  E-value=5.9e-23  Score=197.29  Aligned_cols=258  Identities=16%  Similarity=0.313  Sum_probs=200.2

Q ss_pred             cceeeecCCCcEEEEEEcCCCcE----EEEec-CCeEEEEeCCCC---CCCCceeeeeecCCCCceEEEEEccCC-CEEE
Q psy17188        105 RQINTLSHGEVVCAVTISNPTKY----VYTGG-KGCVKVWDISQP---GSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLI  175 (504)
Q Consensus       105 ~~~~~~~h~~~V~~v~~s~~~~~----l~~~~-d~~i~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~  175 (504)
                      +.+..+.-......++|.+.+..    ||.|. ||.|.+||...-   .....+.  ....|.+.|..+.|++.. ++||
T Consensus        56 k~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la--~~~~h~G~V~gLDfN~~q~nlLA  133 (1049)
T KOG0307|consen   56 KPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLA--TKSKHTGPVLGLDFNPFQGNLLA  133 (1049)
T ss_pred             cccccccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHh--hhcccCCceeeeeccccCCceee
Confidence            44555566677889999986655    66666 999999998762   2222222  334799999999999955 4999


Q ss_pred             EecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCC--CeEEEE
Q psy17188        176 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD--GASCID  252 (504)
Q Consensus       176 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~  252 (504)
                      +|+.||.|.|||+...+......-....+.|.+++|+.. ...|++++.+|.+.|||++..+.+-.+..+.+  .+..++
T Consensus       134 SGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~  213 (1049)
T KOG0307|consen  134 SGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLA  213 (1049)
T ss_pred             ccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeee
Confidence            999999999999987543322222234567999999874 45888999999999999999988877776654  478899


Q ss_pred             EccCCC-EEEEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEE
Q psy17188        253 ISADGT-KLWTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLS  327 (504)
Q Consensus       253 ~~~~~~-~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~  327 (504)
                      |+|+.. .|++++.|.   .|.+||++....            +  ......|...|.++.|++.+ ++|++++.|+.|.
T Consensus       214 WhP~~aTql~~As~dd~~PviqlWDlR~ass------------P--~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii  279 (1049)
T KOG0307|consen  214 WHPDHATQLLVASGDDSAPVIQLWDLRFASS------------P--LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRII  279 (1049)
T ss_pred             eCCCCceeeeeecCCCCCceeEeecccccCC------------c--hhhhcccccceeeeccCCCCchhhhcccCCCCee
Confidence            999754 666666654   699999886542            1  22225788899999999966 8899999999999


Q ss_pred             EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      +|+.+++  .....+......+..+.|+|.... +++..+.+|.|.||.+....
T Consensus       280 ~wN~~tg--Evl~~~p~~~nW~fdv~w~pr~P~-~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  280 CWNPNTG--EVLGELPAQGNWCFDVQWCPRNPS-VMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             EecCCCc--eEeeecCCCCcceeeeeecCCCcc-hhhhheeccceeeeeeecCC
Confidence            9999987  556667777789999999998876 78899999999999987654

>KOG0270|consensus

Probab=99.90  E-value=5.4e-22  Score=171.26  Aligned_cols=240  Identities=17%  Similarity=0.277  Sum_probs=185.1

Q ss_pred             CCcEEEEec-CCeEEEEeCCCCCCCCceeee----------------eecCCCCceEEEEEccC-CCEEEEecCCCcEEE
Q psy17188        124 PTKYVYTGG-KGCVKVWDISQPGSKTPVSQL----------------DCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSI  185 (504)
Q Consensus       124 ~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~----------------~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i  185 (504)
                      .|+++|.|. |..|.|||++-.....+...+                ...+|+..|.+++|+.+ .+.||+|+.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            478999999 999999998654333322222                12358888889999874 568899999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEE
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTG  263 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~  263 (504)
                      ||+.++++  ...+..|...|.++.|+| ...+|++|+.|++|.+.|.+........-...+.|-.++|.|. ...++++
T Consensus       271 WD~~~g~p--~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~  348 (463)
T KOG0270|consen  271 WDVDTGKP--KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVS  348 (463)
T ss_pred             EEcCCCCc--ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEe
Confidence            99998876  556678999999999999 4569999999999999999953222221125678999999984 4577888


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      ..||+|+-+|++...-.              ......|...|.++++++.- .++++++.++.+++|++...........
T Consensus       349 tddG~v~~~D~R~~~~~--------------vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~  414 (463)
T KOG0270|consen  349 TDDGTVYYFDIRNPGKP--------------VWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEH  414 (463)
T ss_pred             cCCceEEeeecCCCCCc--------------eeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccc
Confidence            89999999999986422              45556789999999999854 5688899999999999987665554444


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      ...-+...|+++.|+-.. .++.|+..+.+++||+.+.
T Consensus       415 ~~~~~rl~c~~~~~~~a~-~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  415 SFKLGRLHCFALDPDVAF-TLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             cccccceeecccCCCcce-EEEecCccceEEEeecccC
Confidence            444445778888888775 6777888889999998764

>KOG4227|consensus

Probab=99.89  E-value=2.4e-21  Score=164.67  Aligned_cols=303  Identities=15%  Similarity=0.223  Sum_probs=221.0

Q ss_pred             CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC----Cccceee-eecCcCceEEEEECCCCCEEEEEe
Q psy17188        148 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP----TPRIKAE-LTSSAPACYALAISPDSKVCFSCC  222 (504)
Q Consensus       148 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~  222 (504)
                      .++......+|.+.|+++.|+.++++|++|+.|..+++|+++..    .++.+.. -..|...|.|++|...+..+++|.
T Consensus        45 R~~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~  124 (609)
T KOG4227|consen   45 RPFCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGE  124 (609)
T ss_pred             cchhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCC
Confidence            44455556689999999999999999999999999999998631    1122222 234567899999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEeecCCC---CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQGHT---DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      .+++|...|+++.+.+..+. |.   +.|..+..+|-.+.|++.+.++.|.+||.+....            +...+...
T Consensus       125 ~~~~VI~HDiEt~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~------------~~~~~~~A  191 (609)
T KOG4227|consen  125 RWGTVIKHDIETKQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN------------PISLVLPA  191 (609)
T ss_pred             CcceeEeeecccceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC------------CCceeeec
Confidence            99999999999999888876 44   4899999999888999999999999999987541            11233333


Q ss_pred             ccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCcccee-----eeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        300 QRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKA-----ELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .......++.|+|.. .+|++.+..+-+.+||.+........     .++.....-.++.|+|+|.  .+.+-....+-.
T Consensus       192 N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~--Q~msiRR~~~P~  269 (609)
T KOG4227|consen  192 NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGN--QFMSIRRGKCPL  269 (609)
T ss_pred             CCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCC--eehhhhccCCCE
Confidence            445667889999955 66778888888999999876432221     1222222346788999998  455555556666


Q ss_pred             EEecCCCCCCCcccccc----cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc--------------------
Q psy17188        374 VWDISQPGSKTPVSQLD----CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--------------------  429 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~----~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~--------------------  429 (504)
                      +||+......  +....    ..-....+.+++|..|.. +++|+.+-.|++|.+.....                    
T Consensus       270 ~~D~~S~R~~--V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i  346 (609)
T KOG4227|consen  270 YFDFISQRCF--VLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFI  346 (609)
T ss_pred             Eeeeecccce--eEeccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhhee
Confidence            7777543211  11111    001122466788876654 99999999999998853210                    


Q ss_pred             -ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        430 -RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       430 -~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                       .....+.+|..-++.+.|+|...+|++.+-...++||.-
T Consensus       347 ~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  347 EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             cceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence             112346788888999999999999999999999999964

>KOG0290|consensus

Probab=99.89  E-value=1.5e-20  Score=153.62  Aligned_cols=297  Identities=14%  Similarity=0.182  Sum_probs=212.6

Q ss_pred             ceeeecCCCcEEEEEEcC---CCcEEEEec-----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCC-----C
Q psy17188        106 QINTLSHGEVVCAVTISN---PTKYVYTGG-----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-----R  172 (504)
Q Consensus       106 ~~~~~~h~~~V~~v~~s~---~~~~l~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-----~  172 (504)
                      .+....-.-.+.++.|+.   ...+||.|+     .+.|.|-.++..  ...+.....+.|.-+++.+.|.|+.     +
T Consensus        37 eiy~Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~--s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pd  114 (364)
T KOG0290|consen   37 EIYTYNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDED--SGELVEDANFDHPYPVTKLMWIPDSKGVYPD  114 (364)
T ss_pred             eEEEecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccC--CCceeccCCCCCCCCccceEecCCccccCcc
Confidence            344444446678888883   345677776     467888777632  2222223335799999999999976     3


Q ss_pred             EEEEecCCCcEEEEeCCCCC--ccceeee-----ecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCe---EEEee
Q psy17188        173 TLIVGGEASNLSIWDLASPT--PRIKAEL-----TSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQT---LVRQF  241 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~--~~~~~~~-----~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~  241 (504)
                      +||+++  ..+++|.+...+  ......+     ..+..++++..|+. +-+++.+++-|-+..|||++++.   ...++
T Consensus       115 lLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL  192 (364)
T KOG0290|consen  115 LLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL  192 (364)
T ss_pred             hhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE
Confidence            566654  479999987432  2222222     34566789999987 66799999999999999999863   46667


Q ss_pred             cCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEE
Q psy17188        242 QGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIV  319 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~  319 (504)
                      -.|...|..++|...+ ..+++.+.||.+|+||++..+....-.+.+            ....+...++|+++ -+++++
T Consensus       193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p------------~~~~pLlRLswnkqDpnymAT  260 (364)
T KOG0290|consen  193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDP------------SPSTPLLRLSWNKQDPNYMAT  260 (364)
T ss_pred             EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCC------------CCCCcceeeccCcCCchHHhh
Confidence            7899999999999854 478999999999999999865322111111            11455678889884 466666


Q ss_pred             EeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        320 GGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       320 ~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      -.. ...|.+.|++.+. ....++..|...|..++|.|.... .+.+++.|..+.+||+.+..........-....+.+|
T Consensus       261 f~~dS~~V~iLDiR~P~-tpva~L~~H~a~VNgIaWaPhS~~-hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EV  338 (364)
T KOG0290|consen  261 FAMDSNKVVILDIRVPC-TPVARLRNHQASVNGIAWAPHSSS-HICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEV  338 (364)
T ss_pred             hhcCCceEEEEEecCCC-cceehhhcCcccccceEecCCCCc-eeeecCCcceEEEEecccccccCCCCchhhhhcccee
Confidence            544 4569999999865 667889999999999999999887 7899999999999999876553333333333467889


Q ss_pred             EEEEEcC-CCCEEEEeeCCCcEEE
Q psy17188        399 RSVKLLP-DGRTLIVGGEASNLSI  421 (504)
Q Consensus       399 ~~~~~s~-~g~~l~~~~~dg~i~i  421 (504)
                      +.+.|++ ...+++++.. +.+.+
T Consensus       339 Nqi~Ws~~~~Dwiai~~~-kklei  361 (364)
T KOG0290|consen  339 NQIQWSSSQPDWIAICFG-KKLEI  361 (364)
T ss_pred             eeeeecccCCCEEEEEec-CeeeE
Confidence            9999996 5667777654 33443

>KOG1963|consensus

Probab=99.89  E-value=2.9e-20  Score=174.23  Aligned_cols=346  Identities=16%  Similarity=0.190  Sum_probs=244.3

Q ss_pred             EEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC--CCcc
Q psy17188        117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS--PTPR  194 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~  194 (504)
                      .++.+++.|.+....-+..+.+|...... ......-....|.-.+++.+++|+++++|++..||+|.+|.--.  ....
T Consensus       164 ~~I~~~~~ge~~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~  242 (792)
T KOG1963|consen  164 KSIVDNNSGEFKGIVHMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSE  242 (792)
T ss_pred             ccEEEcCCceEEEEEEeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccc
Confidence            56778888888877778889999987754 22222222235677799999999999999999999999997433  3333


Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....+.-|...|.+++|+++|.+|++|+..+.+.+|.+.+++ .+-+..-.++|..+.++||+...+....|+.|.+...
T Consensus       243 t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  243 TCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             cceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            456677888999999999999999999999999999999998 4556667889999999999999999999999999987


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc---------C
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS---------S  345 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~  345 (504)
                      .+.+.+.- +...  ..+. .-......+-.+.++++|.-+.++..+..|.|++||+.+.+.........         +
T Consensus       322 ~dl~~k~t-Isgi--~~~~-~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~  397 (792)
T KOG1963|consen  322 SDLEIKST-ISGI--KPPT-PSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNI  397 (792)
T ss_pred             cchhhhhh-ccCc--cCCC-ccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCccee
Confidence            65443210 0000  0000 00012234557889999977788888899999999998765443322211         1


Q ss_pred             CCceeeEEECCCCCCceeeecc--------C--CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CC-CEEEEe
Q psy17188        346 APACYALAISPDSKSPFFSSHH--------Y--KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DG-RTLIVG  413 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~--------~--~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g-~~l~~~  413 (504)
                      ...++.++.+-.+.  ++++..        .  .-.+++|..........+.......|+..+...++.+ .. ...+++
T Consensus       398 ~v~itav~~~~~gs--~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta  475 (792)
T KOG1963|consen  398 QVGITAVARSRFGS--WMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTA  475 (792)
T ss_pred             EEeeeeehhhccce--EEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEe
Confidence            12345555555555  454432        1  3458889887765555555555556776666666554 22 278899


Q ss_pred             eCCCcEEEeeCCCCCc--------ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        414 GEASNLSIWDLASPTP--------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       414 ~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +.||.+++|-+.+.+.        .+.....-|..++++++|+.||..|+. +.|+.|.+||..+.
T Consensus       476 ~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~-s~~~~Itiwd~~~~  540 (792)
T KOG1963|consen  476 SVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAV-SFDDTITIWDYDTK  540 (792)
T ss_pred             ccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEE-ecCCEEEEecCCCh
Confidence            9999999998843322        122223346778999999999976655 56788999999883

>KOG1188|consensus

Probab=99.89  E-value=3.2e-21  Score=161.12  Aligned_cols=280  Identities=15%  Similarity=0.259  Sum_probs=196.9

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEeCCCCCccceeeeecCc-
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-  203 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-  203 (504)
                      +++..+.|.|++||..+++....+.     ++...++.++|..  ....+.+++.||+|++||++............+. 
T Consensus        43 vav~lSngsv~lyd~~tg~~l~~fk-----~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~  117 (376)
T KOG1188|consen   43 VAVSLSNGSVRLYDKGTGQLLEEFK-----GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSG  117 (376)
T ss_pred             EEEEecCCeEEEEeccchhhhheec-----CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCC
Confidence            4444559999999999865444444     6778888899987  5678899999999999999987776666677666 


Q ss_pred             CceEEEEECCCCCEEEEEeC----CCcEEEEECCCCeE-EEee-cCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCC
Q psy17188        204 PACYALAISPDSKVCFSCCS----DGNIAVWDLHNQTL-VRQF-QGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~~-~~~~-~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~  276 (504)
                      .+..+++.+..++.+++|..    +-.|.+||++..+. +..+ ..|...|++++|+| +.++|++||.||.+.++|++.
T Consensus       118 ~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~  197 (376)
T KOG1188|consen  118 TPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK  197 (376)
T ss_pred             CcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence            45667777767778888764    66799999998765 5544 56999999999999 677999999999999999886


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc-------
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA-------  348 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~-------  348 (504)
                      ..            ..-..+....+...|..+.|..++ +.|.+-+..+...+|+++.+........+.....       
T Consensus       198 d~------------EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~  265 (376)
T KOG1188|consen  198 DN------------EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDN  265 (376)
T ss_pred             Cc------------chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhh
Confidence            42            111134455677789999999877 4588888999999999988764332222211000       


Q ss_pred             -eeeEE-ECCCCCCceeeeccCCCeEEEEecCC---CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        349 -CYALA-ISPDSKSPFFSSHHYKSCVKVWDISQ---PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       349 -i~~~~-~~~~~~~~~~~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                       -.-+. .+|.......+.+..-+...++-+..   +........ ....|..-|+++.|...+..+.+|++||.+.+|.
T Consensus       266 ~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~-l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk  344 (376)
T KOG1188|consen  266 CDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAI-LQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK  344 (376)
T ss_pred             hhheeecccCCCcceEEEeccccCceeEEEeeecccccccCcccc-ccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence             01111 23444443444444355555554432   222222211 1223566788899998999999999999999998


Q ss_pred             C
Q psy17188        424 L  424 (504)
Q Consensus       424 ~  424 (504)
                      .
T Consensus       345 ~  345 (376)
T KOG1188|consen  345 V  345 (376)
T ss_pred             c
Confidence            5

>KOG4497|consensus

Probab=99.89  E-value=7.2e-21  Score=158.19  Aligned_cols=363  Identities=13%  Similarity=0.140  Sum_probs=218.5

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccce
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIK  196 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~  196 (504)
                      -..|||+|+++|+..+..+.|-|.++-+.   .+.+   .--..|..+.|..|.-+++++ ..++.|.+|++...+  ..
T Consensus        13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~---~qlf---~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe--w~   84 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYRLVIRDSETLQL---HQLF---LCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPE--WY   84 (447)
T ss_pred             ceeECCCCCeeeeeeeeEEEEeccchhhH---HHHH---HHHHHhhheeeeccceeeeeeeeccceEEEEEeecce--eE
Confidence            35799999999999988999988776322   1111   223567888999988877665 567899999998544  46


Q ss_pred             eeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe-------
Q psy17188        197 AELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT-------  268 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~-------  268 (504)
                      ..+......+.+++|||||+ .|.+...+-.|.+|.+.+.+.... +-....+..++|+|||++.+.+++-..       
T Consensus        85 ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~  163 (447)
T KOG4497|consen   85 CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS  163 (447)
T ss_pred             EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHH
Confidence            66777788899999999996 555666788999999998765443 323456689999999998877664211       


Q ss_pred             -------------------EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        269 -------------------VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       269 -------------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                                         =.-|..+..-+.+|+...+-      .+......-.+..++|+|.+++|++|+.|+.+++.
T Consensus       164 ~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley------kv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvl  237 (447)
T KOG4497|consen  164 SCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY------KVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVL  237 (447)
T ss_pred             hhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh------eeeeeeeccceeEEEeccccceEEeeccchhhhhh
Confidence                               01122222222222211100      11112223446667777777777777777776665


Q ss_pred             eCCCCCccce----eeeccC-------------CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC-CCCccc-ccc
Q psy17188        330 DLASPTPRIK----AELTSS-------------APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG-SKTPVS-QLD  390 (504)
Q Consensus       330 d~~~~~~~~~----~~~~~~-------------~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~-~~~~~~-~~~  390 (504)
                      +--+-+....    ......             .-...++.|.|..-.   +.-. ...-.+|+..... ....++ ...
T Consensus       238 nh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~---a~~~-~~se~~YE~~~~pv~~~~lkp~tD  313 (447)
T KOG4497|consen  238 NHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLE---AHIW-EESETIYEQQMTPVKVHKLKPPTD  313 (447)
T ss_pred             ceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccc---cCcc-ccchhhhhhhhcceeeecccCCCC
Confidence            4332211100    000000             000112222222110   0000 0000011110000 000000 001


Q ss_pred             cccCCCceEEEEEcCCCCEEEEeeCC--CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        391 CLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      .......+.-++|++|..++++-.+.  +.+.+||++..+.-.+..   ...+|....|+|....|+.+.....+++|..
T Consensus       314 ~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi---Qk~piraf~WdP~~prL~vctg~srLY~W~p  390 (447)
T KOG4497|consen  314 FPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI---QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAP  390 (447)
T ss_pred             CCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh---hccceeEEEeCCCCceEEEEcCCceEEEEcC
Confidence            11123446689999999999987543  459999998655333322   3346889999999999998888888999998


Q ss_pred             CCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        469 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       469 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .....+..-. ..-.|..+.|..+|..++-.|.|.
T Consensus       391 sg~~~V~vP~-~GF~i~~l~W~~~g~~i~l~~kDa  424 (447)
T KOG4497|consen  391 SGPRVVGVPK-KGFNIQKLQWLQPGEFIVLCGKDA  424 (447)
T ss_pred             CCceEEecCC-CCceeeeEEecCCCcEEEEEcCCc
Confidence            7655554433 346799999999999999999883

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.89  E-value=1.2e-19  Score=166.72  Aligned_cols=280  Identities=16%  Similarity=0.304  Sum_probs=180.2

Q ss_pred             EEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-CCCcEEEEeCCC-CCccceeeeecCcCc
Q psy17188        128 VYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS-PTPRIKAELTSSAPA  205 (504)
Q Consensus       128 l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~-~~~~~~~~~~~~~~~  205 (504)
                      ++...++.|.+|++.+.+....+..+   ...+....++++|++++|++++ .++.|.+|+++. ++....... .....
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~---~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~   81 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVV---DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGS   81 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEE---ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCC
Confidence            33344999999999653322333333   3345677899999999987764 578899999973 222111211 12234


Q ss_pred             eEEEEECCCCCEEEEEeC-CCcEEEEECCCC----eEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCc-
Q psy17188        206 CYALAISPDSKVCFSCCS-DGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGC-  278 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~-  278 (504)
                      ...++|+|++++|++++. ++.|.+|++++.    +.+..+. +.....+++++|++++++++ ..++.|.+||+++.. 
T Consensus        82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~  160 (330)
T PRK11028         82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGH  160 (330)
T ss_pred             ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCc
Confidence            578999999998888764 789999999742    2233333 33456778999999988654 456999999997632 


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCC--CccceeeeccC------CCce
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASP--TPRIKAELTSS------APAC  349 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~--~~~~~~~~~~~------~~~i  349 (504)
                      +...         ...... .........+.|+|+|++++++.. ++.|.+|+++..  +......+...      ....
T Consensus       161 l~~~---------~~~~~~-~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  230 (330)
T PRK11028        161 LVAQ---------EPAEVT-TVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWA  230 (330)
T ss_pred             cccc---------CCCcee-cCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccc
Confidence            1100         000001 112344678999999999988876 899999999742  22222222211      1123


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLA  425 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~  425 (504)
                      ..+.++|+++. ++++...++.|.+|++........+..  ..........+.++|||++|+++.. +++|.+|+++
T Consensus       231 ~~i~~~pdg~~-lyv~~~~~~~I~v~~i~~~~~~~~~~~--~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        231 ADIHITPDGRH-LYACDRTASLISVFSVSEDGSVLSFEG--HQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             eeEEECCCCCE-EEEecCCCCeEEEEEEeCCCCeEEEeE--EEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            35889999985 444445688999999975432211111  1111234558899999999998875 8899999875

>KOG0322|consensus

Probab=99.88  E-value=1.7e-21  Score=156.96  Aligned_cols=290  Identities=16%  Similarity=0.158  Sum_probs=202.0

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....+.+|...++++.|..+++ |++|..-|.|++|++.+...+..++ .|...|+.+...|+ ..+.+-+.|+.+.+|+
T Consensus         6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT   83 (323)
T ss_pred             CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence            3556678999999999987774 8999999999999999998888888 57788999999887 4789999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-----CCC----EEEEEeCCC-cEEEEeCCCCCcccee--e
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-----DGR----TLIVGGEAS-NLSIWDLASPTPRIKA--E  341 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~----~l~~~~~dg-~i~v~d~~~~~~~~~~--~  341 (504)
                      +..+.....+                  .-.++++.|++     +++    .++.-++.. .+++-|..........  .
T Consensus        84 ia~s~~i~i~------------------Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~  145 (323)
T KOG0322|consen   84 IAYSAFISIH------------------SIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDS  145 (323)
T ss_pred             ccCcceEEEe------------------eeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCch
Confidence            9876532211                  11122333322     111    111111100 0122222111111110  1


Q ss_pred             eccCCCceeeEEE-CCCCCCceeeeccCCCeEEEEecCCCCCCCccc-----ccccccCCCceEEEEEcCCCCEEEEeeC
Q psy17188        342 LTSSAPACYALAI-SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS-----QLDCLQRDNYIRSVKLLPDGRTLIVGGE  415 (504)
Q Consensus       342 ~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~i~~~~~s~~g~~l~~~~~  415 (504)
                      .....+.+.+..+ ..++...++++|.++|.+.+||+..+.....+.     ......|..++.++.+.+.-..=++|+.
T Consensus       146 ~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga  225 (323)
T KOG0322|consen  146 ERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGA  225 (323)
T ss_pred             hccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCc
Confidence            1122334555553 344566688899999999999998863322221     2233457889999999986666678888


Q ss_pred             CCcEEEeeCCCCC--cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188        416 ASNLSIWDLASPT--PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  493 (504)
Q Consensus       416 dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~  493 (504)
                      +..+..|+++...  .....+..-....|..+.+-||++.+|+++.|++||||+.++...+..++-|.+.|++++|+||.
T Consensus       226 ~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~  305 (323)
T KOG0322|consen  226 DDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDC  305 (323)
T ss_pred             cccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCC
Confidence            8889999886542  22222222233447778999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEecCCCC
Q psy17188        494 TKLWTGGLDNT  504 (504)
Q Consensus       494 ~~l~s~s~Dgt  504 (504)
                      ..+|.||.|++
T Consensus       306 ~lmAaaskD~r  316 (323)
T KOG0322|consen  306 ELMAAASKDAR  316 (323)
T ss_pred             chhhhccCCce
Confidence            99999999974

>KOG0303|consensus

Probab=99.88  E-value=3.1e-20  Score=158.09  Aligned_cols=207  Identities=17%  Similarity=0.295  Sum_probs=163.9

Q ss_pred             CCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCc-----cceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEE
Q psy17188        157 QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAV  229 (504)
Q Consensus       157 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i  229 (504)
                      +|.++|..++|+| +...||+|++|.+|.||++..+..     .....+.+|...|.-++|+|. .+.|++++.|.+|.+
T Consensus        79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i  158 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI  158 (472)
T ss_pred             CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence            8999999999999 778899999999999999875432     246678999999999999995 458999999999999


Q ss_pred             EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc-CCceEEE
Q psy17188        230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSV  308 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~  308 (504)
                      ||+.+++.+.++. |...|.++.|+.||.+|++.+.|..||+||.+++++..             ..  ..| ......+
T Consensus       159 Wnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~-------------e~--~~heG~k~~Ra  222 (472)
T KOG0303|consen  159 WNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVS-------------EG--VAHEGAKPARA  222 (472)
T ss_pred             EeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEee-------------ec--ccccCCCccee
Confidence            9999999999988 99999999999999999999999999999999998632             11  122 2234456


Q ss_pred             EEcCCCCEEEEEe---CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        309 KLLPDGRTLIVGG---EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       309 ~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      -|-.+|..+-+|.   .+.++-+||....+.......-.....|.---+.+|.+. ++++|-.|+.|+.|.+...
T Consensus       223 ifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~i-vYl~GKGD~~IRYyEit~d  296 (472)
T KOG0303|consen  223 IFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSI-VYLCGKGDSSIRYFEITNE  296 (472)
T ss_pred             EEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCE-EEEEecCCcceEEEEecCC
Confidence            6777888555552   467899999877654443333344445555556666654 7788888999999998764

>KOG1188|consensus

Probab=99.88  E-value=9.1e-21  Score=158.41  Aligned_cols=271  Identities=17%  Similarity=0.286  Sum_probs=200.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV  293 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~  293 (504)
                      ..++++..+|.|++||..+++.+..++++...+..+.|..  ....+.+++.||+|++||++...-.             
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~-------------  107 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES-------------  107 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh-------------
Confidence            4688888999999999999999999999999999999977  4668999999999999999976421             


Q ss_pred             ccceeccc-CCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC
Q psy17188        294 SQLDCLQR-DNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       294 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                      ..+...++ ..+..+++..-.++.+++|..    +-.+.+||++..+.....-...|...|+++.|+|.... ++++|+.
T Consensus       108 a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pn-lLlSGSv  186 (376)
T KOG1188|consen  108 ARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPN-LLLSGSV  186 (376)
T ss_pred             hheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCC-eEEeecc
Confidence            02222222 245667777767888888753    56799999999877666777889999999999999887 8999999


Q ss_pred             CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCC-------
Q psy17188        369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-------  440 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------  440 (504)
                      ||-+.+||+........+  .....+...|.++.|..++ +.|.+-+..++..+|+++.+..........-..       
T Consensus       187 DGLvnlfD~~~d~EeDaL--~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~  264 (376)
T KOG1188|consen  187 DGLVNLFDTKKDNEEDAL--LHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKED  264 (376)
T ss_pred             cceEEeeecCCCcchhhH--HHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhh
Confidence            999999999876433332  3334577789999999877 458888899999999999876443322221100       


Q ss_pred             ---ceeEEEECC-CCCEEEEeeC-CCcEEEEEcC---C---cceEEEEee-cCCceEEEEEccCCCEEEEecCCC
Q psy17188        441 ---ACYALAISP-DSKVCFSCCS-DGNIAVWDLH---N---QTLVRQFQG-HTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       441 ---~v~~l~~s~-~~~~l~s~~~-dg~i~iwd~~---~---~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                         .+.. +.+| +...++.++. -+...++-+.   +   .+.+..+++ |...|.++.|...+..++|||+||
T Consensus       265 ~~dY~I~-~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG  338 (376)
T KOG1188|consen  265 NCDYVIN-EHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDG  338 (376)
T ss_pred             hhhheee-cccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCc
Confidence               0111 1223 4455555544 4555555433   2   344556666 667789999999999999999998

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.87  E-value=3.9e-19  Score=163.38  Aligned_cols=270  Identities=17%  Similarity=0.266  Sum_probs=176.8

Q ss_pred             EEEEeCCCcEEEEECCC-Ce--EEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECC-CCceEEEeecCCCCCCC
Q psy17188        218 CFSCCSDGNIAVWDLHN-QT--LVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLR-EGCVKVWDISQPGSKTP  292 (504)
Q Consensus       218 l~~~~~dg~i~iwd~~~-~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~-~~~~~~~~~~~~~~~~~  292 (504)
                      +++...++.|.+||+.+ ++  .+..+. +.+....++++|++++|++++ .++.|.+|+++ ++++...          
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~----------   73 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFA----------   73 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEe----------
Confidence            34446789999999964 33  455554 446678899999999887664 57889999986 3443211          


Q ss_pred             cccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCcc-ceeeeccCCCceeeEEECCCCCCceeeeccCCC
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPR-IKAELTSSAPACYALAISPDSKSPFFSSHHYKS  370 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  370 (504)
                          ...........++++|+++++++++. ++.|.+|++++.... ..............++++|+++. ++++...++
T Consensus        74 ----~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~-l~v~~~~~~  148 (330)
T PRK11028         74 ----AESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRT-LWVPCLKED  148 (330)
T ss_pred             ----eeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCE-EEEeeCCCC
Confidence                11112234678999999999888764 788999998643211 11111122235677889999985 556777889


Q ss_pred             eEEEEecCCCCCCCccc-ccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCC--CCcceeecccC------CCC
Q psy17188        371 CVKVWDISQPGSKTPVS-QLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLAS--PTPRIKAELTS------SAP  440 (504)
Q Consensus       371 ~i~i~d~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~--~~~~~~~~~~~------~~~  440 (504)
                      .|.+||+.......... .............++|+|+|+++++++. ++.|.+|+++.  ++.........      +..
T Consensus       149 ~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~  228 (330)
T PRK11028        149 RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTR  228 (330)
T ss_pred             EEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCc
Confidence            99999997643221110 0001112344668999999999988876 89999999974  22222222111      111


Q ss_pred             ceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEeecC---CceEEEEEccCCCEEEEecC-CC
Q psy17188        441 ACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHT---DGASCIDISADGTKLWTGGL-DN  503 (504)
Q Consensus       441 ~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~---~~v~~~~~s~d~~~l~s~s~-Dg  503 (504)
                      ....+.++|++++|+++.. ++.|.+|+++......++.++.   .....+.|+|||++|+++.. ++
T Consensus       229 ~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~  296 (330)
T PRK11028        229 WAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSH  296 (330)
T ss_pred             cceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCC
Confidence            2335789999999998865 6899999996543222222221   24568999999999998875 44

>KOG4227|consensus

Probab=99.87  E-value=1.7e-20  Score=159.50  Aligned_cols=305  Identities=11%  Similarity=0.143  Sum_probs=217.0

Q ss_pred             eeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC---CceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        108 NTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK---TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       108 ~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ..++|.+.|.++.||.++++|++|+ |..+++|+++..-..   +++. +....|...|.|++|....++|.+|..+++|
T Consensus        51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~-~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIG-VMEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCce-eccCccccceEEEEEccCCeeEecCCCccee
Confidence            3458999999999999999999999 899999998653211   2322 3334577899999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-E--EEeecCCCCCeEEEEEccC-CCE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-L--VRQFQGHTDGASCIDISAD-GTK  259 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~--~~~~~~h~~~v~~~~~~~~-~~~  259 (504)
                      .+-|+++.+...........+.|+.+..+|..+.|++.+.++.|.+||.+... .  ...+.........+.|+|. ..+
T Consensus       130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~L  209 (609)
T KOG4227|consen  130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPAL  209 (609)
T ss_pred             EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCcee
Confidence            99999987644333333444589999999998899999999999999998654 1  1122224556788899994 567


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      |++.+..+-+-+||.+..+-.++....        .+........-.++.|+|+|+.+++--....-.+||+-+... ..
T Consensus       210 i~~~~~~~G~~~~D~R~~~~~~~~~~~--------~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~-~V  280 (609)
T KOG4227|consen  210 ILVNSETGGPNVFDRRMQARPVYQRSM--------FKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRC-FV  280 (609)
T ss_pred             EEeccccCCCCceeeccccchHHhhhc--------cccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccc-ee
Confidence            888888899999999876532221110        011111122346788999999988876655666777765332 22


Q ss_pred             eeec-cC-----CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc------------------cccccccCC
Q psy17188        340 AELT-SS-----APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV------------------SQLDCLQRD  395 (504)
Q Consensus       340 ~~~~-~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~------------------~~~~~~~~~  395 (504)
                      .+.. ..     ...+.+++|..|..   +++|+.+-.|.+|.+.......-+                  ......+|.
T Consensus       281 ~k~D~N~~GY~N~~T~KS~~F~~D~~---v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHR  357 (609)
T KOG4227|consen  281 LKSDHNPNGYCNIKTIKSMTFIDDYT---VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHR  357 (609)
T ss_pred             EeccCCCCcceeeeeeeeeeeeccee---eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccc
Confidence            2222 11     12455667776654   899999999999998643211111                  111234577


Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      .-++.+.|+|...+|++.+-.+.++||.--
T Consensus       358 Sv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  358 SVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             ccccceeecCCcceEeccchhhheeccccc
Confidence            788999999999999999999999999743

>KOG0642|consensus

Probab=99.87  E-value=6.1e-21  Score=169.79  Aligned_cols=279  Identities=18%  Similarity=0.282  Sum_probs=198.8

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC--------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN--------QTLVRQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ....+..|...|+.++|.+....|++++.||.|.+|+++.        -+.+.+|++|.++|.|+++.+++..+++|+.|
T Consensus       286 ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  286 IKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             eeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence            3456778999999999999999999999999999999932        26788999999999999999999999999999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |+|+.|++.... --++..    ....-.-...+|.+.++.+++++....|++++.||+++.|+.....+ .........
T Consensus       366 g~I~~w~~p~n~-dp~ds~----dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~  439 (577)
T KOG0642|consen  366 GTIRCWNLPPNQ-DPDDSY----DPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEH  439 (577)
T ss_pred             ceeeeeccCCCC-Cccccc----CcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCcccc
Confidence            999999776321 111100    01111334567899999999999999999999999999999877654 222222222


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc--ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS--QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      ....++.+...... ..++...-+.-.++++........+.  ..........+..+.+.|.+.+.+++..|+.|+++|.
T Consensus       440 g~Plsvd~~ss~~a-~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn  518 (577)
T KOG0642|consen  440 GYPLSVDRTSSRPA-HSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDN  518 (577)
T ss_pred             CCcceEeeccchhH-hhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccc
Confidence            23344444332211 11222222222233322221111111  0111112345778999999999999999999999999


Q ss_pred             CCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC
Q psy17188        425 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  482 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  482 (504)
                      .+++.+  .....|...++++++.|+|-+|++++.|+.+++|.+....++.....|..
T Consensus       519 ~~~~~l--~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r~  574 (577)
T KOG0642|consen  519 KTGKIL--HSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHRK  574 (577)
T ss_pred             cccccc--hheeeccceecceeecCCCceEEeecCCceeehhhccchheeeccccccc
Confidence            987654  45567788899999999999999999999999999988888777666643

>KOG4497|consensus

Probab=99.87  E-value=1.2e-20  Score=156.87  Aligned_cols=299  Identities=16%  Similarity=0.155  Sum_probs=205.1

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeec
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      -.+|||+|+++|+.+. ..+.|-|..+-+.....   .--..|.-+.|..|.-+++ ....|+.|.+|++...+-...+.
T Consensus        13 ~c~fSp~g~yiAs~~~-yrlviRd~~tlq~~qlf---~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckId   88 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSR-YRLVIRDSETLQLHQLF---LCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKID   88 (447)
T ss_pred             ceeECCCCCeeeeeee-eEEEEeccchhhHHHHH---HHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEec
Confidence            4689999999999975 48888888765532221   2234577889998876544 55678899999999999989998


Q ss_pred             CCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        243 GHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      ....++..++|+|||+ .|.+...|-.|.+|.+.+.+...                .......+..++|+|+|++.+..+
T Consensus        89 eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~----------------~~~pK~~~kg~~f~~dg~f~ai~s  152 (447)
T KOG4497|consen   89 EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL----------------LPHPKTNVKGYAFHPDGQFCAILS  152 (447)
T ss_pred             cCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE----------------ecccccCceeEEECCCCceeeeee
Confidence            8889999999999996 55667788999999999876432                122234468899999999998887


Q ss_pred             CCCcEEEEeCC-CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE
Q psy17188        322 EASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS  400 (504)
Q Consensus       322 ~dg~i~v~d~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~  400 (504)
                      +-.....+.+. .........+....-..+.+.|+|||..+.+.-.--+-.|..|.                 ..-.+..
T Consensus       153 RrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-----------------~~lG~k~  215 (447)
T KOG4497|consen  153 RRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-----------------RGLGLKF  215 (447)
T ss_pred             cccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-----------------eccceeE
Confidence            64322222222 11223334444455578899999998842222222222233332                 2334679


Q ss_pred             EEEcCCCCEEEEeeCCCcEEEeeCCCCCcc--------------------------------------------------
Q psy17188        401 VKLLPDGRTLIVGGEASNLSIWDLASPTPR--------------------------------------------------  430 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~--------------------------------------------------  430 (504)
                      ++|+|.+++|++|+.|+.+++.+--+.+..                                                  
T Consensus       216 v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~  295 (447)
T KOG4497|consen  216 VEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETI  295 (447)
T ss_pred             EEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhh
Confidence            999999999999999999887653211000                                                  


Q ss_pred             --------e------eecccCCCCceeEEEECCCCCEEEEeeCC--CcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        431 --------I------KAELTSSAPACYALAISPDSKVCFSCCSD--GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       431 --------~------~~~~~~~~~~v~~l~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                              .      ..........+.-++|++|..++++-.+.  ..+.+||+++.++...+. ...+|....|.|...
T Consensus       296 YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~p  374 (447)
T KOG4497|consen  296 YEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRP  374 (447)
T ss_pred             hhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCc
Confidence                    0      00011122345668999999999987543  579999999888766554 467899999999877


Q ss_pred             EEEEec
Q psy17188        495 KLWTGG  500 (504)
Q Consensus       495 ~l~s~s  500 (504)
                      .|+.+.
T Consensus       375 rL~vct  380 (447)
T KOG4497|consen  375 RLVVCT  380 (447)
T ss_pred             eEEEEc
Confidence            776543

>KOG1523|consensus

Probab=99.87  E-value=1.4e-19  Score=150.06  Aligned_cols=243  Identities=16%  Similarity=0.186  Sum_probs=182.4

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC-CC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL-AS  190 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~-~~  190 (504)
                      -++|+|.+|++|...+|.+. ...|.||.......-.....+.  .|...|+.++|+|..+.|++++.|..-++|.. ..
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls--~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~   87 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLS--EHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG   87 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehh--hhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence            37899999999999999988 7799999987765455555444  79999999999999999999999999999998 66


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE----EeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV----RQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ++.+....+..+....+++.|+|.++.+++|+....|.||-++...--    +.-+.+.+.|.+++|+|++-+|++|+.|
T Consensus        88 ~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D  167 (361)
T KOG1523|consen   88 GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTD  167 (361)
T ss_pred             CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccC
Confidence            777778888889999999999999999999999999999987654322    1223467889999999999999999999


Q ss_pred             CeEEEEECCCCceEEEeecC-CCCCCCcccce--ecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        267 NTVRSWDLREGCVKVWDISQ-PGSKTPVSQLD--CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +..+++..--..+..-.... =+++.++..+.  .....+.+..+.|+|+|+.|+-.+.|..+.+-|...+.........
T Consensus       168 ~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~  247 (361)
T KOG1523|consen  168 GKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVAT  247 (361)
T ss_pred             cceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhh
Confidence            99999974322211000000 01222222221  1145678999999999999999999999999998776432222222


Q ss_pred             cCCCceeeEEECCCC
Q psy17188        344 SSAPACYALAISPDS  358 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~  358 (504)
                      .+ -+..++.|-.+.
T Consensus       248 ~~-lP~ls~~~ise~  261 (361)
T KOG1523|consen  248 AQ-LPLLSVSWISEN  261 (361)
T ss_pred             cc-CCceeeEeecCC
Confidence            22 355555554443

>KOG1007|consensus

Probab=99.86  E-value=3.2e-19  Score=145.78  Aligned_cols=297  Identities=19%  Similarity=0.256  Sum_probs=201.4

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCC-------CcEEEEeCCCCCcc-------cee
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA-------SNLSIWDLASPTPR-------IKA  197 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d-------g~i~iw~~~~~~~~-------~~~  197 (504)
                      |+.|.+.+++.+...  +..-.+..|.+.|..++-+| +.+.|+++..+       -.+.||.+......       ...
T Consensus        39 dNqVhll~~d~e~s~--l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~  116 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSE--LLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVA  116 (370)
T ss_pred             cceeEEEEecCccch--hhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhh
Confidence            788999888775432  23333446889999999999 55566665331       23789998754322       122


Q ss_pred             eee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeec-----CCCCCeEEEEEcc--CCCEEEEEcCCCe
Q psy17188        198 ELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQ-----GHTDGASCIDISA--DGTKLWTGGLDNT  268 (504)
Q Consensus       198 ~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~-----~h~~~v~~~~~~~--~~~~l~s~~~dg~  268 (504)
                      .+. .+-+.|.|+.|.|++..+++-. |..|.+|+++++.. +..+.     .+....++-+|+|  +++.+++.+ |++
T Consensus       117 ~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~t  194 (370)
T KOG1007|consen  117 SLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DST  194 (370)
T ss_pred             cCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCc
Confidence            222 4456799999999999998875 78999999998765 33332     2556678889998  787877765 899


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCC
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAP  347 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~  347 (504)
                      +..||+++....              ......|...+..+.|+|+.+ +|++++.||.|++||.+..+ .+..++..|..
T Consensus       195 l~~~D~RT~~~~--------------~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk-~pv~el~~HsH  259 (370)
T KOG1007|consen  195 LQFWDLRTMKKN--------------NSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK-FPVQELPGHSH  259 (370)
T ss_pred             EEEEEccchhhh--------------cchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-ccccccCCCce
Confidence            999999976521              111235677799999999775 57788999999999998754 66778899999


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .+.++.|+|.-.. ++++++.|..|.+|-...-....               .+.|-.|..-.--......++  -+.++
T Consensus       260 WvW~VRfn~~hdq-LiLs~~SDs~V~Lsca~svSSE~---------------qi~~~~dese~e~~dseer~k--pL~dg  321 (370)
T KOG1007|consen  260 WVWAVRFNPEHDQ-LILSGGSDSAVNLSCASSVSSEQ---------------QIEFEDDESESEDEDSEERVK--PLQDG  321 (370)
T ss_pred             EEEEEEecCccce-EEEecCCCceeEEEecccccccc---------------ccccccccccCcchhhHHhcc--ccccc
Confidence            9999999998776 88899999999998765422111               111111100000000000011  01111


Q ss_pred             CcceeecccCCCCceeEEEECCCCC-EEEEeeCCCcEEEEEcC
Q psy17188        428 TPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       428 ~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~  469 (504)
                         .......|...|.+++||.-.. .+|+-+.||++.|=.+.
T Consensus       322 ---~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  322 ---QLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             ---ccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence               1234567888999999998555 45677999999887654

>KOG0771|consensus

Probab=99.86  E-value=1.6e-19  Score=155.51  Aligned_cols=205  Identities=23%  Similarity=0.290  Sum_probs=160.9

Q ss_pred             EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188        249 SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  328 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  328 (504)
                      ..++|+.+|..|++++.||++|+|+......               .+....|...|.++.|+|||++|++.+.| ..+|
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t---------------~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~V  211 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLT---------------ILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARV  211 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchh---------------hhhhHhhcCccccceeCCCCcEEEEecCC-ceEE
Confidence            7899999999999999999999999665442               55667788999999999999999999999 8999


Q ss_pred             EeCCCCCccceeeeccCCCceeeEEECCCC---CCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188        329 WDLASPTPRIKAELTSSAPACYALAISPDS---KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  405 (504)
Q Consensus       329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  405 (504)
                      |+.+++.................+.|+.|+   ...+++.....+.|+.||+........+...+.......|++++.++
T Consensus       212 W~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~  291 (398)
T KOG0771|consen  212 WSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSD  291 (398)
T ss_pred             EEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcC
Confidence            999998555444444555566777777766   22244455556778888776544433333334444566899999999


Q ss_pred             CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        406 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       406 ~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ||++++.|+.||.|.|++..+-+.. ......|...|+.+.|+||.+++++.+.|....|..+.-
T Consensus       292 dGkf~AlGT~dGsVai~~~~~lq~~-~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  292 DGKFLALGTMDGSVAIYDAKSLQRL-QYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             CCcEEEEeccCCcEEEEEeceeeee-EeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            9999999999999999999865533 344567888999999999999999999999888887654

>KOG0322|consensus

Probab=99.86  E-value=4.5e-20  Score=148.80  Aligned_cols=297  Identities=15%  Similarity=0.216  Sum_probs=196.5

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      .+|.+.++++.|..+++ |.+|...|.|++|++.+.....  .+. .+...|+.+.--|+ ..|.+-+.|..+.+|++.-
T Consensus        11 Rp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~--~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~   86 (323)
T KOG0322|consen   11 RPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLP--LIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAY   86 (323)
T ss_pred             ccccchheehhhccchh-hhcccccceEEEEEeecCccch--hhhhhccceeeceeecCC-cchhhcCCCceEEEEEccC
Confidence            38999999999998776 8999999999999999766533  333 45677888888887 4678888999999999987


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC-eEEEEECCCCceEEEeecCCCCCCC--cccceecccCCceEEEEEc
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDN-TVRSWDLREGCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~  311 (504)
                      +..+..   |.-.++++.|.+-.  +...+... .+..++-+....  ......+....  +..-......+.+.+..+.
T Consensus        87 s~~i~i---~Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde--~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~  159 (323)
T KOG0322|consen   87 SAFISI---HSIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDE--THKQDGGDTTQVQIADDSERSKLGSVMCQDKD  159 (323)
T ss_pred             cceEEE---eeeeccccccccce--eccCCCcchhheecCCcccch--hhhhccCccceeEccCchhccccCceeeeecc
Confidence            654433   33344455554321  11111111 111111111000  00000000000  0011112234456666543


Q ss_pred             C-CCC--EEEEEeCCCcEEEEeCCCCCc--------cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        312 P-DGR--TLIVGGEASNLSIWDLASPTP--------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       312 ~-~~~--~l~~~~~dg~i~v~d~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      . ++.  ++++|.++|.+.+||+.++..        +.......|..++.++.+.+...  .=++++.+..+..|.+...
T Consensus       160 ~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~--rGisgga~dkl~~~Sl~~s  237 (323)
T KOG0322|consen  160 HACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCD--RGISGGADDKLVMYSLNHS  237 (323)
T ss_pred             ccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhc--CCcCCCccccceeeeeccc
Confidence            3 232  467788999999999988632        22334456788999999887655  3567777888889988754


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                      ............ .+..+..+.+-||++.+|+++.|+.|++|+.++..++.+.  ..|...|++++|+|+...+|+++.|
T Consensus       238 ~gslq~~~e~~l-knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL--kyHsagvn~vAfspd~~lmAaaskD  314 (323)
T KOG0322|consen  238 TGSLQIRKEITL-KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL--KYHSAGVNAVAFSPDCELMAAASKD  314 (323)
T ss_pred             cCcccccceEEe-cCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhh--hhhhcceeEEEeCCCCchhhhccCC
Confidence            322222222222 2345778999999999999999999999999988766554  5566889999999999999999999


Q ss_pred             CcEEEEEc
Q psy17188        461 GNIAVWDL  468 (504)
Q Consensus       461 g~i~iwd~  468 (504)
                      ++|.+|++
T Consensus       315 ~rISLWkL  322 (323)
T KOG0322|consen  315 ARISLWKL  322 (323)
T ss_pred             ceEEeeec
Confidence            99999986

>KOG0649|consensus

Probab=99.86  E-value=1.6e-18  Score=138.27  Aligned_cols=247  Identities=19%  Similarity=0.268  Sum_probs=177.3

Q ss_pred             cEEEEEEcCCCcEEEEec-CCeEEEEeCCCC-----CCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        115 VVCAVTISNPTKYVYTGG-KGCVKVWDISQP-----GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      .|.+-+++|.+++|+++. +|.|.+..+.+.     +.......+....|+++|+.++|.  .++|++++ ||.|+-|..
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence            456678999999999999 999999998642     122233344446899999999998  55677776 599999987


Q ss_pred             CCCCc------cceeeee-----cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        189 ASPTP------RIKAELT-----SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       189 ~~~~~------~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      .....      ......+     ..-..|+++...|..+-++.++.|+.++-||+++|+..+++++|+..|.++.--...
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~  168 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN  168 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence            64322      0111111     223468999999877777777799999999999999999999999999999885556


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ..+++|++||++|+||.++++....- .....+    ..........|-+++.+  ..+|++|+ ...+.+|.++..+..
T Consensus       169 ~qilsG~EDGtvRvWd~kt~k~v~~i-e~yk~~----~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhLrsse~t  240 (325)
T KOG0649|consen  169 GQILSGAEDGTVRVWDTKTQKHVSMI-EPYKNP----NLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHLRSSEST  240 (325)
T ss_pred             cceeecCCCccEEEEeccccceeEEe-ccccCh----hhcCcccCceeEEEecc--CceEEecC-CCceeEEeccCCCce
Confidence            68999999999999999998743211 000000    11111223445666554  55788774 457999999998777


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ....++.   ++..+.|..+    .+++++..+.+.-|.+..
T Consensus       241 ~vfpipa---~v~~v~F~~d----~vl~~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  241 CVFPIPA---RVHLVDFVDD----CVLIGGEGNHVQSYTLNG  275 (325)
T ss_pred             EEEeccc---ceeEeeeecc----eEEEeccccceeeeeecc
Confidence            6666665   5666677666    678888888888887753

>KOG1007|consensus

Probab=99.85  E-value=2.1e-19  Score=146.82  Aligned_cols=250  Identities=22%  Similarity=0.331  Sum_probs=186.1

Q ss_pred             cCCCcEEEEEEcC-CCcEEEEecC--------CeEEEEeCCCCCCCCceeeeeec-----CCCCceEEEEEccCCCEEEE
Q psy17188        111 SHGEVVCAVTISN-PTKYVYTGGK--------GCVKVWDISQPGSKTPVSQLDCL-----QRDNYIRSVKLLPDGRTLIV  176 (504)
Q Consensus       111 ~h~~~V~~v~~s~-~~~~l~~~~d--------~~i~vw~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~  176 (504)
                      .|-+.|..++-+| +.++|++.-.        ..+.||.+...........+.+.     .+-+.|.|+.|.|++..|++
T Consensus        61 h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klas  140 (370)
T KOG1007|consen   61 HHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLAS  140 (370)
T ss_pred             cCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEE
Confidence            5778999999998 5566666531        35889998764333222222111     24468999999999999998


Q ss_pred             ecCCCcEEEEeCCCCCccceeee-----ecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCe
Q psy17188        177 GGEASNLSIWDLASPTPRIKAEL-----TSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGA  248 (504)
Q Consensus       177 ~~~dg~i~iw~~~~~~~~~~~~~-----~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v  248 (504)
                      -. |..|.+|+++..... ...+     ..+....++-+|+|  +++.+++. .|+++..||+++.++...+. .|...|
T Consensus       141 m~-dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~v  217 (370)
T KOG1007|consen  141 MD-DNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRV  217 (370)
T ss_pred             ec-cCceEEEEcccCcch-heeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhccee
Confidence            75 889999999876542 2222     12455678889999  77777766 67899999999987776664 588889


Q ss_pred             EEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcE
Q psy17188        249 SCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNL  326 (504)
Q Consensus       249 ~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i  326 (504)
                      ..+.|+|+.. +|++++.||.|++||.+.-+..              ......|...+.++.|+|. .+++++++.|..+
T Consensus       218 rdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p--------------v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V  283 (370)
T KOG1007|consen  218 RDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP--------------VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAV  283 (370)
T ss_pred             eeccCCCCceEEEEEcCCCccEEEEeccCCCcc--------------ccccCCCceEEEEEEecCccceEEEecCCCcee
Confidence            9999999754 7899999999999999876532              4455678899999999994 5678889999999


Q ss_pred             EEEeCCCCC---------------------------ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        327 SIWDLASPT---------------------------PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       327 ~v~d~~~~~---------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      .+|....-.                           ......+..|...|.+++|+.-..+ +|++-+.||.+.|=.+.
T Consensus       284 ~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPW-iFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  284 NLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPW-IFASLSYDGRVIISSVP  361 (370)
T ss_pred             EEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCe-eEEEeccCceEEeecCC
Confidence            998653211                           0122345678889999999988887 88999999998876654

>KOG1587|consensus

Probab=99.85  E-value=1e-18  Score=163.64  Aligned_cols=279  Identities=20%  Similarity=0.285  Sum_probs=195.6

Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeE--EEe----ecCCCCCeEEEEE
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL--VRQ----FQGHTDGASCIDI  253 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~--~~~----~~~h~~~v~~~~~  253 (504)
                      +.+.+|+++.. ......+. ....|.++.|+| +..+++.|+.+|.|.+||++.+..  ...    ...|..+++.+.|
T Consensus       222 ~~~~vW~~~~p-~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  222 GVLLVWSLKNP-NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             ceEEEEecCCC-CCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            47999999876 22333333 356699999999 556888889999999999987754  222    2348899999999


Q ss_pred             ccCC--CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEe
Q psy17188        254 SADG--TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWD  330 (504)
Q Consensus       254 ~~~~--~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d  330 (504)
                      ..+.  .-+++++.||.|..|+++.-....-.....   ..............+++++|.+ +-..+++|+++|.|..-.
T Consensus       300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~---~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~  376 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLE---SKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGC  376 (555)
T ss_pred             eccCCCCceEEEecCCcEeeeeccccccchhhcccc---cccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEe
Confidence            7743  459999999999999877543211000000   0000111123345578999988 557799999999988744


Q ss_pred             CCCCCccc------eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        331 LASPTPRI------KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       331 ~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      ....+...      ......|.+.+..+.++|-+...++.++  |.+++||.....    ....+....+...+++++||
T Consensus       377 r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g--DW~vriWs~~~~----~~Pl~~~~~~~~~v~~vaWS  450 (555)
T KOG1587|consen  377 RKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG--DWTVRIWSEDVI----ASPLLSLDSSPDYVTDVAWS  450 (555)
T ss_pred             ccCCcccccccccccccccccCcceEeeecCCCccceeeeec--cceeEeccccCC----CCcchhhhhccceeeeeEEc
Confidence            33332222      3455668889999999999886444443  999999987631    11222223455669999999


Q ss_pred             CCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        405 PDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       405 ~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      |-. ..++++..||.|.+||+............-.....+.+.|+++|+.|+.|+..|++++|++..
T Consensus       451 ptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  451 PTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             CcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            965 467778889999999998665555555444466677889999999999999999999999854

>KOG0303|consensus

Probab=99.84  E-value=2.1e-19  Score=153.12  Aligned_cols=208  Identities=19%  Similarity=0.334  Sum_probs=163.8

Q ss_pred             cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCcee--eeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEE
Q psy17188        111 SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVS--QLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSI  185 (504)
Q Consensus       111 ~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i  185 (504)
                      ||+++|..++|+| +...||+|+ |.+|.||++-.+.....+.  ...+.+|...|.-++|+| -.+.|++++.|.+|.+
T Consensus        79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i  158 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI  158 (472)
T ss_pred             CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence            9999999999999 567788888 9999999997665443332  345558999999999999 4568899999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC-eEEEEEccCCCEEEEEc
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTKLWTGG  264 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~  264 (504)
                      ||+.+++..  ..+. |...|+++.|+.||.+|++.+.|..|+|||.++++.+..-.+|.+. -....|..++. +++.+
T Consensus       159 Wnv~tgeal--i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tTG  234 (472)
T KOG0303|consen  159 WNVGTGEAL--ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTTG  234 (472)
T ss_pred             EeccCCcee--eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eeeec
Confidence            999988753  3344 9999999999999999999999999999999999999988888763 44566778887 54443


Q ss_pred             ----CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEeCCCCC
Q psy17188        265 ----LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPT  335 (504)
Q Consensus       265 ----~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d~~~~~  335 (504)
                          .+.++-+||...-+.            ++ .+......+.|.---|.++.+.++. |-.|+.|+.|.+....
T Consensus       235 fsr~seRq~aLwdp~nl~e------------P~-~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  235 FSRMSERQIALWDPNNLEE------------PI-ALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             cccccccceeccCcccccC------------cc-eeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence                467899999876431            11 2333444556666678888887765 5568999999988754

>KOG0642|consensus

Probab=99.84  E-value=7.8e-20  Score=162.83  Aligned_cols=254  Identities=19%  Similarity=0.320  Sum_probs=186.3

Q ss_pred             eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC------CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188        154 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  227 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  227 (504)
                      ....|...|+.++|.|....|++++.|+.|.+|+++.      ........+.+|.++|.|++..+++..+++|+.||+|
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I  368 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI  368 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence            4557889999999999999999999999999999932      2244577889999999999999999999999999999


Q ss_pred             EEEECCCC----------eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        228 AVWDLHNQ----------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       228 ~iwd~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      +.|++...          .....+.||.+.|+.+++++....|++++.||+++.|+.......              .+.
T Consensus       369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~--------------~f~  434 (577)
T KOG0642|consen  369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPC--------------TFG  434 (577)
T ss_pred             eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCcc--------------ccC
Confidence            99966421          344567899999999999998889999999999999998876531              122


Q ss_pred             ecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeec-----cCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        298 CLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELT-----SSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                      .........++.+-... ...++...-+.-.+++.............     .....+..+.+.|...  +.+++..++.
T Consensus       435 ~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~--~~~~~hed~~  512 (577)
T KOG0642|consen  435 EPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTAD--ITFTAHEDRS  512 (577)
T ss_pred             CccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCC--eeEecccCCc
Confidence            22233334455554322 22222222233333333332222221111     1123566777888876  8899999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                      |+++|...+....     ....|...++++++.|+|-+|++++.|+.+++|.+....
T Consensus       513 Ir~~dn~~~~~l~-----s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~  564 (577)
T KOG0642|consen  513 IRFFDNKTGKILH-----SMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT  564 (577)
T ss_pred             eecccccccccch-----heeeccceecceeecCCCceEEeecCCceeehhhccchh
Confidence            9999988764332     223577889999999999999999999999999987543

>KOG1524|consensus

Probab=99.83  E-value=5.5e-19  Score=156.42  Aligned_cols=264  Identities=17%  Similarity=0.238  Sum_probs=192.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-------CCCEEEEecCCCcE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i  183 (504)
                      .|.+.|+|+.|+.....+.+++|..+.+|.--+..........    .+.--+.+-.-+       ....++.++.||.+
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p----~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf   87 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLP----DDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRF   87 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCC----cccCCccccccccccCCCCCcceEEEEcCCceE
Confidence            6888899999999999999998877777754332222211111    011011111111       23568888899999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      .|.+-.   .+.......|.+.+.+-.|+|||.-|+++++||.|++|. ++|-+..++.....+|.|++|.|+.+.++.+
T Consensus        88 ~il~k~---~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c  163 (737)
T KOG1524|consen   88 VILNKS---ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFC  163 (737)
T ss_pred             EEeccc---chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEe
Confidence            998753   234566788999999999999999999999999999998 6676666676688899999999987655544


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      -. +.+.+=.+....               ..+....|++-|.++.|++..+.+++|++|-..++||...   .......
T Consensus       164 ~g-~h~~IKpL~~n~---------------k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G---~~Lf~S~  224 (737)
T KOG1524|consen  164 QG-GHISIKPLAANS---------------KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG---ANLFTSA  224 (737)
T ss_pred             cC-CeEEEeeccccc---------------ceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC---cccccCC
Confidence            32 344444443322               1566778999999999999999999999999999999754   4556667


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  421 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i  421 (504)
                      .|..+|++++|.|+ +  .++.++.+ +++   ++             ....+.|..++||+||..+++|+..|.+.+
T Consensus       225 ~~ey~ITSva~npd-~--~~~v~S~n-t~R---~~-------------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  225 AEEYAITSVAFNPE-K--DYLLWSYN-TAR---FS-------------SPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             hhccceeeeeeccc-c--ceeeeeee-eee---ec-------------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence            78889999999999 3  45555432 233   11             134577899999999999999999997654

>KOG0644|consensus

Probab=99.83  E-value=4.9e-20  Score=171.19  Aligned_cols=286  Identities=16%  Similarity=0.230  Sum_probs=218.0

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +.+|.+.|.|+.|...|.++++|++|..++||..++..  ......+|.+.|+.++.+.++.++++++.|..|++|.+.+
T Consensus       186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~--~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~  263 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETAR--CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD  263 (1113)
T ss_pred             HHhhhhheeeeeeccccceEeecCccceeeeeeccchh--hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence            44899999999999999999999999999999977554  5778899999999999999999999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      +.++..+.+|++.|++++|+|-.    +.+.||++++||.+-. ..++-.          .-........+.++.|..++
T Consensus       264 ~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~-~~~y~p----------rp~~~~~~~~~~s~~~~~~~  328 (1113)
T KOG0644|consen  264 GAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLE-PRIYVP----------RPLKFTEKDLVDSILFENNG  328 (1113)
T ss_pred             CchHHHHhccccceeeeccCccc----cCCCCCceEecccccc-ccccCC----------CCCCcccccceeeeeccccc
Confidence            99999999999999999999953    7789999999998821 111100          01112233557788888889


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      ..+++++.|+.-..|.+........        .+.-+..+.+... +.++.-.+-.+.+|++..+.....     ...|
T Consensus       329 ~~f~Tgs~d~ea~n~e~~~l~~~~~--------~lif~t~ssd~~~-~~~~ar~~~~~~vwnl~~g~l~H~-----l~gh  394 (1113)
T KOG0644|consen  329 DRFLTGSRDGEARNHEFEQLAWRSN--------LLIFVTRSSDLSS-IVVTARNDHRLCVWNLYTGQLLHN-----LMGH  394 (1113)
T ss_pred             cccccccCCcccccchhhHhhhhcc--------ceEEEeccccccc-cceeeeeeeEeeeeecccchhhhh-----hccc
Confidence            9999999999888887654322111        1111112222221 566677788899999877643322     2356


Q ss_pred             CCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        395 DNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       395 ~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      ..++..+.++|-.. ...+++.||...|||+-.+.++.... .+| ..+...+||+||..++....-|.++|.....++.
T Consensus       395 sd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~-~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s  472 (1113)
T KOG0644|consen  395 SDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF-IGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS  472 (1113)
T ss_pred             ccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee-ccc-ceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence            77888999999554 44578899999999999887776665 334 4466679999999999988889999998755543

>KOG1310|consensus

Probab=99.83  E-value=3e-18  Score=152.24  Aligned_cols=219  Identities=19%  Similarity=0.360  Sum_probs=155.6

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+|.+.|+|+.|+.+|.+|++|++|-.+.|||.-..+. ....-.+|...|.++.|-|  +.+++++|..|..|+++|+.
T Consensus        47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kl-lhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~  125 (758)
T KOG1310|consen   47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKL-LHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD  125 (758)
T ss_pred             ccccceecceeecCCCCEEeecCCcceEEeecchhcce-eeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence            38999999999999999999999999999999885433 3445678999999999999  55689999999999999998


Q ss_pred             C----------CeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        234 N----------QTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       234 ~----------~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      .          .+....+..|...|..++-.|++ +.+.++++||+|+-+|++....-     .+....+.........-
T Consensus       126 ~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c-----~p~~~~~~~l~ny~~~l  200 (758)
T KOG1310|consen  126 SSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVC-----NPDEDCPSILVNYNPQL  200 (758)
T ss_pred             cccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccC-----CccccccHHHHHhchhh
Confidence            4          23445567799999999999987 78999999999999999974310     00000011111111222


Q ss_pred             CceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCcc-----------------ceeeeccCC-----------CceeeEE
Q psy17188        303 NYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPR-----------------IKAELTSSA-----------PACYALA  353 (504)
Q Consensus       303 ~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~-----------------~~~~~~~~~-----------~~i~~~~  353 (504)
                      -...++..+|. ..+|++|+.|-..++||.+...+.                 .....+.|.           ..++-++
T Consensus       201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt  280 (758)
T KOG1310|consen  201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT  280 (758)
T ss_pred             heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence            45678999994 568899999999999995321100                 000011111           1256678


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      |+|+|.. ++++- ....|.++|+...+.
T Consensus       281 fnpNGtE-lLvs~-~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  281 FNPNGTE-LLVSW-GGEHVYLFDVNEDKS  307 (758)
T ss_pred             ECCCCcE-EEEee-CCeEEEEEeecCCCC
Confidence            8999886 33333 345688888876543

>KOG0290|consensus

Probab=99.83  E-value=1.4e-17  Score=136.38  Aligned_cols=284  Identities=14%  Similarity=0.185  Sum_probs=198.0

Q ss_pred             CCceEEEEEcc---CCCEEEEec----CCCcEEEEeCCCCCcccee-eeecCcCceEEEEECCCCC-----EEEEEeCCC
Q psy17188        159 DNYIRSVKLLP---DGRTLIVGG----EASNLSIWDLASPTPRIKA-ELTSSAPACYALAISPDSK-----VCFSCCSDG  225 (504)
Q Consensus       159 ~~~v~~~~~s~---~~~~l~~~~----~dg~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg  225 (504)
                      .-.+.++.|+.   ...+||.|+    ..+.|.|..+......... .-..|.-+++.+.|.|+..     +|++.+  .
T Consensus        44 p~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D  121 (364)
T KOG0290|consen   44 PWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--D  121 (364)
T ss_pred             CCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--C
Confidence            34567778874   345788886    3566777766543322111 1136788899999999763     555543  4


Q ss_pred             cEEEEECCCC--eEE--Eee-----cCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        226 NIAVWDLHNQ--TLV--RQF-----QGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       226 ~i~iwd~~~~--~~~--~~~-----~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      .+++|.+...  +..  ..+     ..+..++++..|+. +.++|.++|-|-+..+||++++.....            .
T Consensus       122 ~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~v------------k  189 (364)
T KOG0290|consen  122 FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTV------------K  189 (364)
T ss_pred             eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccce------------e
Confidence            7999998742  211  111     23667899999988 778999999999999999998732100            4


Q ss_pred             ceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccce-eeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIK-AELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .....|+.+|..++|...+ +.+++.+.||.+++||++..+...+ .+-.....+...++|++.....+...+.....|.
T Consensus       190 TQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~  269 (364)
T KOG0290|consen  190 TQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVV  269 (364)
T ss_pred             eEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEE
Confidence            4567899999999999966 5678889999999999998654333 3333336678889999887763334444556899


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCC-CCEEEEeeCCCcEEEeeCCCCCccee---ecccCCCCceeEEEECC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIK---AELTSSAPACYALAISP  449 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~v~~l~~s~  449 (504)
                      |.|++.+..    .......|...|+.++|.|. ...|+++++|..+.+||+...-....   .........|+.+.|++
T Consensus       270 iLDiR~P~t----pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~  345 (364)
T KOG0290|consen  270 ILDIRVPCT----PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSS  345 (364)
T ss_pred             EEEecCCCc----ceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecc
Confidence            999987533    23344579999999999995 56899999999999999975322000   11112456799999996


Q ss_pred             -CCCEEEEeeCC
Q psy17188        450 -DSKVCFSCCSD  460 (504)
Q Consensus       450 -~~~~l~s~~~d  460 (504)
                       .+.+++.+...
T Consensus       346 ~~~Dwiai~~~k  357 (364)
T KOG0290|consen  346 SQPDWIAICFGK  357 (364)
T ss_pred             cCCCEEEEEecC
Confidence             56677776543

>KOG1587|consensus

Probab=99.83  E-value=3.9e-18  Score=159.79  Aligned_cols=270  Identities=16%  Similarity=0.184  Sum_probs=197.3

Q ss_pred             cccCCCCCccccceeeecCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCC-CceeeeeecCCCCceEEEEEccC
Q psy17188         94 ALIGPGIPRHARQINTLSHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLPD  170 (504)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~  170 (504)
                      .+++|++......-..+.-...|+|+.|+| +..+++.|. +|.|.+||+..+... ..........|..++..+.|..+
T Consensus       223 ~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~  302 (555)
T KOG1587|consen  223 VLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN  302 (555)
T ss_pred             eEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence            567777766666666667889999999999 456666666 999999999887652 22223344479999999999875


Q ss_pred             CC--EEEEecCCCcEEEEeCCCCCccceee-e---------ecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCC---
Q psy17188        171 GR--TLIVGGEASNLSIWDLASPTPRIKAE-L---------TSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN---  234 (504)
Q Consensus       171 ~~--~l~~~~~dg~i~iw~~~~~~~~~~~~-~---------~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~---  234 (504)
                      ..  -+++++.||.|..|+++.-....... +         ......+++++|.+ +-..+++|+.+|.|.--+-..   
T Consensus       303 ~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~  382 (555)
T KOG1587|consen  303 EHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTP  382 (555)
T ss_pred             CCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcc
Confidence            44  49999999999999886533211110 0         01234578999988 445788999999987733222   


Q ss_pred             C-----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        235 Q-----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       235 ~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      .     +.+..+..|.++|.++.++|=+..++..+.|.++++|.......              +.+....+...+.+++
T Consensus       383 ~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~--------------Pl~~~~~~~~~v~~va  448 (555)
T KOG1587|consen  383 APEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIAS--------------PLLSLDSSPDYVTDVA  448 (555)
T ss_pred             cccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCC--------------cchhhhhccceeeeeE
Confidence            2     12335566899999999999665555444499999998763221              1333445566699999


Q ss_pred             EcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        310 LLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       310 ~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      |||.. ..++++..+|.+.+||+......+.............+.|+++++  +++.|...|.+.+|++..
T Consensus       449 WSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~--~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  449 WSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGK--LLAVGDANGTTHILKLSE  517 (555)
T ss_pred             EcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCc--EEEEecCCCcEEEEEcCc
Confidence            99965 567778889999999998877676666666666778888999898  899999999999999864

>KOG1524|consensus

Probab=99.82  E-value=1.7e-18  Score=153.28  Aligned_cols=265  Identities=17%  Similarity=0.276  Sum_probs=192.0

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-------CCCEEEEEeCCCcEEE
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-------DSKVCFSCCSDGNIAV  229 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i~i  229 (504)
                      .|...+.|+.|+.+...+.+++++-.+.-||+.+............-.  +.+..-+       ....|+.++.||.+.+
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~p--t~~h~~~rs~~~g~~~d~~~i~s~DGkf~i   89 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVP--TDMHLGGRSSGGGKGSDTLLICSNDGRFVI   89 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCC--ccccccccccCCCCCcceEEEEcCCceEEE
Confidence            456667899999888777776555444455554433221111111111  1111111       2347888999999999


Q ss_pred             EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      .+ +.++..+.+..|.+.+.+-.|+|||.-|+++++||.|++|.-. |-+               .....+....|.|++
T Consensus        90 l~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-GML---------------RStl~Q~~~~v~c~~  152 (737)
T KOG1524|consen   90 LN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-GML---------------RSTVVQNEESIRCAR  152 (737)
T ss_pred             ec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-chH---------------HHHHhhcCceeEEEE
Confidence            98 6788888899999999999999999999999999999999854 332               233345677899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      |.|+.+.++.+ ..+.+.+=.+...  ........|.+-|.++.|++...  ++++++.|-..++||....      ..+
T Consensus       153 W~p~S~~vl~c-~g~h~~IKpL~~n--~k~i~WkAHDGiiL~~~W~~~s~--lI~sgGED~kfKvWD~~G~------~Lf  221 (737)
T KOG1524|consen  153 WAPNSNSIVFC-QGGHISIKPLAAN--SKIIRWRAHDGLVLSLSWSTQSN--IIASGGEDFRFKIWDAQGA------NLF  221 (737)
T ss_pred             ECCCCCceEEe-cCCeEEEeecccc--cceeEEeccCcEEEEeecCcccc--ceeecCCceeEEeecccCc------ccc
Confidence            99998877765 3456766666554  45667788999999999999998  8999999999999997643      233


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ....|+.+|++++|.|+ +.++.++. +++++             .....+.|..++||+||..++.|+..|.+.+-
T Consensus       222 ~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~-------------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  222 TSAAEEYAITSVAFNPE-KDYLLWSY-NTARF-------------SSPRVGSIFNLSWSADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             cCChhccceeeeeeccc-cceeeeee-eeeee-------------cCCCccceEEEEEcCCCceeeccccCceEEEe
Confidence            44468899999999999 66666543 23331             12345679999999999999999999977654

>KOG1517|consensus

Probab=99.82  E-value=1.5e-18  Score=165.44  Aligned_cols=290  Identities=17%  Similarity=0.202  Sum_probs=202.3

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC---CCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCCC--
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH---TDGASCIDISA--DGTKLWTGGLDNTVRSWDLREG--  277 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h---~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~--  277 (504)
                      .-..+.|+|-...++++.....|+|||.+.++.+..|..+   ...|+.+.+-.  |..++++++.||.|+||+--..  
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            3456788888889999988889999999999998887654   35688888865  4568999999999999975432  


Q ss_pred             -ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        278 -CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                       +.++...-..     +.... ....+.-.-+.|..+..+|++++.-..|+|||........... ......++++.-+.
T Consensus      1146 ~~~eLVTaw~~-----Ls~~~-~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP-~~s~t~vTaLS~~~ 1218 (1387)
T KOG1517|consen 1146 KKPELVTAWSS-----LSDQL-PGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIP-YGSSTLVTALSADL 1218 (1387)
T ss_pred             CCceeEEeecc-----ccccC-ccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecc-cCCCccceeecccc
Confidence             1111111000     00000 0111112456788877778877778899999998764322222 22344566666554


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE-EEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l~~~~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      ... .++++|..||.+++||.+.......+...+.+....+|..+.+.+.|-. |++|+.+|.|++||++..........
T Consensus      1219 ~~g-n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~i 1297 (1387)
T KOG1517|consen 1219 VHG-NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTI 1297 (1387)
T ss_pred             cCC-ceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCccccccee
Confidence            442 2899999999999999998766655555554444444999999987755 99999999999999997432222222


Q ss_pred             cCC---CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec-------CCceEEEEEccCCCEEEEecCCCC
Q psy17188        436 TSS---APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-------TDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       436 ~~~---~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..|   .+..+++..+++...+|+|+. +.|+||++. |+.+..++.+       .+.+.|++|+|-.-.|++|+.|.+
T Consensus      1298 v~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~ 1374 (1387)
T KOG1517|consen 1298 VAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADST 1374 (1387)
T ss_pred             eeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCce
Confidence            222   225899999999999999998 899999985 4444444322       246799999999888888888764

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.82  E-value=2.2e-18  Score=163.04  Aligned_cols=236  Identities=20%  Similarity=0.208  Sum_probs=166.9

Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      +..|.+||.+... .+.+..|...+...+|+|||+.|+..+.+   ..|++||+.+++....                ..
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l----------------~~  245 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV----------------AS  245 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE----------------ec
Confidence            4689999986554 45566788889999999999999887654   3799999988764321                11


Q ss_pred             cCCceEEEEEcCCCCEEEEEe-CCCcEEEE--eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGG-EASNLSIW--DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~--d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      .......++|+|||+.|+++. .+|.+.+|  |+.++.   ...+..+...+....|+||++. ++.+...++..++|++
T Consensus       246 ~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~-i~f~s~~~g~~~I~~~  321 (429)
T PRK01742        246 FRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT---PSQLTSGAGNNTEPSWSPDGQS-ILFTSDRSGSPQVYRM  321 (429)
T ss_pred             CCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC---eEeeccCCCCcCCEEECCCCCE-EEEEECCCCCceEEEE
Confidence            122234689999999888764 67765555  555443   2334445557889999999986 3334456778888887


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      .........  .   .+..  ....|+|||++|+..+.++ +.+||+.+++.......  .  ....+.|+|||++|+++
T Consensus       322 ~~~~~~~~~--l---~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~--~--~~~~~~~sPdG~~i~~~  389 (429)
T PRK01742        322 SASGGGASL--V---GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST--F--LDESPSISPNGIMIIYS  389 (429)
T ss_pred             ECCCCCeEE--e---cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC--C--CCCCceECCCCCEEEEE
Confidence            653322111  1   1122  3578999999998887754 66799987764432211  1  12456899999999999


Q ss_pred             eCCCcEEEEEc--CCcceEEEEeecCCceEEEEEccC
Q psy17188        458 CSDGNIAVWDL--HNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       458 ~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      +.++.+.+|++  .+|+.+..+..|.+.+..++|+|-
T Consensus       390 s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        390 STQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            99998888876  368888889888888999999984

>KOG0771|consensus

Probab=99.81  E-value=1.1e-17  Score=144.44  Aligned_cols=190  Identities=21%  Similarity=0.269  Sum_probs=146.1

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188        306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP  385 (504)
Q Consensus       306 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~  385 (504)
                      ..++|+.+|..|++++.||++++|+..+.  ........|...|.++.|+||++  ++++-+.| ..++|+.+++.....
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~--~t~l~e~~~~~eV~DL~FS~dgk--~lasig~d-~~~VW~~~~g~~~a~  222 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSM--LTILEEIAHHAEVKDLDFSPDGK--FLASIGAD-SARVWSVNTGAALAR  222 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcc--hhhhhhHhhcCccccceeCCCCc--EEEEecCC-ceEEEEeccCchhhh
Confidence            78999999999999999999999997765  45566677888999999999999  78888888 999999998732222


Q ss_pred             ccccccccCCCceEEEEEcCCC-----CEEEEeeCCCcEEEeeCCCCCc---ceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        386 VSQLDCLQRDNYIRSVKLLPDG-----RTLIVGGEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~s~~g-----~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      .   .....+.....+.|+.|+     ...+....-+.|..|++.....   ............|++++.++||+++|.|
T Consensus       223 ~---t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlG  299 (398)
T KOG0771|consen  223 K---TPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALG  299 (398)
T ss_pred             c---CCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEe
Confidence            2   223345556678888776     2333333445677776654332   1222223334569999999999999999


Q ss_pred             eCCCcEEEEEcCCcceEEEEe-ecCCceEEEEEccCCCEEEEecCCC
Q psy17188        458 CSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       458 ~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +.||.|-|++..+.+.++-.+ .|...|+.+.|+||.+++++.+.|.
T Consensus       300 T~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~  346 (398)
T KOG0771|consen  300 TMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDN  346 (398)
T ss_pred             ccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCC
Confidence            999999999999988876554 6999999999999999999887765

>KOG0644|consensus

Probab=99.81  E-value=7e-20  Score=170.16  Aligned_cols=272  Identities=15%  Similarity=0.257  Sum_probs=205.1

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....+.+|...|+|+.|...|.++++|+.|..++||..+++.++...+||.+.|+.++.+.++.++++++.|..|++|.+
T Consensus       182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence            35567799999999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce-eee-ccCCCceeeE
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK-AEL-TSSAPACYAL  352 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~-~~~~~~i~~~  352 (504)
                      ..+..               .-...+|.+.|++++|+|-.    +.+.||++++||.+-.-.... ... ......+.++
T Consensus       262 ~~~~p---------------vsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~  322 (1113)
T KOG0644|consen  262 PDGAP---------------VSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSI  322 (1113)
T ss_pred             CCCch---------------HHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeee
Confidence            98873               44456899999999999964    677899999999872110000 011 1122345556


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      .+..++.  -+.+++.++.-+.|.+.....           +...+.-+.++.|- .+.+++-.+-.+++|++.++... 
T Consensus       323 ~~~~~~~--~f~Tgs~d~ea~n~e~~~l~~-----------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~-  388 (1113)
T KOG0644|consen  323 LFENNGD--RFLTGSRDGEARNHEFEQLAW-----------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL-  388 (1113)
T ss_pred             ecccccc--ccccccCCcccccchhhHhhh-----------hccceEEEeccccccccceeeeeeeEeeeeecccchhh-
Confidence            6666665  688999999888887653211           11111122222222 35556666777999999877543 


Q ss_pred             eecccCCCCceeEEEECCCCC-EEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        432 KAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                       ....+|...+..|.++|-.. ...+++.||...|||+-.|..++.+.-..+.+..-.||+||..++...
T Consensus       389 -H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd  457 (1113)
T KOG0644|consen  389 -HNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSD  457 (1113)
T ss_pred             -hhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCC
Confidence             44567777888999999554 445899999999999999988876654456777889999998776543

>KOG1517|consensus

Probab=99.81  E-value=1.1e-17  Score=159.59  Aligned_cols=296  Identities=13%  Similarity=0.212  Sum_probs=207.4

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee-ecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECC----
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLH----  233 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~----  233 (504)
                      .-..+.|+|-...++++.+.-.|++||.+.++....+.. ......|+.+.+-.  |..++++++.||.|+||+--    
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            456788999888999998788999999987653211111 12244588888865  45589999999999999742    


Q ss_pred             -CCeEEEeecCC-------CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce
Q psy17188        234 -NQTLVRQFQGH-------TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI  305 (504)
Q Consensus       234 -~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  305 (504)
                       ..+++..+.+-       .+.=.-++|.....+|++++.-..|+|||.....+. .++.             ......+
T Consensus      1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~-~diP-------------~~s~t~v 1211 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVV-ADIP-------------YGSSTLV 1211 (1387)
T ss_pred             CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeE-eecc-------------cCCCccc
Confidence             23444433221       111134567776667777777889999999876532 1111             1233445


Q ss_pred             EEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCcc-ceeeeccCCCc--eeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        306 RSVKLLP-DGRTLIVGGEASNLSIWDLASPTPR-IKAELTSSAPA--CYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       306 ~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~-~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      +++.-+. .|+.+++|..||.+++||.+..... .......|...  |..+.+.+.|-. -+++++.+|.|++||++...
T Consensus      1212 TaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~-elvSgs~~G~I~~~DlR~~~ 1290 (1387)
T KOG1517|consen 1212 TALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLG-ELVSGSQDGDIQLLDLRMSS 1290 (1387)
T ss_pred             eeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCc-ceeeeccCCeEEEEecccCc
Confidence            6655443 5799999999999999999876432 23344455555  889999887765 69999999999999999864


Q ss_pred             CCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee----cccCCCCceeEEEECCCCCEEEEe
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA----ELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      ....+........++..+++..+++...+|+|+. +.|+||++.........    ........+.+++|+|..-++|+|
T Consensus      1291 ~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG 1369 (1387)
T KOG1517|consen 1291 KETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAG 1369 (1387)
T ss_pred             ccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhc
Confidence            4444433333333446899999999999999988 99999998754322111    122344567999999999999999


Q ss_pred             eCCCcEEEEEcCCcc
Q psy17188        458 CSDGNIAVWDLHNQT  472 (504)
Q Consensus       458 ~~dg~i~iwd~~~~~  472 (504)
                      +.|..|.||...+..
T Consensus      1370 ~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1370 SADSTVSIYSCEKPR 1384 (1387)
T ss_pred             cCCceEEEeecCCcC
Confidence            999999999876654

>KOG0649|consensus

Probab=99.81  E-value=4e-17  Score=130.42  Aligned_cols=264  Identities=18%  Similarity=0.267  Sum_probs=187.5

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCC----------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHN----------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      .|.+-+|+|.+++|++|..+|.|.+..+.+          ...+...++|.++|+.++|.  ..+|++++ ||.|+-|..
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence            466778999999999999999999998864          23455568899999999998  33677766 599999987


Q ss_pred             CCCc-----eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        275 REGC-----VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       275 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      +...     -+.|+...+....       ...-..|+++-..|..+.++.++.|+.++-||++++  .....+.+|...+
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~-------~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G--~i~r~~rGHtDYv  159 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVD-------AVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG--RIQREYRGHTDYV  159 (325)
T ss_pred             hhhhhhccchhhhhhcCccccC-------cccCCccceeEeccCCCcEEEecCCeEEEEEEecCC--EEEEEEcCCccee
Confidence            6432     1233333322111       112245889999998888888889999999999998  7788899999999


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc-----cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL-----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-----~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      .++..-....  -+.+|+.||++|+||.++.+....+...+..     .....|-+++.+  ..+|++|+ ...+.+|.+
T Consensus       160 H~vv~R~~~~--qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhL  234 (325)
T KOG0649|consen  160 HSVVGRNANG--QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHL  234 (325)
T ss_pred             eeeeecccCc--ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecC-CCceeEEec
Confidence            9998833333  4899999999999999987654433322211     123345555554  55888875 456999999


Q ss_pred             CCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        425 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      +..+....+.++++...   +.|.  .+.+++++....+.-|.+. |.+-...+......++..|+.
T Consensus       235 rsse~t~vfpipa~v~~---v~F~--~d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~  295 (325)
T KOG0649|consen  235 RSSESTCVFPIPARVHL---VDFV--DDCVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQT  295 (325)
T ss_pred             cCCCceEEEecccceeE---eeee--cceEEEeccccceeeeeec-cEEEEeccCCccceeeecccC
Confidence            99998888888876544   4774  4577788877788888763 444444443333445555543

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.81  E-value=2.9e-16  Score=143.55  Aligned_cols=320  Identities=18%  Similarity=0.179  Sum_probs=186.0

Q ss_pred             EEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceE
Q psy17188        129 YTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  207 (504)
Q Consensus       129 ~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~  207 (504)
                      ++-. ++.|.|.|.++.+   .+..+..  ....-..+.|+|||+++++++.||.|.++|+.+.+.  ...+.... ...
T Consensus        10 V~~~~~~~v~viD~~t~~---~~~~i~~--~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~--v~~i~~G~-~~~   81 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNK---VVARIPT--GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKV--VATIKVGG-NPR   81 (369)
T ss_dssp             EEEGGGTEEEEEETTT-S---EEEEEE---STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSE--EEEEE-SS-EEE
T ss_pred             EEecCCCEEEEEECCCCe---EEEEEcC--CCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccE--EEEEecCC-Ccc
Confidence            3444 8999999987743   3333322  222334578999999999999999999999998763  44444333 357


Q ss_pred             EEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEeecCC-------CCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCc
Q psy17188        208 ALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGH-------TDGASCIDISADGTKLWTGG-LDNTVRSWDLREGC  278 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~  278 (504)
                      .+++++||++++++. .++.+.++|.++.+.++.+...       ...+..+..+|....++..- .-+.|.+.|....+
T Consensus        82 ~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~  161 (369)
T PF02239_consen   82 GIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPK  161 (369)
T ss_dssp             EEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSS
T ss_pred             eEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccc
Confidence            899999999888775 6889999999999998887542       34677888888777555544 44788888876643


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeecc--CCCceeeEEEC
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTS--SAPACYALAIS  355 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~  355 (504)
                      ..              ...............|+|++++++++ ..+..+.++|.++.+.........  |..+...+ .+
T Consensus       162 ~~--------------~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-ph  226 (369)
T PF02239_consen  162 NL--------------KVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PH  226 (369)
T ss_dssp             CE--------------EEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EE
T ss_pred             cc--------------ceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cC
Confidence            11              22233345567789999999988775 556789999988765433322211  22222222 12


Q ss_pred             CCCCCceeeeccCCC--------eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe----eCCCcEEEee
Q psy17188        356 PDSKSPFFSSHHYKS--------CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG----GEASNLSIWD  423 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~--------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~----~~dg~i~iwd  423 (504)
                      |.....+...+....        .+.+||....   +.+..+.   ..+.-.-+..+|+++++.+.    ...+.|.++|
T Consensus       227 p~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w---kvv~~I~---~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD  300 (369)
T PF02239_consen  227 PGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW---KVVKTIP---TQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVID  300 (369)
T ss_dssp             TTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT---SEEEEEE----SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEE
T ss_pred             CCcceEEeeccccceecccccCCccccchhhcC---eEEEEEE---CCCCcceeecCCCCccEEeeccCCCCCceEEEEE
Confidence            222110111111122        2223333221   1111121   12222678889999999997    4457899999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC--CcEEEEEcCCcceEEEEe
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--GNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~  478 (504)
                      .++.+......... ...+..+.|++||+++..+..+  +.|.|||..+.+++.++.
T Consensus       301 ~~tl~~~~~i~~~~-~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  301 KKTLKVVKTITPGP-GKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             CCGTEEEE-HHHHH-T--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred             CcCcceeEEEeccC-CCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence            99764333332211 2248889999999987765544  469999999999999887

...

>KOG1334|consensus

Probab=99.80  E-value=1.8e-18  Score=151.50  Aligned_cols=296  Identities=15%  Similarity=0.260  Sum_probs=217.7

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      .|.+.|+.+.|+..|..|++|+.|..|.+||+...+... .-..+|...|....|-|  +...+++++.||.+++=.+..
T Consensus       140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l-~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~  218 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKL-SFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILE  218 (559)
T ss_pred             CCCCccceeeecccCceeeccCccceEEeehhhccCccc-ccccccccchhhhhccCCCCCcCceeccccCceeeeeecc
Confidence            799999999999999999999999999999999876543 33567888888888988  445899999999999877654


Q ss_pred             C-eE--EEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc-C---CceE
Q psy17188        235 Q-TL--VRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR-D---NYIR  306 (504)
Q Consensus       235 ~-~~--~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~v~  306 (504)
                      . .+  ...+..|.++|.-++.-|+ ...|.+++.|+.+.-+|++.+....             .+.+... .   -...
T Consensus       219 t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~-------------~~~cr~~~~~~~v~L~  285 (559)
T KOG1334|consen  219 TGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE-------------KFVCREADEKERVGLY  285 (559)
T ss_pred             ccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccc-------------eeeeeccCCccceeee
Confidence            3 22  3345569999999999995 4578999999999999998765211             1111111 1   2467


Q ss_pred             EEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccc----------eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEE
Q psy17188        307 SVKLLPDG-RTLIVGGEASNLSIWDLASPTPRI----------KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVW  375 (504)
Q Consensus       307 ~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~  375 (504)
                      +++..|.. ..+++++.|..+++||.+.-....          ..........|++++++.++..  +.+...|-.|+++
T Consensus       286 ~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sE--lLaSYnDe~IYLF  363 (559)
T KOG1334|consen  286 TIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSE--LLASYNDEDIYLF  363 (559)
T ss_pred             eEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccc--eeeeecccceEEe
Confidence            88899955 479999999999999987543221          1111234557999999987774  4555567778888


Q ss_pred             ecCCCCC--CC-------cccc-cccccCCCceEEEEE-cCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188        376 DISQPGS--KT-------PVSQ-LDCLQRDNYIRSVKL-LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  444 (504)
Q Consensus       376 d~~~~~~--~~-------~~~~-~~~~~~~~~i~~~~~-s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  444 (504)
                      .-..+..  ..       ..+. .+.+.....|..+-| -|...++++|+.-|.|.||+-.+++.+...+...|  .|+|
T Consensus       364 ~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~--VVNC  441 (559)
T KOG1334|consen  364 NKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH--VVNC  441 (559)
T ss_pred             ccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc--eEec
Confidence            5432221  00       1111 222223344666655 57889999999999999999998876666555544  7999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        445 LAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       445 l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      |.-+|--..||+.+-|..|+||.-.+
T Consensus       442 LEpHP~~PvLAsSGid~DVKIWTP~~  467 (559)
T KOG1334|consen  442 LEPHPHLPVLASSGIDHDVKIWTPLT  467 (559)
T ss_pred             cCCCCCCchhhccCCccceeeecCCc
Confidence            99999999999999999999998644

>KOG2139|consensus

Probab=99.80  E-value=1.9e-16  Score=133.83  Aligned_cols=305  Identities=14%  Similarity=0.170  Sum_probs=192.7

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~  190 (504)
                      +-.+..++|++.-.-++++. |..|++|+-.. .....++.    .....|+|++|-|. +.-|+.|+. +-|++|..+.
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks----~sQrnvtclawRPlsaselavgCr-~gIciW~~s~  171 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKS----VSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSR  171 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecc----hhhcceeEEEeccCCcceeeeeec-ceeEEEEcCc
Confidence            34567788998655556666 99999999765 22222222    34567999999994 456777765 5699998753


Q ss_pred             CC------------ccceeeeecCcCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        191 PT------------PRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       191 ~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      .-            .......++| ..|+++.|++||..+++++. |..|.|||.+++..+.......+.++-+.|+||+
T Consensus       172 tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdg  250 (445)
T KOG2139|consen  172 TLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDG  250 (445)
T ss_pred             ccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCC
Confidence            21            1112233455 67999999999999998875 5679999999998877665567889999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      .+|+++.-|+..++|+....-.               ........+.|...+|+|+|++|+.... |.-.+|.+.-....
T Consensus       251 d~lfaAt~davfrlw~e~q~wt---------------~erw~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~  314 (445)
T KOG2139|consen  251 DVLFAATCDAVFRLWQENQSWT---------------KERWILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGED  314 (445)
T ss_pred             CEEEEecccceeeeehhcccce---------------ecceeccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCC
Confidence            9999999999999996543321               1222233458999999999998877654 33344544322111


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      ...                      .-.++.....-+-|+..-.....     ..--.+++.+++|.|.|.+||+.-+.+
T Consensus       315 ~~~----------------------~~~~~~k~~lliaDL~e~ti~ag-----~~l~cgeaq~lawDpsGeyLav~fKg~  367 (445)
T KOG2139|consen  315 SVF----------------------LRPQSIKRVLLIADLQEVTICAG-----QRLCCGEAQCLAWDPSGEYLAVIFKGQ  367 (445)
T ss_pred             ccc----------------------cCcccceeeeeeccchhhhhhcC-----cccccCccceeeECCCCCEEEEEEcCC
Confidence            100                      00111222233333322111000     001245677999999999999976654


Q ss_pred             c--------EEEeeCCCCCcceee--cccCCCCceeEEEECC---CCCEEEEeeCCCcEEEEEc
Q psy17188        418 N--------LSIWDLASPTPRIKA--ELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       418 ~--------i~iwd~~~~~~~~~~--~~~~~~~~v~~l~~s~---~~~~l~s~~~dg~i~iwd~  468 (504)
                      .        |.+||.+..-.....  .+.... .-..+.|+|   ++.+|..+=..|.+.-|++
T Consensus       368 ~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge-~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl  430 (445)
T KOG2139|consen  368 SFVLLCKLHISRFDTRKSPPVELSYCGMIGGE-YPAYISFGPLKNEGRLLSIAWSTGRIQRYPL  430 (445)
T ss_pred             chhhhhhhhhhhhcccccCceEEEecccccCC-CCceEEeeecccCCcEEEEEeccCceEeeee
Confidence            3        777887643322211  111111 123456666   5667777777787777765

>KOG2111|consensus

Probab=99.80  E-value=2.2e-16  Score=131.26  Aligned_cols=272  Identities=16%  Similarity=0.181  Sum_probs=182.5

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC--eEEEEEccCCCEEE-EEcCC------CeEEEEECCC
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG--ASCIDISADGTKLW-TGGLD------NTVRSWDLRE  276 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~-s~~~d------g~i~~wd~~~  276 (504)
                      ...++|+.|...++++..+| .+||+.+--+.....+.+.+.  +..+-|-  .++|+ .|+.+      ..+.|||=..
T Consensus         8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~k   84 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDLK   84 (346)
T ss_pred             eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEeccc
Confidence            44599999998888887665 899998764433322222322  2222222  33444 34433      4799999433


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-CccceeeeccCCCceeeEEEC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-TPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      ..                .........+|.++.+.++  .|++. ..+.|+||..... +..........+..  -.+..
T Consensus        85 ~~----------------~i~el~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkG--lC~~~  143 (346)
T KOG2111|consen   85 ER----------------CIIELSFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKG--LCSLC  143 (346)
T ss_pred             Cc----------------EEEEEEeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCc--eEeec
Confidence            33                3344556778999999876  45555 4578999998743 22222222222222  33344


Q ss_pred             CCCCCceee-eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc-EEEeeCCCCCcceee
Q psy17188        356 PDSKSPFFS-SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKA  433 (504)
Q Consensus       356 ~~~~~~~~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~-i~iwd~~~~~~~~~~  433 (504)
                      |.....+++ =|..-|.|+|-|+......   .......|...|.+++++-+|.++|+++..|+ |+|||..+++.+...
T Consensus       144 ~~~~k~~LafPg~k~GqvQi~dL~~~~~~---~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~  220 (346)
T KOG2111|consen  144 PTSNKSLLAFPGFKTGQVQIVDLASTKPN---APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQEL  220 (346)
T ss_pred             CCCCceEEEcCCCccceEEEEEhhhcCcC---CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeee
Confidence            443332443 4556799999999765432   23344579999999999999999999999998 999999999988887


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc---e---------------------EEEEeecCCceEEEEE
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---L---------------------VRQFQGHTDGASCIDI  489 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~---~---------------------~~~~~~h~~~v~~~~~  489 (504)
                      .-......|.+++|||+..+||++|+.|+++||.++...   .                     +..++-..+...-++|
T Consensus       221 RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~f  300 (346)
T KOG2111|consen  221 RRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAF  300 (346)
T ss_pred             ecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEe
Confidence            777777889999999999999999999999999886522   1                     0112222345556778


Q ss_pred             ccCCCEEEEecCCCC
Q psy17188        490 SADGTKLWTGGLDNT  504 (504)
Q Consensus       490 s~d~~~l~s~s~Dgt  504 (504)
                      -.+.+.++..+.||+
T Consensus       301 g~~~nsvi~i~~Dgs  315 (346)
T KOG2111|consen  301 GSETNTVIAICADGS  315 (346)
T ss_pred             cCCCCeEEEEEeCCc
Confidence            777677777777775

>KOG1523|consensus

Probab=99.80  E-value=3e-17  Score=136.45  Aligned_cols=246  Identities=16%  Similarity=0.216  Sum_probs=180.7

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC-ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CC
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQ  235 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~  235 (504)
                      -..+|+|.+|++|...+|.+.....|.||.....+ .+...++..|...|++++|+|..+.|++++.|..-++|... .+
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            35789999999999999999999999999998877 67788899999999999999999999999999999999984 33


Q ss_pred             --eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        236 --TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       236 --~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                        +..-.+..++..++++.|+|.++.+++|+.-..|.+|-++...-  |         .+...........|.++.|+|+
T Consensus        89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENd--W---------WVsKhikkPirStv~sldWhpn  157 (361)
T KOG1523|consen   89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEND--W---------WVSKHIKKPIRSTVTSLDWHPN  157 (361)
T ss_pred             eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccc--e---------ehhhhhCCccccceeeeeccCC
Confidence              33344555899999999999999999999999999998876531  0         0112223445677999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc--ccc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ--LDC  391 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~  391 (504)
                      +-+|++|+.|+..++|..--.      ......      +-.|-+.                  +     .++-.  .+.
T Consensus       158 nVLlaaGs~D~k~rVfSayIK------~Vdekp------ap~pWgs------------------k-----~PFG~lm~E~  202 (361)
T KOG1523|consen  158 NVLLAAGSTDGKCRVFSAYIK------GVDEKP------APTPWGS------------------K-----MPFGQLMSEA  202 (361)
T ss_pred             cceecccccCcceeEEEEeee------ccccCC------CCCCCcc------------------C-----CcHHHHHHhh
Confidence            999999999999999864211      111100      0011111                  0     01100  111


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      ....+.+..+.|+|+|..|+-.+.|..+.+-|...+.+... .......+..++.|-.+
T Consensus       203 ~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~-~~~~~~lP~ls~~~ise  260 (361)
T KOG1523|consen  203 SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQ-SVATAQLPLLSVSWISE  260 (361)
T ss_pred             ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhcc-chhhccCCceeeEeecC
Confidence            13467889999999999999999999999999876653222 22222245566666544

>KOG2110|consensus

Probab=99.79  E-value=6.6e-17  Score=137.07  Aligned_cols=240  Identities=13%  Similarity=0.149  Sum_probs=171.1

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCceEE
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCVKV  281 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~  281 (504)
                      ..+..+.|+.+...|..|+.|| .++|+................|..+-|+.  .+++..+.+  +.+++.+.+.+.   
T Consensus         6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~---   79 (391)
T KOG2110|consen    6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKT---   79 (391)
T ss_pred             cceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCc---
Confidence            4466777999998999998887 67887766544222222333455666664  355555544  358888887765   


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec-cCCCceeeEEECCCCCC
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKS  360 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~  360 (504)
                                   .+........|.++.++.+  +|++.-++ .|+|||+++.+........ .+...+..++.++.+..
T Consensus        80 -------------~ICe~~fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~y  143 (391)
T KOG2110|consen   80 -------------TICEIFFPTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCY  143 (391)
T ss_pred             -------------eEEEEecCCceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCce
Confidence                         3334455677888888754  56666554 4999999987544433333 33334555555555554


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc-EEEeeCCCCCcceeecccCCC
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSA  439 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~  439 (504)
                      +.+-.....|.|.+||..+-....     ....|.+.+.+++|+++|.+||++++.|+ |++|.+.+++....+.-....
T Consensus       144 lAyp~s~t~GdV~l~d~~nl~~v~-----~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~  218 (391)
T KOG2110|consen  144 LAYPGSTTSGDVVLFDTINLQPVN-----TINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYP  218 (391)
T ss_pred             EEecCCCCCceEEEEEcccceeee-----EEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCcee
Confidence            444455567999999987643322     23379999999999999999999999998 899999999877766655556


Q ss_pred             CceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        440 PACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ..|.+++|+||+++|++.+..++|+||.++.
T Consensus       219 ~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  219 VSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             eEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            6789999999999999999999999998754

>KOG1240|consensus

Probab=99.79  E-value=7.3e-17  Score=156.57  Aligned_cols=345  Identities=16%  Similarity=0.188  Sum_probs=210.2

Q ss_pred             ccceeee-cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCC--CceeeeeecCCCCceEEEEEccCCCEEEEec
Q psy17188        104 ARQINTL-SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSK--TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  178 (504)
Q Consensus       104 ~~~~~~~-~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  178 (504)
                      +..+..+ .|+..|..++.+++. .++++|+ ||+|++|+...-...  .....+......+.+.++...+.++.+|+++
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence            4455555 899999999988754 9999999 999999998653322  2222233334678899999999999999999


Q ss_pred             CCCcEEEEeCCCCCcc-------ceeeeecCcCceEEEEECC-CCC-EEEEEeCCCcEEEEECCCCeEEEeecC--CCCC
Q psy17188        179 EASNLSIWDLASPTPR-------IKAELTSSAPACYALAISP-DSK-VCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDG  247 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~-------~~~~~~~~~~~v~~~~~s~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~--h~~~  247 (504)
                      .||.|++.+++..+..       .+........-|..-+|.. ++. .|+.+...+.|..||++......+++.  ..+.
T Consensus      1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~ 1197 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGL 1197 (1431)
T ss_pred             CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccc
Confidence            9999999998762211       1111222222333444443 233 788888899999999998766655542  4578


Q ss_pred             eEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC---CCCEEEEEe--C
Q psy17188        248 ASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGG--E  322 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~--~  322 (504)
                      |++++.+|.+++++.|+..|.+.+||++-+...              ......+..++..+..+|   .....++++  .
T Consensus      1198 vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i--------------~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~ 1263 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPI--------------LSWEHPARAPIRHVWLCPTYPQESVSVSAGSSS 1263 (1431)
T ss_pred             eeEEEecCCceEEEEecCCceEEEEEeecCcee--------------ecccCcccCCcceEEeeccCCCCceEEEecccC
Confidence            999999999999999999999999999976532              122233446677777766   234455443  4


Q ss_pred             CCcEEEEeCCCCCccceeeec-----------cC----CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        323 ASNLSIWDLASPTPRIKAELT-----------SS----APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       323 dg~i~v~d~~~~~~~~~~~~~-----------~~----~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      .+.+.+|++.++.........           ..    ...+..+.........++.+++.|..|+.||...+....   
T Consensus      1264 ~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss--- 1340 (1431)
T KOG1240|consen 1264 NNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISS--- 1340 (1431)
T ss_pred             CCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccccc---
Confidence            678999999887543322221           10    112222222222233388999999999999987653321   


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe-eCCCC-----------CcceeecccCCCCceeEEEECCC-CCEE
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW-DLASP-----------TPRIKAELTSSAPACYALAISPD-SKVC  454 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw-d~~~~-----------~~~~~~~~~~~~~~v~~l~~s~~-~~~l  454 (504)
                       ....+..........+. +..++.++.--...+- ....+           ..........|...|+++++... ..+|
T Consensus      1341 -~~~~~~s~~~~~~~~s~-~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~ll 1418 (1431)
T KOG1240|consen 1341 -YAVPGPSTSYSTNSESY-DLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLL 1418 (1431)
T ss_pred             -ccccCccccccccchhc-cccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEE
Confidence             00000000111111111 1112222111000000 00000           00111123356678888887764 4588


Q ss_pred             EEeeCCCcEEEEE
Q psy17188        455 FSCCSDGNIAVWD  467 (504)
Q Consensus       455 ~s~~~dg~i~iwd  467 (504)
                      ++++.||.|+||.
T Consensus      1419 vs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1419 VSSSRDGVIKIWK 1431 (1431)
T ss_pred             EEecCCCeeeecC
Confidence            8999999999994

>KOG2110|consensus

Probab=99.79  E-value=1.3e-15  Score=129.34  Aligned_cols=326  Identities=13%  Similarity=0.165  Sum_probs=206.8

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC--CcEEEEeCCCC
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASP  191 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~~~  191 (504)
                      ..+..+.|..+..+|..|+..-.++|+.+.-+.     ..........|--+-|+  ..++|..+.+  +.+++++++..
T Consensus         6 ~ti~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k-----~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~   78 (391)
T KOG2110|consen    6 PTINFIGFNQDSTLLSVGSKDGYKIFSCSPFEK-----CFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKK   78 (391)
T ss_pred             cceeeeeeccceeEEEccCCCceeEEecCchHH-----hhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccC
Confidence            456677799999999999966678888765322     11111223345555565  4455555433  45899998765


Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC---CCCCeEEEEEccCCCEEEEEc--CC
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---HTDGASCIDISADGTKLWTGG--LD  266 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~--~d  266 (504)
                      .......   ....|.++.++.+  .|+++-++ .|+|||+++.+++.++..   +...+.++.+++.+.+|+--+  ..
T Consensus        79 ~~ICe~~---fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~  152 (391)
T KOG2110|consen   79 TTICEIF---FPTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTS  152 (391)
T ss_pred             ceEEEEe---cCCceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCC
Confidence            5333222   3345888888654  56666554 499999999999988864   445566666776777887533  35


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCCccceeeeccC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~~~~~  345 (504)
                      |.|.+||..+-+.               ......|++.+.+++|+++|.+|+++++.|+ |+|+.+.+++..........
T Consensus       153 GdV~l~d~~nl~~---------------v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~  217 (391)
T KOG2110|consen  153 GDVVLFDTINLQP---------------VNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY  217 (391)
T ss_pred             ceEEEEEccccee---------------eeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce
Confidence            8899999887653               3344589999999999999999999999997 89999998866555555555


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDL  424 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~  424 (504)
                      ...|.+++|+|+++  ++.+.+..++|.+|.++............   ...  ..-.++   +. +++- -.+.-.+||.
T Consensus       218 ~~~IySL~Fs~ds~--~L~~sS~TeTVHiFKL~~~~~~~~~~p~~---~~~--~~~~~s---k~-~~sylps~V~~~~~~  286 (391)
T KOG2110|consen  218 PVSIYSLSFSPDSQ--FLAASSNTETVHIFKLEKVSNNPPESPTA---GTS--WFGKVS---KA-ATSYLPSQVSSVLDQ  286 (391)
T ss_pred             eeEEEEEEECCCCC--eEEEecCCCeEEEEEecccccCCCCCCCC---CCc--ccchhh---hh-hhhhcchhhhhhhhh
Confidence            66899999999999  89999999999999997643211110000   000  000000   00 0000 0111223554


Q ss_pred             CCCCcceeecccCCC-CceeEEEECCCCCEEEEeeCCCcEEEEEcCC--cceEEEEeec
Q psy17188        425 ASPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHN--QTLVRQFQGH  480 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~-~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~h  480 (504)
                      ...  .....+.... ..+..+.-.+...++..++.||.++.|.+.-  |.....++.|
T Consensus       287 ~R~--FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h  343 (391)
T KOG2110|consen  287 SRK--FATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEGGECALIKRH  343 (391)
T ss_pred             ccc--eeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCCceeEEEEee
Confidence            422  2222222221 1233333335778999999999999998743  4444444444

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.78  E-value=2.7e-17  Score=155.74  Aligned_cols=235  Identities=19%  Similarity=0.214  Sum_probs=155.3

Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCeE--EEeecCCCCCeEEEEEc
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTL--VRQFQGHTDGASCIDIS  254 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~  254 (504)
                      +..|++||.+...   ...+..+...+...+|+|||+.|+..+.+   ..|++||+.+++.  +..+.+|   ...++|+
T Consensus       183 ~~~i~i~d~dg~~---~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wS  256 (429)
T PRK01742        183 PYEVRVADYDGFN---QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFS  256 (429)
T ss_pred             eEEEEEECCCCCC---ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeEC
Confidence            4689999987654   34456677789999999999999887654   3699999988753  3334433   3468999


Q ss_pred             cCCCEEEEEc-CCCeEEE--EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEe
Q psy17188        255 ADGTKLWTGG-LDNTVRS--WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWD  330 (504)
Q Consensus       255 ~~~~~l~s~~-~dg~i~~--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d  330 (504)
                      |||+.|+.++ .+|.+.+  ||+.+++..                ....+...+....|+|||+.|+..+ .++..++|+
T Consensus       257 PDG~~La~~~~~~g~~~Iy~~d~~~~~~~----------------~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~  320 (429)
T PRK01742        257 PDGSRLAFASSKDGVLNIYVMGANGGTPS----------------QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYR  320 (429)
T ss_pred             CCCCEEEEEEecCCcEEEEEEECCCCCeE----------------eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEE
Confidence            9999888764 6776555  466665532                1223344577899999999877654 577888887


Q ss_pred             CCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE
Q psy17188        331 LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  410 (504)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l  410 (504)
                      +........ .+ .+..  ....|+|+++.  ++..+.++ +.+||+..+........       .....+.|+|||++|
T Consensus       321 ~~~~~~~~~-~l-~~~~--~~~~~SpDG~~--ia~~~~~~-i~~~Dl~~g~~~~lt~~-------~~~~~~~~sPdG~~i  386 (429)
T PRK01742        321 MSASGGGAS-LV-GGRG--YSAQISADGKT--LVMINGDN-VVKQDLTSGSTEVLSST-------FLDESPSISPNGIMI  386 (429)
T ss_pred             EECCCCCeE-Ee-cCCC--CCccCCCCCCE--EEEEcCCC-EEEEECCCCCeEEecCC-------CCCCCceECCCCCEE
Confidence            654322221 12 2222  45789999995  44444444 55689876532211111       112367899999999


Q ss_pred             EEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        411 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       411 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      +.++.++.+.+|++.+........+..+...+...+|+|-
T Consensus       387 ~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        387 IYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            9999999888887643222233444556666778899884

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.78  E-value=5.2e-16  Score=146.54  Aligned_cols=234  Identities=14%  Similarity=0.179  Sum_probs=154.6

Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      ..|.++|.+..+.   ..+..+...+...+|+|||+.|+..+.   +..|.+|++.+++.... ....+.+..+.|+|||
T Consensus       179 ~~l~~~d~dg~~~---~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG  254 (429)
T PRK03629        179 YELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDG  254 (429)
T ss_pred             eeEEEEcCCCCCC---EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCC
Confidence            3699999876543   334456667899999999998886542   35699999988854332 2233345568999999


Q ss_pred             CEEEEE-cCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-CcEEEE--eC
Q psy17188        258 TKLWTG-GLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIW--DL  331 (504)
Q Consensus       258 ~~l~s~-~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~v~--d~  331 (504)
                      +.|+.. +.+|  .|++||+.+++.+.                .......+....|+|||+.|+..+.+ +...+|  |+
T Consensus       255 ~~La~~~~~~g~~~I~~~d~~tg~~~~----------------lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~  318 (429)
T PRK03629        255 SKLAFALSKTGSLNLYVMDLASGQIRQ----------------VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNI  318 (429)
T ss_pred             CEEEEEEcCCCCcEEEEEECCCCCEEE----------------ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEEC
Confidence            988754 4454  58899998876431                11223346788999999988776653 333333  33


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      .+++..             .+.                                       ..........|+|||++|+
T Consensus       319 ~~g~~~-------------~lt---------------------------------------~~~~~~~~~~~SpDG~~Ia  346 (429)
T PRK03629        319 NGGAPQ-------------RIT---------------------------------------WEGSQNQDADVSSDGKFMV  346 (429)
T ss_pred             CCCCeE-------------Eee---------------------------------------cCCCCccCEEECCCCCEEE
Confidence            332100             000                                       0011123677899998887


Q ss_pred             EeeCC---CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCc---EEEEEcCCcceEEEEeecCCceE
Q psy17188        412 VGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN---IAVWDLHNQTLVRQFQGHTDGAS  485 (504)
Q Consensus       412 ~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~h~~~v~  485 (504)
                      ..+.+   ..|++||+.+++...... ..   ......|+|||++|+.++.++.   +.++++ +|+....+.+|.+.+.
T Consensus       347 ~~~~~~g~~~I~~~dl~~g~~~~Lt~-~~---~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~  421 (429)
T PRK03629        347 MVSSNGGQQHIAKQDLATGGVQVLTD-TF---LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVK  421 (429)
T ss_pred             EEEccCCCceEEEEECCCCCeEEeCC-CC---CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcC
Confidence            76543   348889988776443322 11   1234589999999999888764   667777 5666677888888899


Q ss_pred             EEEEcc
Q psy17188        486 CIDISA  491 (504)
Q Consensus       486 ~~~~s~  491 (504)
                      ..+|+|
T Consensus       422 ~p~Wsp  427 (429)
T PRK03629        422 FPAWSP  427 (429)
T ss_pred             CcccCC
Confidence            999997

>KOG2315|consensus

Probab=99.78  E-value=7.9e-16  Score=137.70  Aligned_cols=355  Identities=13%  Similarity=0.185  Sum_probs=226.9

Q ss_pred             CCCCCccccceeeecC---CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCE
Q psy17188         97 GPGIPRHARQINTLSH---GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  173 (504)
Q Consensus        97 ~~~~~~~~~~~~~~~h---~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  173 (504)
                      ++..+........+.+   .......++|++|+++|.+.+..++|++.....     ..+.. ... .+.++.|+|-+.+
T Consensus        15 l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~-----~~lt~-~~~-~~~~L~fSP~g~y   87 (566)
T KOG2315|consen   15 LFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSDNQVVKVFEIATLK-----VVLCV-ELK-KTYDLLFSPKGNY   87 (566)
T ss_pred             EeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEcCCeEEEEEccCCc-----EEEEe-ccc-eeeeeeecccccc
Confidence            3444443344444444   445678889999999999999999999987753     11111 122 7899999999999


Q ss_pred             EEEe-----c-----CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188        174 LIVG-----G-----EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  243 (504)
Q Consensus       174 l~~~-----~-----~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  243 (504)
                      |.+-     .     ..-.+.+|++++.............+  +++.|+.|..+.+- -..+.+.+|++.+.+.+.. +-
T Consensus        88 L~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~--W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~~-kl  163 (566)
T KOG2315|consen   88 LLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNG--WVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQH-KL  163 (566)
T ss_pred             cccccccccccCCCCCCCceeeeeeccceehhheehhhhcC--cccccccchhhhhh-hhcceEEEEecCCccceee-ee
Confidence            9872     1     12457899998844333333333332  58899988764432 2356799999887543322 23


Q ss_pred             CCCCeEEEEEccCC--CEEEE-----EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        244 HTDGASCIDISADG--TKLWT-----GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       244 h~~~v~~~~~~~~~--~~l~s-----~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      |...|+.+.++|.+  ..+++     .+.-+.+++|.......          ..++......  ...-..+.|++-|+-
T Consensus       164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~----------~~~~a~ksFF--kadkvqm~WN~~gt~  231 (566)
T KOG2315|consen  164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ----------HQPVANKSFF--KADKVQMKWNKLGTA  231 (566)
T ss_pred             eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc----------cchhhhcccc--ccceeEEEeccCCce
Confidence            67889999999863  34443     34556788887763321          1111111111  122345778887764


Q ss_pred             EEE-Ee--C---------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        317 LIV-GG--E---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       317 l~~-~~--~---------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      |++ ++  -         ..++++++++..   .....-...++|.++.|+++++...++-|-.-..+.|||++...   
T Consensus       232 LLvLastdVDktn~SYYGEq~Lyll~t~g~---s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~---  305 (566)
T KOG2315|consen  232 LLVLASTDVDKTNASYYGEQTLYLLATQGE---SVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP---  305 (566)
T ss_pred             EEEEEEEeecCCCccccccceEEEEEecCc---eEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE---
Confidence            433 21  1         235777777732   11222233569999999999998888888899999999987531   


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeC---CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC--
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--  459 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~--  459 (504)
                       +    ..-..++-+++-|+|.|++|+.++-   .|.|.+||+.+.+.+....  ..  ..+-+.|+|||++++|+..  
T Consensus       306 -v----~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~--a~--~tt~~eW~PdGe~flTATTaP  376 (566)
T KOG2315|consen  306 -V----FDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK--AA--NTTVFEWSPDGEYFLTATTAP  376 (566)
T ss_pred             -e----EeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccc--cC--CceEEEEcCCCcEEEEEeccc
Confidence             1    1123455669999999999887654   5789999999755443332  22  2355799999999998875  


Q ss_pred             ----CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        460 ----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       460 ----dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                          |..++||+. +|..+.... ..+....+.|-|
T Consensus       377 RlrvdNg~Kiwhy-tG~~l~~~~-f~sEL~qv~W~P  410 (566)
T KOG2315|consen  377 RLRVDNGIKIWHY-TGSLLHEKM-FKSELLQVEWRP  410 (566)
T ss_pred             cEEecCCeEEEEe-cCceeehhh-hhHhHhheeeee
Confidence                677999997 455543322 112466666764

>KOG1334|consensus

Probab=99.78  E-value=6.5e-18  Score=148.03  Aligned_cols=296  Identities=16%  Similarity=0.245  Sum_probs=222.0

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCeEEEEEcc--CCCEEEEEcCCCeEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISA--DGTKLWTGGLDNTVRS  271 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~  271 (504)
                      ....+..|.+.|..+.|+..|..|++++.|..|.+||...++....+ .+|...|....|-|  +...+++++.||.+++
T Consensus       134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            35568899999999999999999999999999999999988776665 46888888888988  4567999999999998


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCC----
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSA----  346 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----  346 (504)
                      =.+......            ........|.+.|.-++..|+. .-|.+++.|+.+.-+|++...+........+.    
T Consensus       214 s~i~~t~~~------------e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~  281 (559)
T KOG1334|consen  214 SEILETGYV------------ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKER  281 (559)
T ss_pred             eeeccccce------------ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccc
Confidence            776543211            1144456788999999999965 55888999999999999877544433332222    


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc------ccc-cccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS------QLD-CLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~------~~~-~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      .....++..|.... .+++++.|..+++||.+.-.......      ... .......|++++++.++.-|.++-.|-.|
T Consensus       282 v~L~~Ia~~P~nt~-~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~I  360 (559)
T KOG1334|consen  282 VGLYTIAVDPRNTN-EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDI  360 (559)
T ss_pred             eeeeeEecCCCCcc-ccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccce
Confidence            24567888887766 78999999999999987543221111      100 01234569999999888777777788889


Q ss_pred             EEeeCCCCCc-----------ceeecccCCC--CceeEEE-ECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceE
Q psy17188        420 SIWDLASPTP-----------RIKAELTSSA--PACYALA-ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  485 (504)
Q Consensus       420 ~iwd~~~~~~-----------~~~~~~~~~~--~~v~~l~-~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  485 (504)
                      +++.-..+..           ......++|.  ..|..+- |-|...|+++|+.-|.|.||+-++++.+.-+.+-..-|+
T Consensus       361 YLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVN  440 (559)
T KOG1334|consen  361 YLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVN  440 (559)
T ss_pred             EEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEe
Confidence            9996433221           1111133443  3455554 578899999999999999999999999998888667899


Q ss_pred             EEEEccCCCEEEEecCCC
Q psy17188        486 CIDISADGTKLWTGGLDN  503 (504)
Q Consensus       486 ~~~~s~d~~~l~s~s~Dg  503 (504)
                      ||.=+|--..||++|-|.
T Consensus       441 CLEpHP~~PvLAsSGid~  458 (559)
T KOG1334|consen  441 CLEPHPHLPVLASSGIDH  458 (559)
T ss_pred             ccCCCCCCchhhccCCcc
Confidence            999999999999998774

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.77  E-value=1e-15  Score=139.91  Aligned_cols=312  Identities=14%  Similarity=0.155  Sum_probs=187.2

Q ss_pred             EEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188        175 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       175 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~  254 (504)
                      ++-..++.|.+.|..+.+.  ...+......-..+.|+||++++++++.||.|.++|+.+++.+.+++. .....+++++
T Consensus        10 V~~~~~~~v~viD~~t~~~--~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s   86 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKV--VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVS   86 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SE--EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE-
T ss_pred             EEecCCCEEEEEECCCCeE--EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEEEc
Confidence            4456789999999987653  444544333334578999999999999999999999999999999984 4457889999


Q ss_pred             cCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q psy17188        255 ADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLA  332 (504)
Q Consensus       255 ~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~  332 (504)
                      +||++++++. .++.+.++|.++.+.... +...       ..........+..+..+|....+++. -+.+.|.+.|..
T Consensus        87 ~DG~~~~v~n~~~~~v~v~D~~tle~v~~-I~~~-------~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~  158 (369)
T PF02239_consen   87 PDGKYVYVANYEPGTVSVIDAETLEPVKT-IPTG-------GMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS  158 (369)
T ss_dssp             -TTTEEEEEEEETTEEEEEETTT--EEEE-EE---------EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred             CCCCEEEEEecCCCceeEeccccccceee-cccc-------cccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence            9999988765 689999999998764211 1000       00000134567788888888855555 445888888887


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE-------EE--
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV-------KL--  403 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~-------~~--  403 (504)
                      ..+......+ ..........|+|++++ ++++....+.+.++|..+......+.. ....|......+       .|  
T Consensus       159 d~~~~~~~~i-~~g~~~~D~~~dpdgry-~~va~~~sn~i~viD~~~~k~v~~i~~-g~~p~~~~~~~~php~~g~vw~~  235 (369)
T PF02239_consen  159 DPKNLKVTTI-KVGRFPHDGGFDPDGRY-FLVAANGSNKIAVIDTKTGKLVALIDT-GKKPHPGPGANFPHPGFGPVWAT  235 (369)
T ss_dssp             TSSCEEEEEE-E--TTEEEEEE-TTSSE-EEEEEGGGTEEEEEETTTTEEEEEEE--SSSBEETTEEEEEETTTEEEEEE
T ss_pred             cccccceeee-cccccccccccCcccce-eeecccccceeEEEeeccceEEEEeec-cccccccccccccCCCcceEEee
Confidence            7643333333 23446778999999985 445556677899999876433221111 111222222222       12  


Q ss_pred             cCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe----eCCCcEEEEEcCCcceEEEEee
Q psy17188        404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC----CSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       404 s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      ...+...++.-....+.+||..+.+........+..   .-+..+|++++|.+.    ...+.|.++|.++.+.+..+..
T Consensus       236 ~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g---lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~  312 (369)
T PF02239_consen  236 SGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG---LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITP  312 (369)
T ss_dssp             EBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS-----EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHH
T ss_pred             ccccceecccccCCccccchhhcCeEEEEEECCCCc---ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEec
Confidence            112233322223345667888877766666554433   455889999999988    4458999999999988877763


Q ss_pred             cC-CceEEEEEccCCCEEEEecCCC
Q psy17188        480 HT-DGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       480 h~-~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .. ..+..+.|++||+++..+..|+
T Consensus       313 ~~~~~~~h~ef~~dG~~v~vS~~~~  337 (369)
T PF02239_consen  313 GPGKRVVHMEFNPDGKEVWVSVWDG  337 (369)
T ss_dssp             HHT--EEEEEE-TTSSEEEEEEE--
T ss_pred             cCCCcEeccEECCCCCEEEEEEecC
Confidence            32 2589999999999988876653

...

>KOG2139|consensus

Probab=99.76  E-value=1.2e-15  Score=129.17  Aligned_cols=257  Identities=14%  Similarity=0.079  Sum_probs=167.1

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee--cCCCcEEEEEEcC-CCcEEEEecCCeEEEEeCCCCCCC-
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISN-PTKYVYTGGKGCVKVWDISQPGSK-  147 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~s~-~~~~l~~~~d~~i~vw~~~~~~~~-  147 (504)
                      -.+.-++|.+.-.-.+++.-++.+.+++...  .....+  .....|+|++|-| .+.-|+.++.+.|.+|..+..... 
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~kss--t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~  176 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS--TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN  176 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCC--CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence            3466688877656667777888888887655  333444  3467899999999 456888888999999987643211 


Q ss_pred             --------CceeeeeecCCCCceEEEEEccCCCEEEEecC-CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE
Q psy17188        148 --------TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC  218 (504)
Q Consensus       148 --------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  218 (504)
                              ...+.+...+| .+|++++|.+||..|++++. |..|.|||.+++......  ....+.++-+.||||+.+|
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPdgd~l  253 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPDGDVL  253 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCCCCEE
Confidence                    11222333344 78999999999999999874 677999999988764443  2334558889999999999


Q ss_pred             EEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEccCCCEEEE-EcCCCeEEEEECCCCceEEEeecCCCCC---CCc
Q psy17188        219 FSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWT-GGLDNTVRSWDLREGCVKVWDISQPGSK---TPV  293 (504)
Q Consensus       219 ~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~i~~wd~~~~~~~~~~~~~~~~~---~~~  293 (504)
                      +++.-|+..++|+.... ...+-.- ..+.|...+|+|+|+.|+. .+..-.++-...................   ...
T Consensus       254 faAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL  332 (445)
T KOG2139|consen  254 FAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADL  332 (445)
T ss_pred             EEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccc
Confidence            99999999999965443 3333333 4558999999999987654 4433333322222111000000000000   000


Q ss_pred             cccee----cccCCceEEEEEcCCCCEEEEEeCCCc--------EEEEeCCCC
Q psy17188        294 SQLDC----LQRDNYIRSVKLLPDGRTLIVGGEASN--------LSIWDLASP  334 (504)
Q Consensus       294 ~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~--------i~v~d~~~~  334 (504)
                      .....    ..-.+++.+++|+|.|++|++....+.        |.+||.+..
T Consensus       333 ~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~s  385 (445)
T KOG2139|consen  333 QEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKS  385 (445)
T ss_pred             hhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhccccc
Confidence            01111    112567899999999999999865543        666776543

>KOG2111|consensus

Probab=99.75  E-value=1.4e-14  Score=120.69  Aligned_cols=243  Identities=12%  Similarity=0.176  Sum_probs=167.3

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEE-EeCC------CcEEEEECC
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-CCSD------GNIAVWDLH  233 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d------g~i~iwd~~  233 (504)
                      ...+++|+.|...+++|.++| .+||+.+.-+...........-.+..+-|-  .++|+. |+.+      ..|.|||=.
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~   83 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDL   83 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEecc
Confidence            345699999999999987654 899998753322222222222223334443  234443 3332      469999977


Q ss_pred             CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      ..+++.++. ...+|.++.+.++  +|++.- ++.|++|...+.--.+.            .+..........+++-..+
T Consensus        84 k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~------------~~et~~NPkGlC~~~~~~~  147 (346)
T KOG2111|consen   84 KERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLH------------VIETRSNPKGLCSLCPTSN  147 (346)
T ss_pred             cCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhhee------------eeecccCCCceEeecCCCC
Confidence            778888887 7889999999876  455543 67899999875421111            1222222222333333334


Q ss_pred             CCEEEE-EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe-EEEEecCCCCCCCccccccc
Q psy17188        314 GRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC-VKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       314 ~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-i~i~d~~~~~~~~~~~~~~~  391 (504)
                      ...|+. |-.-|.|++-|+...+......+..|...|.+++++.+|.  ++++++..|+ |||||..++.....   +..
T Consensus       148 k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt--~vATaStkGTLIRIFdt~~g~~l~E---~RR  222 (346)
T KOG2111|consen  148 KSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGT--LVATASTKGTLIRIFDTEDGTLLQE---LRR  222 (346)
T ss_pred             ceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCcc--EEEEeccCcEEEEEEEcCCCcEeee---eec
Confidence            444544 4456899999998876656788899999999999999999  8999999987 89999988755443   333


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      -.....|.+++|||+..+|+++++.|+++||.++..
T Consensus       223 G~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  223 GVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT  258 (346)
T ss_pred             CCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence            345667999999999999999999999999998753

>KOG1310|consensus

Probab=99.74  E-value=9e-17  Score=143.01  Aligned_cols=178  Identities=17%  Similarity=0.270  Sum_probs=138.9

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCeEEEEEcc--CCCEEEEEcCCCeEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISA--DGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~w  272 (504)
                      ..++.+|.+.|.|+.|+.+|.+|++|+.|-.+.|||.-..+++..+ .+|...|.++.|-|  +.+.+++|..|..|+++
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf  122 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF  122 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence            5678999999999999999999999999999999999888887776 57999999999999  56689999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccc--------eeeec
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRI--------KAELT  343 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~--------~~~~~  343 (504)
                      |+...+-.-.+     ...........-|...|..++..|++ +.+.++++||+|+-||++....-.        .....
T Consensus       123 dl~~~~~~~~d-----~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~  197 (758)
T KOG1310|consen  123 DLDSSKEGGMD-----HGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN  197 (758)
T ss_pred             ecccccccccc-----cCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence            99853211000     00111133345577889999999988 889999999999999998743111        11112


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ..--...++.++|.... +++.|+.+-..++||.+.
T Consensus       198 ~~lielk~ltisp~rp~-~laVGgsdpfarLYD~Rr  232 (758)
T KOG1310|consen  198 PQLIELKCLTISPSRPY-YLAVGGSDPFARLYDRRR  232 (758)
T ss_pred             hhhheeeeeeecCCCCc-eEEecCCCchhhhhhhhh
Confidence            22235678899998887 899999999999999643

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.74  E-value=9.1e-14  Score=127.72  Aligned_cols=310  Identities=20%  Similarity=0.330  Sum_probs=193.4

Q ss_pred             EEEecCC----CcEEEEeCCCCCc--cceeeeecCcCceEEEEECCCCCEEEEEeC----CCcEEEEECCCC--e--EEE
Q psy17188        174 LIVGGEA----SNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQ--T--LVR  239 (504)
Q Consensus       174 l~~~~~d----g~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~--~--~~~  239 (504)
                      +++|+..    +.|.+|+++....  ...... ........++++|++++|++..+    ++.|..|++...  +  .+.
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~-~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~   80 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTV-AEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN   80 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEE-EESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeee-cCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence            4455544    6899998843332  222222 23344567899999999999877    468999888764  3  333


Q ss_pred             eecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCC-CceEEEe--ecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        240 QFQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLRE-GCVKVWD--ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      ...........++++|++++|+++.. +|.+.++++.. +.+....  ....+.    ......+......++.++|+++
T Consensus        81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~----g~~~~rq~~~h~H~v~~~pdg~  156 (345)
T PF10282_consen   81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGS----GPNPDRQEGPHPHQVVFSPDGR  156 (345)
T ss_dssp             EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEE----ESSTTTTSSTCEEEEEE-TTSS
T ss_pred             eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCC----CCcccccccccceeEEECCCCC
Confidence            34334455678999999999888864 88999999987 4432210  000000    0000123345678999999999


Q ss_pred             EEEEEeC-CCcEEEEeCCCCCccc--eeee-ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC-CCCcccccc
Q psy17188        316 TLIVGGE-ASNLSIWDLASPTPRI--KAEL-TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG-SKTPVSQLD  390 (504)
Q Consensus       316 ~l~~~~~-dg~i~v~d~~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~-~~~~~~~~~  390 (504)
                      ++++... ...|.+|++.......  ...+ .......+.+.|+|+++. +++....++.|.++++.... .........
T Consensus       157 ~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~-~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~  235 (345)
T PF10282_consen  157 FVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKY-AYVVNELSNTVSVFDYDPSDGSLTEIQTIS  235 (345)
T ss_dssp             EEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSE-EEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred             EEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCE-EEEecCCCCcEEEEeecccCCceeEEEEee
Confidence            9888643 3479999997765222  1122 234456789999999987 66677889999999988322 111111111


Q ss_pred             cc----cCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCEEEEeeC-CCc
Q psy17188        391 CL----QRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGN  462 (504)
Q Consensus       391 ~~----~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~  462 (504)
                      ..    ........++++|||++|+++.. .+.|.+|+++  +++................++++|+|++|+++.. ++.
T Consensus       236 ~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~  315 (345)
T PF10282_consen  236 TLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNT  315 (345)
T ss_dssp             SCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTE
T ss_pred             eccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCe
Confidence            11    12235779999999999888764 5679999984  3444444444433444788999999999998874 678


Q ss_pred             EEEEEc--CCcceEEEEe-ecCCceEEEEE
Q psy17188        463 IAVWDL--HNQTLVRQFQ-GHTDGASCIDI  489 (504)
Q Consensus       463 i~iwd~--~~~~~~~~~~-~h~~~v~~~~~  489 (504)
                      |.+|++  ++|++...-. ..-....||.|
T Consensus       316 v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  316 VSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             EEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            999976  5666544332 23345677766

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2394|consensus

Probab=99.73  E-value=5.5e-16  Score=137.74  Aligned_cols=174  Identities=21%  Similarity=0.292  Sum_probs=131.8

Q ss_pred             CCC-cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCC--------
Q psy17188        123 NPT-KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPT--------  192 (504)
Q Consensus       123 ~~~-~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~--------  192 (504)
                      +++ .+|+.-+-|.|.+.|.... ....+......-.+..|+|+.|-|. ...++++-.+|.+++||..-..        
T Consensus       183 ~~g~dllIGf~tGqvq~idp~~~-~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~  261 (636)
T KOG2394|consen  183 PKGLDLLIGFTTGQVQLIDPINF-EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQ  261 (636)
T ss_pred             CCCcceEEeeccCceEEecchhh-HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccc
Confidence            344 3444445788888886552 1122222222235688999999994 4455666688999999753110        


Q ss_pred             ------------------ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188        193 ------------------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       193 ------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~  254 (504)
                                        ......+.--...|...+|+|||++||+.+.||.++|+|..+.+++..++.--+...|++|+
T Consensus       262 ~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS  341 (636)
T KOG2394|consen  262 ALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS  341 (636)
T ss_pred             ccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence                              00111222234468889999999999999999999999999999998888888999999999


Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                      |||++|++|++|-.|.||.+...++               .....+|...|..++|+|
T Consensus       342 PDGKyIvtGGEDDLVtVwSf~erRV---------------VARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  342 PDGKYIVTGGEDDLVTVWSFEERRV---------------VARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             CCccEEEecCCcceEEEEEeccceE---------------EEeccccccceeeEeecc
Confidence            9999999999999999999999886               556678999999999998

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.73  E-value=5.7e-15  Score=130.67  Aligned_cols=344  Identities=17%  Similarity=0.211  Sum_probs=227.5

Q ss_pred             CCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC------------
Q psy17188        112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------------  179 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------------  179 (504)
                      -..++..+.+||.|++|++..-..|.+|.-....   .+..+   . ...|..+.|+|+++||.+-+.            
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~---~l~~~---~-~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp  103 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKA---KLVRF---R-HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISP  103 (561)
T ss_pred             cCcchhheeecCcchheehhhccceEEccccchh---heeee---e-cCCceecccCcccceeeeeccCCccChhhccCC
Confidence            4568899999999999999998889999876543   22221   2 356899999999999998543            


Q ss_pred             ---CCcEEEEeCCCCCccceeeeecCcCc--eE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEE-EeecC-CCCCeEEE
Q psy17188        180 ---ASNLSIWDLASPTPRIKAELTSSAPA--CY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-RQFQG-HTDGASCI  251 (504)
Q Consensus       180 ---dg~i~iw~~~~~~~~~~~~~~~~~~~--v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~-h~~~v~~~  251 (504)
                         +..+.+||+.++..  ...+.....+  .+ -+.|+.+.++++-. ....+.|+++ ++... ..+.. ....|...
T Consensus       104 ~~~~n~~~vwd~~sg~i--v~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dF  179 (561)
T COG5354         104 FTSKNNVFVWDIASGMI--VFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDF  179 (561)
T ss_pred             ccccCceeEEeccCcee--EeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeE
Confidence               33599999997764  3333332222  33 57888888877655 3457999997 33221 11111 13567888


Q ss_pred             EEccCCC--EEEE-----EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe---
Q psy17188        252 DISADGT--KLWT-----GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG---  321 (504)
Q Consensus       252 ~~~~~~~--~l~s-----~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---  321 (504)
                      .|+|.++  .|+.     .+.++++++|.+..+....             .....  ...-..+.|.+.|++|++-.   
T Consensus       180 sisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~-------------tk~lf--k~~~~qLkW~~~g~~ll~l~~t~  244 (561)
T COG5354         180 SISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLV-------------TKNLF--KVSGVQLKWQVLGKYLLVLVMTH  244 (561)
T ss_pred             EecCCCCCceEEEEccccCCCCcEEEEEEccCCCeee-------------eeeeE--eecccEEEEecCCceEEEEEEEe
Confidence            8998643  3442     3556778888777554321             11111  11234678889898876531   


Q ss_pred             --------CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccccc
Q psy17188        322 --------EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ  393 (504)
Q Consensus       322 --------~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~  393 (504)
                              ....+++++++......  .. ...++|...+|.|.++...+++|..+..+.++|++..-        ....
T Consensus       245 ~ksnKsyfgesnLyl~~~~e~~i~V--~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl--------~~~~  313 (561)
T COG5354         245 TKSNKSYFGESNLYLLRITERSIPV--EK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNL--------RFYF  313 (561)
T ss_pred             eecccceeccceEEEEeecccccce--ec-cccccceeeeecccCCceeEEecccccceeecccccce--------EEec
Confidence                    12457888887443222  11 44669999999999998888888999999999988641        1111


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC------CCcEE
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS------DGNIA  464 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~------dg~i~  464 (504)
                      .+..-+.+.|+|.++++++++-+   |.|.+||..... .....+.+.  ...-+.|+||++++.+...      |..|.
T Consensus       314 Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf-~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~  390 (561)
T COG5354         314 PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF-KVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIK  390 (561)
T ss_pred             CCcccccccccCcccEEEEecCCccccceEEeccCCce-EEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceE
Confidence            22333478899999999986654   679999987543 333233332  2345689999999887643      67899


Q ss_pred             EEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        465 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       465 iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      |||+...+..        ..+.+.|.|.+++.-+.|.+.
T Consensus       391 l~~v~g~~~f--------el~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         391 LWDVYGAKVF--------ELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             EEEecCchhh--------hhhhccccCCcccceeeccCC
Confidence            9998654432        456778888888777766553

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.73  E-value=1.1e-15  Score=145.15  Aligned_cols=235  Identities=17%  Similarity=0.186  Sum_probs=154.2

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      ..|.+||..... .+.+..+...+.+..|+|||+.|+..+.+   ..|++||+.+++....                ...
T Consensus       184 ~~l~i~D~~g~~-~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l----------------~~~  246 (433)
T PRK04922        184 YALQVADSDGYN-PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV----------------ASF  246 (433)
T ss_pred             EEEEEECCCCCC-ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe----------------ccC
Confidence            358999986443 44555577789999999999999887643   4699999988764311                112


Q ss_pred             CCceEEEEEcCCCCEEEE-EeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe--EEEEe
Q psy17188        302 DNYIRSVKLLPDGRTLIV-GGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC--VKVWD  376 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~-~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--i~i~d  376 (504)
                      ........|+|+|+.|+. .+.+|  .|++||+.+++.   ..+..+.......+|+||++.+++ +...++.  +.+++
T Consensus       247 ~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~---~~lt~~~~~~~~~~~spDG~~l~f-~sd~~g~~~iy~~d  322 (433)
T PRK04922        247 RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL---TRLTNHFGIDTEPTWAPDGKSIYF-TSDRGGRPQIYRVA  322 (433)
T ss_pred             CCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe---EECccCCCCccceEECCCCCEEEE-EECCCCCceEEEEE
Confidence            233457899999998764 45555  599999987643   233334445567899999986333 3333444  55555


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      +..+...    .+.  .........+|+|||++|+..+.++   .|.+||+.+++......  .  .......|+|||++
T Consensus       323 l~~g~~~----~lt--~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~--~--~~~~~p~~spdG~~  392 (433)
T PRK04922        323 ASGGSAE----RLT--FQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTP--G--SLDESPSFAPNGSM  392 (433)
T ss_pred             CCCCCeE----Eee--cCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCC--C--CCCCCceECCCCCE
Confidence            5443211    111  1123344789999999998765443   59999998776442221  1  12345699999999


Q ss_pred             EEEeeCC---CcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        454 CFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       454 l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      |+..+.+   +.|+++++. +.....+..+.+.+...+|+|
T Consensus       393 i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        393 VLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             EEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence            8877653   457888885 445566666667788888887

>KOG1272|consensus

Probab=99.73  E-value=6.3e-17  Score=141.06  Aligned_cols=276  Identities=15%  Similarity=0.187  Sum_probs=210.5

Q ss_pred             CcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188        114 EVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ..-+.+.++.+|+.++.++ .|.|..+|+.+......+      .-...|.++.|..+.+++|++- ...++|||-..-+
T Consensus       130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei------~v~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~GtE  202 (545)
T KOG1272|consen  130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI------NVMETVRDVTFLHNEQFFAVAQ-KKYVYVYDNNGTE  202 (545)
T ss_pred             cCCeeeeecCCccEEEecCCccceeeeecccceeeeee------ehhhhhhhhhhhcchHHHHhhh-hceEEEecCCCcE
Confidence            3446789999999999888 999999999886433322      2356789999999999999884 5789999965433


Q ss_pred             ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        193 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                         ...+..| ..|..+.|-|..-+|++++..|.++.-|+.+|+.+..+....+.+..++-+|-+..+-+|...|+|.+|
T Consensus       203 ---lHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlW  278 (545)
T KOG1272|consen  203 ---LHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLW  278 (545)
T ss_pred             ---Eeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEec
Confidence               3444444 348889999998899999999999999999999999999888999999999988899999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      .....+.               ......|.++|.++++.++|+++++.+.|..++|||++..........   ..+...+
T Consensus       279 SP~skeP---------------LvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t---p~~a~~l  340 (545)
T KOG1272|consen  279 SPNSKEP---------------LVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT---PHPASNL  340 (545)
T ss_pred             CCCCcch---------------HHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec---CCCcccc
Confidence            9887663               555677899999999999999999999999999999998753333222   3356677


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ++|..+    +++.+....+.||.-............-.......|..+.|.|-...|-+|...|.-.+.
T Consensus       341 s~Sqkg----lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsil  406 (545)
T KOG1272|consen  341 SLSQKG----LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSIL  406 (545)
T ss_pred             cccccc----ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEe
Confidence            777765    344456678999964333221111111222234588999999988788777666644443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=1.8e-15  Score=143.11  Aligned_cols=238  Identities=18%  Similarity=0.206  Sum_probs=155.1

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      ..|.++|.. +...+.+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++...                ....
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~----------------l~~~  238 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV----------------VANF  238 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE----------------eecC
Confidence            357777764 44444555677889999999999998877643   369999999886432                1122


Q ss_pred             CCceEEEEEcCCCCEEEE-EeCCCcEEEEe--CCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        302 DNYIRSVKLLPDGRTLIV-GGEASNLSIWD--LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      ........|+|||+.|+. .+.++...+|.  +..+.   ...+..+........|+||++.+++ +...++...+|.+.
T Consensus       239 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~l~f-~s~~~g~~~Iy~~~  314 (427)
T PRK02889        239 KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSPDGRSIYF-TSDRGGAPQIYRMP  314 (427)
T ss_pred             CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcCCCCEEEE-EecCCCCcEEEEEE
Confidence            334567899999998875 56777766665  44332   2233334445667889999996443 34445666777664


Q ss_pred             CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE
Q psy17188        379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF  455 (504)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~  455 (504)
                      ......  ..+.  .........+|+|||++|+..+.++   .|++||+.+++...... .   .......|+||+++|+
T Consensus       315 ~~~g~~--~~lt--~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~-~---~~~~~p~~spdg~~l~  386 (427)
T PRK02889        315 ASGGAA--QRVT--FTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTD-T---TRDESPSFAPNGRYIL  386 (427)
T ss_pred             CCCCce--EEEe--cCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccC-C---CCccCceECCCCCEEE
Confidence            322111  1111  1122334678999999999877654   59999998776443321 1   1234569999999998


Q ss_pred             EeeCCC---cEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        456 SCCSDG---NIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       456 s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      .++.++   .+++.++ +++....+..+.+.+...+|+|-
T Consensus       387 ~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        387 YATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             EEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCCC
Confidence            877544   3556666 46666677667778888899873

>KOG2321|consensus

Probab=99.72  E-value=1.7e-15  Score=135.78  Aligned_cols=299  Identities=15%  Similarity=0.204  Sum_probs=208.6

Q ss_pred             cccceeeecCCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCC--CCceEEEEEccCCCEEEEec
Q psy17188        103 HARQINTLSHGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQR--DNYIRSVKLLPDGRTLIVGG  178 (504)
Q Consensus       103 ~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~  178 (504)
                      ..+.++.++|...-+.|..+|||+|+.+.+  ...|++||+..-       .+.+..|  ...|.-.-++.|-..++.-.
T Consensus        41 rieLiQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL-------SLKFERhlDae~V~feiLsDD~SK~v~L~  113 (703)
T KOG2321|consen   41 RIELIQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL-------SLKFERHLDAEVVDFEILSDDYSKSVFLQ  113 (703)
T ss_pred             HHHHHHhcCCccccceeEecCCCcEEEEecccCCceEEEEcccc-------eeeeeecccccceeEEEeccchhhheEee
Confidence            446677889999999999999999987766  889999999763       1222122  34455555555655666666


Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      .|.+|.+-.......  ...++.   .-..++++.-.--|++++....|+-++++.|..+..+....+.++++..++...
T Consensus       114 ~DR~IefHak~G~hy--~~RIP~---~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hg  188 (703)
T KOG2321|consen  114 NDRTIEFHAKYGRHY--RTRIPK---FGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHG  188 (703)
T ss_pred             cCceeeehhhcCeee--eeecCc---CCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccc
Confidence            777776654322111  111111   124455554333355555566899999999999999998889999999999888


Q ss_pred             EEEEEcCCCeEEEEECCCCce-EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        259 KLWTGGLDNTVRSWDLREGCV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      +|++|+.||.|..||.+.... ...+....     +...........|+++.|+.+|-.+++|+.+|.+.+||++..++.
T Consensus       189 Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~-----v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl  263 (703)
T KOG2321|consen  189 LLACGTEDGVVEFWDPRDKSRVGTLDAASS-----VNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL  263 (703)
T ss_pred             eEEecccCceEEEecchhhhhheeeecccc-----cCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce
Confidence            999999999999999987642 12221111     001111223345999999999999999999999999999987654


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      .. .-+....+|..+.|.+.+....+++ .....++|||-.++.....+      .....++.+|+-|++.+++++..++
T Consensus       264 ~~-kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asi------Ept~~lND~C~~p~sGm~f~Ane~~  335 (703)
T KOG2321|consen  264 LV-KDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASI------EPTSDLNDFCFVPGSGMFFTANESS  335 (703)
T ss_pred             ee-cccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCceeec------cccCCcCceeeecCCceEEEecCCC
Confidence            33 3344455888999987755434444 45678999998876544433      2344588999999999999999998


Q ss_pred             cEEEeeCCC
Q psy17188        418 NLSIWDLAS  426 (504)
Q Consensus       418 ~i~iwd~~~  426 (504)
                      .+..|=+..
T Consensus       336 ~m~~yyiP~  344 (703)
T KOG2321|consen  336 KMHTYYIPS  344 (703)
T ss_pred             cceeEEccc
Confidence            888776654

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=1.6e-14  Score=137.46  Aligned_cols=233  Identities=15%  Similarity=0.148  Sum_probs=151.5

Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      ..|+++|.+...   ...+..+...+...+|+|||+.|+..+.   +..|++||+.+++.. .+..+.+.+....|+|||
T Consensus       182 ~~l~~~d~dg~~---~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG  257 (435)
T PRK05137        182 KRLAIMDQDGAN---VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDG  257 (435)
T ss_pred             eEEEEECCCCCC---cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCC
Confidence            478889886544   3446677778999999999998887763   467999999888653 344566677889999999


Q ss_pred             CEEE-EEcCCCe--EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CC--cEEEEeC
Q psy17188        258 TKLW-TGGLDNT--VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-AS--NLSIWDL  331 (504)
Q Consensus       258 ~~l~-s~~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~  331 (504)
                      +.|+ +.+.++.  |++||+.+++...                ...+........|+|||+.|+..+. +|  .|+++|+
T Consensus       258 ~~la~~~~~~g~~~Iy~~d~~~~~~~~----------------Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        258 RKVVMSLSQGGNTDIYTMDLRSGTTTR----------------LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA  321 (435)
T ss_pred             CEEEEEEecCCCceEEEEECCCCceEE----------------ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence            8775 5555554  7778888776421                1223334566899999998887653 33  3555554


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ..++..             .+.                                       .....+....|+|||++|+
T Consensus       322 ~g~~~~-------------~lt---------------------------------------~~~~~~~~~~~SpdG~~ia  349 (435)
T PRK05137        322 DGSNPR-------------RIS---------------------------------------FGGGRYSTPVWSPRGDLIA  349 (435)
T ss_pred             CCCCeE-------------Eee---------------------------------------cCCCcccCeEECCCCCEEE
Confidence            432110             000                                       0011233567888888887


Q ss_pred             EeeCC---CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC------CcEEEEEcCCcceEEEEeecCC
Q psy17188        412 VGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTD  482 (504)
Q Consensus       412 ~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~h~~  482 (504)
                      ....+   ..|.+||+.++... .....   ..+....|+|||++|+..+.+      ..++++|+..++. ..+. ..+
T Consensus       350 ~~~~~~~~~~i~~~d~~~~~~~-~lt~~---~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~  423 (435)
T PRK05137        350 FTKQGGGQFSIGVMKPDGSGER-ILTSG---FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPG  423 (435)
T ss_pred             EEEcCCCceEEEEEECCCCceE-eccCC---CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCC
Confidence            76543   25788887654432 22111   235567999999998865543      2578888876654 4444 344


Q ss_pred             ceEEEEEcc
Q psy17188        483 GASCIDISA  491 (504)
Q Consensus       483 ~v~~~~~s~  491 (504)
                      .+...+|+|
T Consensus       424 ~~~~p~Wsp  432 (435)
T PRK05137        424 DASDPAWSP  432 (435)
T ss_pred             CccCcccCC
Confidence            577788886

>KOG1240|consensus

Probab=99.71  E-value=4.5e-15  Score=144.40  Aligned_cols=270  Identities=15%  Similarity=0.204  Sum_probs=185.1

Q ss_pred             ccceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCC-------eEEEeecCCCCCeEEEEEccCCCEEEEEc
Q psy17188        193 PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQ-------TLVRQFQGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      ......+..|...+..++.+++. .++++|+.||+|++||++.-       +...++....+.+.++...+.+..+|.++
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence            34567788888889999988765 89999999999999998642       23334444567889999999999999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCC-EEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGR-TLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      .||.|++.+++...........      ............+..-++.. .+. .++.+...+.|..||+++.......+.
T Consensus      1118 ~DG~v~~~~id~~~~~~~~~~~------~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQ------VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred             CCCeEEEEEccccccccceeee------eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence            9999999998863221111000      00111111122233333333 233 688888899999999998877777777


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEee--CCC
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGG--EAS  417 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~~--~dg  417 (504)
                      ....+.|++++.+|.+.  +++.|...|.+.+||++-........    ..+..+|..+..+|-   ....++++  ..+
T Consensus      1192 ~~~hG~vTSi~idp~~~--WlviGts~G~l~lWDLRF~~~i~sw~----~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~n 1265 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCN--WLVIGTSRGQLVLWDLRFRVPILSWE----HPARAPIRHVWLCPTYPQESVSVSAGSSSNN 1265 (1431)
T ss_pred             CccccceeEEEecCCce--EEEEecCCceEEEEEeecCceeeccc----CcccCCcceEEeeccCCCCceEEEecccCCC
Confidence            77788999999999999  89999999999999998653332222    234466777777663   23444443  467


Q ss_pred             cEEEeeCCCCCcceeeccc-----------------CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        418 NLSIWDLASPTPRIKAELT-----------------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                      .|.+|++.++......-..                 .+........+..-+..+.+|+.|..|+.||....+..
T Consensus      1266 evs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1266 EVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred             ceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence            8999999887543332221                 11112223344455678899999999999998766544

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=4.1e-15  Score=140.49  Aligned_cols=216  Identities=17%  Similarity=0.157  Sum_probs=146.2

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCC--cE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS--NL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg--~i  183 (504)
                      .+.+.+.+.+|||||+.|+..+    +..|.+|++.+++. ..+.     ...+.+...+|+|||+.|+.. +.++  .|
T Consensus       196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-~~l~-----~~~~~~~~~~~SPDG~~La~~~~~~g~~~I  269 (429)
T PRK03629        196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVA-----SFPRHNGAPAFSPDGSKLAFALSKTGSLNL  269 (429)
T ss_pred             cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe-EEcc-----CCCCCcCCeEECCCCCEEEEEEcCCCCcEE
Confidence            5667899999999999888643    45799999977532 1111     223345578999999998865 3344  58


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-Cc--EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      ++||+++++.   ..+..+...+....|+|||+.|+..+.+ +.  |+++|+.+++.. .+..+........|+|||++|
T Consensus       270 ~~~d~~tg~~---~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~I  345 (429)
T PRK03629        270 YVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFM  345 (429)
T ss_pred             EEEECCCCCE---EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEE
Confidence            8999987653   2334444557889999999988777654 44  555577766543 333344456678999999998


Q ss_pred             EEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc---EEEEeCCCC
Q psy17188        261 WTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN---LSIWDLASP  334 (504)
Q Consensus       261 ~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---i~v~d~~~~  334 (504)
                      +..+.+   ..|.+||+.+++....              ..   ........|+|||+.|+..+.++.   +.++++...
T Consensus       346 a~~~~~~g~~~I~~~dl~~g~~~~L--------------t~---~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~  408 (429)
T PRK03629        346 VMVSSNGGQQHIAKQDLATGGVQVL--------------TD---TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGR  408 (429)
T ss_pred             EEEEccCCCceEEEEECCCCCeEEe--------------CC---CCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence            876543   3588899988865321              10   111235789999999999887764   666676443


Q ss_pred             CccceeeeccCCCceeeEEECC
Q psy17188        335 TPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       335 ~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                         ....+..+...+...+|+|
T Consensus       409 ---~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        409 ---FKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             ---CeEECccCCCCcCCcccCC
Confidence               2344455666777788876

>KOG2394|consensus

Probab=99.70  E-value=2.8e-15  Score=133.36  Aligned_cols=246  Identities=17%  Similarity=0.223  Sum_probs=154.0

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeE----EEeecCCCCCeEEEEE-----ccCCCEEEEEcCCCeEEEEECCCCc
Q psy17188        208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDI-----SADGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~-----~~~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      ...++-.|++|+..- ...+++|+.+.+..    +....-......|-+|     .+++--++.+-.-|.+.+.|....+
T Consensus       128 ~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~  206 (636)
T KOG2394|consen  128 NTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFE  206 (636)
T ss_pred             eccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchhhH
Confidence            333444555555442 23577887764321    1111111122233344     3455567778778888888876633


Q ss_pred             eEE-EeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        279 VKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                      +.. +            ..........++++.|-|. ...++++..+|.+++||........          -.+....+
T Consensus       207 ~sklf------------ne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t----------~p~~~~~k  264 (636)
T KOG2394|consen  207 VSKLF------------NEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT----------APSYQALK  264 (636)
T ss_pred             HHHhh------------hhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCC----------CCcccccC
Confidence            210 1            1111223477999999994 4567777889999999873221000          00011112


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      ++.  .+..       ..|.-..  ...++.  ........|..++|+|||++||+.+.||.++|||..+.+.+  ...+
T Consensus       265 ~~~--~f~i-------~t~ksk~--~rNPv~--~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLl--g~mk  329 (636)
T KOG2394|consen  265 DGD--QFAI-------LTSKSKK--TRNPVA--RWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELL--GVMK  329 (636)
T ss_pred             CCC--eeEE-------eeeeccc--cCCccc--eeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHH--HHHH
Confidence            222  1111       1111100  001111  11123447889999999999999999999999999865443  3344


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      ..-+...|++|||||+||++|++|--|.||.+..++++.+-++|++.|..++|.|
T Consensus       330 SYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  330 SYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             hhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            5566789999999999999999999999999999999999999999999999986

>KOG2315|consensus

Probab=99.70  E-value=7.9e-14  Score=125.12  Aligned_cols=332  Identities=14%  Similarity=0.195  Sum_probs=212.6

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEEC
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  212 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (504)
                      .-.+.+|+.-......+..  ...+.....+..+++++|+++|.+. +..++|++.......    +......++++.|+
T Consensus        10 Se~~~l~~~~~~~~~~~~f--~~~~~~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~----lt~~~~~~~~L~fS   82 (566)
T KOG2315|consen   10 SEGFYLFNGPGSKDAVTVF--EQNKTSRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVV----LCVELKKTYDLLFS   82 (566)
T ss_pred             cceeEEeccCCcccccccc--ccCCCCCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEE----EEeccceeeeeeec
Confidence            4457778764422222211  1111234477889999999888875 678999998876522    22222258999999


Q ss_pred             CCCCEEEEEe-----C-----CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        213 PDSKVCFSCC-----S-----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       213 ~~~~~l~~~~-----~-----dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      |-+.+|.+=-     .     .-.+.+|+++++.....+......-.++.|++|..+ +.--..+.+.+|++..-+    
T Consensus        83 P~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl-~arlv~nev~f~~~~~f~----  157 (566)
T KOG2315|consen   83 PKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESL-AARLVSNEVQFYDLGSFK----  157 (566)
T ss_pred             ccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhh-hhhhhcceEEEEecCCcc----
Confidence            9999887521     1     234789999997666555543333368899988753 332335679999987743    


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCC--CEEEE-----EeCCCcEEEEeCCCCCccce-eeeccCCCceeeEEE
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG--RTLIV-----GGEASNLSIWDLASPTPRIK-AELTSSAPACYALAI  354 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~-----~~~dg~i~v~d~~~~~~~~~-~~~~~~~~~i~~~~~  354 (504)
                                  .....-+...+..+.++|.+  ..+++     .+.-..+++|.......... ..-.-....-..+.|
T Consensus       158 ------------~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~W  225 (566)
T KOG2315|consen  158 ------------TIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKW  225 (566)
T ss_pred             ------------ceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEe
Confidence                        22333446678889999863  33433     23445799998763221111 111112224456778


Q ss_pred             CCCCCCceeeecc----------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE--eeCCCcEEEe
Q psy17188        355 SPDSKSPFFSSHH----------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV--GGEASNLSIW  422 (504)
Q Consensus       355 ~~~~~~~~~~~~~----------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~~dg~i~iw  422 (504)
                      .+-+..+++++.+          .+.++.+++++..  ...    -.....++|.++.|+|+++-+++  |-.--.+.||
T Consensus       226 N~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~--s~~----V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtif  299 (566)
T KOG2315|consen  226 NKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE--SVS----VPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIF  299 (566)
T ss_pred             ccCCceEEEEEEEeecCCCccccccceEEEEEecCc--eEE----EecCCCCCceEEEECCCCCEEEEEEecccceEEEE
Confidence            8777765544432          1345777776621  111    11245789999999999986655  5566789999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC---CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      |++.. +  +..+  ..++-+++-|+|.|++|+.++-   .|.|-|||+.+.+++..+..-  .-+-++|+|||++++|+
T Consensus       300 nlr~~-~--v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~--~tt~~eW~PdGe~flTA  372 (566)
T KOG2315|consen  300 NLRGK-P--VFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA--NTTVFEWSPDGEYFLTA  372 (566)
T ss_pred             cCCCC-E--eEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccC--CceEEEEcCCCcEEEEE
Confidence            98742 2  2222  2344567799999999998765   489999999999999888753  34568999999999998


Q ss_pred             cC
Q psy17188        500 GL  501 (504)
Q Consensus       500 s~  501 (504)
                      ..
T Consensus       373 TT  374 (566)
T KOG2315|consen  373 TT  374 (566)
T ss_pred             ec
Confidence            74

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=2.8e-14  Score=135.79  Aligned_cols=216  Identities=13%  Similarity=0.135  Sum_probs=146.5

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---CCcEEEEeCCCCCccceeeeecCcCceEEEE
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALA  210 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  210 (504)
                      ..|.+||.+... .   ..+.  .+...+.+.+|+|||+.|+..+.   +..|++||+.+++.   ..+..+...+...+
T Consensus       182 ~~l~~~d~dg~~-~---~~lt--~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~---~~l~~~~g~~~~~~  252 (435)
T PRK05137        182 KRLAIMDQDGAN-V---RYLT--DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR---ELVGNFPGMTFAPR  252 (435)
T ss_pred             eEEEEECCCCCC-c---EEEe--cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE---EEeecCCCcccCcE
Confidence            378888875432 1   2222  56778999999999999988753   46799999987764   33445555677899


Q ss_pred             ECCCCCEEE-EEeCCCc--EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CC--eEEEEECCCCceEEEee
Q psy17188        211 ISPDSKVCF-SCCSDGN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DN--TVRSWDLREGCVKVWDI  284 (504)
Q Consensus       211 ~s~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg--~i~~wd~~~~~~~~~~~  284 (504)
                      |+|||+.|+ +.+.++.  |++||+.+++. ..+..+........|+|||+.|+..+. +|  .|+++|+.+++.+.   
T Consensus       253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~---  328 (435)
T PRK05137        253 FSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR---  328 (435)
T ss_pred             ECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE---
Confidence            999998765 4555554  78889888765 445556666778999999998887663 33  68888887765431   


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP  361 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  361 (504)
                                 +  ......+....|+|+|+.|+....+   ..|.+||+......   .+.. ...+..+.|+||++.+
T Consensus       329 -----------l--t~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~---~lt~-~~~~~~p~~spDG~~i  391 (435)
T PRK05137        329 -----------I--SFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGER---ILTS-GFLVEGPTWAPNGRVI  391 (435)
T ss_pred             -----------e--ecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceE---eccC-CCCCCCCeECCCCCEE
Confidence                       1  1123345668899999999887643   35888887654322   1211 2256788999999965


Q ss_pred             eeeeccCC----CeEEEEecCC
Q psy17188        362 FFSSHHYK----SCVKVWDISQ  379 (504)
Q Consensus       362 ~~~~~~~~----~~i~i~d~~~  379 (504)
                      ++.+....    ..+.++|+..
T Consensus       392 ~~~~~~~~~~~~~~L~~~dl~g  413 (435)
T PRK05137        392 MFFRQTPGSGGAPKLYTVDLTG  413 (435)
T ss_pred             EEEEccCCCCCcceEEEEECCC
Confidence            55443222    3577777654

>KOG3881|consensus

Probab=99.69  E-value=1.5e-14  Score=123.84  Aligned_cols=275  Identities=17%  Similarity=0.261  Sum_probs=184.6

Q ss_pred             CCCCceEEEEEccCCC--EEEEecCCCcEEEEeCCCCCcccee----eeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        157 QRDNYIRSVKLLPDGR--TLIVGGEASNLSIWDLASPTPRIKA----ELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~--~l~~~~~dg~i~iw~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      .....|..++|.-+++  .|...+.+..+..+.+.........    ........|..++.. |+ .|++|-.+|.+.+|
T Consensus        53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~  130 (412)
T KOG3881|consen   53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSGNLQVR  130 (412)
T ss_pred             chhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CC-EEEEEecCCcEEEE
Confidence            3456678888876544  4444445666777776654432222    334455566666654 33 67888899999999


Q ss_pred             ECCCCe----EEEeecCCCCCeEEEEEccC-CCEEEEEcCC--CeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        231 DLHNQT----LVRQFQGHTDGASCIDISAD-GTKLWTGGLD--NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       231 d~~~~~----~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d--g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      ..+.+.    .+..+..+ .++..+.-++. ...+++|+..  ..+.+||+.+. .++|.........     ....-.-
T Consensus       131 ~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~-~qiw~aKNvpnD~-----L~LrVPv  203 (412)
T KOG3881|consen  131 HDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS-KQIWSAKNVPNDR-----LGLRVPV  203 (412)
T ss_pred             eccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccc-eeeeeccCCCCcc-----ccceeee
Confidence            988442    22333322 45566666664 4466679988  89999999988 6777654432211     1112233


Q ss_pred             ceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        304 YIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       304 ~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      .++++.|-+.  ...|++++.-+.+++||.+....           +|.++                             
T Consensus       204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR-----------PV~~f-----------------------------  243 (412)
T KOG3881|consen  204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR-----------PVAQF-----------------------------  243 (412)
T ss_pred             eeccceecCCCCCceEEEEecceeEEEecCcccCc-----------ceeEe-----------------------------
Confidence            4566677665  66677777777777777664321           11111                             


Q ss_pred             CCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  461 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg  461 (504)
                              .  ..+..++++...|+++++++|...+.+..||++.++. ....+.+-.+.++++..+|..++|++++-|.
T Consensus       244 --------d--~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl-~g~~~kg~tGsirsih~hp~~~~las~GLDR  312 (412)
T KOG3881|consen  244 --------D--FLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL-LGCGLKGITGSIRSIHCHPTHPVLASCGLDR  312 (412)
T ss_pred             --------c--cccCcceeeeecCCCcEEEEecccchhheecccCcee-eccccCCccCCcceEEEcCCCceEEeeccce
Confidence                    1  1245677999999999999999999999999997653 3444677788899999999999999999999


Q ss_pred             cEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        462 NIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       462 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      .+||+|+++.+++.... -...++++.+.++
T Consensus       313 yvRIhD~ktrkll~kvY-vKs~lt~il~~~~  342 (412)
T KOG3881|consen  313 YVRIHDIKTRKLLHKVY-VKSRLTFILLRDD  342 (412)
T ss_pred             eEEEeecccchhhhhhh-hhccccEEEecCC
Confidence            99999999977765543 2455777777654

>KOG1272|consensus

Probab=99.68  E-value=1.7e-16  Score=138.47  Aligned_cols=265  Identities=20%  Similarity=0.258  Sum_probs=201.6

Q ss_pred             cceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceee
Q psy17188         73 PAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQ  152 (504)
Q Consensus        73 ~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~  152 (504)
                      -.|.+.++.+|..+.++...+-+-..+. ...+....+.-.+.|..+.|-.+.+++|++....++|||-..       ..
T Consensus       131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw-~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~G-------tE  202 (545)
T KOG1272|consen  131 GPYHLDYTRNGRHLLLGGRKGHLAAFDW-VTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNG-------TE  202 (545)
T ss_pred             CCeeeeecCCccEEEecCCccceeeeec-ccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCC-------cE
Confidence            4688889999998888888776554332 334556666778899999999999999999999999999654       33


Q ss_pred             eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188        153 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       153 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~  232 (504)
                      +.|......|..+.|.|.--+|++++..|.+.--|+.+++.  ...+....+.+..++-+|-+..+-+|..+|+|.+|..
T Consensus       203 lHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl--Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP  280 (545)
T KOG1272|consen  203 LHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL--VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSP  280 (545)
T ss_pred             EeehhhcCchhhhcccchhheeeecccCCceEEEeechhhh--hHHHHccCCccchhhcCCccceEEEcCCCceEEecCC
Confidence            44445667899999999999999999999999999998774  4455556677888999998889999999999999999


Q ss_pred             CCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        233 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       233 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                      ...+.+..+..|.++|.++++.++|.+++|.+.|..++|||++.-.                .+...........+++|.
T Consensus       281 ~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~----------------ql~t~~tp~~a~~ls~Sq  344 (545)
T KOG1272|consen  281 NSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY----------------QLHTYRTPHPASNLSLSQ  344 (545)
T ss_pred             CCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccc----------------ccceeecCCCcccccccc
Confidence            9999998888999999999999999999999999999999999754                222222244566778876


Q ss_pred             CCCEEEEEeCCCcEEEEeC-CCC--CccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        313 DGRTLIVGGEASNLSIWDL-ASP--TPRIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~-~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                      .|  +++.+....+.+|.- -.+  ......-...-...|..+.|+|-..  ++-.|.
T Consensus       345 kg--lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~ED--vLGIGH  398 (545)
T KOG1272|consen  345 KG--LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYED--VLGIGH  398 (545)
T ss_pred             cc--ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHH--eeeccc
Confidence            65  344445567999942 221  1111111222234788888888765  444443

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.68  E-value=7.6e-13  Score=121.64  Aligned_cols=275  Identities=20%  Similarity=0.344  Sum_probs=177.3

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----CCcEEEEeCCCC--CccceeeeecCcCceE
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASP--TPRIKAELTSSAPACY  207 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~~~~--~~~~~~~~~~~~~~v~  207 (504)
                      +.|.+|+++...  ..+..............++++|++++|.+...    ++.|..|++...  +...............
T Consensus        13 ~gI~~~~~d~~~--g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~   90 (345)
T PF10282_consen   13 GGIYVFRFDEET--GTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPC   90 (345)
T ss_dssp             TEEEEEEEETTT--TEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEE
T ss_pred             CcEEEEEEcCCC--CCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcE
Confidence            789999884321  22222222234455677899999999999866    568999998764  3333333333344456


Q ss_pred             EEEECCCCCEEEEEe-CCCcEEEEECCC-CeEEEe---ec----------CCCCCeEEEEEccCCCEEEEEcC-CCeEEE
Q psy17188        208 ALAISPDSKVCFSCC-SDGNIAVWDLHN-QTLVRQ---FQ----------GHTDGASCIDISADGTKLWTGGL-DNTVRS  271 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~---~~----------~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~  271 (504)
                      .++++|++++|+++. .+|.|.++++.. +.....   +.          .......++.++|+++++++... ...|.+
T Consensus        91 ~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~  170 (345)
T PF10282_consen   91 HIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYV  170 (345)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred             EEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEE
Confidence            799999999888886 489999999987 433222   21          12356789999999998877643 347888


Q ss_pred             EECCCCc--eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCC--CCCccceeeecc--
Q psy17188        272 WDLREGC--VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLA--SPTPRIKAELTS--  344 (504)
Q Consensus       272 wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~~~~~~~~--  344 (504)
                      |+++...  +...            ...........+.+.|+|+++++++..+ ++.|.++++.  .+..........  
T Consensus       171 ~~~~~~~~~l~~~------------~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~  238 (345)
T PF10282_consen  171 YDIDDDTGKLTPV------------DSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLP  238 (345)
T ss_dssp             EEE-TTS-TEEEE------------EEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCE
T ss_pred             EEEeCCCceEEEe------------eccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecc
Confidence            8887654  3210            1112344566899999999998877654 6779999887  332222222221  


Q ss_pred             ----CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC-CCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCc
Q psy17188        345 ----SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASN  418 (504)
Q Consensus       345 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~  418 (504)
                          .......++++||++. ++++....+.|.+|+++.. +....+....  ......+.++++|+|++|++++. ++.
T Consensus       239 ~~~~~~~~~~~i~ispdg~~-lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~--~~G~~Pr~~~~s~~g~~l~Va~~~s~~  315 (345)
T PF10282_consen  239 EGFTGENAPAEIAISPDGRF-LYVSNRGSNSISVFDLDPATGTLTLVQTVP--TGGKFPRHFAFSPDGRYLYVANQDSNT  315 (345)
T ss_dssp             TTSCSSSSEEEEEE-TTSSE-EEEEECTTTEEEEEEECTTTTTEEEEEEEE--ESSSSEEEEEE-TTSSEEEEEETTTTE
T ss_pred             ccccccCCceeEEEecCCCE-EEEEeccCCEEEEEEEecCCCceEEEEEEe--CCCCCccEEEEeCCCCEEEEEecCCCe
Confidence                1125778999999996 6667777899999999542 2222222222  12445789999999999998874 567


Q ss_pred             EEEeeCC
Q psy17188        419 LSIWDLA  425 (504)
Q Consensus       419 i~iwd~~  425 (504)
                      |.+|+++
T Consensus       316 v~vf~~d  322 (345)
T PF10282_consen  316 VSVFDID  322 (345)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            9998774

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.6e-12  Score=111.23  Aligned_cols=285  Identities=18%  Similarity=0.300  Sum_probs=189.0

Q ss_pred             EEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---CCcEEEEeCCC--CCccceee
Q psy17188        127 YVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLAS--PTPRIKAE  198 (504)
Q Consensus       127 ~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~--~~~~~~~~  198 (504)
                      ++.+..   +.-|.+|++++...  .+.......+.+..+-++|+|++++|.++..   +|.|..|.++.  ++....-.
T Consensus         6 YiGtyT~~~s~gI~v~~ld~~~g--~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~   83 (346)
T COG2706           6 YIGTYTKRESQGIYVFNLDTKTG--ELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNR   83 (346)
T ss_pred             EEeeecccCCCceEEEEEeCccc--ccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeec
Confidence            344444   67899999985422  2233333356788999999999999998854   57788888775  33222222


Q ss_pred             eecCcCceEEEEECCCCCEEEEEeC-CCcEEEEECCC-CeE---EEeecCCCCC----------eEEEEEccCCCEEEEE
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHN-QTL---VRQFQGHTDG----------ASCIDISADGTKLWTG  263 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~-~~~---~~~~~~h~~~----------v~~~~~~~~~~~l~s~  263 (504)
                      ......+-+.+++++++++|+++.. .|.|.++-+++ |.+   +..+. |.+.          +....+.|++++|++.
T Consensus        84 ~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~  162 (346)
T COG2706          84 QTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPHERQESPHVHSANFTPDGRYLVVP  162 (346)
T ss_pred             cccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCCccccCCccceeeeCCCCCEEEEe
Confidence            2222233378999999999888864 57899999865 432   22222 5544          8889999999998887


Q ss_pred             cCC-CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCC--ccce
Q psy17188        264 GLD-NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPT--PRIK  339 (504)
Q Consensus       264 ~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~--~~~~  339 (504)
                      ... -.|.+|++..|.+....           .. ........+.|.|+|++++..+.++ +++|.+|..+...  ....
T Consensus       163 DLG~Dri~~y~~~dg~L~~~~-----------~~-~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~l  230 (346)
T COG2706         163 DLGTDRIFLYDLDDGKLTPAD-----------PA-EVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEEL  230 (346)
T ss_pred             ecCCceEEEEEcccCcccccc-----------cc-ccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEe
Confidence            532 36889999887753221           11 1245566789999999999887665 7889999987742  1111


Q ss_pred             eeec------cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe
Q psy17188        340 AELT------SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  413 (504)
Q Consensus       340 ~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~  413 (504)
                      ..+.      ........+.+++||+. ++++-.....|.+|.+........+... ...+....+.+.++++|++|+++
T Consensus       231 Q~i~tlP~dF~g~~~~aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g~L~~~~~-~~teg~~PR~F~i~~~g~~Liaa  308 (346)
T COG2706         231 QTIDTLPEDFTGTNWAAAIHISPDGRF-LYASNRGHDSIAVFSVDPDGGKLELVGI-TPTEGQFPRDFNINPSGRFLIAA  308 (346)
T ss_pred             eeeccCccccCCCCceeEEEECCCCCE-EEEecCCCCeEEEEEEcCCCCEEEEEEE-eccCCcCCccceeCCCCCEEEEE
Confidence            1111      12346678999999996 4555555668888888765433222111 11233446789999999999998


Q ss_pred             eCCC-cEEEeeCCCCC
Q psy17188        414 GEAS-NLSIWDLASPT  428 (504)
Q Consensus       414 ~~dg-~i~iwd~~~~~  428 (504)
                      .+++ .|.+|.++...
T Consensus       309 ~q~sd~i~vf~~d~~T  324 (346)
T COG2706         309 NQKSDNITVFERDKET  324 (346)
T ss_pred             ccCCCcEEEEEEcCCC
Confidence            8765 48888776443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1e-14  Score=138.05  Aligned_cols=217  Identities=20%  Similarity=0.156  Sum_probs=140.1

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEE-ecCCCcEEE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSI  185 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i  185 (504)
                      .+.+.+.+.+|+|||+.|+..+    ...|.+||+.++..    ..+.  ...+.+.+.+|+|||+.|+. .+.++...|
T Consensus       193 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~----~~l~--~~~g~~~~~~~SPDG~~la~~~~~~g~~~I  266 (427)
T PRK02889        193 SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRR----RVVA--NFKGSNSAPAWSPDGRTLAVALSRDGNSQI  266 (427)
T ss_pred             cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCE----EEee--cCCCCccceEECCCCCEEEEEEccCCCceE
Confidence            6778899999999999888765    24699999987532    1111  23455678999999998875 566777666


Q ss_pred             EeC--CCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CCcEEEEE--CCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        186 WDL--ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWD--LHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       186 w~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      |.+  ..+.   ...+..+........|+|||+.|+..+. ++...+|.  +.+++... +..+........|+|||++|
T Consensus       267 y~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~I  342 (427)
T PRK02889        267 YTVNADGSG---LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLL  342 (427)
T ss_pred             EEEECCCCC---cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEE
Confidence            654  4333   2334445455667899999998876654 45666665  44444322 22223334567899999999


Q ss_pred             EEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---cEEEEeCCCC
Q psy17188        261 WTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASP  334 (504)
Q Consensus       261 ~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~v~d~~~~  334 (504)
                      +..+.++   .|.+||+.+++.+..              .   .........|+|||+.|+..+.++   .+.+.++.. 
T Consensus       343 a~~s~~~g~~~I~v~d~~~g~~~~l--------------t---~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g-  404 (427)
T PRK02889        343 AYISRVGGAFKLYVQDLATGQVTAL--------------T---DTTRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG-  404 (427)
T ss_pred             EEEEccCCcEEEEEEECCCCCeEEc--------------c---CCCCccCceECCCCCEEEEEEecCCCEEEEEEECCC-
Confidence            8776554   699999988864321              1   111235678999999988876544   255555532 


Q ss_pred             CccceeeeccCCCceeeEEECCC
Q psy17188        335 TPRIKAELTSSAPACYALAISPD  357 (504)
Q Consensus       335 ~~~~~~~~~~~~~~i~~~~~~~~  357 (504)
                        .....+..+.+.+...+|+|-
T Consensus       405 --~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        405 --RIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             --CceEEeecCCCCCCCCccCCC
Confidence              223333344455666677663

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.66  E-value=2.9e-14  Score=135.49  Aligned_cols=216  Identities=18%  Similarity=0.180  Sum_probs=143.1

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCC--cE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS--NL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg--~i  183 (504)
                      .|.+.+.+.+|+|||+.|+..+    +..|.+||+.++..    ..+.  ...+...+.+|+|||+.|+.. +.++  .|
T Consensus       201 ~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~----~~l~--~~~g~~~~~~~SpDG~~l~~~~s~~g~~~I  274 (433)
T PRK04922        201 RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR----ELVA--SFRGINGAPSFSPDGRRLALTLSRDGNPEI  274 (433)
T ss_pred             cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE----EEec--cCCCCccCceECCCCCEEEEEEeCCCCceE
Confidence            6778899999999999888765    34699999977532    1111  234445688999999988643 4444  59


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CCc--EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      ++||+.+++.   ..+..+.......+|+||++.|+..+. +|.  |+++|+.+++... +..+.......+|+|||+.|
T Consensus       275 y~~d~~~g~~---~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~I  350 (433)
T PRK04922        275 YVMDLGSRQL---TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKI  350 (433)
T ss_pred             EEEECCCCCe---EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEE
Confidence            9999987653   334445445567899999998887764 444  7777877765433 22233445578999999998


Q ss_pred             EEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---CcEEEEeCCCC
Q psy17188        261 WTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASP  334 (504)
Q Consensus       261 ~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~  334 (504)
                      +..+.++   .|.+||+.+++.+..                 .+........|+|||+.++..+.+   +.|.++++...
T Consensus       351 a~~~~~~~~~~I~v~d~~~g~~~~L-----------------t~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~  413 (433)
T PRK04922        351 AMVHGSGGQYRIAVMDLSTGSVRTL-----------------TPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR  413 (433)
T ss_pred             EEEECCCCceeEEEEECCCCCeEEC-----------------CCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            8765443   699999988764321                 111123456899999988877653   35777777543


Q ss_pred             CccceeeeccCCCceeeEEECC
Q psy17188        335 TPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       335 ~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                         ....+..+...+...+|+|
T Consensus       414 ---~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        414 ---VRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             ---ceEEcccCCCCCCCCccCC
Confidence               2233333344555666665

>KOG2321|consensus

Probab=99.65  E-value=7.7e-14  Score=125.35  Aligned_cols=277  Identities=15%  Similarity=0.151  Sum_probs=193.3

Q ss_pred             cCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCce
Q psy17188        201 SSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCV  279 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~  279 (504)
                      .+....+.|..+|||+|++ +|...-.|++||+.+-.+...-......|.-.-++.|-..++.-..|.+|.+....... 
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~h-  127 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRH-  127 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCee-
Confidence            4556678899999999655 56667789999998766544332223344444555565566666778877665432211 


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                      ..                 ..-...-..++++.-..-|++++....|+-++++.+  .....+....+.+.++.+++-..
T Consensus       128 y~-----------------~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqG--rfL~P~~~~~~~lN~v~in~~hg  188 (703)
T KOG2321|consen  128 YR-----------------TRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQG--RFLNPFETDSGELNVVSINEEHG  188 (703)
T ss_pred             ee-----------------eecCcCCccccccCCCccEEEeecCcceEEEEcccc--ccccccccccccceeeeecCccc
Confidence            10                 011122345666653434555555567888888877  45555555667899999998877


Q ss_pred             CceeeeccCCCeEEEEecCCCCCCCcccccc------cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        360 SPFFSSHHYKSCVKVWDISQPGSKTPVSQLD------CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       360 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~------~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                        ++++|+.+|.|..||.+.......+....      .......|+++.|+.+|-.+++|+.+|.+.|||+++.++....
T Consensus       189 --Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k  266 (703)
T KOG2321|consen  189 --LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK  266 (703)
T ss_pred             --eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec
Confidence              89999999999999988654332222111      1122334999999999999999999999999999988766544


Q ss_pred             cccCCCCceeEEEECCC--CCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188        434 ELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                       -+....+|..+.|.+.  ++.|++. ....++|||-.+|+....+.. ...++.+++-|++..+++|-++
T Consensus       267 -dh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~  334 (703)
T KOG2321|consen  267 -DHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANES  334 (703)
T ss_pred             -ccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCC
Confidence             3455667888999775  4556555 456799999999999988874 4559999999999999888665

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.65  E-value=1.3e-11  Score=125.35  Aligned_cols=373  Identities=13%  Similarity=0.097  Sum_probs=228.0

Q ss_pred             CCCcEEEEEEcCCCcEEEEe-cCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTG-GKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      ..+.|.++.+-++..-++.+ .+|.|.+...+.......+....  .-+..|.+++||||+..|+..+.++++.+.+-.-
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG--~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f  151 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVG--SVDSGILAASWSPDEELLALVTGEGNLLLMTRDF  151 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEE--EEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence            34678999999887655544 48999999332211122222222  3467899999999999999999888888765210


Q ss_pred             -------------C----------Cccc---------------e--------eeeecCcCceEEEEECCCCCEEEEEeC-
Q psy17188        191 -------------P----------TPRI---------------K--------AELTSSAPACYALAISPDSKVCFSCCS-  223 (504)
Q Consensus       191 -------------~----------~~~~---------------~--------~~~~~~~~~v~~~~~s~~~~~l~~~~~-  223 (504)
                                   +          +...               .        ..+. ....-..++|-.||.++|+.+- 
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~  230 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVE  230 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEE
Confidence                         0          0000               0        0111 2334567899999999998874 


Q ss_pred             --C---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        224 --D---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       224 --d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                        .   ..++||+- +|.+..+-..-.+--.+++|.|.|++|++.-.   ...|.+|.-+.-+...+            .
T Consensus       231 ~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF------------~  297 (928)
T PF04762_consen  231 PETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEF------------T  297 (928)
T ss_pred             cCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeE------------e
Confidence              2   46999994 47766555544444567899999999998764   34577776554332222            2


Q ss_pred             ceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC-CceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      +........|..+.|++++..|++...|. |++|-..+..+-...++.... ..+..+.|+|.... .+.....++.+..
T Consensus       298 l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~-~L~v~t~~g~~~~  375 (928)
T PF04762_consen  298 LRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPL-RLHVLTSNGQYEI  375 (928)
T ss_pred             cCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCC-EEEEEecCCcEEE
Confidence            22223456789999999999999987655 999999888766666665432 24455999998665 3333333344444


Q ss_pred             EecC----CCC---------------------------CCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        375 WDIS----QPG---------------------------SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       375 ~d~~----~~~---------------------------~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      +++.    ...                           ...+. ......-...|.+++|++++..+++-..||.|.+|.
T Consensus       376 ~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPM-s~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~  454 (928)
T PF04762_consen  376 YDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPM-SSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE  454 (928)
T ss_pred             EEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchH-hceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence            3321    110                           00011 011122457799999999998899999999999998


Q ss_pred             CCCCCcc------e--eec--------ccCCCCceeEEEECCCCCEEEEeeCC---CcEEEEEcCCcc---eEEEEeecC
Q psy17188        424 LASPTPR------I--KAE--------LTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQT---LVRQFQGHT  481 (504)
Q Consensus       424 ~~~~~~~------~--~~~--------~~~~~~~v~~l~~s~~~~~l~s~~~d---g~i~iwd~~~~~---~~~~~~~h~  481 (504)
                      .......      .  ...        .......+..++|..+...++....+   ..+.++++...+   .+.....-.
T Consensus       455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  534 (928)
T PF04762_consen  455 WDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVD  534 (928)
T ss_pred             ecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccC
Confidence            5443211      1  111        11223456788888888777766554   678888874332   222222233


Q ss_pred             CceEEEEEccCCCEEEEecCCC
Q psy17188        482 DGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       482 ~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +.+..+...++...++.-..||
T Consensus       535 ~~~~~~~~~~~~~~~~~q~~~G  556 (928)
T PF04762_consen  535 GVVLIISSSPDSGSLYIQTNDG  556 (928)
T ss_pred             ceEEEEeeCCCCcEEEEEECCC
Confidence            4444444444443233333333

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.64  E-value=2.3e-14  Score=119.00  Aligned_cols=159  Identities=16%  Similarity=0.267  Sum_probs=110.1

Q ss_pred             EEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEE
Q psy17188        306 RSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVW  375 (504)
Q Consensus       306 ~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~  375 (504)
                      ..+.|+++|++|++-..          -+...+|.++..............++|..++|+|+++..+++.+..+..+.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            46789999988876533          13455666544332222222223346999999999998667777788899999


Q ss_pred             ecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC---CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        376 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       376 d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                      |++.    ..+..    -....+..+.|+|+|++|++++.   .|.|.+||.++.+.+...  . + ..++.++|+|||+
T Consensus        89 d~~~----~~i~~----~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~--~-~-~~~t~~~WsPdGr  156 (194)
T PF08662_consen   89 DVKG----KKIFS----FGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTF--E-H-SDATDVEWSPDGR  156 (194)
T ss_pred             cCcc----cEeEe----ecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecc--c-c-CcEEEEEEcCCCC
Confidence            9962    11111    12456779999999999999864   467999999965443322  2 2 2478999999999


Q ss_pred             EEEEeeC------CCcEEEEEcCCcceEEEE
Q psy17188        453 VCFSCCS------DGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       453 ~l~s~~~------dg~i~iwd~~~~~~~~~~  477 (504)
                      +|+++..      |..++||+.. |+++...
T Consensus       157 ~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  157 YLATATTSPRLRVDNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             EEEEEEeccceeccccEEEEEec-CeEeEec
Confidence            9998864      6789999984 6665543

>KOG2314|consensus

Probab=99.64  E-value=2.5e-13  Score=121.58  Aligned_cols=312  Identities=13%  Similarity=0.148  Sum_probs=195.2

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-----------CCcEEE
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-----------DGNIAV  229 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------dg~i~i  229 (504)
                      .=+-+.|||-|.||++--.. -|.+|--.+-..  ...+ .|. .|.-+.|||..+||++-+.           ...++|
T Consensus       212 Tetyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r--~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I  286 (698)
T KOG2314|consen  212 TETYVRWSPKGTYLVTFHKQ-GIALWGGESFDR--IQRF-YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII  286 (698)
T ss_pred             eeeeEEecCCceEEEEEecc-ceeeecCccHHH--HHhc-cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence            34678999999999998654 488997654332  2222 233 3888999999999998653           256999


Q ss_pred             EECCCCeEEEeecCCCC--Ce-EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        230 WDLHNQTLVRQFQGHTD--GA-SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~--~v-~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      ||+.+|...+.|....+  .+ .-..|+.|++++|--.. ..|.|++..+-.+  ++.             ..-.-..|.
T Consensus       287 WDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~l--ld~-------------Kslki~gIr  350 (698)
T KOG2314|consen  287 WDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFML--LDK-------------KSLKISGIR  350 (698)
T ss_pred             EEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceee--ecc-------------cccCCcccc
Confidence            99999999888875222  22 34679999999987766 4688888765321  110             011234578


Q ss_pred             EEEEcCCCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee--------ccCCCeEE
Q psy17188        307 SVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS--------HHYKSCVK  373 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~i~  373 (504)
                      ...|+|.++.|+.-...     ..+.+..+.+.+..  ....-+.-.-..+.|-.+|..+.+-+        .+.-..+.
T Consensus       351 ~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~i--Rt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~e  428 (698)
T KOG2314|consen  351 DFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREI--RTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLE  428 (698)
T ss_pred             CcccCCCcceEEEEcccccCCcceEEEEecCcccee--eeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEE
Confidence            89999998888764322     13444444443222  11112222223445555665432222        11223456


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC---CCcEEEeeCCCCC--cceeecccCCCCceeEEEEC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPT--PRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~s  448 (504)
                      |+.++.......     ...-...|...+|-|.|..+++-+.   ..++.+|.+++..  ...+..+..  ...+.+.|+
T Consensus       429 IfrireKdIpve-----~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfws  501 (698)
T KOG2314|consen  429 IFRIREKDIPVE-----VVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWS  501 (698)
T ss_pred             EEEeeccCCCce-----eeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEc
Confidence            666654322211     1233566889999999998877543   3468889887422  222222322  456788999


Q ss_pred             CCCCEEEEe---eCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188        449 PDSKVCFSC---CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       449 ~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      |.|++++.+   +..|.+.++|+....+...-.......+.+.|.|.|+|++|++.-
T Consensus       502 PkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~  558 (698)
T KOG2314|consen  502 PKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSS  558 (698)
T ss_pred             CCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeeh
Confidence            999999876   457899999988533322222222357789999999999998753

>KOG2314|consensus

Probab=99.64  E-value=8.7e-13  Score=118.24  Aligned_cols=323  Identities=16%  Similarity=0.186  Sum_probs=201.8

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-----------CCCcEE
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-----------EASNLS  184 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------~dg~i~  184 (504)
                      -+-+.|||.|.||++-...-|.+|-=.+      ......+.|. .|.-+.|||+.+||++-+           ....++
T Consensus       213 etyv~wSP~GTYL~t~Hk~GI~lWGG~~------f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~  285 (698)
T KOG2314|consen  213 ETYVRWSPKGTYLVTFHKQGIALWGGES------FDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLI  285 (698)
T ss_pred             eeeEEecCCceEEEEEeccceeeecCcc------HHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEE
Confidence            3678999999999999988899996332      2233333454 488999999999999954           225699


Q ss_pred             EEeCCCCCccceeeeecCcCce-EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        185 IWDLASPTPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      |||+.++..............+ .-..||.|++++|.-.. ..|.||+..+..++..-.-.-..|....|+|.++.||-=
T Consensus       286 IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw  364 (698)
T KOG2314|consen  286 IWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW  364 (698)
T ss_pred             EEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence            9999988754333321122222 34689999999998766 579999988765554434455778899999987776643


Q ss_pred             cCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe----------CCCcEEE
Q psy17188        264 GLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSI  328 (504)
Q Consensus       264 ~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~v  328 (504)
                      ...     ..+.+..+.+++.             +....  -+.-.=..+-|-.+|.+|++--          .-..+.|
T Consensus       365 tpe~~~~parvtL~evPs~~~-------------iRt~n--lfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eI  429 (698)
T KOG2314|consen  365 TPETNNIPARVTLMEVPSKRE-------------IRTKN--LFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEI  429 (698)
T ss_pred             cccccCCcceEEEEecCccce-------------eeecc--ceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEE
Confidence            211     1233333333221             00000  0111112355667788877531          1123666


Q ss_pred             EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC-CCeEEEEecCCC-CCCCcccccccccCCCceEEEEEcCC
Q psy17188        329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-KSCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPD  406 (504)
Q Consensus       329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~  406 (504)
                      +.++... .. ...-.-...+...+|-|.|....++++.. ..++.+|.+++. .....+..+.    ....+.+.|+|.
T Consensus       430 frireKd-Ip-ve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d----k~~~N~vfwsPk  503 (698)
T KOG2314|consen  430 FRIREKD-IP-VEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD----KKFANTVFWSPK  503 (698)
T ss_pred             EEeeccC-CC-ceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc----ccccceEEEcCC
Confidence            6666543 11 12222334788999999999766666543 457899988842 2222222222    244568999999


Q ss_pred             CCEEEEe---eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC------CcEEEEEcC
Q psy17188        407 GRTLIVG---GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLH  469 (504)
Q Consensus       407 g~~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d------g~i~iwd~~  469 (504)
                      |++++++   +..|.+.++|....... ......|. ..+.+.|.|.|+|+++++.-      .--+||+++
T Consensus       504 G~fvvva~l~s~~g~l~F~D~~~a~~k-~~~~~eh~-~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq  573 (698)
T KOG2314|consen  504 GRFVVVAALVSRRGDLEFYDTDYADLK-DTASPEHF-AATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ  573 (698)
T ss_pred             CcEEEEEEecccccceEEEecchhhhh-hccCcccc-ccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence            9998876   45788999998742221 12222232 35677999999999998763      335666654

>KOG0974|consensus

Probab=99.64  E-value=1.3e-12  Score=125.82  Aligned_cols=147  Identities=21%  Similarity=0.350  Sum_probs=123.8

Q ss_pred             EEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceee
Q psy17188        120 TISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  198 (504)
Q Consensus       120 ~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  198 (504)
                      -++++.-++++|+ -+.|.+|+....  ..+.   ...+|++.|.++.|+.||+++++.++|.++++|++++.+.. ...
T Consensus       140 g~s~~~~~i~~gsv~~~iivW~~~~d--n~p~---~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~-~~~  213 (967)
T KOG0974|consen  140 GDSAEELYIASGSVFGEIIVWKPHED--NKPI---RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVL-GCT  213 (967)
T ss_pred             eccCcEEEEEeccccccEEEEecccc--CCcc---eecccCCceEEEEEccCCcEEEEEecCcceeeeeccccccc-Ccc
Confidence            3567777888888 899999998732  2222   34499999999999999999999999999999999987653 346


Q ss_pred             eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      .-+|...|..++|.|+  .+++++.|.+.++|+.+ ++.+..+.+|. ..+..++..++...++|++.|+.+++|++.
T Consensus       214 ~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~  288 (967)
T KOG0974|consen  214 GFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN  288 (967)
T ss_pred             cccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence            6789999999999998  89999999999999754 45555777776 468999999988899999999999999976

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.64  E-value=7.4e-14  Score=115.98  Aligned_cols=152  Identities=18%  Similarity=0.392  Sum_probs=111.4

Q ss_pred             EEEEEcCCCcEEEEecC-----------CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe--cCCCcE
Q psy17188        117 CAVTISNPTKYVYTGGK-----------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG--GEASNL  183 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d-----------~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i  183 (504)
                      ..+.|+++|++|+.-.+           +...||.++..+  .+...+.. ...+.|.+++|+|+++.+|+.  ..++.|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~--~~~~~i~l-~~~~~I~~~~WsP~g~~favi~g~~~~~v   85 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN--IPVESIEL-KKEGPIHDVAWSPNGNEFAVIYGSMPAKV   85 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC--Cccceeec-cCCCceEEEEECcCCCEEEEEEccCCccc
Confidence            56788999987765331           346666664432  22333332 345679999999999987654  467799


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      .+||++.   .....+  +...+..+.|+|+|++|++++.+   |.|.+||+++.+.+.... |. .++.++|+|||++|
T Consensus        86 ~lyd~~~---~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~  158 (194)
T PF08662_consen   86 TLYDVKG---KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYL  158 (194)
T ss_pred             EEEcCcc---cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEE
Confidence            9999962   223333  34567899999999999998753   669999999999888876 44 47899999999999


Q ss_pred             EEEcC------CCeEEEEECCCCc
Q psy17188        261 WTGGL------DNTVRSWDLREGC  278 (504)
Q Consensus       261 ~s~~~------dg~i~~wd~~~~~  278 (504)
                      +++..      |+.++||+.....
T Consensus       159 ~ta~t~~r~~~dng~~Iw~~~G~~  182 (194)
T PF08662_consen  159 ATATTSPRLRVDNGFKIWSFQGRL  182 (194)
T ss_pred             EEEEeccceeccccEEEEEecCeE
Confidence            98864      7888999986544

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=7.1e-13  Score=126.52  Aligned_cols=234  Identities=17%  Similarity=0.146  Sum_probs=147.6

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      .|.++|.+..+   ...+..+...+....|+|||+.|+..+.+   ..|.+||+.+++... +....+.+....|+|||+
T Consensus       180 ~l~~~d~~g~~---~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~  255 (430)
T PRK00178        180 TLQRSDYDGAR---AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGS  255 (430)
T ss_pred             EEEEECCCCCC---ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCC
Confidence            47778877544   23445566778999999999988876643   369999999886543 332344556789999999


Q ss_pred             EEE-EEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CC--cEEEEeCC
Q psy17188        259 KLW-TGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-AS--NLSIWDLA  332 (504)
Q Consensus       259 ~l~-s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~  332 (504)
                      .|+ +.+.++  .|++||+.+++...                ...+........|+|||+.|+..+. ++  .|+++++.
T Consensus       256 ~la~~~~~~g~~~Iy~~d~~~~~~~~----------------lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~  319 (430)
T PRK00178        256 KLAFVLSKDGNPEIYVMDLASRQLSR----------------VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN  319 (430)
T ss_pred             EEEEEEccCCCceEEEEECCCCCeEE----------------cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC
Confidence            876 444455  68888998876431                1122233456789999998876653 33  35555544


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~  412 (504)
                      +++..             .+.+.                                       ........|+|||++|+.
T Consensus       320 ~g~~~-------------~lt~~---------------------------------------~~~~~~~~~Spdg~~i~~  347 (430)
T PRK00178        320 GGRAE-------------RVTFV---------------------------------------GNYNARPRLSADGKTLVM  347 (430)
T ss_pred             CCCEE-------------EeecC---------------------------------------CCCccceEECCCCCEEEE
Confidence            33210             00000                                       001124678999998887


Q ss_pred             eeCC-C--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC---CcEEEEEcCCcceEEEEeecCCceEE
Q psy17188        413 GGEA-S--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASC  486 (504)
Q Consensus       413 ~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~  486 (504)
                      ...+ +  .|.+||+.+++....... ...   ....|+|||++++..+.+   ..++++++. +.....+..+.+.+..
T Consensus       348 ~~~~~~~~~l~~~dl~tg~~~~lt~~-~~~---~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~  422 (430)
T PRK00178        348 VHRQDGNFHVAAQDLQRGSVRILTDT-SLD---ESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVRE  422 (430)
T ss_pred             EEccCCceEEEEEECCCCCEEEccCC-CCC---CCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCC
Confidence            6643 2  488899887754433221 111   234899999999877654   347777774 4444456555667788


Q ss_pred             EEEccC
Q psy17188        487 IDISAD  492 (504)
Q Consensus       487 ~~~s~d  492 (504)
                      .+|+|-
T Consensus       423 p~ws~~  428 (430)
T PRK00178        423 PSWSPY  428 (430)
T ss_pred             CccCCC
Confidence            888873

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.62  E-value=3.4e-12  Score=113.42  Aligned_cols=308  Identities=17%  Similarity=0.197  Sum_probs=206.2

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-------------
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-------------  224 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------------  224 (504)
                      ..-++..++|||.|.+|++... ..|.+|.-.....  ...+.  ...|..+.|+|++++|.+=+..             
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~--l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~  105 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAK--LVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFT  105 (561)
T ss_pred             cCcchhheeecCcchheehhhc-cceEEccccchhh--eeeee--cCCceecccCcccceeeeeccCCccChhhccCCcc
Confidence            4567889999999999998765 4689998776541  22222  2348999999999999986643             


Q ss_pred             --CcEEEEECCCCeEEEeecCCCCC--eE-EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        225 --GNIAVWDLHNQTLVRQFQGHTDG--AS-CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       225 --g~i~iwd~~~~~~~~~~~~h~~~--v~-~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                        ..+.+||+.++..+..+.....+  .. -+.|+-+.++++-. ....+.++++ ++.+.         ..+...+.  
T Consensus       106 ~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~---------~~p~~~lr--  172 (561)
T COG5354         106 SKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIE---------EHPFKNLR--  172 (561)
T ss_pred             ccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccc---------cCchhhcc--
Confidence              35999999999999999876655  44 57888887766544 2346888887 44321         11111111  


Q ss_pred             ccCCceEEEEEcCCC--CEEEE-----EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc-----
Q psy17188        300 QRDNYIRSVKLLPDG--RTLIV-----GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH-----  367 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~--~~l~~-----~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----  367 (504)
                        ...+....|+|.+  ..|+.     ....+.+++|.+..+.......+..  ..-..+.|.+.++.+++.+-.     
T Consensus       173 --~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk--~~~~qLkW~~~g~~ll~l~~t~~ksn  248 (561)
T COG5354         173 --PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFK--VSGVQLKWQVLGKYLLVLVMTHTKSN  248 (561)
T ss_pred             --ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEe--ecccEEEEecCCceEEEEEEEeeecc
Confidence              3558888999964  33443     3456789999987654333333322  234567788888865544322     


Q ss_pred             ----CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee--CCCcEEEeeCCCCCcceeecccCCCCc
Q psy17188        368 ----YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPA  441 (504)
Q Consensus       368 ----~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~  441 (504)
                          .+..+.+++++........      ...++|...+|.|.++.+++.+  .+-.+.++|++..  +......   ..
T Consensus       249 KsyfgesnLyl~~~~e~~i~V~~------~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe---~~  317 (561)
T COG5354         249 KSYFGESNLYLLRITERSIPVEK------DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPE---QK  317 (561)
T ss_pred             cceeccceEEEEeecccccceec------cccccceeeeecccCCceeEEecccccceeecccccc--eEEecCC---cc
Confidence                1356788887743221111      3467899999999988776654  6778999999864  2222222   22


Q ss_pred             eeEEEECCCCCEEEEeeCC---CcEEEEEcCCcceEE-EEeecCCceEEEEEccCCCEEEEec
Q psy17188        442 CYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       442 v~~l~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~-~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      =+.+.|+|.+++++.++-|   |.+-+||......+. .+.+  ....-+.|+||++++.++-
T Consensus       318 rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~~  378 (561)
T COG5354         318 RNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTDT  378 (561)
T ss_pred             cccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec--CCceEeeccCCceEEEecC
Confidence            3445999999999987754   789999987765544 5553  3356678999999988754

>KOG1354|consensus

Probab=99.62  E-value=2.1e-13  Score=115.01  Aligned_cols=260  Identities=14%  Similarity=0.280  Sum_probs=162.8

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC-ce-eeee----------ecCCCCceEEEEEccCCC--EEE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT-PV-SQLD----------CLQRDNYIRSVKLLPDGR--TLI  175 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~-~~-~~~~----------~~~~~~~v~~~~~s~~~~--~l~  175 (504)
                      ...+-|.+|.|...|.+|++|+ +|.|.++.-+...... .+ ..++          ...-...|..+.|.++++  .++
T Consensus        23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            3456789999999999999999 9999999755432110 01 1111          111235688999998654  556


Q ss_pred             EecCCCcEEEEeCCCCCccc------------------e----------------eeeecCcCceEEEEECCCCCEEEEE
Q psy17188        176 VGGEASNLSIWDLASPTPRI------------------K----------------AELTSSAPACYALAISPDSKVCFSC  221 (504)
Q Consensus       176 ~~~~dg~i~iw~~~~~~~~~------------------~----------------~~~~~~~~~v~~~~~s~~~~~l~~~  221 (504)
                      ..+.|.+|++|.+.....+.                  .                .--..|.-.|.++.++.|...++++
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA  182 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA  182 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence            66789999999886432111                  0                0112466678999999999888877


Q ss_pred             eCCCcEEEEECCCCe-E--EEeecCC-----CCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCce-----EEEeecCC
Q psy17188        222 CSDGNIAVWDLHNQT-L--VRQFQGH-----TDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCV-----KVWDISQP  287 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~-~--~~~~~~h-----~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~-----~~~~~~~~  287 (504)
                       .|=.|.+|+++--. .  +-.++.+     ..-|++..|+|. -+.++-.+..|+|++-|++...+     ++++.+..
T Consensus       183 -DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped  261 (433)
T KOG1354|consen  183 -DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED  261 (433)
T ss_pred             -cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence             56789999986321 1  1222222     245788899994 55788888899999999995432     22222211


Q ss_pred             CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC------------C---ceeeE
Q psy17188        288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA------------P---ACYAL  352 (504)
Q Consensus       288 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~------------~---~i~~~  352 (504)
                      ...    .--...--..|..+.|+++|+++++-.. -++++||+..... +....+.|.            .   .-..+
T Consensus       262 p~~----rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~-pv~t~~vh~~lr~kLc~lYEnD~IfdKFec  335 (433)
T KOG1354|consen  262 PSS----RSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAK-PVETYPVHEYLRSKLCSLYENDAIFDKFEC  335 (433)
T ss_pred             Ccc----hhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCC-cceEEeehHhHHHHHHHHhhccchhheeEE
Confidence            111    1111122356889999999999998643 5899999965432 222222211            1   11234


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      +|+.++.  .+.+|+..+.+++|+...
T Consensus       336 ~~sg~~~--~v~TGsy~n~frvf~~~~  360 (433)
T KOG1354|consen  336 SWSGNDS--YVMTGSYNNVFRVFNLAR  360 (433)
T ss_pred             EEcCCcc--eEecccccceEEEecCCC
Confidence            5555555  567777777777776543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.62  E-value=1.5e-11  Score=109.78  Aligned_cols=282  Identities=15%  Similarity=0.092  Sum_probs=165.6

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----------CCcEEEEeCCCCCccceeeeecC-
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSS-  202 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~-  202 (504)
                      ++|.+.|.++.+....+.   . +..  -..+ ++||++.|+++..          +..|.+||..+.+......+... 
T Consensus        27 ~~v~ViD~~~~~v~g~i~---~-G~~--P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p   99 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTD---G-GFL--PNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGP   99 (352)
T ss_pred             ceEEEEECCCCEEEEEEE---c-cCC--Ccee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCc
Confidence            799999998753322222   1 211  1234 9999999888754          78899999998775433333211 


Q ss_pred             ----cCceEEEEECCCCCEEEEEe-C-CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        203 ----APACYALAISPDSKVCFSCC-S-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       203 ----~~~v~~~~~s~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                          ...-..++++|||++|++.. . +..|.+.|+.+++.+.++.-. +...-...+++..+  .-+.||......+.+
T Consensus       100 ~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~  176 (352)
T TIGR02658       100 RFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFF--MHCRDGSLAKVGYGT  176 (352)
T ss_pred             hhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC-CCcEEEEecCCccE--EEeecCceEEEEecC
Confidence                12234689999999988776 3 688999999999999988742 22222222222211  223455444433332


Q ss_pred             -CceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        277 -GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                       |+...-...--..    ......  ..+    .|.+ +|+++.+..+ |+|.+.|+..........             
T Consensus       177 ~g~~~~~~~~vf~~----~~~~v~--~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~-------------  232 (352)
T TIGR02658       177 KGNPKIKPTEVFHP----EDEYLI--NHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPA-------------  232 (352)
T ss_pred             CCceEEeeeeeecC----Cccccc--cCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecce-------------
Confidence             2211000000000    000000  111    3455 8888888776 999999976543211111             


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee----------CCCcEEEeeC
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDL  424 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----------~dg~i~iwd~  424 (504)
                                          |.+-.......      .-....+.-++++++++++++..          ..+.|.++|.
T Consensus       233 --------------------~~~~~~~~~~~------~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~  286 (352)
T TIGR02658       233 --------------------IEAFTEAEKAD------GWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA  286 (352)
T ss_pred             --------------------eeecccccccc------ccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence                                11100000000      00112222488999988888743          1246999999


Q ss_pred             CCCCcceeecccCCCCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEEe
Q psy17188        425 ASPTPRIKAELTSSAPACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~  478 (504)
                      .+.+.+......   ..+..++++||++ +|++.. .++.|.++|..+++.+.++.
T Consensus       287 ~t~kvi~~i~vG---~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       287 KTGKRLRKIELG---HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             CCCeEEEEEeCC---CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            988766555543   3577889999999 777666 57889999999999999884

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.61  E-value=8.4e-13  Score=126.01  Aligned_cols=233  Identities=18%  Similarity=0.193  Sum_probs=146.1

Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCC
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      ..|.++|....+   ...+..+...+...+|+||+++|+.+..+   ..|++||+.+++.... ..+...+.+++|+||+
T Consensus       170 ~~l~~~d~~g~~---~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg  245 (417)
T TIGR02800       170 YELQVADYDGAN---PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDG  245 (417)
T ss_pred             ceEEEEcCCCCC---CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCC
Confidence            358888876443   23344556668899999999999887654   4799999998865433 3355667789999999


Q ss_pred             CEEEE-EcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CC--cEEEEeC
Q psy17188        258 TKLWT-GGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-AS--NLSIWDL  331 (504)
Q Consensus       258 ~~l~s-~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~  331 (504)
                      +.|+. .+.++  .|++||+.++....              +  ..+........|+|+|+.|+..+. ++  .|+++|+
T Consensus       246 ~~l~~~~~~~~~~~i~~~d~~~~~~~~--------------l--~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~  309 (417)
T TIGR02800       246 SKLAVSLSKDGNPDIYVMDLDGKQLTR--------------L--TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDA  309 (417)
T ss_pred             CEEEEEECCCCCccEEEEECCCCCEEE--------------C--CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence            87764 44444  58889988776321              1  112223345689999998876654 23  3555554


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      .+++..             .+.                                       .+........|+|+|++|+
T Consensus       310 ~~~~~~-------------~l~---------------------------------------~~~~~~~~~~~spdg~~i~  337 (417)
T TIGR02800       310 DGGEVR-------------RLT---------------------------------------FRGGYNASPSWSPDGDLIA  337 (417)
T ss_pred             CCCCEE-------------Eee---------------------------------------cCCCCccCeEECCCCCEEE
Confidence            432100             000                                       0112233678999999988


Q ss_pred             EeeCCC---cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC---cEEEEEcCCcceEEEEeecCCceE
Q psy17188        412 VGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTDGAS  485 (504)
Q Consensus       412 ~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~  485 (504)
                      .++.++   .|.+||+.++....... ..   ......|+||+++|+..+.++   .+++.+. +++....+..+.+.+.
T Consensus       338 ~~~~~~~~~~i~~~d~~~~~~~~l~~-~~---~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~  412 (417)
T TIGR02800       338 FVHREGGGFNIAVMDLDGGGERVLTD-TG---LDESPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVR  412 (417)
T ss_pred             EEEccCCceEEEEEeCCCCCeEEccC-CC---CCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcC
Confidence            887765   78899988754332221 11   123458999999998877654   3555554 4555555554455565


Q ss_pred             EEEEc
Q psy17188        486 CIDIS  490 (504)
Q Consensus       486 ~~~~s  490 (504)
                      .++|+
T Consensus       413 ~~~ws  417 (417)
T TIGR02800       413 EPAWS  417 (417)
T ss_pred             CCCCC
Confidence            55553

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=8.3e-13  Score=125.36  Aligned_cols=233  Identities=18%  Similarity=0.183  Sum_probs=143.5

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-C--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      .|.++|.+..+.   ..+..+...+....|+|||+.|+..+.+ +  .|++||+.+++... +....+......|+|||+
T Consensus       199 ~l~i~d~dG~~~---~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~  274 (448)
T PRK04792        199 QLMIADYDGYNE---QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGK  274 (448)
T ss_pred             EEEEEeCCCCCc---eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCC
Confidence            577778765443   3344556678899999999988876543 2  58899998876533 222233345789999999


Q ss_pred             EEEE-EcCCCe--EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCc--EEEEeCC
Q psy17188        259 KLWT-GGLDNT--VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASN--LSIWDLA  332 (504)
Q Consensus       259 ~l~s-~~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~v~d~~  332 (504)
                      .|+. .+.++.  |+++|+.+++.+.                ...+.......+|+|||+.|+..+. ++.  |+++|+.
T Consensus       275 ~La~~~~~~g~~~Iy~~dl~tg~~~~----------------lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~  338 (448)
T PRK04792        275 KLALVLSKDGQPEIYVVDIATKALTR----------------ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA  338 (448)
T ss_pred             EEEEEEeCCCCeEEEEEECCCCCeEE----------------CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence            7765 455664  7788888776421                1122334567789999998877653 333  4444444


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~  412 (504)
                      +++..             .+.+                                       ........+|+|||++|+.
T Consensus       339 ~g~~~-------------~Lt~---------------------------------------~g~~~~~~~~SpDG~~l~~  366 (448)
T PRK04792        339 SGKVS-------------RLTF---------------------------------------EGEQNLGGSITPDGRSMIM  366 (448)
T ss_pred             CCCEE-------------EEec---------------------------------------CCCCCcCeeECCCCCEEEE
Confidence            33110             0000                                       0001124578889888877


Q ss_pred             eeCC-C--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC-C--cEEEEEcCCcceEEEEeecCCceEE
Q psy17188        413 GGEA-S--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVRQFQGHTDGASC  486 (504)
Q Consensus       413 ~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~  486 (504)
                      .+.+ +  .|.++|+.+++....... ..   .....|+|||++|+..+.+ +  .+++++. +|+....+..+.+.+..
T Consensus       367 ~~~~~g~~~I~~~dl~~g~~~~lt~~-~~---d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~  441 (448)
T PRK04792        367 VNRTNGKFNIARQDLETGAMQVLTST-RL---DESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKS  441 (448)
T ss_pred             EEecCCceEEEEEECCCCCeEEccCC-CC---CCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCC
Confidence            6543 3  356677776654332211 11   1234899999998876543 3  3777786 56666777766677888


Q ss_pred             EEEcc
Q psy17188        487 IDISA  491 (504)
Q Consensus       487 ~~~s~  491 (504)
                      .+|+|
T Consensus       442 p~Wsp  446 (448)
T PRK04792        442 PAWSP  446 (448)
T ss_pred             CccCC
Confidence            89987

>KOG1409|consensus

Probab=99.61  E-value=1e-13  Score=116.82  Aligned_cols=302  Identities=17%  Similarity=0.252  Sum_probs=197.9

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC-CceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  181 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  181 (504)
                      ..+..+ ||.+.|++...-|...-+.+.+ |.+++||--....+. ..+.    +....+++++.+.++.+.|++|-..|
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~----~~mP~~~~~~~y~~e~~~L~vg~~ng   90 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIY----HYMPSPCSAMEYVSESRRLYVGQDNG   90 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhh----hhCCCCceEeeeeccceEEEEEEecc
Confidence            344555 8999999988888666666666 999999975443222 2222    13467899999999999999999999


Q ss_pred             cEEEEeCCCC--CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC--------------------------
Q psy17188        182 NLSIWDLASP--TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--------------------------  233 (504)
Q Consensus       182 ~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--------------------------  233 (504)
                      ++.-+.+...  +.........|...+..+-|+-...++++.+.|..+.---.+                          
T Consensus        91 tvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fv  170 (404)
T KOG1409|consen   91 TVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFV  170 (404)
T ss_pred             eEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEe
Confidence            9998876532  222344556778888888887766677766665433211111                          


Q ss_pred             ---------------CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        234 ---------------NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       234 ---------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                                     .-.++.++.+|.+.+.+++|.+...+|++|..|..+.+||+...+-.              ....
T Consensus       171 Gd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~--------------~~el  236 (404)
T KOG1409|consen  171 GDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT--------------AYEL  236 (404)
T ss_pred             cccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcce--------------eeee
Confidence                           11346677899999999999999899999999999999999866533              4455


Q ss_pred             cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee---------------------------eccC----CC
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE---------------------------LTSS----AP  347 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---------------------------~~~~----~~  347 (504)
                      ..|...|..+...+--+.+++++.||.|.+|+++........-                           +..|    -+
T Consensus       237 ~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg  316 (404)
T KOG1409|consen  237 QGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCG  316 (404)
T ss_pred             ccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhh
Confidence            6777888888888888899999999999999986542110000                           0000    00


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC--CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK--TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ...+...+.+  +....+-+.+-.+|+-|--.....  ..............|+.+.+...-.+|++++.|..|+|||++
T Consensus       317 ~avc~~c~s~--~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~  394 (404)
T KOG1409|consen  317 KAVCGKCSSN--RSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVR  394 (404)
T ss_pred             hhcCcccccC--ccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEech
Confidence            1111111111  112333333444555543221111  111111222334568899998888899999999999999987


Q ss_pred             C
Q psy17188        426 S  426 (504)
Q Consensus       426 ~  426 (504)
                      .
T Consensus       395 ~  395 (404)
T KOG1409|consen  395 S  395 (404)
T ss_pred             h
Confidence            4

>KOG1409|consensus

Probab=99.60  E-value=2e-13  Score=115.12  Aligned_cols=246  Identities=14%  Similarity=0.256  Sum_probs=181.9

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-  234 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-  234 (504)
                      .+|.+.+++...-|...-+++.+.|.+++||--.+..............+++++.+.++...|+++-.+|++.-+.+.. 
T Consensus        21 eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sed  100 (404)
T KOG1409|consen   21 EGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSED  100 (404)
T ss_pred             cCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhh
Confidence            3788888888888888889999999999999654433222222333456689999999999999999999999887653 


Q ss_pred             ---CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        235 ---QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       235 ---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                         ....+....|...+..+-|+-....+++.+.|..+.---.+.+.-                +..........++.+.
T Consensus       101 fnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~----------------lg~Y~~~~~~t~~~~d  164 (404)
T KOG1409|consen  101 FNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNR----------------LGGYNFETPASALQFD  164 (404)
T ss_pred             hhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCc----------------ccceEeeccCCCCcee
Confidence               455666677999999999998888999999998765444444331                1000000111111111


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188        312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  391 (504)
                      -.  +..+|...|.+....+..........+.+|...+.+++|.+...  ++.++..|..+.+||+-....    .....
T Consensus       165 ~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~--~LfSg~~d~~vi~wdigg~~g----~~~el  236 (404)
T KOG1409|consen  165 AL--YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQR--LLFSGASDHSVIMWDIGGRKG----TAYEL  236 (404)
T ss_pred             eE--EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCc--EEEeccccCceEEEeccCCcc----eeeee
Confidence            11  56667777888888777777788889999999999999999888  899999999999999965322    23334


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ..|...|..+...+--+.+.+++.||.|.+|+.+
T Consensus       237 ~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  237 QGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             ccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence            4667777788777777889999999999999975

>KOG1912|consensus

Probab=99.59  E-value=1.2e-12  Score=122.00  Aligned_cols=375  Identities=14%  Similarity=0.140  Sum_probs=241.0

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC------------CCEEEEecCCCcE
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD------------GRTLIVGGEASNL  183 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------------~~~l~~~~~dg~i  183 (504)
                      -.++.|+|.| ++|.|+...|.+-|..+-+.   ++.+.  .|...|+.+.|.|-            .-.||++...|.|
T Consensus        18 ~~A~Dw~~~G-LiAygshslV~VVDs~s~q~---iqsie--~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrI   91 (1062)
T KOG1912|consen   18 RNAADWSPSG-LIAYGSHSLVSVVDSRSLQL---IQSIE--LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRI   91 (1062)
T ss_pred             ccccccCccc-eEEEecCceEEEEehhhhhh---hhccc--cCccceeEEEeccCCCchhccCccccceeEEeccccCcE
Confidence            4678888876 78888888999999876433   33333  57899999999872            1267888889999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECC---CC-CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCC
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISP---DS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGT  258 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~  258 (504)
                      .+||.....  .+..+..|..++..++|-+   +. ..|++-....++.+|+..+|+.............|+.+.| |.+
T Consensus        92 il~d~~~~s--~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~r  169 (1062)
T KOG1912|consen   92 ILVDFVLAS--VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSR  169 (1062)
T ss_pred             EEEEehhhh--hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcc
Confidence            999998654  3566778888899999976   33 4677777788999999999999998887777788899999 777


Q ss_pred             EEEEEcCCCeEEEEECCCC-----ceEEEeecCCCCCCCc---------ccceecc---cCCceEEEEEcCCCCEEEEEe
Q psy17188        259 KLWTGGLDNTVRSWDLREG-----CVKVWDISQPGSKTPV---------SQLDCLQ---RDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~-----~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      .+..-+..|.+.+-+.-..     ..+.+.+..+-+....         .......   .......++|+|.-+.++...
T Consensus       170 h~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~  249 (1062)
T KOG1912|consen  170 HFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFIT  249 (1062)
T ss_pred             eEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEE
Confidence            7777777787777664321     1223333322111000         0000000   000123467788766666666


Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc-ccccCC-----
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL-DCLQRD-----  395 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~-----  395 (504)
                      ....+.++|++-......  ..-..+.+.-+.+-|+.+...+.+...+|.+.+|-.+........... -.....     
T Consensus       250 ~prellv~dle~~~~l~v--vpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~  327 (1062)
T KOG1912|consen  250 FPRELLVFDLEYECCLAV--VPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHV  327 (1062)
T ss_pred             eccceEEEcchhhceeEE--EEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEE
Confidence            778899999987644433  333444667788889988889999999999999987653222111000 000011     


Q ss_pred             ------CceEEEEEcCC-CCEEEEeeCCCcEEEeeCCCCCccee-----------------------------ecccCCC
Q psy17188        396 ------NYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIK-----------------------------AELTSSA  439 (504)
Q Consensus       396 ------~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~~~~~~~~-----------------------------~~~~~~~  439 (504)
                            ..+......|. ...++.--.+|...+|.+.+++.-..                             .....|.
T Consensus       328 vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~  407 (1062)
T KOG1912|consen  328 VRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHS  407 (1062)
T ss_pred             EeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCC
Confidence                  11222233333 33344444577788888774421100                             0011222


Q ss_pred             CceeEEEECC-----------CC-------CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        440 PACYALAISP-----------DS-------KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       440 ~~v~~l~~s~-----------~~-------~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ...++....|           .+       .++|.|...|+|.++|+.++..-+.+..|...|.++.|.... .|++.+.
T Consensus       408 sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~s-slvSfsy  486 (1062)
T KOG1912|consen  408 SGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNS-SLVSFSY  486 (1062)
T ss_pred             CCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccce-eEEEeee
Confidence            2333322222           12       367889999999999999999999999999999999998654 3455443

>KOG3881|consensus

Probab=99.59  E-value=6.8e-13  Score=113.89  Aligned_cols=250  Identities=17%  Similarity=0.195  Sum_probs=177.7

Q ss_pred             CCCcEEEEEEcCC--CcEEEEec-CCeEEEEeCCCCCCCCceeee-eecCCCCceEEEEEccCCCEEEEecCCCcEEEEe
Q psy17188        112 HGEVVCAVTISNP--TKYVYTGG-KGCVKVWDISQPGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       112 h~~~V~~v~~s~~--~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~  187 (504)
                      -...|+.++|..+  ...+...+ |..+..+.++..+.....-.. ........|..++.. |+ .|++|-.+|.+.+|.
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~  131 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSGNLQVRH  131 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CC-EEEEEecCCcEEEEe
Confidence            3456677777644  35566553 777777777665433332111 122345667666654 34 577777899999999


Q ss_pred             CCCCC--ccceeeeecCcCceEEEEECCCCC-EEEEEeCC--CcEEEEECCCCeEEEeecCC---------CCCeEEEEE
Q psy17188        188 LASPT--PRIKAELTSSAPACYALAISPDSK-VCFSCCSD--GNIAVWDLHNQTLVRQFQGH---------TDGASCIDI  253 (504)
Q Consensus       188 ~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d--g~i~iwd~~~~~~~~~~~~h---------~~~v~~~~~  253 (504)
                      .+.+.  ......+..+ ..+..+.-++... .+++|+..  ..+.|||+...+.+.+-+.-         .-.++++.|
T Consensus       132 ~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~F  210 (412)
T KOG3881|consen  132 DKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRF  210 (412)
T ss_pred             ccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeecccee
Confidence            88543  2223333333 3466666666544 55568888  78999999988666554322         235678889


Q ss_pred             ccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        254 SAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       254 ~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      .+.  ...|++++.-+.+++||.+.++-.              .....-....++++...|+++++++|...+.+..||+
T Consensus       211 l~g~~~~~fat~T~~hqvR~YDt~~qRRP--------------V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~  276 (412)
T KOG3881|consen  211 LEGSPNYKFATITRYHQVRLYDTRHQRRP--------------VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDL  276 (412)
T ss_pred             cCCCCCceEEEEecceeEEEecCcccCcc--------------eeEeccccCcceeeeecCCCcEEEEecccchhheecc
Confidence            886  789999999999999999977532              2222334678999999999999999999999999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      +.+. .....+.+-.+.+.++..+|..+  ++++++-|..+||+|+++..
T Consensus       277 r~~k-l~g~~~kg~tGsirsih~hp~~~--~las~GLDRyvRIhD~ktrk  323 (412)
T KOG3881|consen  277 RGGK-LLGCGLKGITGSIRSIHCHPTHP--VLASCGLDRYVRIHDIKTRK  323 (412)
T ss_pred             cCce-eeccccCCccCCcceEEEcCCCc--eEEeeccceeEEEeecccch
Confidence            9864 33344777788999999999988  89999999999999998743

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=4.1e-11  Score=102.69  Aligned_cols=305  Identities=15%  Similarity=0.273  Sum_probs=194.3

Q ss_pred             CCcEEEEeCCCCCcc-ceeeeecCcCceEEEEECCCCCEEEEEeCC---CcEEEEECCC--CeEE--EeecCCCCCeEEE
Q psy17188        180 ASNLSIWDLASPTPR-IKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHN--QTLV--RQFQGHTDGASCI  251 (504)
Q Consensus       180 dg~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~--~~~~--~~~~~h~~~v~~~  251 (504)
                      +..|++|++.+.+.. ....+-.+....+-|+|+|+++.|.++-.+   |.|..|.++.  |++.  ........+.+.+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            567999999854432 223344566678899999999999888654   6677777764  5432  2222233444889


Q ss_pred             EEccCCCEEEEEcCC-CeEEEEECCC-CceEEE-eec-CCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcE
Q psy17188        252 DISADGTKLWTGGLD-NTVRSWDLRE-GCVKVW-DIS-QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNL  326 (504)
Q Consensus       252 ~~~~~~~~l~s~~~d-g~i~~wd~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i  326 (504)
                      ++++++++++++... |.|.++-++. |.+... +.. ..+..     ....+....+....+.|++++|++..- ...|
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~-----p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri  169 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSG-----PHERQESPHVHSANFTPDGRYLVVPDLGTDRI  169 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCC-----CCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence            999999999888764 6888988865 432110 000 00000     001122233788999999999988743 2369


Q ss_pred             EEEeCCCCCccceeeec-cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC-CCCCccccc----ccccCCCceEE
Q psy17188        327 SIWDLASPTPRIKAELT-SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP-GSKTPVSQL----DCLQRDNYIRS  400 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~----~~~~~~~~i~~  400 (504)
                      .+|++..+......... ......+.|.|+|+++. .++..-.+++|.+|+.... .....++..    ...........
T Consensus       170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~-aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa  248 (346)
T COG2706         170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKY-AYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA  248 (346)
T ss_pred             EEEEcccCccccccccccCCCCCcceEEEcCCCcE-EEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence            99999866543322221 34457789999999997 5666778999999998874 222222211    12234556778


Q ss_pred             EEEcCCCCEEEEeeC-CCcEEEeeCCCCC--cceeecccCCCCceeEEEECCCCCEEEEeeCC-CcEEEEEcC--CcceE
Q psy17188        401 VKLLPDGRTLIVGGE-ASNLSIWDLASPT--PRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVWDLH--NQTLV  474 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~-dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-g~i~iwd~~--~~~~~  474 (504)
                      +.+++||++|.++.. ...|.+|.+....  .........+...-....|++++++|+++..+ ..|.+|.++  +|++-
T Consensus       249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~  328 (346)
T COG2706         249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLT  328 (346)
T ss_pred             EEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEE
Confidence            999999999998754 2358888776432  22333333444446778999999999998875 468888764  45543


Q ss_pred             EEEe-ecCCceEEEEEc
Q psy17188        475 RQFQ-GHTDGASCIDIS  490 (504)
Q Consensus       475 ~~~~-~h~~~v~~~~~s  490 (504)
                      .... .......||.|.
T Consensus       329 ~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         329 LLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             ecccccCCCCcEEEEEc
Confidence            3322 233455677664

>KOG1354|consensus

Probab=99.58  E-value=1.9e-13  Score=115.24  Aligned_cols=267  Identities=15%  Similarity=0.235  Sum_probs=173.7

Q ss_pred             CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----EEEeecCCC------------CCeEEEEEccCCC--EEEE
Q psy17188        202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----LVRQFQGHT------------DGASCIDISADGT--KLWT  262 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~h~------------~~v~~~~~~~~~~--~l~s  262 (504)
                      ...-|.++.|...|.+|++|..+|.|.++.-....     ....++.|.            ..|..+.|.++++  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            34568899999999999999999999999744322     233444443            4678889988654  6777


Q ss_pred             EcCCCeEEEEECCCCceEE--EeecCCCCCCC-------------------cccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        263 GGLDNTVRSWDLREGCVKV--WDISQPGSKTP-------------------VSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~--~~~~~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      .+.|.+|++|.+.....+.  ++.........                   ........|...|.++.++.|+..++++ 
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-  182 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-  182 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence            8889999999987654332  11111110000                   0112223567789999999999988887 


Q ss_pred             CCCcEEEEeCCCCCccc-eeeec-----cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC----ccccc--
Q psy17188        322 EASNLSIWDLASPTPRI-KAELT-----SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT----PVSQL--  389 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~-~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~----~~~~~--  389 (504)
                      .|=.|.+|+++-..... +..++     .-..-|++..|+|.... +++-.+..|+|++-|++....-.    .+...  
T Consensus       183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn-~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped  261 (433)
T KOG1354|consen  183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCN-VFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED  261 (433)
T ss_pred             cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHcc-EEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence            56789999886543211 11111     12235778888888766 67777789999999998532110    00000  


Q ss_pred             -----ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-CcceeecccCC----------CCc---eeEEEECCC
Q psy17188        390 -----DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-TPRIKAELTSS----------APA---CYALAISPD  450 (504)
Q Consensus       390 -----~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~----------~~~---v~~l~~s~~  450 (504)
                           -...--..|..+.|+++|+++++-. --+|++||+... ++......+..          ...   -..++|+.+
T Consensus       262 p~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~  340 (433)
T KOG1354|consen  262 PSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGN  340 (433)
T ss_pred             CcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCC
Confidence                 0011224588999999999999853 367999999543 33322222111          111   235799999


Q ss_pred             CCEEEEeeCCCcEEEEEcCCc
Q psy17188        451 SKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       451 ~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +.++++|+....+++|++..|
T Consensus       341 ~~~v~TGsy~n~frvf~~~~g  361 (433)
T KOG1354|consen  341 DSYVMTGSYNNVFRVFNLARG  361 (433)
T ss_pred             cceEecccccceEEEecCCCC
Confidence            999999999999999996544

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.57  E-value=7.4e-13  Score=126.40  Aligned_cols=194  Identities=17%  Similarity=0.159  Sum_probs=133.2

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCC--cE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS--NL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg--~i  183 (504)
                      .+...+...+|+|||++|+...    ...|++||+.++..    ..+.  .+.+.+.+++|+||++.|+.. +.++  .|
T Consensus       187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~----~~~~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~i  260 (417)
T TIGR02800       187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR----EKVA--SFPGMNGAPAFSPDGSKLAVSLSKDGNPDI  260 (417)
T ss_pred             cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE----EEee--cCCCCccceEECCCCCEEEEEECCCCCccE
Confidence            5667789999999999998765    25799999987532    1111  344566789999999988754 3333  58


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-C--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      ++|++.+++.   ..+..+........|+||++.|+..+.. +  .|+++|+.+++.. .+..+...+....|+|++++|
T Consensus       261 ~~~d~~~~~~---~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i  336 (417)
T TIGR02800       261 YVMDLDGKQL---TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLI  336 (417)
T ss_pred             EEEECCCCCE---EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEE
Confidence            8899886543   2333344445567899999988766543 3  5888888877643 344455667788999999999


Q ss_pred             EEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---cEEEEeC
Q psy17188        261 WTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDL  331 (504)
Q Consensus       261 ~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~v~d~  331 (504)
                      +.++.++   .|.+||+.++..+..              .   .........|+|+++.|+..+.++   .+.+.+.
T Consensus       337 ~~~~~~~~~~~i~~~d~~~~~~~~l--------------~---~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~  396 (417)
T TIGR02800       337 AFVHREGGGFNIAVMDLDGGGERVL--------------T---DTGLDESPSFAPNGRMILYATTRGGRGVLGLVST  396 (417)
T ss_pred             EEEEccCCceEEEEEeCCCCCeEEc--------------c---CCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence            9888776   789999887654321              1   011223457999999888876654   3444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.57  E-value=3.7e-13  Score=129.49  Aligned_cols=244  Identities=18%  Similarity=0.270  Sum_probs=172.4

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeec-CC----------------------------------
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL-QR----------------------------------  158 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~----------------------------------  158 (504)
                      +++.+..+-.  ++|.++....|.+||+..+.....+..+... .|                                  
T Consensus         8 ~~l~~~~~~~--~~llag~gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l~~~~~v~~~~~~~v~~~~~~~~~~~~   85 (967)
T KOG0974|consen    8 GPLNLPQLVS--DYLLAGSGPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKLLSGKIVTCAKSDEVYVKEASNQIIER   85 (967)
T ss_pred             ccccchhhcc--ceeeecCCCceEEeeCCchhHhhhhhhhcccccccccccceeccceEEEEEeecceeecchhhhhhhh
Confidence            3444444443  6788787778899998776433322221111 01                                  


Q ss_pred             -CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCc----eEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        159 -DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA----CYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       159 -~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                       .+.|....+..+.+.++.++.+..+.+||......  ..........    ..-+-++++.-++++|+.-+.|.+|+..
T Consensus        86 ~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~--~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~  163 (967)
T KOG0974|consen   86 FSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSV--LSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPH  163 (967)
T ss_pred             ccccccccchhhhcceEEEEEcCceEEEEecccCce--ehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecc
Confidence             12233333344566788888889999999875432  1222211111    1123346666689999999999999988


Q ss_pred             CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      ..+.-..+.+|.+.|.++.++.||+++++.|.|.++|+|++++.+..              .....+|...+..+.+.|+
T Consensus       164 ~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~--------------~~~~fgHsaRvw~~~~~~n  229 (967)
T KOG0974|consen  164 EDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVL--------------GCTGFGHSARVWACCFLPN  229 (967)
T ss_pred             ccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeeccccccc--------------CcccccccceeEEEEeccc
Confidence            54444468899999999999999999999999999999999998742              2356789999999999998


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccC-CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                        .+++++.|-+.++|+.+..+..   .+..| ...+..++..++..  ..++++.|+.+++||+.....
T Consensus       230 --~i~t~gedctcrvW~~~~~~l~---~y~~h~g~~iw~~~~~~~~~--~~vT~g~Ds~lk~~~l~~r~~  292 (967)
T KOG0974|consen  230 --RIITVGEDCTCRVWGVNGTQLE---VYDEHSGKGIWKIAVPIGVI--IKVTGGNDSTLKLWDLNGRGL  292 (967)
T ss_pred             --eeEEeccceEEEEEecccceeh---hhhhhhhcceeEEEEcCCce--EEEeeccCcchhhhhhhcccc
Confidence              8999999999999976654322   33333 34678888888776  899999999999999876543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=5.6e-12  Score=118.74  Aligned_cols=245  Identities=12%  Similarity=0.051  Sum_probs=146.4

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE--E-EEEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK--L-WTGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l-~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      ..|.+.|.+.+.. +.+......+..-.|+|||+.  + ++...+|  .|.+.++.+++.+.                ..
T Consensus       165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~----------------lt  227 (428)
T PRK01029        165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK----------------IL  227 (428)
T ss_pred             ceEEEEcCCCCCc-eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE----------------ee
Confidence            3577777765544 334445566778899999975  2 2444443  57788888776321                12


Q ss_pred             ccCCceEEEEEcCCCCEEEEEeC-CC----cEEEEeCCCCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGGE-AS----NLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~v~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .........+|+|||+.|+..+. +|    .+..|++..+.. ................+|+||++.+++.+ ..++..+
T Consensus       228 ~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s-~~~g~~~  306 (428)
T PRK01029        228 ALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVS-NKDGRPR  306 (428)
T ss_pred             cCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEE-CCCCCce
Confidence            22333456899999998887653 23    234466654321 11112222223446789999999644433 3455555


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      +|.+...........+.  .....+....|+|||++|+....+   ..|++||+.+++.......   ...+....|+||
T Consensus       307 ly~~~~~~~g~~~~~lt--~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~---~~~~~~p~wSpD  381 (428)
T PRK01029        307 IYIMQIDPEGQSPRLLT--KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS---PENKESPSWAID  381 (428)
T ss_pred             EEEEECcccccceEEec--cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC---CCCccceEECCC
Confidence            55443211111111111  223455688999999998876543   3599999988765433322   234566799999


Q ss_pred             CCEEEEeeC---CCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188        451 SKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  493 (504)
Q Consensus       451 ~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~  493 (504)
                      |++|+....   ...|+++|+.+++..... ...+.+...+|+|-.
T Consensus       382 G~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        382 SLHLVYSAGNSNESELYLISLITKKTRKIV-IGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCcccCceecCCC
Confidence            998875443   356889999887754433 345567788898743

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.54  E-value=1.4e-11  Score=115.66  Aligned_cols=300  Identities=13%  Similarity=0.104  Sum_probs=181.1

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      .+..+++++.++.|..+|..+++......+....  ......  ++..+++++.++.+..+|.++|+.+...... +.+.
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~--~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~  138 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERL--SGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVL  138 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCc--ccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceee
Confidence            3667888888999999999888765444443321  112222  4667888889999999999999988776532 2222


Q ss_pred             EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                      +.-.. .+..++.++.++.|..||.++|+. +|+.......     .......    +....  +..++++..++.+..+
T Consensus       139 ~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~-~W~~~~~~~~-----~~~~~~~----sp~~~--~~~v~~~~~~g~v~al  205 (377)
T TIGR03300       139 SPPLV-ANGLVVVRTNDGRLTALDAATGER-LWTYSRVTPA-----LTLRGSA----SPVIA--DGGVLVGFAGGKLVAL  205 (377)
T ss_pred             cCCEE-ECCEEEEECCCCeEEEEEcCCCce-eeEEccCCCc-----eeecCCC----CCEEE--CCEEEEECCCCEEEEE
Confidence            21111 245777788899999999999874 4543322110     0000000    11111  2467778888999999


Q ss_pred             eCCCCCccceeeeccCCC--c---eeeEEECC--CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEE
Q psy17188        330 DLASPTPRIKAELTSSAP--A---CYALAISP--DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  402 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~--~---i~~~~~~~--~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~  402 (504)
                      |.++++............  .   ...+.-+|  .+.  .+...+.++.+..+|..+++..-...   .   . ......
T Consensus       206 d~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~--~vy~~~~~g~l~a~d~~tG~~~W~~~---~---~-~~~~p~  276 (377)
T TIGR03300       206 DLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGG--QVYAVSYQGRVAALDLRSGRVLWKRD---A---S-SYQGPA  276 (377)
T ss_pred             EccCCCEeeeeccccCCCCCchhhhhccCCccEEECC--EEEEEEcCCEEEEEECCCCcEEEeec---c---C-CccCce
Confidence            998876443332211100  0   00000011  122  45566678999999987654322111   0   0 111122


Q ss_pred             EcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecC
Q psy17188        403 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       403 ~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~  481 (504)
                        .++..+++++.+|.++.+|..+++.+.... ....  .......  .+..|++++.+|.++++|..+|+.+.+++.+.
T Consensus       277 --~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~--~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~  350 (377)
T TIGR03300       277 --VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR--QLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG  350 (377)
T ss_pred             --EeCCEEEEECCCCeEEEEECCCCcEEEccccccCC--ccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence              246678888899999999999887655442 2111  1111122  46788999999999999999999999888666


Q ss_pred             CceE-EEEEccCCCEEEEecCCCC
Q psy17188        482 DGAS-CIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       482 ~~v~-~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+. ...+. + +.|+.++.||.
T Consensus       351 ~~~~~sp~~~-~-~~l~v~~~dG~  372 (377)
T TIGR03300       351 SGIASPPVVV-G-DGLLVQTRDGD  372 (377)
T ss_pred             CccccCCEEE-C-CEEEEEeCCce
Confidence            5433 23333 3 35888888873

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=3.8e-12  Score=121.53  Aligned_cols=217  Identities=17%  Similarity=0.160  Sum_probs=139.1

Q ss_pred             ecCCCcEEEEEEcCCCcEEEEec--C--CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCC--c
Q psy17188        110 LSHGEVVCAVTISNPTKYVYTGG--K--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS--N  182 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~~l~~~~--d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg--~  182 (504)
                      ..+.+.+....|+|||+.|+..+  +  ..|.+|+++++... .   +.  ...+.+...+|+|||+.|+.. ..++  .
T Consensus       195 ~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~---l~--~~~g~~~~~~~SpDG~~la~~~~~~g~~~  268 (430)
T PRK00178        195 LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-Q---IT--NFEGLNGAPAWSPDGSKLAFVLSKDGNPE  268 (430)
T ss_pred             ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-E---cc--CCCCCcCCeEECCCCCEEEEEEccCCCce
Confidence            36778899999999999888655  2  46899999875321 1   11  223445678999999988754 3444  5


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CC--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DG--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                      |++||+.+++.   ..+..+........|+||++.|+..+. ++  .|+++|+.+++...... .........|+||++.
T Consensus       269 Iy~~d~~~~~~---~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~  344 (430)
T PRK00178        269 IYVMDLASRQL---SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-VGNYNARPRLSADGKT  344 (430)
T ss_pred             EEEEECCCCCe---EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCCccceEECCCCCE
Confidence            88889987653   234444445667899999998776654 33  57788888776443322 2223345789999999


Q ss_pred             EEEEcCC-C--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-C--cEEEEeCCC
Q psy17188        260 LWTGGLD-N--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-S--NLSIWDLAS  333 (504)
Q Consensus       260 l~s~~~d-g--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~v~d~~~  333 (504)
                      |+..+.+ +  .|.++|+.+++.+..              ...   .......|+|+|+.++..+.+ +  .+.++++..
T Consensus       345 i~~~~~~~~~~~l~~~dl~tg~~~~l--------------t~~---~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g  407 (430)
T PRK00178        345 LVMVHRQDGNFHVAAQDLQRGSVRIL--------------TDT---SLDESPSVAPNGTMLIYATRQQGRGVLMLVSING  407 (430)
T ss_pred             EEEEEccCCceEEEEEECCCCCEEEc--------------cCC---CCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence            8876643 3  588899988765422              111   111245799999998877654 2  466667653


Q ss_pred             CCccceeeeccCCCceeeEEECC
Q psy17188        334 PTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       334 ~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                      ..   ...+......+...+|+|
T Consensus       408 ~~---~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        408 RV---RLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             Cc---eEECcCCCCCcCCCccCC
Confidence            32   222323334455566665

>KOG4547|consensus

Probab=99.54  E-value=2.9e-12  Score=116.10  Aligned_cols=192  Identities=13%  Similarity=0.221  Sum_probs=152.0

Q ss_pred             CCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEc--------------------cCCCEEEEecCCC
Q psy17188        123 NPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL--------------------PDGRTLIVGGEAS  181 (504)
Q Consensus       123 ~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--------------------~~~~~l~~~~~dg  181 (504)
                      |...++|... ||.+++|+...+.....+....  .-.+..++..|.                    .|...|+-|...|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~--~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g   80 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA--SLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG   80 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccch--hccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence            4456777666 9999999998865444443322  223444444442                    2344678888899


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW  261 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  261 (504)
                      .|.+|++..++......-..|.+.|.++.++.+-..|.+++.|+.+..|+..+.+.++.++.....+.+++++||+..++
T Consensus        81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~  160 (541)
T KOG4547|consen   81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILL  160 (541)
T ss_pred             cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEE
Confidence            99999999888766666678999999999999989999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-----CCEEEEEe-CCCcEEEEeCCC
Q psy17188        262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-----GRTLIVGG-EASNLSIWDLAS  333 (504)
Q Consensus       262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~-~dg~i~v~d~~~  333 (504)
                      +++  ++|++||++++++               ...+.+|.++|+++.|..+     |.+++++. .+.-+.+|-+..
T Consensus       161 ~as--~~ik~~~~~~kev---------------v~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  161 TAS--RQIKVLDIETKEV---------------VITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             ecc--ceEEEEEccCceE---------------EEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            987  6899999999987               5667789999999999876     66766643 344566776544

>KOG2041|consensus

Probab=99.54  E-value=1.6e-12  Score=120.16  Aligned_cols=290  Identities=12%  Similarity=0.161  Sum_probs=200.7

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-------------cceeeeecCcCceEEEEECCCCCEEEEEeC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------------RIKAELTSSAPACYALAISPDSKVCFSCCS  223 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  223 (504)
                      +......|++|+....++|+|+.||.+++..+.+...             .....+.+|...|.-+.|+.+.+.|-+...
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            3456788999999999999999999999998875432             123567899999999999999999999999


Q ss_pred             CCcEEEEECCCCeEEEeec--CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        224 DGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      +|.|.+|-+-.+.-...+.  ...+.|.+++|+.||..+.....||.|.+=.++..++  |...              -.
T Consensus        92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRI--wgKe--------------Lk  155 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRI--WGKE--------------LK  155 (1189)
T ss_pred             CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecccee--cchh--------------cc
Confidence            9999999998876544332  2456789999999999999999999998888776542  2211              11


Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE-ECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA-ISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      ......+.|++|.+.++.+-.+|.+++||.+..-   ...+.... .|..-. ++.-+.  .++.       .-|.... 
T Consensus       156 g~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF---~~Kl~~~c-~Vn~tg~~s~~~~--kia~-------i~w~~g~-  221 (1189)
T KOG2041|consen  156 GQLLAHVLWSEDLEQALFKKANGETHLYDNQGNF---ERKLEKDC-EVNGTGIFSNFPT--KIAE-------IEWNTGP-  221 (1189)
T ss_pred             hheccceeecccHHHHHhhhcCCcEEEecccccH---HHhhhhce-EEeeeeeecCCCc--cccc-------eeeccCc-
Confidence            1224578899999999999999999999976431   11111100 011000 000000  0000       0011000 


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                                         -.-.-||...|+++-.+|.+.|..-.+.........   .-.+....|+++|..||.++.+
T Consensus       222 -------------------~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dt---gm~~vgakWnh~G~vLAvcG~~  279 (1189)
T KOG2041|consen  222 -------------------YQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDT---GMKIVGAKWNHNGAVLAVCGND  279 (1189)
T ss_pred             -------------------cccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEec---ccEeecceecCCCcEEEEccCc
Confidence                               112235788899999999998876654433322222   2457788999999999998864


Q ss_pred             C---------cEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        461 G---------NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       461 g---------~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      .         .|.+|. .-|+.+.+++.....|++++|-..|-.++.+
T Consensus       280 ~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLriA~A  326 (1189)
T KOG2041|consen  280 SDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRIAIA  326 (1189)
T ss_pred             ccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCCceEEEEE
Confidence            2         466665 4578888898888899999998887766654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.53  E-value=1e-10  Score=104.63  Aligned_cols=256  Identities=14%  Similarity=0.144  Sum_probs=152.2

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC----------CCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL----------DNTVRSWDLREGCVKVWDISQPGSKTPVS  294 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~  294 (504)
                      ++|.+.|..+++.+..+..-..+- .+ ++||++.|+.+..          +..|.+||..+.+... ++..+..     
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~-~i~~p~~-----   98 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIA-DIELPEG-----   98 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEe-EEccCCC-----
Confidence            889999999999998887543333 34 9999998877655          7899999999987431 1111100     


Q ss_pred             cceecccCCceEEEEEcCCCCEEEEEe-C-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeE
Q psy17188        295 QLDCLQRDNYIRSVKLLPDGRTLIVGG-E-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV  372 (504)
Q Consensus       295 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i  372 (504)
                        ...........++++|||++|++.. . +..+.+.|+.+.+.........   ...-...+++.    +...+.|+..
T Consensus        99 --p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~---~~~vy~t~e~~----~~~~~~Dg~~  169 (352)
T TIGR02658        99 --PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD---CYHIFPTANDT----FFMHCRDGSL  169 (352)
T ss_pred             --chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC---CcEEEEecCCc----cEEEeecCce
Confidence              0001123345789999999999876 3 6889999999875433333311   11111111111    1112233333


Q ss_pred             EEEecCCCCCCCcccccccccC-CCce-EEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCccee-----eccc-----CCC
Q psy17188        373 KVWDISQPGSKTPVSQLDCLQR-DNYI-RSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIK-----AELT-----SSA  439 (504)
Q Consensus       373 ~i~d~~~~~~~~~~~~~~~~~~-~~~i-~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~~-----~~~~-----~~~  439 (504)
                      ....+...+... ......... ..++ ..-.|++ +|+++++..+ |.|++.|+........     ....     -..
T Consensus       170 ~~v~~d~~g~~~-~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP  247 (352)
T TIGR02658       170 AKVGYGTKGNPK-IKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRP  247 (352)
T ss_pred             EEEEecCCCceE-EeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCC
Confidence            333332221100 000000000 0000 0013455 8888888776 9999999654322211     1111     112


Q ss_pred             CceeEEEECCCCCEEEEeeC----------CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC-EEEEec
Q psy17188        440 PACYALAISPDSKVCFSCCS----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGG  500 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~s~s  500 (504)
                      ....-++++++++.+++...          .+.|.++|..+++.+..+.. ...+..++++||++ +|++..
T Consensus       248 ~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn  318 (352)
T TIGR02658       248 GGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALS  318 (352)
T ss_pred             CcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeC
Confidence            23334799999999887532          24799999999999998874 45799999999999 877665

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=4.6e-12  Score=119.29  Aligned_cols=221  Identities=13%  Similarity=0.073  Sum_probs=135.2

Q ss_pred             CCCcEEEEEEcCCCcE--E-EEec-C--CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-CC---
Q psy17188        112 HGEVVCAVTISNPTKY--V-YTGG-K--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-AS---  181 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~--l-~~~~-d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg---  181 (504)
                      ..+.+..-+|||||+.  + .++. +  ..|.+.++.+++. ..+.     ...+.....+|+|||+.|+..+. +|   
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-~~lt-----~~~g~~~~p~wSPDG~~Laf~s~~~g~~d  256 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-KKIL-----ALQGNQLMPTFSPRKKLLAFISDRYGNPD  256 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-eEee-----cCCCCccceEECCCCCEEEEEECCCCCcc
Confidence            4455677899999874  2 2333 3  4677778876532 2222     22344557899999999987653 22   


Q ss_pred             -cEEEEeCCCCCc-cceeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEE--ECCC-CeEEEeecCCCCCeEEEEEcc
Q psy17188        182 -NLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVW--DLHN-QTLVRQFQGHTDGASCIDISA  255 (504)
Q Consensus       182 -~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw--d~~~-~~~~~~~~~h~~~v~~~~~~~  255 (504)
                       .+.+|++..+.. ................+|+|||+.|+..+ .+|...+|  ++.. +.....+..+...+....|+|
T Consensus       257 i~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSP  336 (428)
T PRK01029        257 LFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSP  336 (428)
T ss_pred             eeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECC
Confidence             244467664321 11222222223346789999999877665 45654555  5442 333444554556678899999


Q ss_pred             CCCEEEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---CCcEEEE
Q psy17188        256 DGTKLWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIW  329 (504)
Q Consensus       256 ~~~~l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~  329 (504)
                      ||+.|+..+.+   ..|.+||+.+++.+..                ......+....|+|||+.|+....   ...|+++
T Consensus       337 DG~~Laf~~~~~g~~~I~v~dl~~g~~~~L----------------t~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v  400 (428)
T PRK01029        337 DGKKIAFCSVIKGVRQICVYDLATGRDYQL----------------TTSPENKESPSWAIDSLHLVYSAGNSNESELYLI  400 (428)
T ss_pred             CCCEEEEEEcCCCCcEEEEEECCCCCeEEc----------------cCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence            99988876543   3799999998875321                111234567899999998876543   3468888


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCC
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPD  357 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~  357 (504)
                      |+..++.....   .....+...+|+|-
T Consensus       401 dl~~g~~~~Lt---~~~g~~~~p~Ws~~  425 (428)
T PRK01029        401 SLITKKTRKIV---IGSGEKRFPSWGAF  425 (428)
T ss_pred             ECCCCCEEEee---cCCCcccCceecCC
Confidence            88776433222   23334566777764

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=8e-12  Score=118.71  Aligned_cols=213  Identities=19%  Similarity=0.218  Sum_probs=133.1

Q ss_pred             eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC---CcEEEEeCCCCCccceeeeecCcCceEEEEE
Q psy17188        135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAI  211 (504)
Q Consensus       135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  211 (504)
                      .|.++|.+..+. ..+     ......+.+..|+|||+.|+..+.+   ..|++||+.+++........   .......|
T Consensus       199 ~l~i~d~dG~~~-~~l-----~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~w  269 (448)
T PRK04792        199 QLMIADYDGYNE-QML-----LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRF  269 (448)
T ss_pred             EEEEEeCCCCCc-eEe-----ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeE
Confidence            577777655322 111     1456778899999999999887542   35889999876643332222   23456899


Q ss_pred             CCCCCEEEE-EeCCCc--EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CC--eEEEEECCCCceEEEeec
Q psy17188        212 SPDSKVCFS-CCSDGN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DN--TVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       212 s~~~~~l~~-~~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg--~i~~wd~~~~~~~~~~~~  285 (504)
                      +|||+.|+. .+.++.  |+++|+.+++.. .+..+.......+|+||++.|+..+. ++  .|.++|+.+++....   
T Consensus       270 SPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L---  345 (448)
T PRK04792        270 SPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL---  345 (448)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE---
Confidence            999997765 455664  888898877654 44445556678899999998876553 33  577778877764321   


Q ss_pred             CCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-C--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-S--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                                 ..  ........+|+|||++|+..+.+ +  .|.++|+.+++....   ... .......|+|+++.++
T Consensus       346 -----------t~--~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~l---t~~-~~d~~ps~spdG~~I~  408 (448)
T PRK04792        346 -----------TF--EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVL---TST-RLDESPSVAPNGTMVI  408 (448)
T ss_pred             -----------ec--CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEc---cCC-CCCCCceECCCCCEEE
Confidence                       11  11123356899999998876553 3  456677776643222   111 1223458999999744


Q ss_pred             eeeccCCC--eEEEEecC
Q psy17188        363 FSSHHYKS--CVKVWDIS  378 (504)
Q Consensus       363 ~~~~~~~~--~i~i~d~~  378 (504)
                      +.+. .++  .+.+++.+
T Consensus       409 ~~~~-~~g~~~l~~~~~~  425 (448)
T PRK04792        409 YSTT-YQGKQVLAAVSID  425 (448)
T ss_pred             EEEe-cCCceEEEEEECC
Confidence            4443 333  35566653

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.52  E-value=6.4e-11  Score=104.57  Aligned_cols=172  Identities=16%  Similarity=0.162  Sum_probs=135.6

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC-cEEEEeCCCCCccceeeeecC
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKAELTSS  202 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~~  202 (504)
                      +|.+++.-+.|...|.+...+   ..++    .++.+.|.-..+.-+++-++.|..|| .+-|+|..+++   .......
T Consensus       331 ~Gd~ia~VSRGkaFi~~~~~~---~~iq----v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e---~kr~e~~  400 (668)
T COG4946         331 NGDYIALVSRGKAFIMRPWDG---YSIQ----VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE---VKRIEKD  400 (668)
T ss_pred             CCcEEEEEecCcEEEECCCCC---eeEE----cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce---EEEeeCC
Confidence            688999989888888876543   1122    16788899999999999999999999 89999998876   3445556


Q ss_pred             cCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC----eEEEEECCCCc
Q psy17188        203 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN----TVRSWDLREGC  278 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg----~i~~wd~~~~~  278 (504)
                      -+.|.++..+++|++++++.....|.+.|+++++....-+...+-|+.+.|+|+++++|-+--+|    .|+++|+.+++
T Consensus       401 lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K  480 (668)
T COG4946         401 LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK  480 (668)
T ss_pred             ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence            67799999999999999998889999999999987666666778899999999999999876665    68999999987


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      +.  +              .......=.+-+|.|++++|..-+
T Consensus       481 iy--~--------------vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         481 IY--D--------------VTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             EE--E--------------ecCCcccccCcccCCCCcEEEEEe
Confidence            42  1              122222234567899999887654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.51  E-value=1.9e-10  Score=101.63  Aligned_cols=226  Identities=13%  Similarity=0.163  Sum_probs=161.4

Q ss_pred             EEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCC---C---CceEEEE-Ecc-CCCEEEEecCCCcEEEEeC
Q psy17188        117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQR---D---NYIRSVK-LLP-DGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~---~---~~v~~~~-~s~-~~~~l~~~~~dg~i~iw~~  188 (504)
                      .+=..+.||+.++....|.|.+||.++....+.--.+.....   .   .+..-+. |++ +|++++..+. |+..|.+.
T Consensus       270 Y~R~~nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~  348 (668)
T COG4946         270 YPRNANSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRP  348 (668)
T ss_pred             cccccCCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECC
Confidence            344456799999998899999999887533221111111100   0   1111112 444 7889988874 77888776


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC-cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                      ..+-    ...-++...|.-..+..+++-++.|..|| .+-|+|.++++.. .+...-+.|.++..+++|+.++.+....
T Consensus       349 ~~~~----~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaNdr~  423 (668)
T COG4946         349 WDGY----SIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVANDRF  423 (668)
T ss_pred             CCCe----eEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEcCce
Confidence            5432    22235666688888888888899999999 8999999887754 4555778899999999999999999889


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC----cEEEEeCCCCCccceeeec
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----NLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~~~~~~~~  343 (504)
                      .|.+.|++++.+++.+               ....+-|+.+.|+|++++++.+--+|    .|+++|+..++.   ....
T Consensus       424 el~vididngnv~~id---------------kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki---y~vT  485 (668)
T COG4946         424 ELWVIDIDNGNVRLID---------------KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI---YDVT  485 (668)
T ss_pred             EEEEEEecCCCeeEec---------------ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE---EEec
Confidence            9999999999875432               33456699999999999999886655    599999987642   2233


Q ss_pred             cCCCceeeEEECCCCCCceeeec
Q psy17188        344 SSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                      .....-.+-+|.|+++.+++++.
T Consensus       486 T~ta~DfsPaFD~d~ryLYfLs~  508 (668)
T COG4946         486 TPTAYDFSPAFDPDGRYLYFLSA  508 (668)
T ss_pred             CCcccccCcccCCCCcEEEEEec
Confidence            33334567789999998777765

>KOG4547|consensus

Probab=99.51  E-value=9.6e-12  Score=112.80  Aligned_cols=196  Identities=16%  Similarity=0.231  Sum_probs=151.5

Q ss_pred             cCCCEEEEecCCCcEEEEeCCCCCccceeeeecC-cCceEEEEE--------------------CCCCCEEEEEeCCCcE
Q psy17188        169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAI--------------------SPDSKVCFSCCSDGNI  227 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~--------------------s~~~~~l~~~~~dg~i  227 (504)
                      |...++|....||.+++|+...++.........+ .+..++..|                    +.+...++-|...|.|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            4567899999999999999987764333322222 333455554                    1234478888899999


Q ss_pred             EEEECCCCeEEEeec--CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce
Q psy17188        228 AVWDLHNQTLVRQFQ--GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI  305 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  305 (504)
                      .+|++..++....+.  .|.+.|.++.++.+-..|.+++.|+.+..|+...+...               .........+
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~---------------~~~~~~~~~~  147 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVII---------------RIWKEQKPLV  147 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceee---------------eeeccCCCcc
Confidence            999999999888886  59999999999998889999999999999999988752               2223344557


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC-----CCCceeeeccCCCeEEEEecCCC
Q psy17188        306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-----SKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       306 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .+++++|||..+++++  ++|++||+++.  .....+.+|.+++.++.|.-+     |.+ ++.+...+..+.+|-++..
T Consensus       148 ~sl~is~D~~~l~~as--~~ik~~~~~~k--evv~~ftgh~s~v~t~~f~~~~~g~~G~~-vLssa~~~r~i~~w~v~~~  222 (541)
T KOG4547|consen  148 SSLCISPDGKILLTAS--RQIKVLDIETK--EVVITFTGHGSPVRTLSFTTLIDGIIGKY-VLSSAAAERGITVWVVEKE  222 (541)
T ss_pred             ceEEEcCCCCEEEecc--ceEEEEEccCc--eEEEEecCCCcceEEEEEEEeccccccce-eeeccccccceeEEEEEcc
Confidence            8999999999999986  58999999987  677889999999999999776     443 5666667778888887764


Q ss_pred             CCCC
Q psy17188        381 GSKT  384 (504)
Q Consensus       381 ~~~~  384 (504)
                      ...+
T Consensus       223 ~kkk  226 (541)
T KOG4547|consen  223 DKKK  226 (541)
T ss_pred             cccc
Confidence            4333

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.50  E-value=1.5e-09  Score=110.75  Aligned_cols=380  Identities=14%  Similarity=0.139  Sum_probs=227.3

Q ss_pred             CCCcceEEEECCCCCcccCCCCCCcccCCC--CCccccceeeec-CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCC--
Q psy17188         70 GGKPAYSYHVTTDGQMQPVPFPPDALIGPG--IPRHARQINTLS-HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQ--  143 (504)
Q Consensus        70 ~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~--  143 (504)
                      ....+..+.+-++...+.+.+.++.++...  .......+...| -+..|.|++||||+.+|+... ++++.+-+.+-  
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~  153 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDP  153 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceE
Confidence            457899999999988888888777766552  233344455554 578999999999999998766 77877654210  


Q ss_pred             ---------------------CCCCCcee--------------e------eeecCCCCceEEEEEccCCCEEEEecC---
Q psy17188        144 ---------------------PGSKTPVS--------------Q------LDCLQRDNYIRSVKLLPDGRTLIVGGE---  179 (504)
Q Consensus       144 ---------------------~~~~~~~~--------------~------~~~~~~~~~v~~~~~s~~~~~l~~~~~---  179 (504)
                                           |+..+.++              .      -... .+..-..++|-.||.++|+.+.   
T Consensus       154 i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~  232 (928)
T PF04762_consen  154 ISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPE  232 (928)
T ss_pred             EEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcC
Confidence                                 00001100              0      0001 3345668999999999998763   


Q ss_pred             C---CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEeec----CCCCCeE
Q psy17188        180 A---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQ----GHTDGAS  249 (504)
Q Consensus       180 d---g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~----~h~~~v~  249 (504)
                      .   ..++||+-+ +..  ...-..-.+--.+++|.|.|+++|+...   ...|.+|. ++|-....|.    .....|.
T Consensus       233 ~~~~R~iRVy~Re-G~L--~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~  308 (928)
T PF04762_consen  233 TGSRRVIRVYSRE-GEL--QSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVI  308 (928)
T ss_pred             CCceeEEEEECCC-ceE--EeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceee
Confidence            2   569999854 221  1111111222346899999999998764   34577777 4554333332    3456899


Q ss_pred             EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEE
Q psy17188        250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSI  328 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v  328 (504)
                      .+.|++|+..|+..-.|. |.+|-..+-...+..           .+. ......+..+.|+|. ...|.+.+.+|.+..
T Consensus       309 ~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKq-----------ei~-~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~  375 (928)
T PF04762_consen  309 ELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQ-----------EIR-FSSSESVNFVKWDPEKPLRLHVLTSNGQYEI  375 (928)
T ss_pred             EEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEE-----------EEE-ccCCCCCCceEECCCCCCEEEEEecCCcEEE
Confidence            999999999999877665 999998876543211           111 112222344777773 344555555555544


Q ss_pred             EeC-------------------------------CCCC---ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        329 WDL-------------------------------ASPT---PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       329 ~d~-------------------------------~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      +++                               +...   +.....+ .-...|..++|+++..  .+++-..|+.+.+
T Consensus       376 ~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~--~~avl~~d~~l~~  452 (928)
T PF04762_consen  376 YDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNS--RFAVLTSDGSLSI  452 (928)
T ss_pred             EEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCC--eEEEEECCCCEEE
Confidence            332                               1100   0001111 2245789999999987  4777778999999


Q ss_pred             EecCCCCCCC---c--cccc--------ccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCc-ceeecccC
Q psy17188        375 WDISQPGSKT---P--VSQL--------DCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTP-RIKAELTS  437 (504)
Q Consensus       375 ~d~~~~~~~~---~--~~~~--------~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~-~~~~~~~~  437 (504)
                      |.........   +  ....        ........+..++|..+...++....+   ..+.++++...+. ........
T Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  532 (928)
T PF04762_consen  453 YEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTE  532 (928)
T ss_pred             EEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEec
Confidence            8865432210   0  0011        111234567889998888777766554   5688888754332 22222333


Q ss_pred             CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        438 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       438 ~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ....+..+...++...++.-..+|.+...+...
T Consensus       533 ~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~  565 (928)
T PF04762_consen  533 VDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDG  565 (928)
T ss_pred             cCceEEEEeeCCCCcEEEEEECCCEEEEeecCC
Confidence            344455555565555566677788888665543

>KOG0280|consensus

Probab=99.50  E-value=3.2e-12  Score=105.67  Aligned_cols=208  Identities=15%  Similarity=0.171  Sum_probs=143.3

Q ss_pred             CcEEEEEEcC---CCc-EEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCC-ceEEEEEccCCCEEEEecCCCcEEEEe
Q psy17188        114 EVVCAVTISN---PTK-YVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       114 ~~V~~v~~s~---~~~-~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~  187 (504)
                      ..+..+.|..   +|. .++-.. +|.|.++..+.......+..+....-.. ...++.|++.+..++++..+|.+.+-+
T Consensus        70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~  149 (339)
T KOG0280|consen   70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY  149 (339)
T ss_pred             cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence            3445555552   444 233333 8999999876544333333332222111 256788999999999999999999766


Q ss_pred             CCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECC-CCeEEEe-ecCCCCCeEEEEEcc-CCCEEEEE
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH-NQTLVRQ-FQGHTDGASCIDISA-DGTKLWTG  263 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~-~~~h~~~v~~~~~~~-~~~~l~s~  263 (504)
                      ......+....++.|+-+++...|+. +.+++++|+.|+.+..||++ .++.+.. .+.|...|.+|.-+| .+.+|++|
T Consensus       150 ~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TG  229 (339)
T KOG0280|consen  150 ETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATG  229 (339)
T ss_pred             cceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEe
Confidence            66555444567889999999999986 44589999999999999999 4455544 556999999999887 67799999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      +.|-.|++||.++-.-               .+......+.|..+.++|.  ++.|+++..+| .++.+.+.....
T Consensus       230 sYDe~i~~~DtRnm~k---------------Pl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e  289 (339)
T KOG0280|consen  230 SYDECIRVLDTRNMGK---------------PLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLE  289 (339)
T ss_pred             ccccceeeeehhcccC---------------ccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccc
Confidence            9999999999995331               2333334578999999994  33444444443 667776655433

>KOG1912|consensus

Probab=99.47  E-value=9.4e-11  Score=109.65  Aligned_cols=410  Identities=15%  Similarity=0.145  Sum_probs=241.0

Q ss_pred             cCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCC-----------C-cEEEEe
Q psy17188         65 LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNP-----------T-KYVYTG  131 (504)
Q Consensus        65 ~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~-----------~-~~l~~~  131 (504)
                      +.|.....+..+.+|+|.| +++.+...-..+.  .....+.++.+ -|...|+.+.|.|-           . -+||++
T Consensus         9 lpG~l~~sN~~A~Dw~~~G-LiAygshslV~VV--Ds~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsa   85 (1062)
T KOG1912|consen    9 LPGPLSRSNRNAADWSPSG-LIAYGSHSLVSVV--DSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASA   85 (1062)
T ss_pred             CCCCCCcccccccccCccc-eEEEecCceEEEE--ehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEec
Confidence            3344444456677888888 5555555433332  23456777777 68899999999862           1 255666


Q ss_pred             c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc---CC-CEEEEecCCCcEEEEeCCCCCccceeeeecCcCce
Q psy17188        132 G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  206 (504)
Q Consensus       132 ~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v  206 (504)
                      + .|.|.+||...+.....+.     .+..++..++|-+   +. ..|++-.....|.+|+..+++.....  .......
T Consensus        86 D~~GrIil~d~~~~s~~~~l~-----~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~--~ys~~iL  158 (1062)
T KOG1912|consen   86 DISGRIILVDFVLASVINWLS-----HSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY--DYSHEIL  158 (1062)
T ss_pred             cccCcEEEEEehhhhhhhhhc-----CCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecc--ccCCcce
Confidence            6 8999999997754333322     6788899999987   33 45666666789999999988754333  2333446


Q ss_pred             EEEEECC-CCCEEEEEeCCCcEEEEECCC-------CeEEEeecCCCC----------------C---------eEEEEE
Q psy17188        207 YALAISP-DSKVCFSCCSDGNIAVWDLHN-------QTLVRQFQGHTD----------------G---------ASCIDI  253 (504)
Q Consensus       207 ~~~~~s~-~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~h~~----------------~---------v~~~~~  253 (504)
                      .|+.+.| |.+.+..-+..|.+.+-+.-.       ++..+.-..|..                .         ...++|
T Consensus       159 s~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf  238 (1062)
T KOG1912|consen  159 SCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAF  238 (1062)
T ss_pred             eeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhc
Confidence            7788888 566666666677777665421       233333222221                0         112456


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeC
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~  331 (504)
                      +|.-+.++.......+.++|++-....-             ....  ..+.+.-+.+-|  +...|++...||.+.+|-.
T Consensus       239 ~p~~rn~lfi~~prellv~dle~~~~l~-------------vvpi--er~~akfv~vlP~~~rd~LfclH~nG~ltirvr  303 (1062)
T KOG1912|consen  239 SPHWRNILFITFPRELLVFDLEYECCLA-------------VVPI--ERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVR  303 (1062)
T ss_pred             ChhhhceEEEEeccceEEEcchhhceeE-------------EEEe--ccCCcceeEeccCCCcceEEEEecCCeEEEEEe
Confidence            7765555555667789999987654311             1111  223334455555  4567999999999999976


Q ss_pred             CCCCcccee---ee------------ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-----------
Q psy17188        332 ASPTPRIKA---EL------------TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-----------  385 (504)
Q Consensus       332 ~~~~~~~~~---~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-----------  385 (504)
                      +........   .+            ......+......|.... .++.--.+|.+.+|.+..+.....           
T Consensus       304 k~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~s-a~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~p  382 (1062)
T KOG1912|consen  304 KEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPS-ALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLP  382 (1062)
T ss_pred             eccCccccccchhhccccccceEEEeechhcccceeecCCCChh-hhhhhhhcchhHHHhhhcCCcCccccccccccccc
Confidence            542211111   00            001112223333444222 333344566777777764321100           


Q ss_pred             --------------ccccc-cccCCCceEEEEEc-----------CCC-------CEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        386 --------------VSQLD-CLQRDNYIRSVKLL-----------PDG-------RTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       386 --------------~~~~~-~~~~~~~i~~~~~s-----------~~g-------~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                                    +..+. ...|.....+....           |.+       .++|.|...|+|.++|+.++.  ..
T Consensus       383 f~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~--v~  460 (1062)
T KOG1912|consen  383 FDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNA--VA  460 (1062)
T ss_pred             ccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchh--hh
Confidence                          00000 00122222222222           222       367899999999999998764  34


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeC---------CCcEEEEEcCCcceE--EEEe-ecCCceEEEEEccCCCEEEEec
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCS---------DGNIAVWDLHNQTLV--RQFQ-GHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ..+..|...|.++.|....+++-.+..         -+.+.+-|+.+|.-.  +.++ ....+|..+..|.-++||+..=
T Consensus       461 ~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~F  540 (1062)
T KOG1912|consen  461 ASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILF  540 (1062)
T ss_pred             hhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEe
Confidence            456778888999999877665543321         235778888888543  2222 2456899999999999998764


Q ss_pred             CC
Q psy17188        501 LD  502 (504)
Q Consensus       501 ~D  502 (504)
                      .|
T Consensus       541 r~  542 (1062)
T KOG1912|consen  541 RR  542 (1062)
T ss_pred             cc
Confidence            43

>KOG2041|consensus

Probab=99.47  E-value=3.5e-11  Score=111.44  Aligned_cols=347  Identities=15%  Similarity=0.116  Sum_probs=222.1

Q ss_pred             CCCCCCcceEEEECCCCCcccCCCCCCcccCCCCC--------------ccccceeee-cCCCcEEEEEEcCCCcEEEEe
Q psy17188         67 GIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIP--------------RHARQINTL-SHGEVVCAVTISNPTKYVYTG  131 (504)
Q Consensus        67 ~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~  131 (504)
                      +++.+..+++.+|..+...++++..++.+-...+.              .+...-+++ ||.+.|.-+.|+.+.+-|.++
T Consensus        10 ~iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtS   89 (1189)
T KOG2041|consen   10 GIPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTS   89 (1189)
T ss_pred             CCCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccccc
Confidence            56677888999998777778888777765432221              111222455 899999999999999999998


Q ss_pred             c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEE
Q psy17188        132 G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  210 (504)
Q Consensus       132 ~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  210 (504)
                      . +|-|.||-+-.+.-.   ........++.|.+++|+.||..++..-.||.|.+=.++.++ ..-..+++..  ...+.
T Consensus        90 Dt~GlIiVWmlykgsW~---EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR-IwgKeLkg~~--l~hv~  163 (1189)
T KOG2041|consen   90 DTSGLIIVWMLYKGSWC---EEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR-IWGKELKGQL--LAHVL  163 (1189)
T ss_pred             CCCceEEEEeeecccHH---HHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce-ecchhcchhe--cccee
Confidence            8 999999998765322   222222467789999999999999999999999888776543 2223333322  34688


Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCC-------eE-E---EeecCCCCCeEEEEEc--------cCCCEEEEEcCCCeEEE
Q psy17188        211 ISPDSKVCFSCCSDGNIAVWDLHNQ-------TL-V---RQFQGHTDGASCIDIS--------ADGTKLWTGGLDNTVRS  271 (504)
Q Consensus       211 ~s~~~~~l~~~~~dg~i~iwd~~~~-------~~-~---~~~~~h~~~v~~~~~~--------~~~~~l~s~~~dg~i~~  271 (504)
                      |++|.+.++.+-.+|.+.++|.+..       .+ +   ..+......|-.+.|.        ||...|+.+-..|.+.+
T Consensus       164 ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~Qi  243 (1189)
T KOG2041|consen  164 WSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQI  243 (1189)
T ss_pred             ecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehh
Confidence            9999999888889999999996532       11 1   1112222335666663        46678999988888877


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---------cEEEEeCCCCCccceeee
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---------NLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------~i~v~d~~~~~~~~~~~~  342 (504)
                      ..-.+..                ........-.+....|+++|..|++++.+.         .|++|..-   ......+
T Consensus       244 MR~eND~----------------~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~---G~i~gtl  304 (1189)
T KOG2041|consen  244 MRSENDP----------------EPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY---GHIVGTL  304 (1189)
T ss_pred             hhhcCCC----------------CCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEeccc---hhheEEE
Confidence            6544432                111122335688999999999999987542         35555432   2445556


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-----CC
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----AS  417 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-----dg  417 (504)
                      +.....|++++|-..+-...++   -|+.|.+-+++..                    ..|..-.+.++....     .-
T Consensus       305 kvpg~~It~lsWEg~gLriA~A---vdsfiyfanIRP~--------------------ykWgy~e~TvVy~y~~~e~p~y  361 (1189)
T KOG2041|consen  305 KVPGSCITGLSWEGTGLRIAIA---VDSFIYFANIRPE--------------------YKWGYIEETVVYVYQKEELPQY  361 (1189)
T ss_pred             ecCCceeeeeEEcCCceEEEEE---ecceEEEEeeccc--------------------ceEEEeeeEEEEEEccCCCcce
Confidence            6667789999998777543333   4677777776542                    111111112221111     12


Q ss_pred             cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      .|.+||..+.+.....     .....++++..+--.|+.-..|+.|.-+
T Consensus       362 ~i~Fwdtk~nek~vK~-----V~~~~~~a~~~ehCvL~~~~d~~~i~e~  405 (1189)
T KOG2041|consen  362 GIMFWDTKTNEKTVKT-----VTHFENMAFYREHCVLINRQDDGVIPEY  405 (1189)
T ss_pred             EEEEEecccChhhhhh-----hcceeehheecccEEEEeccccCCCcch
Confidence            3889998876543221     1123455777666666666666666554

>KOG0280|consensus

Probab=99.45  E-value=7.3e-11  Score=97.82  Aligned_cols=271  Identities=15%  Similarity=0.203  Sum_probs=173.5

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc---CCC-EEEEecCCCcEEEEeCCCCCccc-eeeeecC---cCc
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGR-TLIVGGEASNLSIWDLASPTPRI-KAELTSS---APA  205 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~-~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~---~~~  205 (504)
                      |.+.+|++...+... +..+++. ....+..+.|.-   +|. .|+-+...|.|.++......... ...+..-   ...
T Consensus        46 Gkl~Lys~~d~~~~~-l~~~q~~-dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~  123 (339)
T KOG0280|consen   46 GKLHLYSLEDMKLSP-LDTLQCT-DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVE  123 (339)
T ss_pred             cceEEEeecccccCc-cceeeee-cccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhhee
Confidence            568889887755444 4444443 345577777764   455 55666778999999876432211 1111111   112


Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--eecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      ..++.|++.+..++++..+|.+.+-+.....+..  ..+.|.-++.-..|+. +.+.+.+|+.|+.+..||++..+-.+|
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            4578899999999999999999977766665444  7889999999999986 456899999999999999994432222


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCCC
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                                   .....|...|.++.-+| .+.++++|+.|..|++||.++.. +......   .+.|..+.++|.-..
T Consensus       204 -------------~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v---~GGVWRi~~~p~~~~  267 (339)
T KOG0280|consen  204 -------------HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKV---GGGVWRIKHHPEIFH  267 (339)
T ss_pred             -------------ecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCcc---ccceEEEEecchhhh
Confidence                         12345667788888877 67899999999999999998543 2222222   268999999998766


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEE-Eee
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLS-IWD  423 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~-iwd  423 (504)
                      .+++++-.+| .++-+.+...............|.+-...-.|......|++++ .|+.++ +|-
T Consensus       268 ~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl  331 (339)
T KOG0280|consen  268 RLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWL  331 (339)
T ss_pred             HHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeee
Confidence            4555554444 5666666543332222222233443344444433334566643 344433 553

>KOG4532|consensus

Probab=99.41  E-value=2e-10  Score=93.94  Aligned_cols=266  Identities=9%  Similarity=0.052  Sum_probs=173.0

Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECC-----CCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDI  253 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~  253 (504)
                      ...+-+|++.+.........       ..+.|.|     .-.+|+.|+..|...+|...+.+. .+....|...|+-+.=
T Consensus        51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r  123 (344)
T KOG4532|consen   51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKR  123 (344)
T ss_pred             eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhh
Confidence            34577787766442222211       2345544     334899999999999999986543 3333445444432211


Q ss_pred             ccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        254 SAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       254 ~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      ..+ ...+..++.|.++++.+++.+..+               .......-.+.+++++++++++++.+....|..|.+.
T Consensus       124 ~cd~~~~~~i~sndht~k~~~~~~~s~~---------------~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id  188 (344)
T KOG4532|consen  124 YCDLKFPLNIASNDHTGKTMVVSGDSNK---------------FAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAID  188 (344)
T ss_pred             hcccccceeeccCCcceeEEEEecCccc---------------ceeeccccceeeeEEcCCCceEEEecCCCcceEEEeC
Confidence            111 235677888999998888766431               1111111237889999999999999999999999987


Q ss_pred             CCCcccee-eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC--E
Q psy17188        333 SPTPRIKA-ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--T  409 (504)
Q Consensus       333 ~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~  409 (504)
                      ........ ........-.+..|+....  .++++..||.+.|||++...............|.+.+..+.|++.|.  +
T Consensus       189 ~~sey~~~~~~a~t~D~gF~~S~s~~~~--~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDL  266 (344)
T KOG4532|consen  189 DESEYIENIYEAPTSDHGFYNSFSENDL--QFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDL  266 (344)
T ss_pred             CccceeeeeEecccCCCceeeeeccCcc--eEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceE
Confidence            65443333 3344444556677777666  89999999999999999877666655556667999999999998664  5


Q ss_pred             EEEeeCCCcEEEeeCCCCCcceeecccC------CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        410 LIVGGEASNLSIWDLASPTPRIKAELTS------SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       410 l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      |+..-.-+.+.+.|+++...........      ....+..-.|+.++..+.+.+++. +.=|++.+
T Consensus       267 Lf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s  332 (344)
T KOG4532|consen  267 LFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS  332 (344)
T ss_pred             EEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccchh-hheeeccc
Confidence            6666667789999999876544333222      123366667777666666555443 44455443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.40  E-value=2.8e-09  Score=100.15  Aligned_cols=305  Identities=16%  Similarity=0.148  Sum_probs=174.6

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  202 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  202 (504)
                      ++++++.+.++.+.-+|..+++..-....      ...+ ....  .++..+++++.++.+..+|..+++......+.+ 
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~------~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-  135 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDL------DERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-  135 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecC------CCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-
Confidence            34444444488999999887653322211      1111 1122  256778888899999999998887544333322 


Q ss_pred             cCceEE-EEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE-----EEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        203 APACYA-LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-----CIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       203 ~~~v~~-~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                        .+.+ ...  .+..++.++.++.|..||.++++.+.++......+.     .....  +..++.+..++.+..+|.++
T Consensus       136 --~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~t  209 (377)
T TIGR03300       136 --EVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQT  209 (377)
T ss_pred             --eeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccC
Confidence              1211 111  344677788899999999999998887764332211     11111  34778888899999999999


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                      |+. +|........... ......  .......+  .+..+++++.+|.++.||.++++........    .......  
T Consensus       210 G~~-~W~~~~~~~~g~~-~~~~~~--~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~----~~~~p~~--  277 (377)
T TIGR03300       210 GQP-LWEQRVALPKGRT-ELERLV--DVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDAS----SYQGPAV--  277 (377)
T ss_pred             CCE-eeeeccccCCCCC-chhhhh--ccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccC----CccCceE--
Confidence            874 4543211100000 000000  00001111  2557888888999999999887544333321    1112222  


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      ++.  .+..++.++.+..+|..+++..-......    .........  .+..|++++.+|.|+++|..+++.+......
T Consensus       278 ~~~--~vyv~~~~G~l~~~d~~tG~~~W~~~~~~----~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~  349 (377)
T TIGR03300       278 DDN--RLYVTDADGVVVALDRRSGSELWKNDELK----YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTD  349 (377)
T ss_pred             eCC--EEEEECCCCeEEEEECCCCcEEEcccccc----CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcC
Confidence            233  45566788999999987664322111110    111112222  3568899999999999999988876655543


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ... ......+.  ++.|+.++.||.|+.|
T Consensus       350 ~~~-~~~sp~~~--~~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       350 GSG-IASPPVVV--GDGLLVQTRDGDLYAF  376 (377)
T ss_pred             CCc-cccCCEEE--CCEEEEEeCCceEEEe
Confidence            321 11111222  3458888899988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1064|consensus

Probab=99.35  E-value=1.5e-11  Score=124.85  Aligned_cols=247  Identities=16%  Similarity=0.252  Sum_probs=176.5

Q ss_pred             EEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       218 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      +.....++...-|..+-+...  ++.+-..|.++.-+|...+.+||+.||.+++|....++..+             ...
T Consensus      2183 ~~~~n~~~~~~tq~~~~~~~~--~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~-------------~~r 2247 (2439)
T KOG1064|consen 2183 FTPSNLPWLGSTQTSRGASVM--IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVV-------------CFR 2247 (2439)
T ss_pred             CCcccCCccccceecccceeE--eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEE-------------Eee
Confidence            333334555555654433322  23356678888889988899999999999999988776321             222


Q ss_pred             ecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec---cCCCeEEE
Q psy17188        298 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH---HYKSCVKV  374 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~i~i  374 (504)
                      ..+. ..++.+.|+.+|+.+.++..||.+.+|...   ++.....+.|......+.|-..    ++++.   ..++.+.+
T Consensus      2248 t~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~---pk~~~s~qchnk~~~Df~Fi~s----~~~tag~s~d~~n~~l 2319 (2439)
T KOG1064|consen 2248 TAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS---PKPYTSWQCHNKALSDFRFIGS----LLATAGRSSDNRNVCL 2319 (2439)
T ss_pred             ccCc-chhhhhhhcccCCceeeeccCCceeecccC---CcceeccccCCccccceeeeeh----hhhccccCCCCCcccc
Confidence            2233 778899999999999999999999999987   3556666677777777777652    33333   34678999


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC  454 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l  454 (504)
                      ||.-.......+.    ..|.+..+++++.|..+.|++|+.+|.|++||++..+.+.....           +. ...++
T Consensus      2320 wDtl~~~~~s~v~----~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-----------~~-~~~~f 2383 (2439)
T KOG1064|consen 2320 WDTLLPPMNSLVH----TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-----------LD-TREYF 2383 (2439)
T ss_pred             hhcccCcccceee----eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-----------hh-hhhee
Confidence            9986654443333    46888999999999999999999999999999986544332221           44 56789


Q ss_pred             EEeeCCCcEEEEEcCCcceEEEEee-c--CCc---e-EEEEEccCCCEEEEecCCCC
Q psy17188        455 FSCCSDGNIAVWDLHNQTLVRQFQG-H--TDG---A-SCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       455 ~s~~~dg~i~iwd~~~~~~~~~~~~-h--~~~---v-~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++++..|.++||++..-.++..+.. |  .+-   + ..+. --..+.|.+++.|||
T Consensus      2384 ~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~-v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2384 VTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQIN-VGQCNRIFSCGADGT 2439 (2439)
T ss_pred             eccCcccceEEEEccccchhhcCchhhcccchhhhcCceee-eccCceEEEecCCCC
Confidence            9999999999999998877776652 1  111   1 1222 224578999999986

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.35  E-value=3.1e-09  Score=110.55  Aligned_cols=276  Identities=14%  Similarity=0.146  Sum_probs=165.0

Q ss_pred             EEEEEccC-CCEEEEecCCCcEEEEeCCCCCccceeeeec--------------CcCceEEEEECCCCCEEEEEe-CCCc
Q psy17188        163 RSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTS--------------SAPACYALAISPDSKVCFSCC-SDGN  226 (504)
Q Consensus       163 ~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------~~~~v~~~~~s~~~~~l~~~~-~dg~  226 (504)
                      ..++++++ ++.+++-..++.|++||.....   ......              .-.....+++.++++.|+++. .++.
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~---i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~  647 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF---IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHA  647 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCE---EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCce
Confidence            46788874 5566666678889999976432   111111              112347889999888666654 4567


Q ss_pred             EEEEECCCCeEEEeecCC-----------------CCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188        227 IAVWDLHNQTLVRQFQGH-----------------TDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG  288 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h-----------------~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~  288 (504)
                      |+++|+.++.. .++.+-                 -.....++++| ++..+++.+.++.|++||..++.+..+.-....
T Consensus       648 Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~  726 (1057)
T PLN02919        648 LREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYE  726 (1057)
T ss_pred             EEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcc
Confidence            99999887653 333210                 12346899999 566677778889999999998876554321100


Q ss_pred             CCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                      ... .........-.....++++|+++.|++ -..++.|++||+.++.....  ....  ..     .++.   .+..+.
T Consensus       727 ~~~-~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~--~gg~--~~-----~~~~---l~~fG~  793 (1057)
T PLN02919        727 RNL-NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLL--AGGD--PT-----FSDN---LFKFGD  793 (1057)
T ss_pred             ccC-CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEE--Eecc--cc-----cCcc---cccccC
Confidence            000 000000111234678999999985554 45668999999876531100  0000  00     0000   000011


Q ss_pred             CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-----------c
Q psy17188        368 YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----------T  436 (504)
Q Consensus       368 ~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------~  436 (504)
                      .++.         ...         ..-.....++++++|+.+++-..++.|++||..++........           .
T Consensus       794 ~dG~---------g~~---------~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~  855 (1057)
T PLN02919        794 HDGV---------GSE---------VLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALK  855 (1057)
T ss_pred             CCCc---------hhh---------hhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccc
Confidence            1110         000         0011234899999999888888899999999987643322211           1


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      ........++++++|+.+++-+.++.|++||+.+++.
T Consensus       856 a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        856 AQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             cccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            1122467789999999888888899999999998865

>KOG4190|consensus

Probab=99.33  E-value=1.6e-11  Score=110.41  Aligned_cols=286  Identities=14%  Similarity=0.242  Sum_probs=173.2

Q ss_pred             cCCCcEEEEEEcC-CCcEEEEecCCeEEEEeCCCCCC--CCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISN-PTKYVYTGGKGCVKVWDISQPGS--KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~-~~~~l~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~  187 (504)
                      ||++.|.+++--. .+.++.++.|++|++|.++....  .....++....|+.+|.++.|..+-++++++  ||.|++||
T Consensus       733 GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWD  810 (1034)
T KOG4190|consen  733 GHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWD  810 (1034)
T ss_pred             CcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeec
Confidence            8999999986554 45555555599999999976432  2333556666899999999999999998876  78999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECC--CCCEEEEE-eCCCcEEEEECCCCeEEEeec-----CCCCCeEEEEEccCCCE
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISP--DSKVCFSC-CSDGNIAVWDLHNQTLVRQFQ-----GHTDGASCIDISADGTK  259 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~  259 (504)
                      .--++...........+.+..+..-+  +...+..+ +...+|+++|.+..+....++     +.+..+.+++..+.|+.
T Consensus       811 PFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~  890 (1034)
T KOG4190|consen  811 PFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNK  890 (1034)
T ss_pred             ccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcch
Confidence            76554332222222222233333333  44445444 678899999999887666554     34567899999999999


Q ss_pred             EEEEcCCCeEEEEECCCCceE-EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE-EeCCCCCcc
Q psy17188        260 LWTGGLDNTVRSWDLREGCVK-VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI-WDLASPTPR  337 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v-~d~~~~~~~  337 (504)
                      ++.+-..|.|.+.|.++|++. .|..           .     ......++ .|..+.|+....|.++.+ |....+.. 
T Consensus       891 lAa~LSnGci~~LDaR~G~vINswrp-----------m-----ecdllqla-apsdq~L~~saldHslaVnWhaldgim-  952 (1034)
T KOG4190|consen  891 LAAALSNGCIAILDARNGKVINSWRP-----------M-----ECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIM-  952 (1034)
T ss_pred             hhHHhcCCcEEEEecCCCceeccCCc-----------c-----cchhhhhc-CchhHHHHhhcccceeEeeehhcCCee-
Confidence            999999999999999999842 2211           0     00011111 233444555555666666 65443311 


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC-CCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                       ....+....+..-+  -.-|.  -+++......+.+|.-... .....+..+....-.+..++++.-|-..-+..|.+.
T Consensus       953 -h~q~kpppepahfl--qsvgp--SLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~ 1027 (1034)
T KOG4190|consen  953 -HLQDKPPPEPAHFL--QSVGP--SLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEH 1027 (1034)
T ss_pred             -eeccCCCCcchhhh--hccCc--eeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCC
Confidence             11111111010000  00111  3555555666777743221 112222233333445667788888877777788888


Q ss_pred             CcEEE
Q psy17188        417 SNLSI  421 (504)
Q Consensus       417 g~i~i  421 (504)
                      |.|.+
T Consensus      1028 G~IaL 1032 (1034)
T KOG4190|consen 1028 GAIAL 1032 (1034)
T ss_pred             Cceee
Confidence            88765

>KOG0309|consensus

Probab=99.31  E-value=4.1e-11  Score=111.41  Aligned_cols=292  Identities=15%  Similarity=0.228  Sum_probs=192.3

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCC--CEEEEEeCCCcEEEEECCC-
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS--KVCFSCCSDGNIAVWDLHN-  234 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~iwd~~~-  234 (504)
                      ..+++.++..+|.|+-+|.++.-| +.+.|+...-.............|-...|+|..  .+-++......-.+|++.. 
T Consensus        23 v~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s  101 (1081)
T KOG0309|consen   23 VDGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS  101 (1081)
T ss_pred             ecCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence            467788999999999999998765 667777764433333333334446778888743  3555555566678898863 


Q ss_pred             --CeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        235 --QTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       235 --~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                        ......+.+|...|+.+.|+|+. ..+++++.|-.+..||+++-...++.              ...-......++|+
T Consensus       102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys--------------~~~w~s~asqVkwn  167 (1081)
T KOG0309|consen  102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYS--------------TSSWRSAASQVKWN  167 (1081)
T ss_pred             CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceee--------------eecccccCceeeec
Confidence              34556678899999999999954 48899999999999999986533221              12223445678888


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188        312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  391 (504)
                      -....+++.+....|.+||.+.+. .....++.|...+..+.|..-... .+.+.+.|++|+.||.+.........    
T Consensus       168 yk~p~vlasshg~~i~vwd~r~gs-~pl~s~K~~vs~vn~~~fnr~~~s-~~~s~~~d~tvkfw~y~kSt~e~~~~----  241 (1081)
T KOG0309|consen  168 YKDPNVLASSHGNDIFVWDLRKGS-TPLCSLKGHVSSVNSIDFNRFKYS-EIMSSSNDGTVKFWDYSKSTTESKRT----  241 (1081)
T ss_pred             ccCcchhhhccCCceEEEeccCCC-cceEEecccceeeehHHHhhhhhh-hhcccCCCCceeeeccccccccccee----
Confidence            755556666677889999999875 445556667777777777654333 57888899999999987643322111    


Q ss_pred             ccCCCceEEEEEcCCCCEEEE--eeCCCcEEEeeCCCC--------CcceeecccCCCCceeEEEECCC----------C
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIV--GGEASNLSIWDLASP--------TPRIKAELTSSAPACYALAISPD----------S  451 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~--~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~l~~s~~----------~  451 (504)
                      ...+.+|..-.+.|-|.-.++  --.+..+.+++.++.        ....+..+.+|...|....|-..          .
T Consensus       242 vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rd  321 (1081)
T KOG0309|consen  242 VTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRD  321 (1081)
T ss_pred             ccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccc
Confidence            123455666666664432222  111223444333221        12345667788777765555432          2


Q ss_pred             CEEEEeeCCCcEEEEEcCC
Q psy17188        452 KVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~  470 (504)
                      -.|++-+.|..+++|-+.+
T Consensus       322 fQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  322 FQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             eeEEEeecCCceEeeeccH
Confidence            2689999999999998764

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.29  E-value=4.4e-09  Score=98.58  Aligned_cols=227  Identities=11%  Similarity=0.046  Sum_probs=134.2

Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE-EEEEcCC---CeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWTGGLD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      .|.+-|.+... .+.+... +......|+|||+. ++..+.+   ..|.++|+.+++.+.                ....
T Consensus       170 ~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~----------------lt~~  231 (419)
T PRK04043        170 NIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK----------------IASS  231 (419)
T ss_pred             eEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE----------------EecC
Confidence            45555544333 3333323 37788999999984 5544433   579999998887432                1123


Q ss_pred             CCceEEEEEcCCCCEEEEE-eCC--CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC-eEEEEec
Q psy17188        302 DNYIRSVKLLPDGRTLIVG-GEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-CVKVWDI  377 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~-~~d--g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~i~i~d~  377 (504)
                      .+......|+|||+.++.. +.+  ..|.++|+.+++...   +...........|+||++.+++.+...+. .|.+.|+
T Consensus       232 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~---LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl  308 (419)
T PRK04043        232 QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ---ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL  308 (419)
T ss_pred             CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEE---cccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence            3445567899999877654 333  468888887764322   22222234456899999986666543322 5777777


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---------CcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      ..+.......    ..  ..  ...|+|||++|+.....         ..|.+.|+.++....... ...   .....|+
T Consensus       309 ~~g~~~rlt~----~g--~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~-~~~---~~~p~~S  376 (419)
T PRK04043        309 NSGSVEQVVF----HG--KN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTA-NGV---NQFPRFS  376 (419)
T ss_pred             CCCCeEeCcc----CC--Cc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCC-CCC---cCCeEEC
Confidence            6543322111    11  11  24899999998876653         268888988776543332 211   2246999


Q ss_pred             CCCCEEEEeeCCC---cEEEEEcCCcceEEEEeecCCceEE
Q psy17188        449 PDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTDGASC  486 (504)
Q Consensus       449 ~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~  486 (504)
                      |||+.|+....++   .+.+.++.. .....+....+.+..
T Consensus       377 PDG~~I~f~~~~~~~~~L~~~~l~g-~~~~~l~~~~g~~~~  416 (419)
T PRK04043        377 SDGGSIMFIKYLGNQSALGIIRLNY-NKSFLFPLKVGKIQS  416 (419)
T ss_pred             CCCCEEEEEEccCCcEEEEEEecCC-CeeEEeecCCCccCC
Confidence            9999888665432   366667644 333344433444443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.27  E-value=3.8e-09  Score=98.97  Aligned_cols=190  Identities=12%  Similarity=0.097  Sum_probs=121.0

Q ss_pred             cEEEEEEcCCCcE-EEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-C--CCcEEEE
Q psy17188        115 VVCAVTISNPTKY-VYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-E--ASNLSIW  186 (504)
Q Consensus       115 ~V~~v~~s~~~~~-l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~--dg~i~iw  186 (504)
                      .+....|+|||+. ++..+    +..|.++|+.+++. ..+   .  ...+......|+|||+.|+... .  +..|.++
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~-~~l---t--~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~  262 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK-EKI---A--SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLY  262 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE-EEE---e--cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEE
Confidence            6778999999984 55433    35688899877532 111   1  2345566788999999887643 2  3568888


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-C--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      |+.+++..   .+..+........|+|||+.|+..+.. +  .|.+.|+.+++..+.... ..  ....|+|||+.|+..
T Consensus       263 dl~~g~~~---~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~~Ia~~  336 (419)
T PRK04043        263 DTNTKTLT---QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTYKNYIVYS  336 (419)
T ss_pred             ECCCCcEE---EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceECCCCCEEEEE
Confidence            88776532   233333323456899999977766642 3  588889888776444331 11  124899999988776


Q ss_pred             cCC---------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---cEEEEeC
Q psy17188        264 GLD---------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDL  331 (504)
Q Consensus       264 ~~d---------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~v~d~  331 (504)
                      +..         ..|.+.|+.++..+.              +...   .......|+|||+.++.....+   .+.+.++
T Consensus       337 ~~~~~~~~~~~~~~I~v~d~~~g~~~~--------------LT~~---~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l  399 (419)
T PRK04043        337 SRETNNEFGKNTFNLYLISTNSDYIRR--------------LTAN---GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRL  399 (419)
T ss_pred             EcCCCcccCCCCcEEEEEECCCCCeEE--------------CCCC---CCcCCeEECCCCCEEEEEEccCCcEEEEEEec
Confidence            543         367888888776432              1111   1223578999999887765432   2555565


Q ss_pred             CC
Q psy17188        332 AS  333 (504)
Q Consensus       332 ~~  333 (504)
                      ..
T Consensus       400 ~g  401 (419)
T PRK04043        400 NY  401 (419)
T ss_pred             CC
Confidence            44

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.27  E-value=1.7e-08  Score=84.32  Aligned_cols=241  Identities=20%  Similarity=0.179  Sum_probs=135.8

Q ss_pred             EEEccCCCEEEEecCCCcEEEEeCCCCCccceeee---ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        165 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       165 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      ++.+.||+.||.. .|..|.|-..++.-.......   +.....=..++||||+.+||.+...|+|+++|+.... +..+
T Consensus         3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I   80 (282)
T PF15492_consen    3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI   80 (282)
T ss_pred             eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence            5677899988887 567788877655322221221   2222334679999999999999999999999987543 3333


Q ss_pred             cC-------CCCCeEEEEEccC------CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec-ccCCceEE
Q psy17188        242 QG-------HTDGASCIDISAD------GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL-QRDNYIRS  307 (504)
Q Consensus       242 ~~-------h~~~v~~~~~~~~------~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  307 (504)
                      ..       -...|..+.|.+-      ...|+.-..+|.++-|-+..+..+-+        .....+... .....|.+
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y--------~e~hsfsf~~~yp~Gi~~  152 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGY--------QENHSFSFSSHYPHGINS  152 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcc--------eeeEEEEecccCCCceeE
Confidence            32       2245667777542      12466677777777776533211100        000122221 23567999


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe------EEEEecCCCC
Q psy17188        308 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC------VKVWDISQPG  381 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------i~i~d~~~~~  381 (504)
                      +.++|..+.|++|+....      +.+      ........+++-.+-.+......+....++.      ..+|.+-.  
T Consensus       153 ~vy~p~h~LLlVgG~~~~------~~~------~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~--  218 (282)
T PF15492_consen  153 AVYHPKHRLLLVGGCEQN------QDG------MSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPS--  218 (282)
T ss_pred             EEEcCCCCEEEEeccCCC------CCc------cccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccc--
Confidence            999999999888765322      000      0001111222222222222111112111111      11121110  


Q ss_pred             CCCcccc-cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        382 SKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       382 ~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                          +.. .........|..|..||||+.||+...+|.|.+|++.+-..+...
T Consensus       219 ----~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  219 ----FKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW  267 (282)
T ss_pred             ----eeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence                000 011234677999999999999999999999999999876554433

>KOG0309|consensus

Probab=99.27  E-value=8.2e-11  Score=109.44  Aligned_cols=298  Identities=14%  Similarity=0.195  Sum_probs=194.9

Q ss_pred             cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCC--CEEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG--RTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~iw~~  188 (504)
                      .-.+++.++.++|.|+-+|.++.-.+.+-|++.........  . +-..-.|-.+.|+|..  .+-++......-.+|++
T Consensus        22 ~v~~~~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l--~-h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnl   98 (1081)
T KOG0309|consen   22 KVDGGFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWL--H-HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNL   98 (1081)
T ss_pred             EecCcccceeeccccchhhhhhhcCeEEEeccCCCCCceee--e-ccCcchhcceecccCCCCceeEEecCcchhhhhhh
Confidence            34467788999999999998886667788887643222111  1 1123346778898843  34444444556778988


Q ss_pred             CCCC-ccceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        189 ASPT-PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       189 ~~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      .... ......+.+|...|+.+.|+|.. ..+++++.|-.+..||+++. ..+..+..-......++|+-....+.+.+.
T Consensus        99 A~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlassh  178 (1081)
T KOG0309|consen   99 AKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH  178 (1081)
T ss_pred             hcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhcc
Confidence            6433 34567788999999999999855 48999999999999999975 345555555566778899875545556667


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .+.|++||.+.|...              ......+-..+..+.|.. ....+.+.+.|++++.||............ .
T Consensus       179 g~~i~vwd~r~gs~p--------------l~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~v-t  243 (1081)
T KOG0309|consen  179 GNDIFVWDLRKGSTP--------------LCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTV-T  243 (1081)
T ss_pred             CCceEEEeccCCCcc--------------eEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceec-c
Confidence            788999999987632              222233556677777765 334578888999999999876543333322 2


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-----CcccccccccCCCceEEEEEcCCC----------CE
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-----TPVSQLDCLQRDNYIRSVKLLPDG----------RT  409 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~i~~~~~s~~g----------~~  409 (504)
                      ...++..-.+.|-++..++.-.-.+..+.+++.+.....     .........+|...|....|-..+          -.
T Consensus       244 t~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQ  323 (1081)
T KOG0309|consen  244 TNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQ  323 (1081)
T ss_pred             ccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCcccee
Confidence            334666667777666533333333345555555443222     222233444566666665554322          26


Q ss_pred             EEEeeCCCcEEEeeCCC
Q psy17188        410 LIVGGEASNLSIWDLAS  426 (504)
Q Consensus       410 l~~~~~dg~i~iwd~~~  426 (504)
                      |++-+.|..+++|-+.+
T Consensus       324 LVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  324 LVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             EEEeecCCceEeeeccH
Confidence            89999999999998754

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.27  E-value=6.2e-09  Score=98.12  Aligned_cols=301  Identities=10%  Similarity=0.058  Sum_probs=173.7

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCc--------eE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA--------CY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--------v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      +..+++++.++.+.-+|.++++......+......        +. .+..  ++..++.++.++.+..+|.++|+.+.+.
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            55666777778888888887765544443321100        00 0111  3456778888999999999999998887


Q ss_pred             cCCCCCeEE-EEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        242 QGHTDGASC-IDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       242 ~~h~~~v~~-~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      +... .+.+ ...  .+..++.+..++.+..+|.++|+. +|.......     .........++    .  .+..++++
T Consensus       147 ~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~-~W~~~~~~~-----~~~~~~~~sP~----v--~~~~v~~~  211 (394)
T PRK11138        147 KVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAV-KWTVNLDVP-----SLTLRGESAPA----T--AFGGAIVG  211 (394)
T ss_pred             cCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCE-eeeecCCCC-----cccccCCCCCE----E--ECCEEEEE
Confidence            6432 2221 122  244677788899999999999984 555443211     00000001111    1  12356777


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCC--c---eeeEEECC--CCCCceeeeccCCCeEEEEecCCCCCCCccccccccc
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAP--A---CYALAISP--DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ  393 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~--~---i~~~~~~~--~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~  393 (504)
                      +.+|.+..+|..+++............  .   ...+..+|  .+.  .+...+.++.+..+|..+++..-....     
T Consensus       212 ~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~--~vy~~~~~g~l~ald~~tG~~~W~~~~-----  284 (394)
T PRK11138        212 GDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGG--VVYALAYNGNLVALDLRSGQIVWKREY-----  284 (394)
T ss_pred             cCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECC--EEEEEEcCCeEEEEECCCCCEEEeecC-----
Confidence            788899989988876544433221100  0   00111112  122  344555688899899877643211110     


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                        .....+.  .++..|++++.+|.+..+|..+++.+......... .......  .+.+|+.++.||.+++.|..+|+.
T Consensus       285 --~~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~  357 (394)
T PRK11138        285 --GSVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHR-LLTAPVL--YNGYLVVGDSEGYLHWINREDGRF  357 (394)
T ss_pred             --CCccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCC-cccCCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence              0011122  24567888889999999999988765543221111 1111122  256788899999999999999999


Q ss_pred             EEEEeecCCceEE-EEEccCCCEEEEecCCCC
Q psy17188        474 VRQFQGHTDGASC-IDISADGTKLWTGGLDNT  504 (504)
Q Consensus       474 ~~~~~~h~~~v~~-~~~s~d~~~l~s~s~Dgt  504 (504)
                      +.+.+-....+.+ ..+  .+..|+.++.||+
T Consensus       358 ~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~  387 (394)
T PRK11138        358 VAQQKVDSSGFLSEPVV--ADDKLLIQARDGT  387 (394)
T ss_pred             EEEEEcCCCcceeCCEE--ECCEEEEEeCCce
Confidence            8877644333332 222  2447888888874

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.27  E-value=1.7e-08  Score=84.29  Aligned_cols=218  Identities=14%  Similarity=0.174  Sum_probs=137.0

Q ss_pred             EEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeec-CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188        119 VTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       119 v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  197 (504)
                      ++.+.+|++||.-.|..|.|=..+..-. ..+...... ...-.-+.++||||+..||.+...|+|+++|+...+.-.+.
T Consensus         3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~-si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~   81 (282)
T PF15492_consen    3 LALSSDGKLLAILQDQCIEIRSAKDDFS-SIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP   81 (282)
T ss_pred             eeecCCCcEEEEEeccEEEEEeccCCch-heeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC
Confidence            6778999999999999999887655311 111111111 22334678999999999999999999999999753321110


Q ss_pred             ---ee-ecCcCceEEEEECCCC------CEEEEEeCCCcEEEEECCC-----CeEEEeecC---CCCCeEEEEEccCCCE
Q psy17188        198 ---EL-TSSAPACYALAISPDS------KVCFSCCSDGNIAVWDLHN-----QTLVRQFQG---HTDGASCIDISADGTK  259 (504)
Q Consensus       198 ---~~-~~~~~~v~~~~~s~~~------~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~---h~~~v~~~~~~~~~~~  259 (504)
                         .. ..-...|..+.|.+-.      ..|++-..+|.++-|-+..     .+....+..   +...|.++.++|..++
T Consensus        82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~L  161 (282)
T PF15492_consen   82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRL  161 (282)
T ss_pred             cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCE
Confidence               01 1123456677775421      2566666788877776532     233334332   4679999999999888


Q ss_pred             EEEEcCCC-----------eEEEEECCCCceEEEeecCCCCCC-------C---cccc----eecccCCceEEEEEcCCC
Q psy17188        260 LWTGGLDN-----------TVRSWDLREGCVKVWDISQPGSKT-------P---VSQL----DCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       260 l~s~~~dg-----------~i~~wd~~~~~~~~~~~~~~~~~~-------~---~~~~----~~~~~~~~v~~~~~~~~~  314 (504)
                      |+.|+...           -+..|.+-++......+.......       .   +..+    ........|..|..||||
T Consensus       162 LlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg  241 (282)
T PF15492_consen  162 LLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDG  241 (282)
T ss_pred             EEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCC
Confidence            87776421           255666555432221111110000       0   0010    112346789999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      +.|++...+|.|.+|++.+...+
T Consensus       242 ~~La~ih~sG~lsLW~iPsL~~~  264 (282)
T PF15492_consen  242 SLLACIHFSGSLSLWEIPSLRLQ  264 (282)
T ss_pred             CEEEEEEcCCeEEEEecCcchhh
Confidence            99999999999999999876443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.26  E-value=1.8e-08  Score=104.92  Aligned_cols=258  Identities=16%  Similarity=0.173  Sum_probs=159.1

Q ss_pred             EEEEEcCC-CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecC------------CCCceEEEEEccCCCEEEEec-CCC
Q psy17188        117 CAVTISNP-TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQ------------RDNYIRSVKLLPDGRTLIVGG-EAS  181 (504)
Q Consensus       117 ~~v~~s~~-~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~~-~dg  181 (504)
                      ..++++++ ++++++-. ++.|++||.... .   +......+            .-.....+++.++++.|+++. .++
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~-~---i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~  646 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGN-F---IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH  646 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCC-E---EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc
Confidence            35778764 55666655 889999997642 1   11111000            123467899999888776654 456


Q ss_pred             cEEEEeCCCCCccceee-------eecC-------cCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecC---
Q psy17188        182 NLSIWDLASPTPRIKAE-------LTSS-------APACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---  243 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~-------~~~~-------~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---  243 (504)
                      .|+++|+.++.......       ..+.       -..-..++|+| ++.++++...++.|++||..++.... +.+   
T Consensus       647 ~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~  725 (1057)
T PLN02919        647 ALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGY  725 (1057)
T ss_pred             eEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCc
Confidence            79999987643211100       0000       11235799999 55666777778899999998775432 211   


Q ss_pred             ------------CCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce------ecccCCc
Q psy17188        244 ------------HTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD------CLQRDNY  304 (504)
Q Consensus       244 ------------h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  304 (504)
                                  .-.....++++|+++ ++++-+.++.|++||+.++.........+..........      ....-..
T Consensus       726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~  805 (1057)
T PLN02919        726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH  805 (1057)
T ss_pred             cccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence                        112456799999988 445566678999999988764332111000000000000      0011223


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee-----------eccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-----------LTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      ...++++++|+.+++-..++.|++||..++.......           ....-.....++++++++  ++++...++.|+
T Consensus       806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~--lyVaDt~Nn~Ir  883 (1057)
T PLN02919        806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR--LFVADTNNSLIR  883 (1057)
T ss_pred             CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCC--EEEEECCCCEEE
Confidence            5689999999988888889999999987653221111           111223567899999997  788889999999


Q ss_pred             EEecCCCC
Q psy17188        374 VWDISQPG  381 (504)
Q Consensus       374 i~d~~~~~  381 (504)
                      +||+.+..
T Consensus       884 vid~~~~~  891 (1057)
T PLN02919        884 YLDLNKGE  891 (1057)
T ss_pred             EEECCCCc
Confidence            99998754

>KOG4532|consensus

Probab=99.25  E-value=3e-09  Score=87.24  Aligned_cols=243  Identities=11%  Similarity=-0.018  Sum_probs=160.6

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  248 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v  248 (504)
                      ...+||.|+..|...+|...+.+.. ......|...|+-+.-..+ ..-+..++.|.++++.+++-+.....+....-.+
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h-~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~  161 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGH-LYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQ  161 (344)
T ss_pred             cccEEEeccccceeeeecccCcccc-eeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccce
Confidence            5568999999999999999876542 3333444433322211112 2246677788888888877554333222122237


Q ss_pred             EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188        249 SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  328 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  328 (504)
                      .++++++|++++++.+....|..|.+....-.+.            ........+.-.+..|+.....++++..||++.|
T Consensus       162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~------------~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I  229 (344)
T KOG4532|consen  162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIE------------NIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAI  229 (344)
T ss_pred             eeeEEcCCCceEEEecCCCcceEEEeCCccceee------------eeEecccCCCceeeeeccCcceEEEEecCCcEEE
Confidence            8999999999999999999999999876543221            1122233444567889999999999999999999


Q ss_pred             EeCCCCCcc---ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc--ccC-CCceEEEE
Q psy17188        329 WDLASPTPR---IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC--LQR-DNYIRSVK  402 (504)
Q Consensus       329 ~d~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~~~-~~~i~~~~  402 (504)
                      ||++.....   .....+.|.+.+..+.|++.+...++.....-+.+.+.|+++......+.....  ..| ...|....
T Consensus       230 ~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~  309 (344)
T KOG4532|consen  230 YDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTN  309 (344)
T ss_pred             EEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccccccccccc
Confidence            999865432   223345688999999999977766777777778899999987654333322211  112 23366777


Q ss_pred             EcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        403 LLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       403 ~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      |+.++..+.+.+++ .+.-|++.+
T Consensus       310 f~~~n~s~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  310 FNNENESNDVKNEL-QGAEYNILS  332 (344)
T ss_pred             ccCCCcccccccch-hhheeeccc
Confidence            77777666665443 245555543

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.24  E-value=3.7e-10  Score=94.45  Aligned_cols=276  Identities=13%  Similarity=0.214  Sum_probs=164.6

Q ss_pred             CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----eEEEeecCCC------------CCeEEEEEccCC--CEEEE
Q psy17188        202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-----TLVRQFQGHT------------DGASCIDISADG--TKLWT  262 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~h~------------~~v~~~~~~~~~--~~l~s  262 (504)
                      ....|+++.|...|.+|++|...|.|.++.-...     +....+++|.            ..|..+.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            3456899999999999999999999999975532     2233455554            357778887654  36777


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEE------EEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRS------VKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      .+.|.+|++|.+....+++.....-...     + .....+++++      -..+.... ++++        .       
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~-----~-~~~~~g~~~s~~~l~lprls~hd~-iiaa--------~-------  162 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDS-----F-HSPMGGPLTSTKELLLPRLSEHDE-IIAA--------K-------  162 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccc-----c-ccccCCCcCCHHHhhcccccccce-EEEe--------c-------
Confidence            7889999999998776543321110000     0 0000001100      01111111 1111        0       


Q ss_pred             cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc---cCCCceEEEEEcCC-CCEEEE
Q psy17188        337 RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL---QRDNYIRSVKLLPD-GRTLIV  412 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~---~~~~~i~~~~~s~~-g~~l~~  412 (504)
                      ........|...+.++.+..|.+  .+++ ..+-.|.+|+++.......+...+..   .-..-|++..|+|. ...+..
T Consensus       163 p~rvyaNaH~yhiNSiS~NsD~e--t~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmY  239 (460)
T COG5170         163 PCRVYANAHPYHINSISFNSDKE--TLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMY  239 (460)
T ss_pred             cceeccccceeEeeeeeecCchh--eeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEE
Confidence            01112244666788888888876  3443 35677888887754332222111111   11234778899985 345666


Q ss_pred             eeCCCcEEEeeCCCCCc------ceeec--------ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc-ceEEEE
Q psy17188        413 GGEASNLSIWDLASPTP------RIKAE--------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQF  477 (504)
Q Consensus       413 ~~~dg~i~iwd~~~~~~------~~~~~--------~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~  477 (504)
                      .+..|.|++-|++....      .....        +..-...|..+.|+++|+++++-+. -+++|||+... .++.++
T Consensus       240 SsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi  318 (460)
T COG5170         240 SSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTI  318 (460)
T ss_pred             ecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceee
Confidence            77899999999983211      11111        1122346788999999999997754 46999998754 556666


Q ss_pred             eecC------------Cce---EEEEEccCCCEEEEecCCC
Q psy17188        478 QGHT------------DGA---SCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       478 ~~h~------------~~v---~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .-|.            +.|   ..+.||.|.+.+++|+..+
T Consensus       319 ~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~N  359 (460)
T COG5170         319 PMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSN  359 (460)
T ss_pred             chHHHHHHHHHhhhhccceeeeEEEEecCCccccccccccc
Confidence            5442            233   3578899999999988753

>KOG1064|consensus

Probab=99.23  E-value=1.3e-10  Score=118.23  Aligned_cols=197  Identities=15%  Similarity=0.251  Sum_probs=154.2

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .+-..|.++.=+|...+.++|+.||.|++|....++........+. ..|+.+.|+.+|+.+..+..||.+.+|.+. .+
T Consensus      2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk 2283 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PK 2283 (2439)
T ss_pred             cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccC-Cc
Confidence            3456688888888889999999999999999988776555555555 889999999999999999999999999977 66


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEc---CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGG---LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      .....+.|........|-.  ..+++++   .++.+.+||..-....              .+....|...++++++.|.
T Consensus      2284 ~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~--------------s~v~~~H~~gaT~l~~~P~ 2347 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMN--------------SLVHTCHDGGATVLAYAPK 2347 (2439)
T ss_pred             ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCccc--------------ceeeeecCCCceEEEEcCc
Confidence            6777888999999999875  5677764   4678999996543211              2222678889999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP  385 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~  385 (504)
                      ...|++|+.+|.+++||++..+......  .         +.   ...++++++..|.++||++........
T Consensus      2348 ~qllisggr~G~v~l~D~rqrql~h~~~--~---------~~---~~~~f~~~ss~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2348 HQLLISGGRKGEVCLFDIRQRQLRHTFQ--A---------LD---TREYFVTGSSEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred             ceEEEecCCcCcEEEeehHHHHHHHHhh--h---------hh---hhheeeccCcccceEEEEccccchhhc
Confidence            9999999999999999998764332221  1         11   122899999999999999987654433

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.18  E-value=6.1e-08  Score=85.07  Aligned_cols=221  Identities=20%  Similarity=0.269  Sum_probs=144.3

Q ss_pred             EEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCCEEEEEeCCCcEE
Q psy17188        250 CIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLS  327 (504)
Q Consensus       250 ~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~  327 (504)
                      ++.|.+ ++.++++--..+.|..|+..+++...+.                 ... ...+++. ++++ |+++... .+.
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~-----------------~~~-~~G~~~~~~~g~-l~v~~~~-~~~   63 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVID-----------------LPG-PNGMAFDRPDGR-LYVADSG-GIA   63 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE-----------------SSS-EEEEEEECTTSE-EEEEETT-CEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEe-----------------cCC-CceEEEEccCCE-EEEEEcC-ceE
Confidence            578888 6667777777899999999988754321                 111 6677777 5654 5555554 456


Q ss_pred             EEeCCCCCccceeeec--c-CCCceeeEEECCCCCCceeeeccCC--------CeEEEEecCCCCCCCcccccccccCCC
Q psy17188        328 IWDLASPTPRIKAELT--S-SAPACYALAISPDSKSPFFSSHHYK--------SCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~~~~~~~~~--------~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      ++|..+++........  . .......+++.++|+  ++++....        +.+..++.. .. ....     ...-.
T Consensus        64 ~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~--ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~-----~~~~~  134 (246)
T PF08450_consen   64 VVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGN--LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVV-----ADGLG  134 (246)
T ss_dssp             EEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS---EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEE-----EEEES
T ss_pred             EEecCCCcEEEEeeccCCCcccCCCceEEEcCCCC--EEEEecCCCccccccccceEEECCC-Ce-EEEE-----ecCcc
Confidence            6698887555554442  2 445778999999998  55554433        456666654 11 1111     11234


Q ss_pred             ceEEEEEcCCCCEEEE-eeCCCcEEEeeCCCCCc-----ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        397 YIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~-~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ..+.++|+|+++.|++ -+..+.|..|++.....     .....+.......-.+++..+|++.++....+.|.+++.+ 
T Consensus       135 ~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-  213 (246)
T PF08450_consen  135 FPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-  213 (246)
T ss_dssp             SEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-
T ss_pred             cccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-
Confidence            4679999999997764 45677899999864332     1112233333346788999999998888889999999987 


Q ss_pred             cceEEEEeecCCceEEEEEc-cCCCEEEEec
Q psy17188        471 QTLVRQFQGHTDGASCIDIS-ADGTKLWTGG  500 (504)
Q Consensus       471 ~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s  500 (504)
                      |+++..+......+++++|. ++.+.|+..+
T Consensus       214 G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  214 GKLLREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            99888888665689999994 6766665543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.17  E-value=1.2e-07  Score=89.44  Aligned_cols=269  Identities=13%  Similarity=0.116  Sum_probs=155.2

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEE-EEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  248 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v  248 (504)
                      ++..++.++.++.+..+|.++++......+.+.   +.+ ...  .+..++.+..++.+..+|.++|+.+..+.......
T Consensus       119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~---~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~  193 (394)
T PRK11138        119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGE---ALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSL  193 (394)
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCCcccccCCCc---eecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcc
Confidence            456677888899999999998887655544332   111 111  23467778889999999999999988876421111


Q ss_pred             EE-EEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCC
Q psy17188        249 SC-IDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEA  323 (504)
Q Consensus       249 ~~-~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d  323 (504)
                      .. ..-+|  .+..++.++.+|.+..+|..+|+. .|.......... ...      .....+..+|  .+..+++++.+
T Consensus       194 ~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~-~W~~~~~~~~~~-~~~------~~~~~~~~sP~v~~~~vy~~~~~  265 (394)
T PRK11138        194 TLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQL-IWQQRISQPTGA-TEI------DRLVDVDTTPVVVGGVVYALAYN  265 (394)
T ss_pred             cccCCCCCEEECCEEEEEcCCCEEEEEEccCChh-hheeccccCCCc-cch------hcccccCCCcEEECCEEEEEEcC
Confidence            00 00112  233577788899999999999874 444321110000 000      0000111122  24567777788


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  403 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~  403 (504)
                      |.+..+|..+++.........    ...+..  .+.  .+...+.++.+..+|..++...-......    .....+...
T Consensus       266 g~l~ald~~tG~~~W~~~~~~----~~~~~~--~~~--~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~sp~v  333 (394)
T PRK11138        266 GNLVALDLRSGQIVWKREYGS----VNDFAV--DGG--RIYLVDQNDRVYALDTRGGVELWSQSDLL----HRLLTAPVL  333 (394)
T ss_pred             CeEEEEECCCCCEEEeecCCC----ccCcEE--ECC--EEEEEcCCCeEEEEECCCCcEEEcccccC----CCcccCCEE
Confidence            999999999886544433221    111222  223  35555678889999887654321111100    011111222


Q ss_pred             cCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       404 s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                        .+.+|++++.+|.+++.|..+++.+......... ......+  .+..|+.++.||.++.++.
T Consensus       334 --~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~-~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        334 --YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSG-FLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             --ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCc-ceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence              2457888899999999999999876665543221 1111122  3457888899999888764

>KOG3914|consensus

Probab=99.16  E-value=8.2e-10  Score=95.82  Aligned_cols=156  Identities=19%  Similarity=0.282  Sum_probs=110.7

Q ss_pred             EEEEEcCCCcEEEEec-CCeEEEEeCCCCCC-CCceeeeeecCCCCceEEEEEccCCCEEEEe---cCCCcEEEEeCCCC
Q psy17188        117 CAVTISNPTKYVYTGG-KGCVKVWDISQPGS-KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG---GEASNLSIWDLASP  191 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---~~dg~i~iw~~~~~  191 (504)
                      ..+..++++++||.+. +....++++..... .+.....   .-...-+++.|..+......+   ++...+.+|....+
T Consensus        66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~---~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~  142 (390)
T KOG3914|consen   66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS---CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG  142 (390)
T ss_pred             cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe---ecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence            4455677888888877 56666776655332 1122221   223334455555555555444   44555666666543


Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      .   ....-+|...++.++|+||+++++++..|..|++-....-..+..+ -||..-|..++..++. .|+++|.|++|+
T Consensus       143 ~---~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr  218 (390)
T KOG3914|consen  143 R---CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLR  218 (390)
T ss_pred             C---cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEE
Confidence            3   3456789999999999999999999999999999888776666555 4699999999998754 689999999999


Q ss_pred             EEECCCCce
Q psy17188        271 SWDLREGCV  279 (504)
Q Consensus       271 ~wd~~~~~~  279 (504)
                      +||+.+|+.
T Consensus       219 ~Wd~~sgk~  227 (390)
T KOG3914|consen  219 LWDITSGKL  227 (390)
T ss_pred             EEecccCCc
Confidence            999999873

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.16  E-value=2.3e-07  Score=81.37  Aligned_cols=226  Identities=16%  Similarity=0.196  Sum_probs=144.8

Q ss_pred             EEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc-cCCCEEEEEcCCCeEEEEECCCCceEEEeec
Q psy17188        208 ALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-ADGTKLWTGGLDNTVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       208 ~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~  285 (504)
                      ++.|.+ ++.++++--..+.|..|+..+++... +....  ...+++. +++ .|+.+..++ +.++|+.++++..+...
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~~~   78 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLADL   78 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEeec
Confidence            578887 66666666678899999998886643 22122  6777887 565 555555544 45559999876533211


Q ss_pred             CCCCCCCcccceecc-cCCceEEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        286 QPGSKTPVSQLDCLQ-RDNYIRSVKLLPDGRTLIVGGEA--------SNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                                 .... .....+.+++.++|++.++....        |.+..++.. ++..   .....-.....++|+|
T Consensus        79 -----------~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~---~~~~~~~~pNGi~~s~  143 (246)
T PF08450_consen   79 -----------PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT---VVADGLGFPNGIAFSP  143 (246)
T ss_dssp             -----------ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE---EEEEEESSEEEEEEET
T ss_pred             -----------cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE---EEecCcccccceEECC
Confidence                       0011 34568899999999977765543        457777766 3211   1222234678999999


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCC-CCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~  434 (504)
                      +++. ++++-+..+.|..+++..... ......+ ......+..-.+++..+|++.++....+.|.+++.+ ++.+....
T Consensus       144 dg~~-lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~  221 (246)
T PF08450_consen  144 DGKT-LYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIE  221 (246)
T ss_dssp             TSSE-EEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE
T ss_pred             cchh-eeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEc
Confidence            9985 566778888999999875443 1111111 111222347789999999988887788999999988 66666666


Q ss_pred             ccCCCCceeEEEE-CCCCCEEEEe
Q psy17188        435 LTSSAPACYALAI-SPDSKVCFSC  457 (504)
Q Consensus       435 ~~~~~~~v~~l~~-s~~~~~l~s~  457 (504)
                      +.  ...+++++| -++.+.|+..
T Consensus       222 ~p--~~~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  222 LP--VPRPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             -S--SSSEEEEEEESTTSSEEEEE
T ss_pred             CC--CCCEEEEEEECCCCCEEEEE
Confidence            65  336899999 4676666544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.16  E-value=1.7e-07  Score=81.06  Aligned_cols=236  Identities=19%  Similarity=0.233  Sum_probs=150.0

Q ss_pred             eEEEEECC-CCCEEEEEeCCCc-EEEEECCCCeEEEeecCCCCCe--EEEEEccCCCEEEEEcC-----CCeEEEEECCC
Q psy17188        206 CYALAISP-DSKVCFSCCSDGN-IAVWDLHNQTLVRQFQGHTDGA--SCIDISADGTKLWTGGL-----DNTVRSWDLRE  276 (504)
Q Consensus       206 v~~~~~s~-~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~-----dg~i~~wd~~~  276 (504)
                      ...++.+| ....++.+-.-|+ ..+||..+++....+....+.-  -.-.|++||++|++.-.     .|.|-|||...
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            34678888 5557777777765 7889999999888776543332  13579999999998754     47899999984


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe------------------CCCcEEEEeCCCCCccc
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------------------EASNLSIWDLASPTPRI  338 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~dg~i~v~d~~~~~~~~  338 (504)
                      +-.++              -....+.-....+.+.|||+.|+++.                  .+-.+...|..+++...
T Consensus        87 ~~~ri--------------~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~  152 (305)
T PF07433_consen   87 GYRRI--------------GEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLE  152 (305)
T ss_pred             CcEEE--------------eEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceee
Confidence            43322              22223334456788999998888763                  12245666777776555


Q ss_pred             eeee--ccCCCceeeEEECCCCCCceeeeccCCC-------eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        339 KAEL--TSSAPACYALAISPDSKSPFFSSHHYKS-------CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       339 ~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                      ...+  ..+.-.+..+++.+++.  .+...-..+       -+-+++....-............-.+++-++++++++.+
T Consensus       153 q~~Lp~~~~~lSiRHLa~~~~G~--V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~  230 (305)
T PF07433_consen  153 QVELPPDLHQLSIRHLAVDGDGT--VAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRL  230 (305)
T ss_pred             eeecCccccccceeeEEecCCCc--EEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCE
Confidence            5556  44777899999999986  333332222       133333322111111111122334678999999999998


Q ss_pred             EEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        410 LIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       410 l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                      +++.+ ..+.+.+||..++..+....+.    .+..++-.+++ ++++.+ .|.+
T Consensus       231 ia~tsPrGg~~~~~d~~tg~~~~~~~l~----D~cGva~~~~~-f~~ssG-~G~~  279 (305)
T PF07433_consen  231 IAVTSPRGGRVAVWDAATGRLLGSVPLP----DACGVAPTDDG-FLVSSG-QGQL  279 (305)
T ss_pred             EEEECCCCCEEEEEECCCCCEeeccccC----ceeeeeecCCc-eEEeCC-CccE
Confidence            87665 4567999999988765554443    35566776666 555544 3443

>KOG4190|consensus

Probab=99.15  E-value=2.2e-10  Score=103.18  Aligned_cols=225  Identities=15%  Similarity=0.193  Sum_probs=155.1

Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      ++.+.+|...|..++--.+.+-+++++.|+++++|.++...-        +..+...++....|..+|.++.|-.+-+++
T Consensus       728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD--------~~~tsaCQfTY~aHkk~i~~igfL~~lr~i  799 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGD--------EIGTSACQFTYQAHKKPIHDIGFLADLRSI  799 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccC--------ccccceeeeEhhhccCcccceeeeecccee
Confidence            566789999999988777788899999999999999875321        111222356667889999999999988877


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC-CCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD-SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      ++  .||-|++||.--+............+....+..-++ .+..+++.++...+++++|.+..+-....+.......+.
T Consensus       800 ~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna  877 (1034)
T KOG4190|consen  800 AS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNA  877 (1034)
T ss_pred             ee--ccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCch
Confidence            76  478899999766554443333334445555666666 344455555889999999998766555555444445567


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE-EEcCCcceEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV-WDLHNQTLVR  475 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i-wd~~~~~~~~  475 (504)
                      .+.+++..+.|++++++-.+|.|.+.|.++++.+......  ......++ .|..+.|+....|.++.+ |..-+|....
T Consensus       878 ~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpm--ecdllqla-apsdq~L~~saldHslaVnWhaldgimh~  954 (1034)
T KOG4190|consen  878 LTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPM--ECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHL  954 (1034)
T ss_pred             heeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcc--cchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeee
Confidence            7899999999999999999999999999988644322111  11111112 344556666666777777 7665554433

>KOG4714|consensus

Probab=99.14  E-value=2.7e-09  Score=87.12  Aligned_cols=152  Identities=14%  Similarity=0.151  Sum_probs=98.7

Q ss_pred             EEccCCCEEEEecCCCcEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEe-----CCCcEEEEECCCCeEEE
Q psy17188        166 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       166 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~  239 (504)
                      +.+-.++.++++..||.+.+++.+. -........ .|.+ -.+.+....++.+.++.     .-+..+.|+++..+...
T Consensus        96 ~~s~~~t~V~~~~~dg~~~v~s~~~-~~~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~  173 (319)
T KOG4714|consen   96 ACTMTDNRVCIGYADGSLAVFSTDK-DLALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLI  173 (319)
T ss_pred             cccccCCceEecCCCceEEEEechH-HHhhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeeccccccccc
Confidence            3444567899999999999999875 211111111 1111 11222233344444332     12346666665443332


Q ss_pred             eecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEE
Q psy17188        240 QFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTL  317 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l  317 (504)
                      .-..-...|.+++-+| +.+.+++|+.||.+-+||.+.....              ......|+.++..+-|+| ++..|
T Consensus       174 ~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p--------------~S~l~ahk~~i~eV~FHpk~p~~L  239 (319)
T KOG4714|consen  174 PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP--------------VSLLKAHKAEIWEVHFHPKNPEHL  239 (319)
T ss_pred             ccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch--------------HHHHHHhhhhhhheeccCCCchhe
Confidence            2222334589999999 4557788999999999999987431              334456888999999999 67889


Q ss_pred             EEEeCCCcEEEEeCCC
Q psy17188        318 IVGGEASNLSIWDLAS  333 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~  333 (504)
                      +++++||.+--||..+
T Consensus       240 ft~sedGslw~wdas~  255 (319)
T KOG4714|consen  240 FTCSEDGSLWHWDAST  255 (319)
T ss_pred             eEecCCCcEEEEcCCC
Confidence            9999999999999775

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.13  E-value=4.1e-09  Score=88.33  Aligned_cols=256  Identities=16%  Similarity=0.295  Sum_probs=163.7

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC---ccceeeeecCc------------CceEEEEECCCCC--EEE
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT---PRIKAELTSSA------------PACYALAISPDSK--VCF  219 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~------------~~v~~~~~s~~~~--~l~  219 (504)
                      .....|+++.|...|.||++|...|.|.+|.-+...   .+....+.+|.            ..|..+.|..++.  .++
T Consensus        24 tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL  103 (460)
T COG5170          24 TEADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL  103 (460)
T ss_pred             cccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence            346779999999999999999999999999755332   22223344443            2467788876543  566


Q ss_pred             EEeCCCcEEEEECCCCeE------------------------------------------EEee-cCCCCCeEEEEEccC
Q psy17188        220 SCCSDGNIAVWDLHNQTL------------------------------------------VRQF-QGHTDGASCIDISAD  256 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~------------------------------------------~~~~-~~h~~~v~~~~~~~~  256 (504)
                      ..+.|.+|++|.+.....                                          .+.. ..|.-.|.++.++.|
T Consensus       104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD  183 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD  183 (460)
T ss_pred             EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence            667899999998754310                                          0011 347777889999988


Q ss_pred             CCEEEEEcCCCeEEEEECCC--CceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCC
Q psy17188        257 GTKLWTGGLDNTVRSWDLRE--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~  333 (504)
                      ...++++ .|=.|.+|++.-  +...+.++...         ........|++..|+|. .+.+...+..|.|++-|++.
T Consensus       184 ~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~---------nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq  253 (460)
T COG5170         184 KETLLSA-DDLRINLWNLEIIDGSFNIVDIKPH---------NMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQ  253 (460)
T ss_pred             hheeeec-cceeeeeccccccCCceEEEeccCc---------cHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhh
Confidence            8777765 477899998763  34433333221         11112334788889995 45677778889999999984


Q ss_pred             CCc-----c-cee--------eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc-------
Q psy17188        334 PTP-----R-IKA--------ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL-------  392 (504)
Q Consensus       334 ~~~-----~-~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-------  392 (504)
                      ...     . ...        .+..-...|..+.|+++++  ++++. .--++++||.+..........+.+.       
T Consensus       254 ~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr--yIlsR-dyltvkiwDvnm~k~pikTi~~h~~l~~~l~d  330 (460)
T COG5170         254 SALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR--YILSR-DYLTVKIWDVNMAKNPIKTIPMHCDLMDELND  330 (460)
T ss_pred             hhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc--EEEEe-ccceEEEEecccccCCceeechHHHHHHHHHh
Confidence            321     1 011        1112234678899999998  45544 4568999999865432222111100       


Q ss_pred             -cCCCc---eEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        393 -QRDNY---IRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       393 -~~~~~---i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                       -....   -..+.||.|.+.+.+|+..+..-+|-..
T Consensus       331 ~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~  367 (460)
T COG5170         331 VYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD  367 (460)
T ss_pred             hhhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence             01122   2357889999999999888877777643

>KOG0882|consensus

Probab=99.09  E-value=5.1e-09  Score=92.22  Aligned_cols=256  Identities=13%  Similarity=0.102  Sum_probs=178.8

Q ss_pred             CcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---CeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCC
Q psy17188        202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---QTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREG  277 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~  277 (504)
                      |...|+.+..+ ..+++.+++.||.++.|.-..   -+.+..+..|...|.+++.+-++.++.|.+. |..++++|+.+-
T Consensus         8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~   86 (558)
T KOG0882|consen    8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF   86 (558)
T ss_pred             ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence            55666665544 456999999999999997543   2455667778999999999999988999777 999999998864


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CC---CEEEE-EeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DG---RTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      ...                ...........+.|.. .|   ..+++ .-.++.+.++|-............-|..+|..+
T Consensus        87 Dmi----------------nmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i  150 (558)
T KOG0882|consen   87 DMI----------------NMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKI  150 (558)
T ss_pred             chh----------------hhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEE
Confidence            321                0011111112222222 12   12333 346788999998877666667777788899999


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCC----------CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGS----------KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----------~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      .+.+.+.  .+++....|.|.-|.....-+          .................++.|+|+|..+.+-+.|..|+++
T Consensus       151 ~y~qa~D--s~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F  228 (558)
T KOG0882|consen  151 RYNQAGD--SAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGF  228 (558)
T ss_pred             Eeecccc--ceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEE
Confidence            9999988  688888899999999874100          0111112222345667899999999999999999999999


Q ss_pred             eCCCCCcceeecc------------------------------cCC-CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        423 DLASPTPRIKAEL------------------------------TSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       423 d~~~~~~~~~~~~------------------------------~~~-~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +.++++.......                              ..+ ...-+.+.|...+++|+.++-=| |++.++.++
T Consensus       229 ~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn  307 (558)
T KOG0882|consen  229 VFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTN  307 (558)
T ss_pred             EeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecC
Confidence            9988764432211                              001 11224578999999999998877 999999998


Q ss_pred             ceEEEE
Q psy17188        472 TLVRQF  477 (504)
Q Consensus       472 ~~~~~~  477 (504)
                      ++++.+
T Consensus       308 ~v~ri~  313 (558)
T KOG0882|consen  308 TVVRIL  313 (558)
T ss_pred             eEEEEe
Confidence            877665

>KOG0882|consensus

Probab=99.08  E-value=9e-09  Score=90.69  Aligned_cols=327  Identities=13%  Similarity=0.095  Sum_probs=196.4

Q ss_pred             ecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-CCcEEEEe
Q psy17188        110 LSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWD  187 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iw~  187 (504)
                      .-|.+.|+.+..+- .+++.+++ ||.++.|.-..-.....+  .....|-..|.+++.+-++..+.+.+. |..++++|
T Consensus         6 ymhrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfV--KhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfD   82 (558)
T KOG0882|consen    6 YMHRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFV--KHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFD   82 (558)
T ss_pred             hcccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeeh--hhhHHHHHHHHhhhccccceeEeeccCcccceeEEE
Confidence            35888888877654 56777777 999999985431111111  123357788999999999999999877 99999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCCC-C-EEE-EEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPDS-K-VCF-SCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~-~l~-~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      +++-.......+..-.+.+. ...++.. . .++ +.-.++.+.++|-....  ....-.-|..+|.++.+.+-+..+++
T Consensus        83 vEn~DminmiKL~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vS  161 (558)
T KOG0882|consen   83 VENFDMINMIKLVDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVS  161 (558)
T ss_pred             eeccchhhhcccccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceee
Confidence            98765443333333333222 2223321 1 333 33457889999976443  23333459999999999999999999


Q ss_pred             EcCCCeEEEEECCCC-----ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        263 GGLDNTVRSWDLREG-----CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ....|.|..|.....     .-..|++...     ..............++.|+|++..+.+-..|..|++++.++++..
T Consensus       162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~e-----TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklv  236 (558)
T KOG0882|consen  162 IDISGMVEYWSAEGPFQFPRTNLNFELKHE-----TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLV  236 (558)
T ss_pred             ccccceeEeecCCCcccCcccccccccccc-----chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhh
Confidence            999999999998741     0011111111     112233345567889999999999999999999999999988543


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      ....  .....-.   .-|..            .+.+-.+.-+........+.. .....-+.+.|...|++|+.++-=|
T Consensus       237 qeiD--E~~t~~~---~q~ks------------~y~l~~VelgRRmaverelek-~~~~~~~~~~fdes~~flly~t~~g  298 (558)
T KOG0882|consen  237 QEID--EVLTDAQ---YQPKS------------PYGLMHVELGRRMAVERELEK-HGSTVGTNAVFDESGNFLLYGTILG  298 (558)
T ss_pred             hhhh--ccchhhh---hcccc------------ccccceeehhhhhhHHhhHhh-hcCcccceeEEcCCCCEEEeeccee
Confidence            3221  1110000   00000            011111111100000111111 1122234788999999999887666


Q ss_pred             cEEEeeCCCCCcceeecc-------------------------cCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        418 NLSIWDLASPTPRIKAEL-------------------------TSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~-------------------------~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                       |++.++.+++......-                         .....+  .+.+.+|..+++++-...+++++
T Consensus       299 -ikvin~~tn~v~ri~gk~e~ir~~~~sl~q~~~k~~~~~~~~~a~~np--~~~~~~dpt~~c~a~kk~rfylf  369 (558)
T KOG0882|consen  299 -IKVINLDTNTVVRILGKDEAIRFTRLSLYQGAQKSNLAALEVAASNNP--LLEFQKDPTIVCTAFKKNRFYLF  369 (558)
T ss_pred             -EEEEEeecCeEEEEeccchhhhhhhHHHHhhhhhccchhhhhhhccCc--ccccCCCCeEEEeeeecceEEEE
Confidence             88888876643322110                         011111  13466777778888777778887

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.06  E-value=4.4e-07  Score=78.53  Aligned_cols=230  Identities=17%  Similarity=0.200  Sum_probs=146.9

Q ss_pred             EEEEcC-CCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-----cCCCcEEEEeCC
Q psy17188        118 AVTISN-PTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-----GEASNLSIWDLA  189 (504)
Q Consensus       118 ~v~~s~-~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~iw~~~  189 (504)
                      .++.+| ....++.+.  .....+||..++.....+..   ......--.-.||+||++|++.     ...|.|-|||..
T Consensus         9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a---~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWA---PPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcC---CCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            466777 455566665  45678899888654433321   1111112245899999999986     335789999998


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeC------------------CCcEEEEECCCCeEEEe--e--cCCCCC
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCS------------------DGNIAVWDLHNQTLVRQ--F--QGHTDG  247 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~--~--~~h~~~  247 (504)
                      . ......++..|.-.-..+.+.||++.|+++..                  +-++.+.|..+|+++.+  +  ..|...
T Consensus        86 ~-~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lS  164 (305)
T PF07433_consen   86 R-GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLS  164 (305)
T ss_pred             C-CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccc
Confidence            3 44456677777666677899999987777632                  34577778888988877  4  337889


Q ss_pred             eEEEEEccCCCEEEEEcCCCe-------EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        248 ASCIDISADGTKLWTGGLDNT-------VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~~dg~-------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      |..+++.++|..++..-..|.       |-+++.... +..+.         ............+-+|++++++..+++.
T Consensus       165 iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~-~~~~~---------~p~~~~~~l~~Y~gSIa~~~~g~~ia~t  234 (305)
T PF07433_consen  165 IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA-LRLLP---------APEEQWRRLNGYIGSIAADRDGRLIAVT  234 (305)
T ss_pred             eeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc-ceecc---------CChHHHHhhCCceEEEEEeCCCCEEEEE
Confidence            999999999876665544332       333332221 11111         1111223456789999999999887655


Q ss_pred             e-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC
Q psy17188        321 G-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       321 ~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                      + ..+.+.+||..+++......+.    .+..++..+++   ++++.+.
T Consensus       235 sPrGg~~~~~d~~tg~~~~~~~l~----D~cGva~~~~~---f~~ssG~  276 (305)
T PF07433_consen  235 SPRGGRVAVWDAATGRLLGSVPLP----DACGVAPTDDG---FLVSSGQ  276 (305)
T ss_pred             CCCCCEEEEEECCCCCEeeccccC----ceeeeeecCCc---eEEeCCC
Confidence            4 5678999999988544333332    55666666665   4444433

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.04  E-value=2.5e-07  Score=85.61  Aligned_cols=302  Identities=20%  Similarity=0.200  Sum_probs=156.6

Q ss_pred             ccCCCEEEEec---------CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy17188        168 LPDGRTLIVGG---------EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  238 (504)
Q Consensus       168 s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~  238 (504)
                      |||+++++...         ..+.+.|||+++++...   +......+....|+|+|+.++... ++.|.++++.+++..
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~---l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~   76 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITP---LTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET   76 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEE---SS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEE---CcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeE
Confidence            57888777742         34679999999865322   222255678899999999998885 578999998887554


Q ss_pred             EeecCC-----------------CCCeEEEEEccCCCEEEEEcCCC-eEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        239 RQFQGH-----------------TDGASCIDISADGTKLWTGGLDN-TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       239 ~~~~~h-----------------~~~v~~~~~~~~~~~l~s~~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      +.-..-                 -+.-..+.|+||+++|+....|. .+..+.+..       ......           
T Consensus        77 ~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~-------~~~~~~-----------  138 (353)
T PF00930_consen   77 QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPD-------YSPPDS-----------  138 (353)
T ss_dssp             ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEE-------ESSSTE-----------
T ss_pred             EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeec-------cCCccc-----------
Confidence            332211                 11235678999999888765442 222222110       000000           


Q ss_pred             cCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee---ccCCCceeeEEECCCCCCceeeeccCCC---eEEE
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---TSSAPACYALAISPDSKSPFFSSHHYKS---CVKV  374 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~i~i  374 (504)
                      ....+..+.+-.-|.-...    -.+.++|+.+++.......   .....-+..+.|.++++.+++.....+.   .+.+
T Consensus       139 ~yp~~~~~~YPk~G~~np~----v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~  214 (353)
T PF00930_consen  139 QYPEVESIRYPKAGDPNPR----VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVL  214 (353)
T ss_dssp             SS-EEEEEE--BTTS---E----EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEE
T ss_pred             cCCcccccccCCCCCcCCc----eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEE
Confidence            0012334443222322111    1467788877654322222   3455678899999998844444443332   3555


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEc-CCCC-EEEEeeCCCc--EEEeeCCCCCcceeecccCCCCcee-EEEECC
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGR-TLIVGGEASN--LSIWDLASPTPRIKAELTSSAPACY-ALAISP  449 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~-~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~  449 (504)
                      +|..++........ ....--..-....+. +++. +|.....+|.  |++++...+...   .+....-.|+ -+.+++
T Consensus       215 ~d~~tg~~~~~~~e-~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~---~lT~G~~~V~~i~~~d~  290 (353)
T PF00930_consen  215 CDASTGETRVVLEE-TSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR---QLTSGDWEVTSILGWDE  290 (353)
T ss_dssp             EEECTTTCEEEEEE-ESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE---ESS-SSS-EEEEEEEEC
T ss_pred             EECCCCceeEEEEe-cCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee---ccccCceeecccceEcC
Confidence            66655332221111 111111112255554 5554 4555556665  555566554322   3333444564 478888


Q ss_pred             CCCEEE-EeeCC--C--cEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEe
Q psy17188        450 DSKVCF-SCCSD--G--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       450 ~~~~l~-s~~~d--g--~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      +++.|. ++..+  +  .++.-++.++..+..+......-..+.||||+++++-.
T Consensus       291 ~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  291 DNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             TSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             CCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence            877665 44442  2  45555666234445555433333689999999988754

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4714|consensus

Probab=99.02  E-value=1.6e-08  Score=82.75  Aligned_cols=206  Identities=15%  Similarity=0.227  Sum_probs=121.6

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCe-EEEeecC-CCCCeEEEEEccCCCEEEEEcC-----CCeEEEEECCCCceEEEeecC
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHNQT-LVRQFQG-HTDGASCIDISADGTKLWTGGL-----DNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~-----dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      -++-++++..||.+.+.+.+.-. ...++.. |.+ -.+.++...++.+.++..     -+..+.|+++..+.       
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t-------  171 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKT-------  171 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeeccccccc-------
Confidence            45578999999999999976521 1111111 111 122233334555544331     12344454443321       


Q ss_pred             CCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                              ..........|.+++-+| +...+++|+.||.+-+||.+.. ..+...+..|..++..+-|+|.... -+.+
T Consensus       172 --------~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~-~~p~S~l~ahk~~i~eV~FHpk~p~-~Lft  241 (319)
T KOG4714|consen  172 --------LIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV-AMPVSLLKAHKAEIWEVHFHPKNPE-HLFT  241 (319)
T ss_pred             --------ccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccc-cchHHHHHHhhhhhhheeccCCCch-heeE
Confidence                    112222334488999999 4567788899999999999987 3556667888899999999998776 6778


Q ss_pred             ccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC---CcceeecccCCCCce
Q psy17188        366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP---TPRIKAELTSSAPAC  442 (504)
Q Consensus       366 ~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v  442 (504)
                      ++.||.+..||..+                            ..|.++.....+..|=-.+.   .......+......|
T Consensus       242 ~sedGslw~wdas~----------------------------~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~Si  293 (319)
T KOG4714|consen  242 CSEDGSLWHWDAST----------------------------TFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSI  293 (319)
T ss_pred             ecCCCcEEEEcCCC----------------------------ceEEecCccccccccccCCcccceEeeeccccccceee
Confidence            88999999999753                            12222222223444421111   011111122333345


Q ss_pred             eEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        443 YALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       443 ~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      +.+..  -|..|++|+.-+.|++++
T Consensus       294 nsfDV--~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  294 NSFDV--LGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             eeeec--cCceEEeccccceEEEec
Confidence            54444  578899999888888875

>KOG3914|consensus

Probab=99.01  E-value=7.4e-09  Score=90.03  Aligned_cols=161  Identities=14%  Similarity=0.184  Sum_probs=110.3

Q ss_pred             eEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeecCcCceEEEEECCCCCEEEEEe---CCCcEEEEECCCCe
Q psy17188        162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKVCFSCC---SDGNIAVWDLHNQT  236 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~i~iwd~~~~~  236 (504)
                      ...+..++++++||++..+....++++.....  +...... -...-+++.|..+......+.   ....+.+|....+.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            33455677888888888888877777765432  1111111 122234455554444444443   44456666666544


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      . ..+-+|-+-++.++|+||+++|+++..|..|++-....--..              ...+.+|...|..++.-++. .
T Consensus       144 ~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~I--------------esfclGH~eFVS~isl~~~~-~  207 (390)
T KOG3914|consen  144 C-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVI--------------ESFCLGHKEFVSTISLTDNY-L  207 (390)
T ss_pred             c-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccch--------------hhhccccHhheeeeeeccCc-e
Confidence            3 445679999999999999999999999999999776543211              34456889999999988654 4


Q ss_pred             EEEEeCCCcEEEEeCCCCCccce
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      |++++.|+++++||+.+++....
T Consensus       208 LlS~sGD~tlr~Wd~~sgk~L~t  230 (390)
T KOG3914|consen  208 LLSGSGDKTLRLWDITSGKLLDT  230 (390)
T ss_pred             eeecCCCCcEEEEecccCCcccc
Confidence            89999999999999999865533

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.01  E-value=4.6e-07  Score=87.53  Aligned_cols=295  Identities=13%  Similarity=0.127  Sum_probs=166.2

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecC----cCceE--EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSS----APACY--ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  244 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~----~~~v~--~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h  244 (504)
                      +..++.++.++.|.-.|..+++..........    ...+.  .+... ++..++.++.++.|.-+|.++|+.+.++...
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            44566677788999999888775544433221    00010  11111 2257788889999999999999999887643


Q ss_pred             CCC--eEEEEEcc--CCCEEEEEc---------CCCeEEEEECCCCceEEEeecCCCCCC-Ccccce-----ecccCCce
Q psy17188        245 TDG--ASCIDISA--DGTKLWTGG---------LDNTVRSWDLREGCVKVWDISQPGSKT-PVSQLD-----CLQRDNYI  305 (504)
Q Consensus       245 ~~~--v~~~~~~~--~~~~l~s~~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~v  305 (504)
                      ...  -..+.-+|  .+..++.++         .++.+..+|..+|+. +|......... ......     .......+
T Consensus       140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~-~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  218 (488)
T cd00216         140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKL-LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTS  218 (488)
T ss_pred             CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCce-eeEeeccCCCcCCCCCCCCCcceecCCCCCc
Confidence            321  00111112  123555554         368899999999984 56554321110 000000     00000111


Q ss_pred             -EEEEEcCCCCEEEEEeCCC------------------cEEEEeCCCCCccceeeeccCCC----ceeeEEEC----CCC
Q psy17188        306 -RSVKLLPDGRTLIVGGEAS------------------NLSIWDLASPTPRIKAELTSSAP----ACYALAIS----PDS  358 (504)
Q Consensus       306 -~~~~~~~~~~~l~~~~~dg------------------~i~v~d~~~~~~~~~~~~~~~~~----~i~~~~~~----~~~  358 (504)
                       ...++.+.+..+++++.++                  .+.-+|.++++.........+..    ......+.    -++
T Consensus       219 w~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g  298 (488)
T cd00216         219 WASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDG  298 (488)
T ss_pred             cCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCC
Confidence             2345566677788887665                  68889999887666654433211    00000111    122


Q ss_pred             C-CceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe------------------eCCCcE
Q psy17188        359 K-SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG------------------GEASNL  419 (504)
Q Consensus       359 ~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~------------------~~dg~i  419 (504)
                      . ..+++.++.+|.+..+|.++++..-.....        ...++.+|  ..++.+                  ..+|.+
T Consensus       299 ~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~--------~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l  368 (488)
T cd00216         299 KPVPAIVHAPKNGFFYVLDRTTGKLISARPEV--------EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGL  368 (488)
T ss_pred             CeeEEEEEECCCceEEEEECCCCcEeeEeEee--------ccccccCC--ceEEEccccccccCcccccCCCCCCCceEE
Confidence            1 125677778999999999887543322111        01223333  223332                  235778


Q ss_pred             EEeeCCCCCcceeecccCCC------Cce--eEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        420 SIWDLASPTPRIKAELTSSA------PAC--YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~------~~v--~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      .-.|..+++.+.......+.      ...  ..+..  .+..|+.++.||.++.+|.++|+++.+.+-
T Consensus       369 ~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         369 AALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             EEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence            88888888777666554211      011  11122  467888999999999999999999988764

The alignment model contains an 8-bladed beta-propeller.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.97  E-value=9.7e-08  Score=83.59  Aligned_cols=226  Identities=18%  Similarity=0.199  Sum_probs=132.9

Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEE--EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCID--ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~--~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      +|.|..||.++|+.+..... ........  ..+++..+++++.++.|..||..+|+. +|....+...           
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~-~W~~~~~~~~-----------   68 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDL-GPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKV-LWRFDLPGPI-----------   68 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEEC-SSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEE-EEEEECSSCG-----------
T ss_pred             CCEEEEEECCCCCEEEEEEC-CCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCE-EEEeeccccc-----------
Confidence            68899999999999988863 11122222  233566788888999999999999974 4443321110           


Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee-eeccCCC-ceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELTSSAP-ACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                          .... ...+..+++++.++.+..+|..+++..... ....... .........++.  .++.+..++.+..+|.++
T Consensus        69 ----~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~l~~~d~~t  141 (238)
T PF13360_consen   69 ----SGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGD--RLYVGTSSGKLVALDPKT  141 (238)
T ss_dssp             ----GSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETT--EEEEEETCSEEEEEETTT
T ss_pred             ----ccee-eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecC--EEEEEeccCcEEEEecCC
Confidence                0001 223556777778889999999888665552 2221111 111122222233  566666789999999887


Q ss_pred             CCCCCcccccccccCCC------ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        380 PGSKTPVSQLDCLQRDN------YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~------~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      +........ .......      .+..-....++ .++.+..++.+..+|+.+++...... ..   .+.. ....++..
T Consensus       142 G~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~-~~---~~~~-~~~~~~~~  214 (238)
T PF13360_consen  142 GKLLWKYPV-GEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP-IS---GIYS-LPSVDGGT  214 (238)
T ss_dssp             TEEEEEEES-STT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC-SS----ECE-CEECCCTE
T ss_pred             CcEEEEeec-CCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec-CC---CccC-CceeeCCE
Confidence            644222211 1100011      11222233345 77777777764444999887543222 11   1222 24567888


Q ss_pred             EEEeeCCCcEEEEEcCCcceEEE
Q psy17188        454 CFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       454 l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      |+.++.++.+..||+++|+.+.+
T Consensus       215 l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  215 LYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEE
T ss_pred             EEEEeCCCEEEEEECCCCCEEeE
Confidence            88888999999999999997653

...

>KOG1920|consensus

Probab=98.94  E-value=2.5e-06  Score=85.08  Aligned_cols=242  Identities=15%  Similarity=0.104  Sum_probs=153.0

Q ss_pred             CcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC---
Q psy17188        114 EVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA---  189 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~---  189 (504)
                      +.|.++.|.-+..-++.+. +|.|.+-|.++..    +...  ..-++.|.+++||||++.++..+...++.+-+-.   
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~----~eiv--g~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~  142 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLE----LEIV--GNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEP  142 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccc----eeee--eeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccc
Confidence            5788899887766555444 8888888876631    1111  1357889999999999999998877777665421   


Q ss_pred             -CCCc-----------------cceeeeecC---------------------cCceEEEEECCCCCEEEEEe----CC-C
Q psy17188        190 -SPTP-----------------RIKAELTSS---------------------APACYALAISPDSKVCFSCC----SD-G  225 (504)
Q Consensus       190 -~~~~-----------------~~~~~~~~~---------------------~~~v~~~~~s~~~~~l~~~~----~d-g  225 (504)
                       ..+.                 +....+.+.                     ...=+.+.|--||+++++..    .+ .
T Consensus       143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence             0000                 000111110                     01123589999999988742    23 7


Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc---CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG---LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      .|+|||-+ |.+-..-....+.=.+++|-|.|..+++-.   .|+.|.++..+.-+-..+            .+......
T Consensus       223 kirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f------------~l~~p~de  289 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEF------------VLPFPLDE  289 (1265)
T ss_pred             eEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcccccc------------ccCCcccc
Confidence            89999966 544333333344456899999999888753   455788887654332111            12222233


Q ss_pred             CceEEEEEcCCCCEEEE---EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        303 NYIRSVKLLPDGRTLIV---GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~---~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..+..++|+.++..|++   ......|++|-+.+..+-....+.......  +.|+|.....+.+.+ .+|...++|+
T Consensus       290 ~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~-~sG~~~v~~~  364 (1265)
T KOG1920|consen  290 KEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLR-ESGQRLVRDF  364 (1265)
T ss_pred             cchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEe-cCCcEEEEEE
Confidence            34899999999999988   445556999999887766665555544333  888886655344443 5666666654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.91  E-value=5.5e-07  Score=78.85  Aligned_cols=284  Identities=19%  Similarity=0.224  Sum_probs=158.0

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeeecC-
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELTSS-  202 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~-  202 (504)
                      +.+.|+|.++++.   +-.+.    .+..-.+..+||++.++++.          ..-.|.+||..+........++.. 
T Consensus        17 ~rv~viD~d~~k~---lGmi~----~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~   89 (342)
T PF06433_consen   17 SRVYVIDADSGKL---LGMID----TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKP   89 (342)
T ss_dssp             EEEEEEETTTTEE---EEEEE----EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-
T ss_pred             ceEEEEECCCCcE---EEEee----cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcc
Confidence            4788999776432   11111    23344577899999998753          233599999998765554445432 


Q ss_pred             cC----ceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC-
Q psy17188        203 AP----ACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR-  275 (504)
Q Consensus       203 ~~----~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~-  275 (504)
                      ..    ....++++.|++++++...  ..+|.|.|+..++.+..+.- .+ +..+--. .++.+.+.+.||.+....+. 
T Consensus        90 R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~-PG-C~~iyP~-~~~~F~~lC~DGsl~~v~Ld~  166 (342)
T PF06433_consen   90 RAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT-PG-CWLIYPS-GNRGFSMLCGDGSLLTVTLDA  166 (342)
T ss_dssp             B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG-TS-EEEEEEE-ETTEEEEEETTSCEEEEEETS
T ss_pred             hheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC-CC-EEEEEec-CCCceEEEecCCceEEEEECC
Confidence            11    1234678889998777643  45799999999999888762 22 2222112 23468888999999999888 


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      .|+...-. .         .......+..+..-++...+..++..+.+|.|+-.|+.................-..-.|-
T Consensus       167 ~Gk~~~~~-t---------~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~Wr  236 (342)
T PF06433_consen  167 DGKEAQKS-T---------KVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWR  236 (342)
T ss_dssp             TSSEEEEE-E---------EESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEE
T ss_pred             CCCEeEee-c---------cccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcC
Confidence            45432110 0         0001111112223344555556666778888888887765422222111100000001122


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC--------CC--cEEEeeCC
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--------AS--NLSIWDLA  425 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~--------dg--~i~iwd~~  425 (504)
                      |.|-                                       .-+++++..+.|++--.        |+  .|.++|+.
T Consensus       237 PGG~---------------------------------------Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~  277 (342)
T PF06433_consen  237 PGGW---------------------------------------QLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLK  277 (342)
T ss_dssp             E-SS---------------------------------------S-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETT
T ss_pred             Ccce---------------------------------------eeeeeccccCeEEEEecCCCCCCccCCceEEEEEECC
Confidence            2221                                       13455544433333211        11  38888888


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCC-EEEEe-eCCCcEEEEEcCCcceEEEEee
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSK-VCFSC-CSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      +++.+....+..   .+.+++.+.|.+ +|++. ..++.+.+||..+|+++.++..
T Consensus       278 t~krv~Ri~l~~---~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  278 THKRVARIPLEH---PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             TTEEEEEEEEEE---EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             CCeEEEEEeCCC---ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            887766666543   466889999877 55444 4578999999999999998874

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG3617|consensus

Probab=98.89  E-value=1.6e-07  Score=89.59  Aligned_cols=111  Identities=17%  Similarity=0.180  Sum_probs=91.9

Q ss_pred             ceEEEEEccCCCEEEEec----CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        161 YIRSVKLLPDGRTLIVGG----EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .-+-..|+|...++|+++    ..|.|.||- +++++......+.|   +++++|+|..-.|+.|-.-|.+.+|...+.+
T Consensus        17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e   92 (1416)
T KOG3617|consen   17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE   92 (1416)
T ss_pred             cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccccee---hhhhccChHHHHHhhccccceeEEEecCCce
Confidence            334457899888888875    467888884 45565555555556   5679999998899999999999999988888


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      .......|..+|..+.|+++|..++++..-|.+.+|...
T Consensus        93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            777777899999999999999999999999999999876

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.86  E-value=1.1e-05  Score=78.06  Aligned_cols=297  Identities=12%  Similarity=0.097  Sum_probs=155.8

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeee-cCCCCceE--EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDC-LQRDNYIR--SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  200 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~~~~v~--~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  200 (504)
                      ++++++...++.+.-.|.++++..-....... ......+.  .+... ++..++.++.++.|.-+|.++++........
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            45555555578888888877654333221100 00000000  11111 2267888888999999999998866555444


Q ss_pred             cCcCceEEEEECC--CCCEEEEEe---------CCCcEEEEECCCCeEEEeecCCCCC--------------------e-
Q psy17188        201 SSAPACYALAISP--DSKVCFSCC---------SDGNIAVWDLHNQTLVRQFQGHTDG--------------------A-  248 (504)
Q Consensus       201 ~~~~~v~~~~~s~--~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~h~~~--------------------v-  248 (504)
                      .+...-..+.-+|  .+..++.++         .++.+..+|..+|+.+..++.....                    + 
T Consensus       140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw  219 (488)
T cd00216         140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW  219 (488)
T ss_pred             CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence            3310001111122  123455554         3678999999999988877542110                    1 


Q ss_pred             EEEEEccCCCEEEEEcCCC------------------eEEEEECCCCceEEEeecCCCCCCCcccceecccCC-ceEEEE
Q psy17188        249 SCIDISADGTKLWTGGLDN------------------TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVK  309 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~  309 (504)
                      ....+.+.+..++.++.++                  .|.-+|.++|+. .|..........    ....... .+..+.
T Consensus       220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~-~W~~~~~~~~~~----~~~~~s~p~~~~~~  294 (488)
T cd00216         220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV-KWFYQTTPHDLW----DYDGPNQPSLADIK  294 (488)
T ss_pred             CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE-EEEeeCCCCCCc----ccccCCCCeEEecc
Confidence            1234444556777777665                  799999999985 354432111000    0000000 011111


Q ss_pred             EcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee-----------------ccCC
Q psy17188        310 LLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS-----------------HHYK  369 (504)
Q Consensus       310 ~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------~~~~  369 (504)
                       .-++.   .+++++.+|.+..+|.++++.........     ..++.+|  .. +++.                 ...+
T Consensus       295 -~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~-----~~~~~~~--~~-vyv~~~~~~~~~~~~~~~~~~~~~~  365 (488)
T cd00216         295 -PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE-----QPMAYDP--GL-VYLGAFHIPLGLPPQKKKRCKKPGK  365 (488)
T ss_pred             -ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec-----cccccCC--ce-EEEccccccccCcccccCCCCCCCc
Confidence             11333   57788889999999999987665544321     1122222  11 1111                 1235


Q ss_pred             CeEEEEecCCCCCCCcccccccc---cCCCce--EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC
Q psy17188        370 SCVKVWDISQPGSKTPVSQLDCL---QRDNYI--RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  437 (504)
Q Consensus       370 ~~i~i~d~~~~~~~~~~~~~~~~---~~~~~i--~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  437 (504)
                      +.+.-.|..+++..-........   ....+.  ..+..  .+..|++++.||.|+.+|.++++.+....+..
T Consensus       366 G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~  436 (488)
T cd00216         366 GGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRTPS  436 (488)
T ss_pred             eEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEECCC
Confidence            66777776665432222111000   000111  11222  45688999999999999999999887776643

The alignment model contains an 8-bladed beta-propeller.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.85  E-value=3.6e-07  Score=80.00  Aligned_cols=225  Identities=20%  Similarity=0.186  Sum_probs=131.4

Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                      +|+|..||..+++......+........+. ..+++..+++++.++.|..||..+|+.+..+.. ...+.... ..++..
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~   78 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGR   78 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccc
Confidence            688999999887765555442212222211 222556778888999999999999999988875 33322222 223556


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEee-cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDI-SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  338 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~  338 (504)
                      ++.++.++.++.+|..+|+. .|.. .......           ..........++..++++..++.+..+|.++++...
T Consensus        79 v~v~~~~~~l~~~d~~tG~~-~W~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w  146 (238)
T PF13360_consen   79 VYVGTSDGSLYALDAKTGKV-LWSIYLTSSPPA-----------GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLW  146 (238)
T ss_dssp             EEEEETTSEEEEEETTTSCE-EEEEEE-SSCTC-----------STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEE
T ss_pred             cccccceeeeEecccCCcce-eeeecccccccc-----------ccccccCceEecCEEEEEeccCcEEEEecCCCcEEE
Confidence            77777888999999999985 4442 1110000           011111222237788888889999999999986655


Q ss_pred             eeeeccCCC--c------eeeEEECCCCCCceeeeccCCC-eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        339 KAELTSSAP--A------CYALAISPDSKSPFFSSHHYKS-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       339 ~~~~~~~~~--~------i~~~~~~~~~~~~~~~~~~~~~-~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                      .........  .      +..-....++   .+.....++ .+.+ |+.++...-   ..   . ...+.. ....++..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~g~~~~~-d~~tg~~~w---~~---~-~~~~~~-~~~~~~~~  214 (238)
T PF13360_consen  147 KYPVGEPRGSSPISSFSDINGSPVISDG---RVYVSSGDGRVVAV-DLATGEKLW---SK---P-ISGIYS-LPSVDGGT  214 (238)
T ss_dssp             EEESSTT-SS--EEEETTEEEEEECCTT---EEEEECCTSSEEEE-ETTTTEEEE---EE---C-SS-ECE-CEECCCTE
T ss_pred             EeecCCCCCCcceeeecccccceEEECC---EEEEEcCCCeEEEE-ECCCCCEEE---Ee---c-CCCccC-CceeeCCE
Confidence            554422111  1      1122222233   233344444 4555 887764211   10   0 111112 14567778


Q ss_pred             EEEeeCCCcEEEeeCCCCCcce
Q psy17188        410 LIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       410 l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      |++++.++.|..||+++++...
T Consensus       215 l~~~~~~~~l~~~d~~tG~~~W  236 (238)
T PF13360_consen  215 LYVTSSDGRLYALDLKTGKVVW  236 (238)
T ss_dssp             EEEEETTTEEEEEETTTTEEEE
T ss_pred             EEEEeCCCEEEEEECCCCCEEe
Confidence            8888899999999999986543

...

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.84  E-value=6.4e-06  Score=76.30  Aligned_cols=301  Identities=20%  Similarity=0.198  Sum_probs=156.7

Q ss_pred             cCCCcEEEEe----------cCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy17188        122 SNPTKYVYTG----------GKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       122 s~~~~~l~~~----------~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      |||+++++..          ..+.+.|||++++..    ..+.  .....+....|||+|+.++... ++.|.+++..++
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~----~~l~--~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~   73 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEI----TPLT--PPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATG   73 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEE----EESS---EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTS
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCce----EECc--CCccccccceeecCCCeeEEEe-cCceEEEECCCC
Confidence            5788887773          246799999988421    1111  1256788999999999999985 678999998765


Q ss_pred             CccceeeeecC----------------cCceEEEEECCCCCEEEEEeCC-CcEEEEECCCCeEEEeecCCC---CCeEEE
Q psy17188        192 TPRIKAELTSS----------------APACYALAISPDSKVCFSCCSD-GNIAVWDLHNQTLVRQFQGHT---DGASCI  251 (504)
Q Consensus       192 ~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~h~---~~v~~~  251 (504)
                      +.. ..+..+.                -..-..+.||||+++|+....| ..|..+.+.      ......   -.+..+
T Consensus        74 ~~~-~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~------~~~~~~~~yp~~~~~  146 (353)
T PF00930_consen   74 QET-QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP------DYSPPDSQYPEVESI  146 (353)
T ss_dssp             EEE-ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE------EESSSTESS-EEEEE
T ss_pred             CeE-EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEee------ccCCccccCCccccc
Confidence            322 1222220                1122568899999988877544 334443321      111111   123444


Q ss_pred             EEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE--eCCC---cE
Q psy17188        252 DISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG--GEAS---NL  326 (504)
Q Consensus       252 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg---~i  326 (504)
                      .+-.-|.-...    -.+.++|+.+++......          ..........+..+.|.++++.|++.  .++.   .+
T Consensus       147 ~YPk~G~~np~----v~l~v~~~~~~~~~~~~~----------~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l  212 (353)
T PF00930_consen  147 RYPKAGDPNPR----VSLFVVDLASGKTTELDP----------PNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDL  212 (353)
T ss_dssp             E--BTTS---E----EEEEEEESSSTCCCEE-------------HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEE
T ss_pred             ccCCCCCcCCc----eEEEEEECCCCcEEEeee----------ccccCCCccCcccceecCCCcEEEEEEcccCCCEEEE
Confidence            44222222111    146778888876431110          10112346678999999999844443  3333   36


Q ss_pred             EEEeCCCCCccceeeeccCC--CceeeEEEC-CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceE-EEE
Q psy17188        327 SIWDLASPTPRIKAELTSSA--PACYALAIS-PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR-SVK  402 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~~~~~~--~~i~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~-~~~  402 (504)
                      .++|..++............  .......+. +++...++++- .+|.-++|-++.....  ..  ......-.|. -+.
T Consensus       213 ~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~-~~G~~hly~~~~~~~~--~~--~lT~G~~~V~~i~~  287 (353)
T PF00930_consen  213 VLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISE-RDGYRHLYLYDLDGGK--PR--QLTSGDWEVTSILG  287 (353)
T ss_dssp             EEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEE-TTSSEEEEEEETTSSE--EE--ESS-SSS-EEEEEE
T ss_pred             EEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEE-cCCCcEEEEEcccccc--ee--ccccCceeecccce
Confidence            67788776544333222211  122345554 66666444444 7776666555443222  11  1112344453 477


Q ss_pred             EcCCCCEEE-EeeCC--C--cEEEeeCC-CCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        403 LLPDGRTLI-VGGEA--S--NLSIWDLA-SPTPRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       403 ~s~~g~~l~-~~~~d--g--~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      ++++++.|+ ++..+  .  .|+.-++. .+...++.......   ..+.|||++++++..+
T Consensus       288 ~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~---~~~~~Spdg~y~v~~~  346 (353)
T PF00930_consen  288 WDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDH---YSASFSPDGKYYVDTY  346 (353)
T ss_dssp             EECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTT---EEEEE-TTSSEEEEEE
T ss_pred             EcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCc---eEEEECCCCCEEEEEE
Confidence            888877665 44432  2  35555555 44333332222211   5779999999988543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1832|consensus

Probab=98.83  E-value=8.2e-09  Score=98.51  Aligned_cols=263  Identities=14%  Similarity=0.179  Sum_probs=173.2

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC--eEEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN--TVRSWD  273 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd  273 (504)
                      ...+..|....+|++|+-+.+.|+.|+..|.|+++++.+|.......+|..+|+-+.-+.||..+++.+.-.  ...+|+
T Consensus      1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred             chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence            345566778899999999999999999999999999999999999999999999999999998877665433  467888


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee--eccCCCceee
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE--LTSSAPACYA  351 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~~i~~  351 (504)
                      +..--                  .....-..-.++.|+.....-+.|+......+||+++........  .......-..
T Consensus      1174 ~~s~~------------------~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~ 1235 (1516)
T KOG1832|consen 1174 ASSTG------------------GPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNL 1235 (1516)
T ss_pred             ccccc------------------CccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccc
Confidence            76521                  111112334577888765555666666789999999886443321  1122223367


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      ..|+|+..  ++.-   ||  .+||++.......+..+...      ..-.|+|.|..++.-+     .|||+++-+.+.
T Consensus      1236 a~FsP~D~--LIln---dG--vLWDvR~~~aIh~FD~ft~~------~~G~FHP~g~eVIINS-----EIwD~RTF~lLh 1297 (1516)
T KOG1832|consen 1236 AHFSPCDT--LILN---DG--VLWDVRIPEAIHRFDQFTDY------GGGGFHPSGNEVIINS-----EIWDMRTFKLLH 1297 (1516)
T ss_pred             cccCCCcc--eEee---Cc--eeeeeccHHHHhhhhhheec------ccccccCCCceEEeec-----hhhhhHHHHHHh
Confidence            78889877  3332   33  47999876444444333211      1456999999988865     389998765432


Q ss_pred             eecccCCCCceeEEEECCCCCEEEEee-----C-C-----------CcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFSCC-----S-D-----------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~-----~-d-----------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      ...  .  -.-..+.|+..|..+...-     . |           ...|-+|..+.+.+.++.. ...+..++-+|...
T Consensus      1298 ~VP--~--Ldqc~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v-~R~~~Dlct~~~D~ 1372 (1516)
T KOG1832|consen 1298 SVP--S--LDQCAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPV-DRCLLDLCTEPTDS 1372 (1516)
T ss_pred             cCc--c--ccceEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeec-ccchhhhhcCCccc
Confidence            221  1  1124457777776554332     0 0           1244555556666666663 44566777777777


Q ss_pred             EEEEe
Q psy17188        495 KLWTG  499 (504)
Q Consensus       495 ~l~s~  499 (504)
                      +|..-
T Consensus      1373 ~l~vI 1377 (1516)
T KOG1832|consen 1373 FLGVI 1377 (1516)
T ss_pred             eEEEE
Confidence            76654

>KOG2114|consensus

Probab=98.81  E-value=1.8e-06  Score=82.86  Aligned_cols=219  Identities=14%  Similarity=0.170  Sum_probs=141.2

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC-eEEEEEccCCCEEEEEcCCC-----eEEEEECCCCceEEEe
Q psy17188        210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTKLWTGGLDN-----TVRSWDLREGCVKVWD  283 (504)
Q Consensus       210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~  283 (504)
                      +|++.+..++.|+.+|.|.+.+ +.-+.++.++.+... |..+....+.++|++.+.|+     .+++|+++.-+-    
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~----  104 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDK----  104 (933)
T ss_pred             EEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCC----
Confidence            4677888999999999998887 445566788887777 55555554556888887775     488998875320    


Q ss_pred             ecCCCCCCCc---c--cceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        284 ISQPGSKTPV---S--QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       284 ~~~~~~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                         ..++...   .  .........++.+++.+.+-+.+++|-.+|.|..+.-.-.+                       
T Consensus       105 ---n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~R-----------------------  158 (933)
T KOG2114|consen  105 ---NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILR-----------------------  158 (933)
T ss_pred             ---CCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchh-----------------------
Confidence               0000111   0  11111235678889999998999999999998887422110                       


Q ss_pred             CCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  438 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  438 (504)
                                |...+.              .-......+|+.+++..+++.++....-..|.+|.+.... ........+
T Consensus       159 ----------Drgsr~--------------~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~  213 (933)
T KOG2114|consen  159 ----------DRGSRQ--------------DYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT-PSLKVLDNN  213 (933)
T ss_pred             ----------ccccce--------------eeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCC-cceeeeccC
Confidence                      000000              0011235678888888888874433445679999988443 444456777


Q ss_pred             CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-ecCCceE
Q psy17188        439 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGAS  485 (504)
Q Consensus       439 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~  485 (504)
                      ...+.|..+++....+++++.. .+.+|+....+.-..+. +|.....
T Consensus       214 G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~~cfaf~~g~kk~~~  260 (933)
T KOG2114|consen  214 GISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRGPCFAFEVGEKKEML  260 (933)
T ss_pred             CccceeeecCCCCccEEEecCc-eEEEEcCCCcceeeeecCCCeEEEE
Confidence            7888888998766656655544 49999988766666666 6654433

>KOG1645|consensus

Probab=98.81  E-value=6.6e-07  Score=78.18  Aligned_cols=259  Identities=12%  Similarity=0.139  Sum_probs=144.6

Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC-CEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG-TKL  260 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l  260 (504)
                      +++.+..+.+  ....+..+...|..++|+|..+ ++..++.+..|+|.|+++...+..+..+ ..+.+++|.-|. ++|
T Consensus       175 v~~l~~~~fk--ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHDFK--SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCCcc--hhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCccee
Confidence            4444443332  2446778888899999999776 7888999999999999999999999877 889999998754 578


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE------EcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK------LLPDGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      ..|-..|.|.+||++..+-.+..+..            .....+|..++      ..+.|.+|+....+  +..|++...
T Consensus       252 YaGl~nG~VlvyD~R~~~~~~~e~~a------------~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s  317 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQPEGPLMELVA------------NVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFS  317 (463)
T ss_pred             EEeccCceEEEEEccCCCchHhhhhh------------hhccCcceeecccCccccccccceEEeeehh--hhhhhhhcc
Confidence            88889999999999976532211111            11122233222      23345555555443  455655433


Q ss_pred             Cccceeeec-cCCCceeeEEECCCCCCceeeeccCCC----------------eEEEEecCCCCCCCcccccccccCCCc
Q psy17188        335 TPRIKAELT-SSAPACYALAISPDSKSPFFSSHHYKS----------------CVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       335 ~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~----------------~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      ......... ...+.+.++...+..+. ++++...+.                .-.+|..+..-....  ..+.. ..  
T Consensus       318 ~~~~p~vlele~pG~cismqy~~~snh-~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~--~~kl~-t~--  391 (463)
T KOG1645|consen  318 AECLPCVLELEPPGICISMQYHGVSNH-LLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSK--QTKLS-TT--  391 (463)
T ss_pred             ccCCCcccccCCCcceeeeeecCccce-EEEEecCCCCCccceeeeeeeccccCceeeeecccccCCc--ccccc-cc--
Confidence            222222111 12334555555554444 333332210                011222111100000  00000 00  


Q ss_pred             eEEEEEcCCCCEEE-EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-C-CCEEEEeeCCCcEEEEEcC
Q psy17188        398 IRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-D-SKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       398 i~~~~~s~~g~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~-~~~l~s~~~dg~i~iwd~~  469 (504)
                       ..+.-.++.++++ ++...+.+.+||..+.+......+.   .+|..++... + +.+|++-. |..++||..+
T Consensus       392 -~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~---epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~e  461 (463)
T KOG1645|consen  392 -QAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALS---EPVLDICPNDTNGSSYLALLT-DDRVHIYKNE  461 (463)
T ss_pred             -cceeccccccEEEEecCCcceeEEeccchhheeeecccC---cceeecceeecCCcchhhhee-cceEEEEecC
Confidence             0122233445544 4555677999999988766655554   4565555433 2 34666554 5568888754

>KOG2695|consensus

Probab=98.81  E-value=2.9e-08  Score=84.57  Aligned_cols=149  Identities=15%  Similarity=0.232  Sum_probs=115.2

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeec
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTS  201 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~  201 (504)
                      .+-.+++|.+-.|-+-+++++....       +...+.|.++.|...++++..|..+|.|..+|++....  ......--
T Consensus       224 ~gyhfs~G~sqqv~L~nvetg~~qs-------f~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly  296 (425)
T KOG2695|consen  224 MGYHFSVGLSQQVLLTNVETGHQQS-------FQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY  296 (425)
T ss_pred             ceeeecccccceeEEEEeecccccc-------cccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE
Confidence            3445556668889999998863221       13567799999999999999999999999999986421  12333446


Q ss_pred             CcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeE---EEeecCCCCCeEEEE--EccCCCEEEEEcCCCeEEEEECC
Q psy17188        202 SAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL---VRQFQGHTDGASCID--ISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       202 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~~~--~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      |...|+++..-. ++++|.+.+.+|+|++||++--++   +.++.+|.+.-.-+-  ..+....+++++.|...|+|.++
T Consensus       297 h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~  376 (425)
T KOG2695|consen  297 HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD  376 (425)
T ss_pred             cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence            888899988777 778999999999999999987666   888888876544333  34566688999999999999999


Q ss_pred             CCce
Q psy17188        276 EGCV  279 (504)
Q Consensus       276 ~~~~  279 (504)
                      .+.+
T Consensus       377 ~ghL  380 (425)
T KOG2695|consen  377 SGHL  380 (425)
T ss_pred             cCce
Confidence            9875

>KOG4649|consensus

Probab=98.80  E-value=5e-05  Score=62.91  Aligned_cols=143  Identities=13%  Similarity=0.045  Sum_probs=89.6

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  204 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  204 (504)
                      .+++.|+ .+.+.--|.+++...-..      --...|.+-+.- -|++++.|...|.+++.+.+++.........+.-.
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~------ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk   96 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEA------ILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK   96 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeeh------hhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc
Confidence            3444555 566666666655321110      112233333322 47789999999999999999886433333222211


Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                       + .....+++.++..++.|++.+..|.++..++...+...+...+-++.|-...|..+...|.+.--..+..
T Consensus        97 -~-~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~  167 (354)
T KOG4649|consen   97 -V-RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPY  167 (354)
T ss_pred             -c-ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCC
Confidence             1 2334668889999999999999999999999887755554455666773335555666666665555554

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.80  E-value=2.3e-08  Score=58.94  Aligned_cols=39  Identities=41%  Similarity=0.704  Sum_probs=37.0

Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ++++.++++|.+.|.+++|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2695|consensus

Probab=98.78  E-value=3.6e-08  Score=84.03  Aligned_cols=159  Identities=14%  Similarity=0.170  Sum_probs=116.4

Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc--cc
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RI  338 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~  338 (504)
                      ++.+.+-.+-+-|+++|.-                 ......+.|.++.|...++.+..|+++|.|..+|++....  ..
T Consensus       228 fs~G~sqqv~L~nvetg~~-----------------qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~  290 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ-----------------QSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGW  290 (425)
T ss_pred             ecccccceeEEEEeecccc-----------------cccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCc
Confidence            5666778889999998852                 2233566788888998899999999999999999987622  22


Q ss_pred             eeeeccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        339 KAELTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      ....-.|...++++.... +++  .+.+.+.+|.|.+||++..+....+.....+-....-.-+...+....++++++|-
T Consensus       291 ~a~rlyh~Ssvtslq~Lq~s~q--~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDc  368 (425)
T KOG2695|consen  291 CAQRLYHDSSVTSLQILQFSQQ--KLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDC  368 (425)
T ss_pred             ceEEEEcCcchhhhhhhccccc--eEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCee
Confidence            333445677888888776 444  78888899999999999876655555444333333333445566777888999999


Q ss_pred             cEEEeeCCCCCcceeecccCC
Q psy17188        418 NLSIWDLASPTPRIKAELTSS  438 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~  438 (504)
                      ..+||.++.+.......++..
T Consensus       369 ytRiWsl~~ghLl~tipf~~s  389 (425)
T KOG2695|consen  369 YTRIWSLDSGHLLCTIPFPYS  389 (425)
T ss_pred             EEEEEecccCceeeccCCCCc
Confidence            999999999887766655543

>KOG1920|consensus

Probab=98.78  E-value=9.6e-06  Score=81.11  Aligned_cols=286  Identities=15%  Similarity=0.142  Sum_probs=158.4

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      .+..|.++.|..+...++.+..+|.|.+-|.++....   ....-...|.+++|+||+..++..+.++++.+-+ .+..+
T Consensus        67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e---ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~  142 (1265)
T KOG1920|consen   67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLELE---IVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEP  142 (1265)
T ss_pred             CCcceEEEEEecccceEEEEecCCcEEEEccccccee---eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccc
Confidence            3468999999999999999999999999988765432   2333456699999999999999998877776643 33322


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      +..-.-+      ..-.+.+ ..+.++....=.-+.-..|+....+...     ...........+.=.++.|--||+++
T Consensus       143 i~E~~L~------~d~~~~s-k~v~VGwGrkeTqfrgs~gr~~~~~~~~-----~ek~~~~~~~~~~~~~IsWRgDg~~f  210 (1265)
T KOG1920|consen  143 IAEKPLD------ADDERKS-KFVNVGWGRKETQFRGSEGRQAARQKIE-----KEKALEQIEQDDHKTSISWRGDGEYF  210 (1265)
T ss_pred             hhccccc------ccccccc-ccceecccccceeeecchhhhccccccc-----ccccccchhhccCCceEEEccCCcEE
Confidence            2221111      0111111 2233332221111111111110000000     00011111223334678999999999


Q ss_pred             EEE-----eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec---cCCCeEEEEecCCCCCCCccccc
Q psy17188        318 IVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH---HYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       318 ~~~-----~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      ++.     .....|++||.+ +.  ....-......-.+++|-|.|.  ++++-   ..++.|.+|.-.......  ..+
T Consensus       211 AVs~~~~~~~~RkirV~drE-g~--Lns~se~~~~l~~~LsWkPsgs--~iA~iq~~~sd~~IvffErNGL~hg~--f~l  283 (1265)
T KOG1920|consen  211 AVSFVESETGTRKIRVYDRE-GA--LNSTSEPVEGLQHSLSWKPSGS--LIAAIQCKTSDSDIVFFERNGLRHGE--FVL  283 (1265)
T ss_pred             EEEEEeccCCceeEEEeccc-ch--hhcccCcccccccceeecCCCC--eEeeeeecCCCCcEEEEecCCccccc--ccc
Confidence            984     223689999977 32  1122222233456789999877  44443   345578888765432211  111


Q ss_pred             ccccCCCceEEEEEcCCCCEEEE---eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC-CEEEEeeCCCcEEE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIV---GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAV  465 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~---~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~-~~l~s~~~dg~i~i  465 (504)
                      .......++..++|+.++..|++   ......|++|-+.+-....+....-.....  +.|+|.. ..|..-..+|...+
T Consensus       284 ~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v  361 (1265)
T KOG1920|consen  284 PFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLV  361 (1265)
T ss_pred             CCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEE
Confidence            12223344889999999999998   444455999998876544444433333222  5777732 22222225555555


Q ss_pred             EEc
Q psy17188        466 WDL  468 (504)
Q Consensus       466 wd~  468 (504)
                      +++
T Consensus       362 ~~~  364 (1265)
T KOG1920|consen  362 RDF  364 (1265)
T ss_pred             EEE
Confidence            443

>KOG1275|consensus

Probab=98.77  E-value=2.4e-07  Score=89.16  Aligned_cols=185  Identities=21%  Similarity=0.262  Sum_probs=133.9

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      ++..++.|+-...+..+|+.+.+......+  ....|+-++.  +++++++|...|+|.+-|.++.+.++++..|++.|.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v--~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siS  221 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNV--SASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSIS  221 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeec--cCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeecccccee
Confidence            455677787778888999987654333222  2333555554  678999999999999999999999999999999998


Q ss_pred             EEEEccCCCEEEEEcC---------CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEE
Q psy17188        250 CIDISADGTKLWTGGL---------DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIV  319 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~  319 (504)
                      .+...  |+.|++++.         |..|+|||++.-+.                +.-.+......-+.|.|. ...+++
T Consensus       222 DfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra----------------l~PI~~~~~P~flrf~Psl~t~~~V  283 (1118)
T KOG1275|consen  222 DFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA----------------LSPIQFPYGPQFLRFHPSLTTRLAV  283 (1118)
T ss_pred             eeecc--CCeEEEeecccccccccccchhhhhhhhhhhc----------------cCCcccccCchhhhhcccccceEEE
Confidence            87665  889999875         55689999987652                211222222345667774 457888


Q ss_pred             EeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        320 GGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       320 ~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      .+..|...+-|..+...  ............+..+.++++++  .++.+..+|.|.+|.-.
T Consensus       284 ~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~--alafgd~~g~v~~wa~~  342 (1118)
T KOG1275|consen  284 TSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGD--ALAFGDHEGHVNLWADR  342 (1118)
T ss_pred             EecccceeeccccccCCCccceeEEccCCCcceeEEecCCCc--eEEEecccCcEeeecCC
Confidence            88999999999433221  22233333444589999999999  89999999999999843

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.77  E-value=2.6e-06  Score=80.88  Aligned_cols=259  Identities=15%  Similarity=0.089  Sum_probs=141.6

Q ss_pred             CCCEEEEEeC-CCcEEEEECCCCeEEEeecC-CCCCeEEEEEc--cCCCEEEEEc------------------CCCeEEE
Q psy17188        214 DSKVCFSCCS-DGNIAVWDLHNQTLVRQFQG-HTDGASCIDIS--ADGTKLWTGG------------------LDNTVRS  271 (504)
Q Consensus       214 ~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~~~l~s~~------------------~dg~i~~  271 (504)
                      ||++|+.-.. +..|-..+++..++-+.+.- ....+..+.+.  |+-.+++.++                  ..+.+.+
T Consensus       140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv  219 (635)
T PRK02888        140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA  219 (635)
T ss_pred             ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence            7888888764 56677777776655444321 22223333332  3333333332                  2344555


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---C-cEEEEeCCCCCccceeeeccCCC
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---S-NLSIWDLASPTPRIKAELTSSAP  347 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~i~v~d~~~~~~~~~~~~~~~~~  347 (504)
                      .|..+.++                .....-......+.++++|+++++.+.+   + ++...+.....  ....+...  
T Consensus       220 ID~etmeV----------------~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d--~~vvfni~--  279 (635)
T PRK02888        220 VDAETMEV----------------AWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD--WVVVFNIA--  279 (635)
T ss_pred             EECccceE----------------EEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc--eEEEEchH--
Confidence            55554432                1112223345678899999999888632   2 23333322211  11111100  


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLAS  426 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~  426 (504)
                      .  ..++.++++..+ +   .++.|.+.|..+..... ........-......+.++|||+++++++. +.++.++|+.+
T Consensus       280 ~--iea~vkdGK~~~-V---~gn~V~VID~~t~~~~~-~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k  352 (635)
T PRK02888        280 R--IEEAVKAGKFKT-I---GGSKVPVVDGRKAANAG-SALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK  352 (635)
T ss_pred             H--HHHhhhCCCEEE-E---CCCEEEEEECCccccCC-cceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence            0  013345666422 2   26789999987610000 011122233455668999999999887665 88899999986


Q ss_pred             CCcce----------eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC----------cceEEEEeecCCceE-
Q psy17188        427 PTPRI----------KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----------QTLVRQFQGHTDGAS-  485 (504)
Q Consensus       427 ~~~~~----------~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~-  485 (504)
                      .+...          ..+..-.. .-...+|.++|+...+-.-|..|..|++.+          ...+.++.-|-.+-. 
T Consensus       353 ~k~~~~~~~~~~~~vvaevevGl-GPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~  431 (635)
T PRK02888        353 LDDLFDGKIKPRDAVVAEPELGL-GPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHN  431 (635)
T ss_pred             hhhhhhccCCccceEEEeeccCC-CcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCcccee
Confidence            54211          11111111 223458999999888888999999999876          344555554433221 


Q ss_pred             ----EEEEccCCCEEEEec
Q psy17188        486 ----CIDISADGTKLWTGG  500 (504)
Q Consensus       486 ----~~~~s~d~~~l~s~s  500 (504)
                          .=.-.|||++|++..
T Consensus       432 ~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        432 HASMGETKEADGKWLVSLN  450 (635)
T ss_pred             eecCCCcCCCCCCEEEEcc
Confidence                112378999998854

>KOG1832|consensus

Probab=98.76  E-value=3.1e-08  Score=94.71  Aligned_cols=198  Identities=16%  Similarity=0.260  Sum_probs=138.4

Q ss_pred             ccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        102 RHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       102 ~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      ...+.+..+ .|+...+|++|+-+.++|+.|. .|.|+++++.+|.......     .|...|+.+.-+.||..+++.+.
T Consensus      1089 SRFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~n-----cH~SavT~vePs~dgs~~Ltsss 1163 (1516)
T KOG1832|consen 1089 SRFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVN-----CHQSAVTLVEPSVDGSTQLTSSS 1163 (1516)
T ss_pred             hhcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccc-----ccccccccccccCCcceeeeecc
Confidence            344566666 7899999999999999999999 9999999999975544433     68899999999999998877654


Q ss_pred             CC--cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cC---CCCCeEEEEE
Q psy17188        180 AS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QG---HTDGASCIDI  253 (504)
Q Consensus       180 dg--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~  253 (504)
                      -.  -..+|++.+ .......+.    ...++.|+.....-+.|+......+||++++..+.++ .+   ..-.-++..|
T Consensus      1164 ~S~PlsaLW~~~s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~F 1238 (1516)
T KOG1832|consen 1164 SSSPLSALWDASS-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHF 1238 (1516)
T ss_pred             ccCchHHHhcccc-ccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhcccccc
Confidence            33  477999875 222233332    2467889876655566666678999999999877663 21   1122367889


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~  333 (504)
                      +|+..+++   .||  .+||.+..+.                +.....-..--.=.|+|.|+.++.-+     .|||+++
T Consensus      1239 sP~D~LIl---ndG--vLWDvR~~~a----------------Ih~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RT 1292 (1516)
T KOG1832|consen 1239 SPCDTLIL---NDG--VLWDVRIPEA----------------IHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRT 1292 (1516)
T ss_pred             CCCcceEe---eCc--eeeeeccHHH----------------HhhhhhheecccccccCCCceEEeec-----hhhhhHH
Confidence            99887766   344  5799886541                11111111112335899999988865     4899987


Q ss_pred             CC
Q psy17188        334 PT  335 (504)
Q Consensus       334 ~~  335 (504)
                      .+
T Consensus      1293 F~ 1294 (1516)
T KOG1832|consen 1293 FK 1294 (1516)
T ss_pred             HH
Confidence            63

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.71  E-value=0.00019  Score=69.83  Aligned_cols=303  Identities=13%  Similarity=0.110  Sum_probs=166.9

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--ce-------EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--AC-------YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v-------~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      +..|++++.++.|.-+|..+++............  ..       ..+++  .+..++.++.|+.|.-.|.++|+.+...
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            4456666677788888888777554443322111  00       01122  2346777888999999999999998876


Q ss_pred             cCCCCC-eEEEEEcc---CCCEEEEEc------CCCeEEEEECCCCceEEEeecCCCCCCC------------------c
Q psy17188        242 QGHTDG-ASCIDISA---DGTKLWTGG------LDNTVRSWDLREGCVKVWDISQPGSKTP------------------V  293 (504)
Q Consensus       242 ~~h~~~-v~~~~~~~---~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~~------------------~  293 (504)
                      ...... -..+.-+|   ++ .++.+.      .+|.|..+|.++|+. +|..........                  .
T Consensus       147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~-lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~  224 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKL-VWRRYTVPGDMGYLDKADKPVGGEPGAKTWP  224 (527)
T ss_pred             ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCce-eEeccCcCCCcccccccccccccccccCCCC
Confidence            531110 01111122   34 455543      368999999999984 565443221100                  0


Q ss_pred             ccceecccCCceEEEEEcCCCCEEEEEeCC-----C-----------cEEEEeCCCCCccceeeeccCCC-------cee
Q psy17188        294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----S-----------NLSIWDLASPTPRIKAELTSSAP-------ACY  350 (504)
Q Consensus       294 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g-----------~i~v~d~~~~~~~~~~~~~~~~~-------~i~  350 (504)
                      ...........=..+++.++..+++.+..+     +           .|.-.|+++++.+...+...|..       ...
T Consensus       225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~  304 (527)
T TIGR03075       225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMI  304 (527)
T ss_pred             CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcE
Confidence            000000111111245777777777776522     2           56777888887665555444321       112


Q ss_pred             eEEECCCCC-CceeeeccCCCeEEEEecCCCCCCCccc---------ccccc----------------cCCC--------
Q psy17188        351 ALAISPDSK-SPFFSSHHYKSCVKVWDISQPGSKTPVS---------QLDCL----------------QRDN--------  396 (504)
Q Consensus       351 ~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~---------~~~~~----------------~~~~--------  396 (504)
                      -+.+..+++ ..+++.+..+|.+.+.|.++++......         .+...                ....        
T Consensus       305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~  384 (527)
T TIGR03075       305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFL  384 (527)
T ss_pred             EEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCc
Confidence            222323443 2377788999999999998765421100         00000                0000        


Q ss_pred             ---ceEEEEEcCCCCEEEEeeCC---------------------------------CcEEEeeCCCCCcceeecccCCCC
Q psy17188        397 ---YIRSVKLLPDGRTLIVGGEA---------------------------------SNLSIWDLASPTPRIKAELTSSAP  440 (504)
Q Consensus       397 ---~i~~~~~s~~g~~l~~~~~d---------------------------------g~i~iwd~~~~~~~~~~~~~~~~~  440 (504)
                         .-..++++|+..++++...+                                 |.|.-+|+.+++.+......... 
T Consensus       385 Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~-  463 (527)
T TIGR03075       385 GGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPL-  463 (527)
T ss_pred             CCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCC-
Confidence               01126677766666554333                                 34667777777665554432211 


Q ss_pred             ceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec
Q psy17188        441 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  480 (504)
Q Consensus       441 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h  480 (504)
                       ... .+.-.+.+++.++.||.++.+|.++|+.+.+.+-.
T Consensus       464 -~~~-~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       464 -WGG-VLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             -CCc-ceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence             111 11124567778888999999999999999888754

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.69  E-value=1.5e-05  Score=74.04  Aligned_cols=111  Identities=19%  Similarity=0.284  Sum_probs=81.1

Q ss_pred             eEEEEECC-CCCEEEEE----eCCCc----EEEEECCCCeE----EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        206 CYALAISP-DSKVCFSC----CSDGN----IAVWDLHNQTL----VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       206 v~~~~~s~-~~~~l~~~----~~dg~----i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ..++.|+- +...+.+.    +.+|.    -++|++...+.    +..+. ....|.+++++|+...|+.|+.||.|.+|
T Consensus       208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsip-L~s~v~~ca~sp~E~kLvlGC~DgSiiLy  286 (545)
T PF11768_consen  208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIP-LPSQVICCARSPSEDKLVLGCEDGSIILY  286 (545)
T ss_pred             cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEe-cCCcceEEecCcccceEEEEecCCeEEEE
Confidence            35677776 33445443    23443    35677665432    22233 77889999999999999999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      |...+...                 .....-.++.++|+|+|..+++|+..|.+.+||+.-.
T Consensus       287 D~~~~~t~-----------------~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  287 DTTRGVTL-----------------LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             EcCCCeee-----------------eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            99877422                 1233445789999999999999999999999998654

>KOG1008|consensus

Probab=98.68  E-value=2.9e-08  Score=91.57  Aligned_cols=205  Identities=18%  Similarity=0.316  Sum_probs=139.5

Q ss_pred             CCceEEEEEccCC--CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEe----CCCcEEEEE
Q psy17188        159 DNYIRSVKLLPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCC----SDGNIAVWD  231 (504)
Q Consensus       159 ~~~v~~~~~s~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----~dg~i~iwd  231 (504)
                      ...+.|+++.-+.  ..+++|..+|.|.+-.+...........+++...+++++|++ |.+.||+|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            4456677766543  478889999999999887655443445677888999999998 556777764    366799999


Q ss_pred             CCCC----eEEEeecC-CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        232 LHNQ----TLVRQFQG-HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       232 ~~~~----~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      +.++    +.-..+.+ ......+++|..+.+++++|.....+.++|++......                ..-....+.
T Consensus       136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~----------------~svnTk~vq  199 (783)
T KOG1008|consen  136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV----------------SSVNTKYVQ  199 (783)
T ss_pred             cccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhh----------------hhhhhhhcc
Confidence            9876    11122222 33456688999888899999999999999998543210                111123466


Q ss_pred             EEEEcC-CCCEEEEEeCCCcEEEEeC-CCCCcccee---eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        307 SVKLLP-DGRTLIVGGEASNLSIWDL-ASPTPRIKA---ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       307 ~~~~~~-~~~~l~~~~~dg~i~v~d~-~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .+.++| .+++++.-. ||.|.+||. .+-+.....   ........+..++|+|-....+.+.....++|+.+|+...
T Consensus       200 G~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v  277 (783)
T KOG1008|consen  200 GITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV  277 (783)
T ss_pred             cceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence            778888 677776654 899999994 322211111   1112223588999999887755566666789999998643

>KOG3621|consensus

Probab=98.66  E-value=7.4e-06  Score=77.18  Aligned_cols=118  Identities=15%  Similarity=0.225  Sum_probs=92.1

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      +...|.--+++..+++|+.|+.-|.+++|+-..++.. .....+....+..+..+++..++|.|+..|.|.++-+..+..
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence            4555666677788999999999999999997766543 333333455567778899888999999999999998876421


Q ss_pred             -----EEee-cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        238 -----VRQF-QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       238 -----~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                           +... +.|...|++++|++++..+++|...|+|..-.++.
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                 1111 23788999999999999999999999999988877

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.66  E-value=1.2e-05  Score=71.98  Aligned_cols=281  Identities=17%  Similarity=0.217  Sum_probs=133.9

Q ss_pred             ceEEEEEccCCCEEEEecC---CCcEEEEeCCCCCccceeeeecCc-CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        161 YIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      ..+.=+|.+||+.|+.++.   ..++.+.|+.+++.   ..+.... .......++++++.++-...+..|+-.|+++.+
T Consensus        37 YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i---~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e  113 (386)
T PF14583_consen   37 YFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEI---TQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE  113 (386)
T ss_dssp             -TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EE---EE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--
T ss_pred             eecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEE---EECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc
Confidence            3334467889987777654   44577778887653   3333322 222346677888888766666789999999988


Q ss_pred             EEEeecCCCCCeEEEEEc--cCCCEEEEEcC----------------------CCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188        237 LVRQFQGHTDGASCIDIS--ADGTKLWTGGL----------------------DNTVRSWDLREGCVKVWDISQPGSKTP  292 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~----------------------dg~i~~wd~~~~~~~~~~~~~~~~~~~  292 (504)
                      ....+......+-...|.  .|+..++-.-.                      ...|...|+.+|+.+            
T Consensus       114 ~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~------------  181 (386)
T PF14583_consen  114 ERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERK------------  181 (386)
T ss_dssp             EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EE------------
T ss_pred             EEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCcee------------
Confidence            766666666666556664  35555443211                      134555566666532            


Q ss_pred             cccceecccCCceEEEEEcCCCC-EEEEEeC---CC-cEEEEeCCC--CCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGR-TLIVGGE---AS-NLSIWDLAS--PTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~---dg-~i~v~d~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                          ........+..+.|+|... .|+.+-+   +. .-++|-+++  .......+. .....+..=-|.|||..+.+..
T Consensus       182 ----~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~-~~~e~~gHEfw~~DG~~i~y~~  256 (386)
T PF14583_consen  182 ----VVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRR-MEGESVGHEFWVPDGSTIWYDS  256 (386)
T ss_dssp             ----EEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS-EEEEE
T ss_pred             ----EEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecC-CCCcccccccccCCCCEEEEEe
Confidence                2334556678899999554 4444432   11 135565443  222222221 2234556667899999766654


Q ss_pred             cc---CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC----------------cEEEeeCCC
Q psy17188        366 HH---YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----------------NLSIWDLAS  426 (504)
Q Consensus       366 ~~---~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg----------------~i~iwd~~~  426 (504)
                      ..   .+..|.-+|..+.+... +.      ....-..+-.++||++++-=+.|.                -|++++++.
T Consensus       257 ~~~~~~~~~i~~~d~~t~~~~~-~~------~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~  329 (386)
T PF14583_consen  257 YTPGGQDFWIAGYDPDTGERRR-LM------EMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEA  329 (386)
T ss_dssp             EETTT--EEEEEE-TTT--EEE-EE------EE-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTT
T ss_pred             ecCCCCceEEEeeCCCCCCceE-EE------eCCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEecccc
Confidence            42   34456667766543211 11      111234666778998776433321                466777776


Q ss_pred             CCcceeecc-------cCCCC-ceeEEEECCCCCEEEEe-eCCCcEEEEEc
Q psy17188        427 PTPRIKAEL-------TSSAP-ACYALAISPDSKVCFSC-CSDGNIAVWDL  468 (504)
Q Consensus       427 ~~~~~~~~~-------~~~~~-~v~~l~~s~~~~~l~s~-~~dg~i~iwd~  468 (504)
                      +........       .++.. .=....|+||+++|+.. ...|...||-+
T Consensus       330 ~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v  380 (386)
T PF14583_consen  330 GRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV  380 (386)
T ss_dssp             TEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred             CceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence            543322211       10000 01235999999988755 45677666643

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.64  E-value=1.5e-05  Score=75.88  Aligned_cols=226  Identities=15%  Similarity=0.130  Sum_probs=130.3

Q ss_pred             CCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEE-------------------ccCCCEEEEe-cCC
Q psy17188        123 NPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL-------------------LPDGRTLIVG-GEA  180 (504)
Q Consensus       123 ~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------------------s~~~~~l~~~-~~d  180 (504)
                      -||++|..-.  +..|...+++.-+..+.+..    .....+..++|                   +|||+.+... -..
T Consensus       139 ydGr~~findk~n~Rvari~l~~~~~~~i~~i----Pn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~  214 (635)
T PRK02888        139 YDGRYLFINDKANTRVARIRLDVMKCDKITEL----PNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYR  214 (635)
T ss_pred             cceeEEEEecCCCcceEEEECccEeeceeEeC----CCccCccccCccccCCccEEEeCcccccccCCCCCEeeccccee
Confidence            3789998887  66777777765433332221    22223333333                   3455444222 223


Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                      +.+.+.|.++.+........+   ....+.++++++++++.+.+    .++...+..+...+..+.-.  .+  -++.++
T Consensus       215 ~~vSvID~etmeV~~qV~Vdg---npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~--~i--ea~vkd  287 (635)
T PRK02888        215 SLFTAVDAETMEVAWQVMVDG---NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA--RI--EEAVKA  287 (635)
T ss_pred             EEEEEEECccceEEEEEEeCC---CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH--HH--HHhhhC
Confidence            456666766544322222222   23557889999998887632    22333333222222222100  00  023456


Q ss_pred             CCEEEEEcCCCeEEEEECCC----CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeC
Q psy17188        257 GTKLWTGGLDNTVRSWDLRE----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDL  331 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~  331 (504)
                      |++...  .++.|.+.|..+    +.-               ......-......+.++|||+++++++. +.++.|+|+
T Consensus       288 GK~~~V--~gn~V~VID~~t~~~~~~~---------------v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv  350 (635)
T PRK02888        288 GKFKTI--GGSKVPVVDGRKAANAGSA---------------LTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDV  350 (635)
T ss_pred             CCEEEE--CCCEEEEEECCccccCCcc---------------eEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEC
Confidence            776655  367899999887    211               2333344566788999999999887754 789999999


Q ss_pred             CCCCccc----------eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        332 ASPTPRI----------KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       332 ~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .+.+...          ..+..- .......+|.+++.  .+.+-.-|..|..|++..
T Consensus       351 ~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~--aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        351 RKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGN--AYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             hhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCC--EEEeEeecceeEEEehHH
Confidence            8754211          111111 22445677888876  888888999999999875

>KOG1645|consensus

Probab=98.63  E-value=4.7e-06  Score=73.00  Aligned_cols=253  Identities=14%  Similarity=0.088  Sum_probs=140.8

Q ss_pred             EEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI  305 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  305 (504)
                      +++.+..+.+....+.+|...|.+++|+|..+ ++..++.+.+|++.|+++..+                .........+
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~----------------vssy~a~~~~  238 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCV----------------VSSYIAYNQI  238 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEeccccee----------------eeheeccCCc
Confidence            66666666666667778889999999999766 788999999999999998764                2223334779


Q ss_pred             EEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeec-cCCCceeeEEECC------CCCCceeeeccCCCeEEEEec
Q psy17188        306 RSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISP------DSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       306 ~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~------~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      .+++|+-+. ++++.|..+|.|.+||++..+........ ....++..++.-+      .+.  +++....  .+..|++
T Consensus       239 wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gg--lLv~~lt--~l~f~ei  314 (463)
T KOG1645|consen  239 WSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGG--LLVFALT--VLQFYEI  314 (463)
T ss_pred             eeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccc--eEEeeeh--hhhhhhh
Confidence            999999865 56788889999999999876543222111 1222344333322      222  2222211  2344554


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-Cc------EEE-eeCCCCCcceeecccC---CCC---cee
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SN------LSI-WDLASPTPRIKAELTS---SAP---ACY  443 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~------i~i-wd~~~~~~~~~~~~~~---~~~---~v~  443 (504)
                      .......  .........+...+++..+-.+.++..... ..      |-. -|..++.+++......   ...   .-.
T Consensus       315 ~~s~~~~--p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~  392 (463)
T KOG1645|consen  315 VFSAECL--PCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQ  392 (463)
T ss_pred             hccccCC--CcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCccccccccc
Confidence            3221111  111111224444556666544444433221 10      111 1112222222111000   000   001


Q ss_pred             EEEECCCCCEEE-EeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc--CCCEEEEecCC
Q psy17188        444 ALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA--DGTKLWTGGLD  502 (504)
Q Consensus       444 ~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~--d~~~l~s~s~D  502 (504)
                      .+.-.++.++++ +++....+.+||..+.+.++++.- +.+|.++....  .+.+|++-.+|
T Consensus       393 ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~LTd~  453 (463)
T KOG1645|consen  393 AIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALLTDD  453 (463)
T ss_pred             ceeccccccEEEEecCCcceeEEeccchhheeeeccc-CcceeecceeecCCcchhhheecc
Confidence            122244556665 555667899999999999999874 47787776543  24466655444

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.61  E-value=1.4e-05  Score=74.28  Aligned_cols=154  Identities=12%  Similarity=0.141  Sum_probs=99.7

Q ss_pred             CCCceEEEEEcc-CCCEEEEe----cCCCc----EEEEeCCCCCcccee-eeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188        158 RDNYIRSVKLLP-DGRTLIVG----GEASN----LSIWDLASPTPRIKA-ELTSSAPACYALAISPDSKVCFSCCSDGNI  227 (504)
Q Consensus       158 ~~~~v~~~~~s~-~~~~l~~~----~~dg~----i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  227 (504)
                      -+....++.||- +...+.+.    +.+|.    -++|++...+.+... .--.....+.+++++|+.+.|+.|+.||+|
T Consensus       204 TE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSi  283 (545)
T PF11768_consen  204 TENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSI  283 (545)
T ss_pred             ecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeE
Confidence            344556777876 34444443    33443    456777655433221 122455679999999999999999999999


Q ss_pred             EEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC-cccceecccCCceE
Q psy17188        228 AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP-VSQLDCLQRDNYIR  306 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~  306 (504)
                      .+||...+.....  ...-.++.++|+|+|..+++|+..|.+.+||+.-..+..--......+.. +.......+.....
T Consensus       284 iLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~~L~  361 (545)
T PF11768_consen  284 ILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQLSKYFRVSSSLV  361 (545)
T ss_pred             EEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccceeeccccCCCccEEeeehhccCcchhh
Confidence            9999887743322  34556789999999999999999999999999877654433322211111 11112223445566


Q ss_pred             EEEEcCC
Q psy17188        307 SVKLLPD  313 (504)
Q Consensus       307 ~~~~~~~  313 (504)
                      .+.|.+.
T Consensus       362 ~iqW~~~  368 (545)
T PF11768_consen  362 HIQWAPA  368 (545)
T ss_pred             eeEeccC
Confidence            7777754

>KOG2066|consensus

Probab=98.61  E-value=4.9e-06  Score=79.45  Aligned_cols=188  Identities=15%  Similarity=0.172  Sum_probs=128.9

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      ..++|++++  ++.|+.|+.+|.|++++.... . .+...|...      ..+|.++++|+.||++.+-.+-+.+     
T Consensus        40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~-----  104 (846)
T KOG2066|consen   40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDD-----  104 (846)
T ss_pred             hHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCc-----
Confidence            345666664  558999999999999996543 3 333445544      5679999999999999999888776     


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCC-----CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-----GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                                 .........++.+++++|+     .+.+++|+..| +.++.-+-........+....++|.++.|..+ 
T Consensus       105 -----------~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g~-  171 (846)
T KOG2066|consen  105 -----------EITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRGN-  171 (846)
T ss_pred             -----------cceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecCc-
Confidence                       4444566778999999997     57899998888 77776443333333456677789999999876 


Q ss_pred             CCceeeeccCCCeEEEEecCCCCCCCcccccc-cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD-CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                         +++ -..|--|++||.........+.... ..........+.|.++.+ |+.| ...+|+|..++
T Consensus       172 ---lIA-Wand~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~~I~  233 (846)
T KOG2066|consen  172 ---LIA-WANDDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKICSIK  233 (846)
T ss_pred             ---EEE-EecCCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEe-cCCeEEEEEEe
Confidence               444 4456669999998764433332221 111223345788887654 5555 44568888877

>KOG2066|consensus

Probab=98.60  E-value=3.9e-06  Score=80.06  Aligned_cols=174  Identities=14%  Similarity=0.180  Sum_probs=117.9

Q ss_pred             CCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCc
Q psy17188         83 GQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNY  161 (504)
Q Consensus        83 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~  161 (504)
                      ++.++++...+.+.+...+...  ...+.|+..      ..+|.++++|+ ||+|.|-.+.+.+.....      .-..+
T Consensus        49 ~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~------df~rp  114 (846)
T KOG2066|consen   49 DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY------DFKRP  114 (846)
T ss_pred             cceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE------ecCCc
Confidence            4466666666666655444333  223344433      55799999999 999999998775433222      34678


Q ss_pred             eEEEEEccC-----CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        162 IRSVKLLPD-----GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       162 v~~~~~s~~-----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +.+++++|+     .+.+++|+..| +.++.-.--.......+..-.++|.++.|  .|+++|-++.+| |++||+.+++
T Consensus       115 iksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~  190 (846)
T KOG2066|consen  115 IKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQ  190 (846)
T ss_pred             ceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccc
Confidence            999999997     67899999888 87776432222223356667888999999  466888887766 9999999998


Q ss_pred             EEEeecCCCCCe------EEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        237 LVRQFQGHTDGA------SCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       237 ~~~~~~~h~~~v------~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                      .+..++.....+      ..+.|.++. .|+.|- .-+|++..++.
T Consensus       191 ~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW-~d~v~i~~I~~  234 (846)
T KOG2066|consen  191 RLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGW-GDSVKICSIKK  234 (846)
T ss_pred             eeeccCCCCCCCCcccCCCceEecCCC-eEEEec-CCeEEEEEEec
Confidence            887776433332      356777654 455554 44788887773

>KOG2114|consensus

Probab=98.58  E-value=4.9e-06  Score=80.03  Aligned_cols=191  Identities=11%  Similarity=0.171  Sum_probs=123.4

Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC----eEEEEecCCCCCC
Q psy17188        308 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS----CVKVWDISQPGSK  383 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~i~i~d~~~~~~~  383 (504)
                      -+|++.+..++.|+.+|.|.+++-.-   .....+..+...+...-+.-+++..++..+-.++    .+++|+++.....
T Consensus        29 sc~~s~~~~vvigt~~G~V~~Ln~s~---~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n  105 (933)
T KOG2114|consen   29 SCCSSSTGSVVIGTADGRVVILNSSF---QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN  105 (933)
T ss_pred             eEEcCCCceEEEeeccccEEEecccc---eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence            35778889999999999988887432   2223444444343333333344333444444444    6999999865333


Q ss_pred             C-ccc-------ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        384 T-PVS-------QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       384 ~-~~~-------~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      . +..       .........++.+++.+.+-+.+|+|-.+|.|..+.-+  ..+............+|+.+++..+++.
T Consensus       106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s  185 (933)
T KOG2114|consen  106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKS  185 (933)
T ss_pred             CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCce
Confidence            2 111       11122246678899999999999999999999988532  1111222333455678999999999988


Q ss_pred             EEEeeCCCcEEEEEcCCcce-EEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        454 CFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       454 l~s~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ++.+..-..|.+|.+....+ ...+..|....+|..|++....+++++.
T Consensus       186 ~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~  234 (933)
T KOG2114|consen  186 VLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS  234 (933)
T ss_pred             eEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC
Confidence            44444456699999985442 4557777788999999986664666554

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.57  E-value=0.0003  Score=65.75  Aligned_cols=265  Identities=19%  Similarity=0.233  Sum_probs=164.0

Q ss_pred             ceEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEEE
Q psy17188        205 ACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      ....+...+++..+.... ....+...+............-...-..++.++.++.+ ++...++.|.+.|..+...   
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~---  108 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTV---  108 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccce---
Confidence            345677888886444443 22245555555222222222111344677888887744 4455568999999666553   


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                                   ............++++++++.+.++..   ++.+.+.|..+.+....  ......+ ..+++.|+++
T Consensus       109 -------------~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~--~~vG~~P-~~~a~~p~g~  172 (381)
T COG3391         109 -------------LGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT--IPVGNTP-TGVAVDPDGN  172 (381)
T ss_pred             -------------eeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE--EecCCCc-ceEEECCCCC
Confidence                         222222236778999999988888765   57788888777643333  3322223 8999999999


Q ss_pred             CceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCcceeeccc
Q psy17188        360 SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       360 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~  436 (504)
                      . ++++...++.+.+.|........ -..............+.++|+|.++.+....   +.+...|..++.........
T Consensus       173 ~-vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~  250 (381)
T COG3391         173 K-VYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPV  250 (381)
T ss_pred             e-EEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEecccc
Confidence            7 44455788999999976543322 1111112233445589999999987776554   48888888876543331222


Q ss_pred             CCCCceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEeecCC---ceEEEEEcc
Q psy17188        437 SSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTD---GASCIDISA  491 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~s~  491 (504)
                      ... ....+..+|+|+++.+... .+.+.+.|..+.+....+.....   .+..+++.+
T Consensus       251 ~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~  308 (381)
T COG3391         251 GSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP  308 (381)
T ss_pred             ccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence            222 3455699999999888744 48899999988887776554332   344555544

>KOG4649|consensus

Probab=98.55  E-value=0.0002  Score=59.45  Aligned_cols=105  Identities=14%  Similarity=0.103  Sum_probs=76.6

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEE
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC  250 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~  250 (504)
                      ..+++.|+..+.+.--|..+++......+...   +.+-+.- -|++++.|+..|.+++.+.++|.....+.....-=..
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~R---iE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~   98 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVR---IECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR   98 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhhCce---eeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence            45677788888888889888876544444332   2222221 4568999999999999999999888877643322233


Q ss_pred             EEEccCCCEEEEEcCCCeEEEEECCCCce
Q psy17188        251 IDISADGTKLWTGGLDNTVRSWDLREGCV  279 (504)
Q Consensus       251 ~~~~~~~~~l~s~~~dg~i~~wd~~~~~~  279 (504)
                      ....+++..+..++.|++.+..|.++...
T Consensus        99 a~~d~~~glIycgshd~~~yalD~~~~~c  127 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDGNFYALDPKTYGC  127 (354)
T ss_pred             eEEcCCCceEEEecCCCcEEEecccccce
Confidence            45567888999999999999999988664

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.53  E-value=0.0003  Score=63.32  Aligned_cols=297  Identities=16%  Similarity=0.158  Sum_probs=132.4

Q ss_pred             CccccceeeecCCCcEEE------EEEcCCCcEEEEe-c-CC--eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC
Q psy17188        101 PRHARQINTLSHGEVVCA------VTISNPTKYVYTG-G-KG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  170 (504)
Q Consensus       101 ~~~~~~~~~~~h~~~V~~------v~~s~~~~~l~~~-~-d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  170 (504)
                      +..+.++.++.+....+.      =+|.+||+.|+.+ . ||  .+.+.|++++    .+.++..... .......++|+
T Consensus        17 ~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~----~i~QLTdg~g-~~~~g~~~s~~   91 (386)
T PF14583_consen   17 PDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATG----EITQLTDGPG-DNTFGGFLSPD   91 (386)
T ss_dssp             TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-----EEEE---SS--B-TTT-EE-TT
T ss_pred             CCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccC----EEEECccCCC-CCccceEEecC
Confidence            445555555543333333      3466788655544 4 44  5666677764    2333332222 22225677888


Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE--CCCCCEEEEEeC----------------------CCc
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKVCFSCCS----------------------DGN  226 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~----------------------dg~  226 (504)
                      .+.++....+..|+-.|+++.+...+..++  ...+-...|  +.|+..++-.-.                      ...
T Consensus        92 ~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p--~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~  169 (386)
T PF14583_consen   92 DRALYYVKNGRSLRRVDLDTLEERVVYEVP--DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCR  169 (386)
T ss_dssp             SSEEEEEETTTEEEEEETTT--EEEEEE----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EE
T ss_pred             CCeEEEEECCCeEEEEECCcCcEEEEEECC--cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCce
Confidence            888877666678999999987755444444  333433455  345655543211                      234


Q ss_pred             EEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEEcC---CC-eEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGL---DN-TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~---dg-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      |.-.|+.+|+....+. -...+..+.|+|. ...|+.|-+   |. .-|+|-+++..-..+            .+.....
T Consensus       170 i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~------------~v~~~~~  236 (386)
T PF14583_consen  170 IFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVK------------KVHRRME  236 (386)
T ss_dssp             EEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---E------------ESS---T
T ss_pred             EEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcce------------eeecCCC
Confidence            6677888887655555 5667888999994 445555432   22 135554443321111            1111122


Q ss_pred             CCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC------
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS------  370 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------  370 (504)
                      ...+..=-|.|||..|..-+.     +..|.-+|..+.+.......+    ....+..++|++  +++.-+.|.      
T Consensus       237 ~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p----~~~H~~ss~Dg~--L~vGDG~d~p~~v~~  310 (386)
T PF14583_consen  237 GESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP----WCSHFMSSPDGK--LFVGDGGDAPVDVAD  310 (386)
T ss_dssp             TEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE-----SEEEEEE-TTSS--EEEEEE---------
T ss_pred             CcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC----ceeeeEEcCCCC--EEEecCCCCCccccc
Confidence            333445568999987765322     335677788776543322222    345666778877  554433332      


Q ss_pred             ----------eEEEEecCCCCCCCcccc---cccccCCC--ceEEEEEcCCCCEEEEe-eCCCcEEEee
Q psy17188        371 ----------CVKVWDISQPGSKTPVSQ---LDCLQRDN--YIRSVKLLPDGRTLIVG-GEASNLSIWD  423 (504)
Q Consensus       371 ----------~i~i~d~~~~~~~~~~~~---~~~~~~~~--~i~~~~~s~~g~~l~~~-~~dg~i~iwd  423 (504)
                                -|.+++............   .....+..  .=....|+|||++++.. ...|...||-
T Consensus       311 ~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~  379 (386)
T PF14583_consen  311 AGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYL  379 (386)
T ss_dssp             ----------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEE
T ss_pred             cccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEE
Confidence                      355566654321110000   00000000  11378999999987654 4566665553

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.53  E-value=3.5e-07  Score=53.81  Aligned_cols=37  Identities=32%  Similarity=0.497  Sum_probs=34.7

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      ....+.+|...|++++|+|++++|++++.|+.|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4677899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG3621|consensus

Probab=98.51  E-value=3.2e-05  Score=73.06  Aligned_cols=161  Identities=12%  Similarity=0.093  Sum_probs=107.7

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCc
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTP  149 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~  149 (504)
                      .+++.-.++..++.++++.+.+.++++......-++... +-.+.++.+.++++..++|+|+ .|.|.++.+........
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence            456666666788899999999999988765555444444 4456667778889899998888 88999998877433322


Q ss_pred             eeeeee-cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC-c-cceeeeecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        150 VSQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-P-RIKAELTSSAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       150 ~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      .....+ ..|...|++++|++|+..+++|...|+|.+-.++... . .....+......|..+... ++.+|++....  
T Consensus       114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLVStl~r--  190 (726)
T KOG3621|consen  114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLVSTLTR--  190 (726)
T ss_pred             eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehHhhhhh--
Confidence            222211 1368899999999999999999999999998887621 0 1123334445667777665 33344443332  


Q ss_pred             EEEEECCCC
Q psy17188        227 IAVWDLHNQ  235 (504)
Q Consensus       227 i~iwd~~~~  235 (504)
                      -.+++.+.+
T Consensus       191 ~~Lc~tE~e  199 (726)
T KOG3621|consen  191 CILCQTEAE  199 (726)
T ss_pred             hheeecchh
Confidence            344554443

>KOG1897|consensus

Probab=98.50  E-value=0.0014  Score=64.92  Aligned_cols=349  Identities=13%  Similarity=0.112  Sum_probs=178.3

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC--C----CEEEEecCCCcEEEEeCCC-CCccce
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--G----RTLIVGGEASNLSIWDLAS-PTPRIK  196 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~----~~l~~~~~dg~i~iw~~~~-~~~~~~  196 (504)
                      ..+.+++++++.+...++..+.    +.......-+..|.|+.++|-  +    +++++|..+..+.+.-... ......
T Consensus       499 ~sqVvvA~~~~~l~y~~i~~~~----l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~  574 (1096)
T KOG1897|consen  499 ASQVVVAGGGLALFYLEIEDGG----LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITH  574 (1096)
T ss_pred             ceEEEEecCccEEEEEEeeccc----eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeee
Confidence            3445555556777767766543    222222234678999999983  2    3788888776655544322 111111


Q ss_pred             eeee--cCcCceEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEee--cCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        197 AELT--SSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HNQTLVRQF--QGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       197 ~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                      ..+.  .-...|.-..|-.|..+|.++..||.+.-+.+  .+++.-..-  .--..++.=-.|+..++.-+.+..|+-..
T Consensus       575 ~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~v  654 (1096)
T KOG1897|consen  575 EQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTV  654 (1096)
T ss_pred             eccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEE
Confidence            1121  12334555666667889999999999876654  444332222  11334555555665544444444455555


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      +|.-+ +++..-.+.-          ....+   +  ..|+.  -...|+.+ ..+.+.+..+..-+.......+-+ ..
T Consensus       655 iY~~n-~kLv~spls~----------kev~~---~--c~f~s~a~~d~l~~~-~~~~l~i~tid~iqkl~irtvpl~-~~  716 (1096)
T KOG1897|consen  655 IYSSN-GKLVYSPLSL----------KEVNH---M--CPFNSDAYPDSLASA-NGGALTIGTIDEIQKLHIRTVPLG-ES  716 (1096)
T ss_pred             EEecC-CcEEEeccch----------HHhhh---h--cccccccCCceEEEe-cCCceEEEEecchhhcceeeecCC-CC
Confidence            55433 2222111100          00000   1  11221  12334444 344566665554333333332222 23


Q ss_pred             eeeEEECCCCCCceeeecc-----------CC---CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC-CCEEEEe
Q psy17188        349 CYALAISPDSKSPFFSSHH-----------YK---SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVG  413 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~-----------~~---~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~~l~~~  413 (504)
                      ...+++.+...  .+.+.+           .+   ..++++|-.+-.... ..++........+.++.|..| +.++++|
T Consensus       717 prrI~~q~~sl--~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~-~hef~~~E~~~Si~s~~~~~d~~t~~vVG  793 (1096)
T KOG1897|consen  717 PRRICYQESSL--TFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLS-SHEFERNETALSIISCKFTDDPNTYYVVG  793 (1096)
T ss_pred             hhheEecccce--EEEEEecccccchhhcCCcceEEEEEEecCCceeEEe-eccccccceeeeeeeeeecCCCceEEEEE
Confidence            44455544222  222211           11   235556544321111 111111112233556668877 7788887


Q ss_pred             eC----------CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc
Q psy17188        414 GE----------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG  483 (504)
Q Consensus       414 ~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~  483 (504)
                      +.          .|.|.+|.....+.+.......-.+.+.++..- +|++||.-  +..|++|+..+.+.++.-..|..+
T Consensus       794 T~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~  870 (1096)
T KOG1897|consen  794 TGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGI--NQSVRLYEWTTERELRIECNISNP  870 (1096)
T ss_pred             EEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEec--CcEEEEEEccccceehhhhcccCC
Confidence            52          577888888763333332222233444444322 56776644  567999999998777766677788


Q ss_pred             eEEEEEccCCCEEEEec
Q psy17188        484 ASCIDISADGTKLWTGG  500 (504)
Q Consensus       484 v~~~~~s~d~~~l~s~s  500 (504)
                      +..+...-.|..++.|.
T Consensus       871 ~~aL~l~v~gdeI~VgD  887 (1096)
T KOG1897|consen  871 IIALDLQVKGDEIAVGD  887 (1096)
T ss_pred             eEEEEEEecCcEEEEee
Confidence            88888887787887765

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.49  E-value=3.1e-05  Score=72.38  Aligned_cols=230  Identities=16%  Similarity=0.112  Sum_probs=128.7

Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEc---CC-CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGG---LD-NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      +...+.+..-...+..-+|+|++..++..+   .. ..+.++++++++..                ........-..-+|
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~----------------~i~~~~g~~~~P~f  245 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP----------------VILNFNGNNGAPAF  245 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccc----------------eeeccCCccCCccC
Confidence            444444554555677778999888765442   22 46889999988632                22223344456789


Q ss_pred             cCCCCEEEEE-eCCCc--EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        311 LPDGRTLIVG-GEASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       311 ~~~~~~l~~~-~~dg~--i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      +|||+.|+.. ..||.  |+++|+.....   ..+....+.-..-.|+|||+.++++ .+..|.-.||-........  .
T Consensus       246 spDG~~l~f~~~rdg~~~iy~~dl~~~~~---~~Lt~~~gi~~~Ps~spdG~~ivf~-Sdr~G~p~I~~~~~~g~~~--~  319 (425)
T COG0823         246 SPDGSKLAFSSSRDGSPDIYLMDLDGKNL---PRLTNGFGINTSPSWSPDGSKIVFT-SDRGGRPQIYLYDLEGSQV--T  319 (425)
T ss_pred             CCCCCEEEEEECCCCCccEEEEcCCCCcc---eecccCCccccCccCCCCCCEEEEE-eCCCCCcceEEECCCCCce--e
Confidence            9999887765 45554  66778777652   2244444444588899999985444 5555655555554332222  1


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCC-Cc--EEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC-cE
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NI  463 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg-~i  463 (504)
                      .+......  -..-.|+|||++|+..+.. |.  |.+.|+.++............   ..-.|.++++.+...+..+ .=
T Consensus       320 riT~~~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~---e~ps~~~ng~~i~~~s~~~~~~  394 (425)
T COG0823         320 RLTFSGGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLN---ESPSWAPNGRMIMFSSGQGGGS  394 (425)
T ss_pred             EeeccCCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccC---CCCCcCCCCceEEEeccCCCCc
Confidence            11111111  1177899999999887643 44  677777665532333222222   2237888988887654433 12


Q ss_pred             EEEE-cCCcceEEEEeecCCceEEEEEcc
Q psy17188        464 AVWD-LHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       464 ~iwd-~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      .++. ..+++....+..-.+.+...+|+|
T Consensus       395 ~l~~~s~~g~~~~~~~~~~~~~~~p~w~~  423 (425)
T COG0823         395 VLSLVSLDGRVSRPLPLADGDVRVPAWSP  423 (425)
T ss_pred             eEEEeeccceeEEEEeccCcceecccccC
Confidence            2222 223443334433334444444543

>KOG1275|consensus

Probab=98.48  E-value=4.6e-06  Score=80.69  Aligned_cols=182  Identities=13%  Similarity=0.191  Sum_probs=129.6

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  204 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  204 (504)
                      ..++.|+ ...+..+|+.+....+...     -....|.-++.  +++++.+|...|+|.+-|..+.+  .+..+..|.+
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~-----v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~--~iht~~aHs~  218 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETRTTN-----VSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFE--TIHTFDAHSG  218 (1118)
T ss_pred             cceeecchhhheeeeecccceeeeeee-----ccCCceEEEEe--cCcEEEeecccceEEeecCCcCc--eeeeeecccc
Confidence            3444454 6777888887753322211     11223554443  68999999999999999998655  5788999999


Q ss_pred             ceEEEEECCCCCEEEEEeC---------CCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEEC
Q psy17188        205 ACYALAISPDSKVCFSCCS---------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~  274 (504)
                      .|.++..  .|+.|++++.         |.-|+|||++..+.+.-+.-+.++ .-+.|+|. ...++.++..|...+-|.
T Consensus       219 siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~  295 (1118)
T KOG1275|consen  219 SISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDT  295 (1118)
T ss_pred             ceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccc
Confidence            9877655  6778998875         556899999998877777655554 56778884 457888888899988884


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  330 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d  330 (504)
                      .+-.           ..+............+..+.++++++.++.+..+|.|.+|.
T Consensus       296 ~~ls-----------NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  296 ATLS-----------NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cccC-----------CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            3211           01111233334455589999999999999999999999997

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.45  E-value=3.3e-05  Score=72.50  Aligned_cols=229  Identities=15%  Similarity=0.140  Sum_probs=113.7

Q ss_pred             CCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEE-eCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW-DLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw-~~~~  190 (504)
                      ..-....+.++|+|++++.++||.-.|+.....      ..    ...+.-....|.++++ +|+-...++|.|+ +++.
T Consensus        31 ~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~------r~----k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~   99 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAW------RN----KAFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKN   99 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEETTEEEEEETTTT------EE----EEEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE
T ss_pred             CCcCCeeEEECCCCCEEEEEcCCEEEEEEccCC------cc----cccCceeEEEEecCcc-EEEEECCCeEEEEEcCcc
Confidence            334578899999999999999999999984321      11    1134455788998555 6666568889996 4432


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                       +......+..   .+..+-.   |.+|...+.+ .|.+||+.+++.++.+...  +|..+.|++++++++..+.+ .+.
T Consensus       100 -~~~k~i~~~~---~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~  168 (443)
T PF04053_consen  100 -EVVKSIKLPF---SVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIY  168 (443)
T ss_dssp             --TT-----SS----EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEE
T ss_pred             -ccceEEcCCc---ccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEE
Confidence             2111222222   2333332   7777776554 8999999999999999833  38999999999999888755 677


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceeccc-CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      +++.+...+..  ....+-.   ..+..... ...|.+..|..+  .++..+.. .++.  +-.++......+.   .++
T Consensus       169 il~~~~~~~~~--~~~~g~e---~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld---~~~  235 (443)
T PF04053_consen  169 ILKYNLEAVAA--IPEEGVE---DAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETGIIAHLD---KPL  235 (443)
T ss_dssp             EEEE-HHHHHH--BTTTB-G---GGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEEEEEE-S---S--
T ss_pred             EEEecchhccc--ccccCch---hceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcceEEEcC---Cce
Confidence            77655431000  0000000   01112222 567888888866  44444444 5655  3333222222222   244


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      .-+...+..+  .+.....++.+..+.+
T Consensus       236 yllgy~~~~~--~ly~~Dr~~~v~~~~l  261 (443)
T PF04053_consen  236 YLLGYLPKEN--RLYLIDRDGNVISYEL  261 (443)
T ss_dssp             EEEEEETTTT--EEEEE-TT--EEEEE-
T ss_pred             EEEEEEccCC--EEEEEECCCCEEEEEE
Confidence            4455555333  3444445555555544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1008|consensus

Probab=98.45  E-value=1.7e-07  Score=86.76  Aligned_cols=204  Identities=16%  Similarity=0.231  Sum_probs=129.0

Q ss_pred             CCcEEEEEEcC--CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEec----CCCcEE
Q psy17188        113 GEVVCAVTISN--PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGG----EASNLS  184 (504)
Q Consensus       113 ~~~V~~v~~s~--~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----~dg~i~  184 (504)
                      ...+.|++..-  +.-+++.|. +|.|.+-.+.......   .....++....++++|++ |.+.||.|-    .|..+.
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs---~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~  132 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSS---AEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLK  132 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCccccc---ceecccccccccccccccccHHHHHhhhhhhcccCCcc
Confidence            34566676554  334677777 8999988876543221   111226778899999999 777888873    466799


Q ss_pred             EEeCCCC--Cccceeeeec-CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEE
Q psy17188        185 IWDLASP--TPRIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKL  260 (504)
Q Consensus       185 iw~~~~~--~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l  260 (504)
                      |||+.+.  .+.....+.+ .......++|..+.+++.+|.....+.++|++.... ....-.+..+..+...| .++++
T Consensus       133 Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~-~~~svnTk~vqG~tVdp~~~nY~  211 (783)
T KOG1008|consen  133 IWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD-SVSSVNTKYVQGITVDPFSPNYF  211 (783)
T ss_pred             ceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhh-hhhhhhhhhcccceecCCCCCce
Confidence            9999875  2222222222 334456889988889999999999999999883321 11111344667788888 67777


Q ss_pred             EEEcCCCeEEEEEC-CCCceEEEeecCCCCCCCcccc--eecccCCceEEEEEcCCCC-EEEE-EeCCCcEEEEeCCC
Q psy17188        261 WTGGLDNTVRSWDL-REGCVKVWDISQPGSKTPVSQL--DCLQRDNYIRSVKLLPDGR-TLIV-GGEASNLSIWDLAS  333 (504)
Q Consensus       261 ~s~~~dg~i~~wd~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~-~~~dg~i~v~d~~~  333 (504)
                      ++-. ||.|-+||. +.-+-            ++..+  ........+..++|+|..+ .+++ .-..++|++||+..
T Consensus       212 cs~~-dg~iAiwD~~rnien------------pl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  212 CSNS-DGDIAIWDTYRNIEN------------PLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             eccc-cCceeeccchhhhcc------------HHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            7665 999999994 32211            00000  0111123488999999432 3333 34557899998753

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.43  E-value=6.6e-05  Score=70.49  Aligned_cols=166  Identities=14%  Similarity=0.162  Sum_probs=85.8

Q ss_pred             eEEEEeCCCC-----CCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEE
Q psy17188        135 CVKVWDISQP-----GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  209 (504)
Q Consensus       135 ~i~vw~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~  209 (504)
                      .|+..|++..     +...++..............+.++|+|++++++ .||...|+.....+    ....   +.....
T Consensus         3 ~i~~~~~~~~~~~~dg~~~~l~~k~lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r----~k~~---G~g~~~   74 (443)
T PF04053_consen    3 EIRTANLKNISEIKDGERLPLSVKELGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWR----NKAF---GSGLSF   74 (443)
T ss_dssp             EEEEEE--S-----TTS-B----EEEEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTE----EEEE---EE-SEE
T ss_pred             ceEEEECcCCCccCCCceeeEEeccCCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCc----cccc---CceeEE
Confidence            4666666654     223333333333455668899999999999995 47888888833211    1112   224567


Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCC
Q psy17188        210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGS  289 (504)
Q Consensus       210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~  289 (504)
                      +|.+.+ .+|+-..+++|.|+.--+.+....++ ....+..+-.   |.+|...+.+ .|.+||+.++++          
T Consensus        75 vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~-~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~----------  138 (443)
T PF04053_consen   75 VWSSRN-RYAVLESSSTIKIYKNFKNEVVKSIK-LPFSVEKIFG---GNLLGVKSSD-FICFYDWETGKL----------  138 (443)
T ss_dssp             EE-TSS-EEEEE-TTS-EEEEETTEE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--E----------
T ss_pred             EEecCc-cEEEEECCCeEEEEEcCccccceEEc-CCcccceEEc---CcEEEEECCC-CEEEEEhhHcce----------
Confidence            898855 46666668889997432222222333 1223444433   7777766644 899999999873          


Q ss_pred             CCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        290 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       290 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                            +...... .|..+.|++++++++..+.+ .+.+++.+
T Consensus       139 ------i~~i~v~-~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  139 ------IRRIDVS-AVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             ------EEEESS--E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             ------eeEEecC-CCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence                  2222222 38999999999999998765 67777654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.41  E-value=0.0011  Score=62.45  Aligned_cols=195  Identities=13%  Similarity=0.080  Sum_probs=99.3

Q ss_pred             eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee-----eeecCcCceEEE
Q psy17188        135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-----ELTSSAPACYAL  209 (504)
Q Consensus       135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~~~~~~v~~~  209 (504)
                      .|+||+...    ..+..+....  +.|.++.|+.+.+ |++-..||.+++||+.... ....     ...-....+...
T Consensus        62 ~I~iys~sG----~ll~~i~w~~--~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~  133 (410)
T PF04841_consen   62 SIQIYSSSG----KLLSSIPWDS--GRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAI  133 (410)
T ss_pred             EEEEECCCC----CEeEEEEECC--CCEEEEEECCCCe-EEEEEcCCEEEEEeCCCce-eechhhhccccCccccccccc
Confidence            599998754    2334433322  7899999998655 5555689999999986432 1110     011111222233


Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCe-EEEeecCCCCCeEE----------EEEccCCCEEEEEcCCCeEEEEECCCCc
Q psy17188        210 AISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASC----------IDISADGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~----------~~~~~~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      .+..+|  ++.-..++.+.+.+-.... ..+.+..-......          ..++.+....+....++.+.+.+-...+
T Consensus       134 ~~~~~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~  211 (410)
T PF04841_consen  134 WFYKNG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK  211 (410)
T ss_pred             ccCCCC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc
Confidence            344355  2333344555444322221 11111110010110          1222233333333333444433321110


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                                      .   ....+++..+++||++++++.-..+|.+.+....-.+........ .......+.|+.+.
T Consensus       212 ----------------~---i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~-~~~~p~~~~WCG~d  271 (410)
T PF04841_consen  212 ----------------Q---IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD-SKSPPKQMAWCGND  271 (410)
T ss_pred             ----------------c---ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC-cCCCCcEEEEECCC
Confidence                            1   223467999999999999999999999988876544333222222 23356677777764


Q ss_pred             C
Q psy17188        359 K  359 (504)
Q Consensus       359 ~  359 (504)
                      .
T Consensus       272 a  272 (410)
T PF04841_consen  272 A  272 (410)
T ss_pred             c
Confidence            3

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.40  E-value=4.6e-05  Score=67.10  Aligned_cols=251  Identities=19%  Similarity=0.250  Sum_probs=141.1

Q ss_pred             EEEEcCCCcEEEEec-----------CCeEEEEeCCCCCCCCceeeeeecC-----CCCceEEEEEccCCCEEEEec--C
Q psy17188        118 AVTISNPTKYVYTGG-----------KGCVKVWDISQPGSKTPVSQLDCLQ-----RDNYIRSVKLLPDGRTLIVGG--E  179 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~-----------d~~i~vw~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~--~  179 (504)
                      .+.++|+++.+.+.+           ...|.+||.++-.   +...+....     .-.....++++.|++++++..  -
T Consensus        40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~---~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TP  116 (342)
T PF06433_consen   40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLS---PTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTP  116 (342)
T ss_dssp             EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTE---EEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESS
T ss_pred             ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCc---ccceEecCCcchheecccccceEEccCCcEEEEEccCC
Confidence            366789999887642           2369999998742   222222111     112334568889999888763  3


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEe----ecCCCCCe-EEEEE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQ----FQGHTDGA-SCIDI  253 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~----~~~h~~~v-~~~~~  253 (504)
                      ...|.|-|+...+..  .++...  .+..+--+.+ +-+.+-|.||.+.-..+. .|+...+    |..-..++ ..-++
T Consensus       117 a~SVtVVDl~~~kvv--~ei~~P--GC~~iyP~~~-~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~  191 (342)
T PF06433_consen  117 ATSVTVVDLAAKKVV--GEIDTP--GCWLIYPSGN-RGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAY  191 (342)
T ss_dssp             SEEEEEEETTTTEEE--EEEEGT--SEEEEEEEET-TEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EE
T ss_pred             CCeEEEEECCCCcee--eeecCC--CEEEEEecCC-CceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccce
Confidence            456899999866542  222221  1332222222 357788899999999888 4544322    11122222 23344


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--------CC-
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--------AS-  324 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg-  324 (504)
                      ...+..++..+.+|.|+-.|+.....+....-......   .....-..+.-.-+++++..+.|++...        ++ 
T Consensus       192 ~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~---e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpg  268 (342)
T PF06433_consen  192 SRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDA---EKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPG  268 (342)
T ss_dssp             ETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HH---HHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-E
T ss_pred             ECCCCeEEEEecCCEEEEEeccCCcccccCcccccCcc---ccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCc
Confidence            55556677788999999999987765432111000000   0000001222345778876666665422        22 


Q ss_pred             -cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        325 -NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       325 -~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                       .|-++|+.+.+......+..   .+.+++++.+.+-.+++....++.+.+||..+++.
T Consensus       269 teVWv~D~~t~krv~Ri~l~~---~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~  324 (342)
T PF06433_consen  269 TEVWVYDLKTHKRVARIPLEH---PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKL  324 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEEE---EESEEEEESSSS-EEEEEETTTTEEEEEETTT--E
T ss_pred             eEEEEEECCCCeEEEEEeCCC---ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcE
Confidence             36667777775555544443   67799999988876666667789999999987643

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.39  E-value=0.00021  Score=66.20  Aligned_cols=259  Identities=14%  Similarity=0.193  Sum_probs=132.4

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-------------------------------------------EEEee
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-------------------------------------------LVRQF  241 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-------------------------------------------~~~~~  241 (504)
                      .|+.+.|.++...|+++...|.|.||.....+                                           ....+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            47889999998899999999999998653221                                           11112


Q ss_pred             cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-----CC--
Q psy17188        242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-----DG--  314 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~--  314 (504)
                      ....++|++++.+.-| +++.|..+|.+.+.|++...+..-..-..       ..........++++.|..     |+  
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~-------~~~~~~~~~~vt~ieF~vm~~~~D~yS  154 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRE-------SFLSKSSSSYVTSIEFSVMTLGGDGYS  154 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG---------T-SS----EEEEEEEEEE-TTSSSE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccc-------cccccccccCeeEEEEEEEecCCCccc
Confidence            3346889999998555 99999999999999998776543211111       011122344567777752     33  


Q ss_pred             -CEEEEEeCCCcEEEEeCCC-CCccceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEEEEecCCCCCCCcc-ccc
Q psy17188        315 -RTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVKVWDISQPGSKTPV-SQL  389 (504)
Q Consensus       315 -~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~-~~~  389 (504)
                       -.+++|+..|.+.+|.+.- ........         .+...         ....+.  .|..++.+++...... ..+
T Consensus       155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~---------~~~~~---------~~~~~~i~~I~~i~~~~G~~a~At~~~~  216 (395)
T PF08596_consen  155 SICLLVGTNSGNVLTFKILPSSNGRFSVQ---------FAGAT---------TNHDSPILSIIPINADTGESALATISAM  216 (395)
T ss_dssp             EEEEEEEETTSEEEEEEEEE-GGG-EEEE---------EEEEE-----------SS----EEEEEETTT--B-B-BHHHH
T ss_pred             ceEEEEEeCCCCEEEEEEecCCCCceEEE---------Eeecc---------ccCCCceEEEEEEECCCCCcccCchhHh
Confidence             4688899999999997642 11111111         11100         011111  2333444333221111 111


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEEC-----CCCCEEEEeeCCCcEE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS-----PDSKVCFSCCSDGNIA  464 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s-----~~~~~l~s~~~dg~i~  464 (504)
                      ........+         .-+++...+..++++...+.+...+..  .....+..+.+-     ..+..|++-..+|.|+
T Consensus       217 ~~l~~g~~i---------~g~vVvvSe~~irv~~~~~~k~~~K~~--~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~  285 (395)
T PF08596_consen  217 QGLSKGISI---------PGYVVVVSESDIRVFKPPKSKGAHKSF--DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIR  285 (395)
T ss_dssp             HGGGGT-------------EEEEEE-SSEEEEE-TT---EEEEE---SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEE
T ss_pred             hccccCCCc---------CcEEEEEcccceEEEeCCCCcccceee--ccccccceEEEEeecccCCceEEEEEECCCcEE
Confidence            111111111         123333456779999988765443332  222233344452     3567788888999999


Q ss_pred             EEEcCCcceEEEEeecC----CceEEEEEccCCCEEEEec
Q psy17188        465 VWDLHNQTLVRQFQGHT----DGASCIDISADGTKLWTGG  500 (504)
Q Consensus       465 iwd~~~~~~~~~~~~h~----~~v~~~~~s~d~~~l~s~s  500 (504)
                      +|.+..-+.+..++-+.    ..+....++++|..++-.|
T Consensus       286 i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~g  325 (395)
T PF08596_consen  286 IYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTG  325 (395)
T ss_dssp             EEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-S
T ss_pred             EEECCCchHhhcccCCCccccccccccEECCCCCEEEEeC
Confidence            99999998888776532    2355667788888776554

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG3617|consensus

Probab=98.38  E-value=6.3e-05  Score=72.56  Aligned_cols=111  Identities=14%  Similarity=0.162  Sum_probs=84.4

Q ss_pred             CcEEEEEEcCCCcEEEEec-----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        114 EVVCAVTISNPTKYVYTGG-----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +.-+-..|+|...+++.++     .|.|.||- ++|+....+.      -.-.+++++|+|..-.|+.|-.-|.+.+|..
T Consensus        16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt------~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~   88 (1416)
T KOG3617|consen   16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT------YPVHATSLCWHPEEFVLAQGWEMGVSDVQKT   88 (1416)
T ss_pred             ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc------cceehhhhccChHHHHHhhccccceeEEEec
Confidence            3334567888888887664     58898885 4444222211      1233667999999989999988999999998


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+.+  .......|..+|..+.||++|..|+++..-|.|.+|...
T Consensus        89 ~~~e--~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   89 NTTE--THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             CCce--eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            7544  244456789999999999999999999999999999876

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.32  E-value=0.00014  Score=62.44  Aligned_cols=195  Identities=10%  Similarity=0.093  Sum_probs=108.6

Q ss_pred             ccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        300 QRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      +-...+..++|+|+.+ ++++....+.|..++.+ ++......+.+ ......+++..++.  ++++...++.+.++++.
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-~~D~EgI~y~g~~~--~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-FGDYEGITYLGNGR--YVLSEERDQRLYIFTID   94 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS--SSEEEEEE-STTE--EEEEETTTTEEEEEEE-
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-CCCceeEEEECCCE--EEEEEcCCCcEEEEEEe
Confidence            3345599999999755 55666777888888864 43333333333 45788899987776  66666678999999985


Q ss_pred             CCCCCCcccc---cc--c-ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC---CCcceeec------ccCCCCcee
Q psy17188        379 QPGSKTPVSQ---LD--C-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---PTPRIKAE------LTSSAPACY  443 (504)
Q Consensus       379 ~~~~~~~~~~---~~--~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~~~~~~~v~  443 (504)
                      ..........   +.  . ..++..+..++|+|.++.|+++-+..-..+|.++.   ........      .......+.
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence            4432222211   11  1 12455688999999988888887776667776653   11111110      122334567


Q ss_pred             EEEECCC-CCEEEEeeCCCcEEEEEcCCcceEEEEeecC---------CceEEEEEccCCCEEEEe
Q psy17188        444 ALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT---------DGASCIDISADGTKLWTG  499 (504)
Q Consensus       444 ~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~---------~~v~~~~~s~d~~~l~s~  499 (504)
                      +++++|. +++++....+..|.++| .+|+.+..+.--.         ...-.|+|.++|+..+++
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs  239 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS  239 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence            8899985 45666777788899999 6777766555222         246789999999665543

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.31  E-value=6e-05  Score=70.56  Aligned_cols=185  Identities=17%  Similarity=0.166  Sum_probs=113.6

Q ss_pred             CceEEEEEcCCCCEEEEE---eCC-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeE--EEEe
Q psy17188        303 NYIRSVKLLPDGRTLIVG---GEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV--KVWD  376 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~---~~d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i--~i~d  376 (504)
                      ..+..-+|+|++..++..   ... ..+.++++++++.........   .-...+|+||++. ++.+...++..  .++|
T Consensus       193 ~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g---~~~~P~fspDG~~-l~f~~~rdg~~~iy~~d  268 (425)
T COG0823         193 SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG---NNGAPAFSPDGSK-LAFSSSRDGSPDIYLMD  268 (425)
T ss_pred             cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC---ccCCccCCCCCCE-EEEEECCCCCccEEEEc
Confidence            445667889988776544   222 358999999887665555443   4556789999987 45555556654  4555


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-Cc--EEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      +.......    +  ....+.-..-.|+|||++|+..+.. |.  |.+++.+....... ........  .-.|+|||++
T Consensus       269 l~~~~~~~----L--t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~ri-T~~~~~~~--~p~~SpdG~~  339 (425)
T COG0823         269 LDGKNLPR----L--TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRL-TFSGGGNS--NPVWSPDGDK  339 (425)
T ss_pred             CCCCccee----c--ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEe-eccCCCCc--CccCCCCCCE
Confidence            55443111    1  1112222367899999998877553 33  77777776654322 22222221  4589999999


Q ss_pred             EEEeeCC-Cc--EEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        454 CFSCCSD-GN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       454 l~s~~~d-g~--i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ++..+.. |.  |.+.|+.++..++.+. +......-.|.++++.++..+.
T Consensus       340 i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         340 IVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             EEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEecc
Confidence            9977643 44  6677776666443333 3444556677888877766554

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.29  E-value=0.0042  Score=60.60  Aligned_cols=158  Identities=13%  Similarity=0.159  Sum_probs=89.7

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC---CCCEEEEEeC------CCcEEEEECCCCeEEEee
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP---DSKVCFSCCS------DGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~------dg~i~iwd~~~~~~~~~~  241 (504)
                      +..++.++.|+.|.-.|.++++.........+... ..+.-+|   ++ .++++..      +|.|..+|.++|+.+..+
T Consensus       120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~-~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~  197 (527)
T TIGR03075       120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAG-YTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRR  197 (527)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEeeccccccccc-ccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEec
Confidence            34677788899999999998886544443222110 0111122   44 4555432      688999999999988775


Q ss_pred             cCCCC-------------------------------Ce-EEEEEccCCCEEEEEcCC-----C-----------eEEEEE
Q psy17188        242 QGHTD-------------------------------GA-SCIDISADGTKLWTGGLD-----N-----------TVRSWD  273 (504)
Q Consensus       242 ~~h~~-------------------------------~v-~~~~~~~~~~~l~s~~~d-----g-----------~i~~wd  273 (504)
                      ..-..                               .+ ..+.+.++..+++.+..+     +           .|.-.|
T Consensus       198 ~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld  277 (527)
T TIGR03075       198 YTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARD  277 (527)
T ss_pred             cCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEc
Confidence            43111                               11 123556655566655421     2           677778


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCc
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      +++|+++ |..+......     --........-+.+..+|+   .++.+..+|.++++|.++++.
T Consensus       278 ~~TG~~~-W~~Q~~~~D~-----wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~  337 (527)
T TIGR03075       278 PDTGKIK-WHYQTTPHDE-----WDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL  337 (527)
T ss_pred             cccCCEE-EeeeCCCCCC-----ccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence            8888864 4333211110     0001111122233334665   677899999999999988764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.23  E-value=0.00074  Score=60.23  Aligned_cols=222  Identities=15%  Similarity=0.199  Sum_probs=122.8

Q ss_pred             EEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17188        252 DISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  330 (504)
Q Consensus       252 ~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d  330 (504)
                      .|.++.. ++.+--..+.|.-|+..+++.+.|...                 ..+.++..-..+..|+++..  -+.+++
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p-----------------~~~~~~~~~d~~g~Lv~~~~--g~~~~~   91 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSP-----------------GGFSSGALIDAGGRLIACEH--GVRLLD   91 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECC-----------------CCcccceeecCCCeEEEEcc--ccEEEe
Confidence            4666655 444555667888888887765544322                 22333333334444554433  245566


Q ss_pred             CCCCCc-cceeeec--cCCCceeeEEECCCCCCceeeeccC---------CCeEEEEecCC-CCCCCcccccccccCCCc
Q psy17188        331 LASPTP-RIKAELT--SSAPACYALAISPDSKSPFFSSHHY---------KSCVKVWDISQ-PGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       331 ~~~~~~-~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~-~~~~~~~~~~~~~~~~~~  397 (504)
                      .++... .......  ............|+|.  +.++...         ...-.+|-+.. +.......     .+-..
T Consensus        92 ~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~--~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~-----~~~~~  164 (307)
T COG3386          92 PDTGGKITLLAEPEDGLPLNRPNDGVVDPDGR--IWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLD-----DDLTI  164 (307)
T ss_pred             ccCCceeEEeccccCCCCcCCCCceeEcCCCC--EEEeCCCccccCccccCCcceEEEEcCCCCEEEeec-----CcEEe
Confidence            544332 1111111  1223556778888877  3333222         01113444442 11111111     11223


Q ss_pred             eEEEEEcCCCCEEEEeeCC-CcEEEeeCCC--C---CcceeecccCCCCceeEEEECCCCCEEEEeeCCC-cEEEEEcCC
Q psy17188        398 IRSVKLLPDGRTLIVGGEA-SNLSIWDLAS--P---TPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHN  470 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~d-g~i~iwd~~~--~---~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg-~i~iwd~~~  470 (504)
                      -+.++||||++.|+.+... +.|+-|++..  +   ............+..-.++...+|.+.+++..+| .|.+|+.+ 
T Consensus       165 ~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-  243 (307)
T COG3386         165 PNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-  243 (307)
T ss_pred             cCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-
Confidence            4589999999888877554 6788887752  1   1111122222334445568888898886555554 89999988 


Q ss_pred             cceEEEEeecCCceEEEEEc-cCCCEEEEec
Q psy17188        471 QTLVRQFQGHTDGASCIDIS-ADGTKLWTGG  500 (504)
Q Consensus       471 ~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s  500 (504)
                      |+++..+.-....+++++|- ++.+.|+..+
T Consensus       244 G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         244 GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            99999988776788888885 4555555444

>KOG1897|consensus

Probab=98.20  E-value=0.0088  Score=59.61  Aligned_cols=359  Identities=12%  Similarity=0.061  Sum_probs=184.9

Q ss_pred             CCCcEEEEEEcCC--C----cEEEEec-CCeEEEE-eCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        112 HGEVVCAVTISNP--T----KYVYTGG-KGCVKVW-DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       112 h~~~V~~v~~s~~--~----~~l~~~~-d~~i~vw-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      -+..|.|+.++|-  +    ++++.|. +..+.+- -.... .......+....-...|.-..|-.|..+|.++..||.+
T Consensus       529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~-~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l  607 (1096)
T KOG1897|consen  529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDL-ILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGAL  607 (1096)
T ss_pred             ecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCc-ceeeeeccCCCccchheeeEEeeccceEEEEEcCCceE
Confidence            3578999999973  2    3778877 4444333 33221 11111111111223456666676678999999999998


Q ss_pred             EEEeCCCCCccc--eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEE-EEccC--CC
Q psy17188        184 SIWDLASPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI-DISAD--GT  258 (504)
Q Consensus       184 ~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~-~~~~~--~~  258 (504)
                      .-|.++..+...  .....-...++.--.|+..++.-+.+..|.-..+|.- +++++.+-- .-..+..+ .|+.+  ..
T Consensus       608 ~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~-n~kLv~spl-s~kev~~~c~f~s~a~~d  685 (1096)
T KOG1897|consen  608 LYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS-NGKLVYSPL-SLKEVNHMCPFNSDAYPD  685 (1096)
T ss_pred             EEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec-CCcEEEecc-chHHhhhhcccccccCCc
Confidence            877665443221  2212223344555566665554444556666677763 344333211 01111111 12221  22


Q ss_pred             EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC--------------C
Q psy17188        259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--------------S  324 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g  324 (504)
                      .|+++. .+.+++..++.-+-.              ...........+.+++.+....+.+.+..              .
T Consensus       686 ~l~~~~-~~~l~i~tid~iqkl--------------~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s  750 (1096)
T KOG1897|consen  686 SLASAN-GGALTIGTIDEIQKL--------------HIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVS  750 (1096)
T ss_pred             eEEEec-CCceEEEEecchhhc--------------ceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEE
Confidence            345444 345666555432100              11112233445566666544434333211              1


Q ss_pred             cEEEEeCCCCCccceeeeccCC--CceeeEEECCCCCCceeeecc----------CCCeEEEEecCCCCCCCcccccccc
Q psy17188        325 NLSIWDLASPTPRIKAELTSSA--PACYALAISPDSKSPFFSSHH----------YKSCVKVWDISQPGSKTPVSQLDCL  392 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~----------~~~~i~i~d~~~~~~~~~~~~~~~~  392 (504)
                      .++++|-++.+.....++....  ..+.+..|..|... +++.|.          ..|.|.+|.+...+.   +......
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t-~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~---L~~v~e~  826 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNT-YYVVGTGLVYPDENEPVNGRIIVFEFEELNS---LELVAET  826 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCce-EEEEEEEeeccCCCCcccceEEEEEEecCCc---eeeeeee
Confidence            3666666655433333322221  23444557666443 444442          247788888776222   2222222


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc--CC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HN  470 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~--~~  470 (504)
                      .-.+.+.++..- +|++||.  -+..|++|++.+.+...  ....+...+..+...-.+..+++|+--+++.+-..  ..
T Consensus       827 ~v~Gav~aL~~f-ngkllA~--In~~vrLye~t~~~eLr--~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e  901 (1096)
T KOG1897|consen  827 VVKGAVYALVEF-NGKLLAG--INQSVRLYEWTTERELR--IECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE  901 (1096)
T ss_pred             eeccceeehhhh-CCeEEEe--cCcEEEEEEccccceeh--hhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence            233444444332 5666665  45679999998763332  23345566788888889999999988887776544  34


Q ss_pred             cceEEEEe-ecCCceEEEEEccCCCEEE
Q psy17188        471 QTLVRQFQ-GHTDGASCIDISADGTKLW  497 (504)
Q Consensus       471 ~~~~~~~~-~h~~~v~~~~~s~d~~~l~  497 (504)
                      |.....-+ -+....+++.+-.+..+|.
T Consensus       902 g~f~evArD~~p~Wmtaveil~~d~ylg  929 (1096)
T KOG1897|consen  902 GNFEEVARDYNPNWMTAVEILDDDTYLG  929 (1096)
T ss_pred             CceEEeehhhCccceeeEEEecCceEEe
Confidence            33433222 3566777777776655543

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.20  E-value=0.0025  Score=57.05  Aligned_cols=248  Identities=15%  Similarity=0.090  Sum_probs=128.9

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV  293 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~  293 (504)
                      .++.|+.|+++| +.++++........+. +...|..+...++-+.|++-+ |+.++++++..-............+.. 
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~-   81 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR-   81 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc-
Confidence            567899999888 9999983332222222 333499999999877777665 599999998865421100000000000 


Q ss_pred             ccceecccCCceEEEE--EcC-CCCEEEEEeCCCcEEEEeCCCCC--c-cceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        294 SQLDCLQRDNYIRSVK--LLP-DGRTLIVGGEASNLSIWDLASPT--P-RIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       294 ~~~~~~~~~~~v~~~~--~~~-~~~~l~~~~~dg~i~v~d~~~~~--~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                      ...........+..++  -.. ....|+++ ....|.+|......  . ....++. -...+..++|..+    .++.+.
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~~----~i~v~~  155 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLGN----KICVGT  155 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeCC----EEEEEe
Confidence            0000111222334444  122 33445554 44588888876642  2 2333333 2357888888844    444444


Q ss_pred             CCCeEEEEecCCCCCCCcccccc-------cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCC
Q psy17188        368 YKSCVKVWDISQPGSKTPVSQLD-------CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  440 (504)
Q Consensus       368 ~~~~i~i~d~~~~~~~~~~~~~~-------~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  440 (504)
                       .....+.|+.+...........       ......++..+... ++.+|++-  +..-.+.|.. ++......+.-.. 
T Consensus       156 -~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~~-G~~~r~~~i~W~~-  229 (275)
T PF00780_consen  156 -SKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNKN-GEPSRKSTIQWSS-  229 (275)
T ss_pred             -CCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcCC-CCcCcccEEEcCC-
Confidence             4457778887543322111100       00112233333333 45666653  3333344443 3322211111111 


Q ss_pred             ceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec
Q psy17188        441 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  480 (504)
Q Consensus       441 ~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h  480 (504)
                      ....+++  ...||+....++ |.||++.++++++.+...
T Consensus       230 ~p~~~~~--~~pyli~~~~~~-iEV~~~~~~~lvQ~i~~~  266 (275)
T PF00780_consen  230 APQSVAY--SSPYLIAFSSNS-IEVRSLETGELVQTIPLP  266 (275)
T ss_pred             chhEEEE--ECCEEEEECCCE-EEEEECcCCcEEEEEECC
Confidence            2344455  345787776654 999999999999988743

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.20  E-value=0.006  Score=57.55  Aligned_cols=202  Identities=12%  Similarity=0.094  Sum_probs=102.1

Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI  305 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  305 (504)
                      .|.||+. .|+.+.++.-..+.+.++.|+.+. .|+....||.++++|+....  .+.+...-...       .-.+..+
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~--~fsl~~~i~~~-------~v~e~~i  130 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEF--QFSLGEEIEEE-------KVLECRI  130 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCCce--eechhhhcccc-------Ccccccc
Confidence            4788874 455566655444899999998855 56677789999999987433  22221111000       0011112


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCC-----C-ceee-EEECCCCCCceeeeccCCCeEEEEe
Q psy17188        306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKAELTSSA-----P-ACYA-LAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       306 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~-----~-~i~~-~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      ....+..+|  +++-..++.+.+..-......  .........     . .... ..++.+..  ..+....++.+.+.+
T Consensus       131 ~~~~~~~~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~--~~i~~~~g~~i~~i~  206 (410)
T PF04841_consen  131 FAIWFYKNG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV--VEILLANGETIYIID  206 (410)
T ss_pred             cccccCCCC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcc--eEEEEecCCEEEEEE
Confidence            222333344  333334444444432221100  000111100     0 0000 12233322  333333445555443


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                      -.....         ....+++..+++||+|++||.-..+|.+.+.+..-.+........ .......+.|.-+..
T Consensus       207 ~~~~~~---------i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~-~~~~p~~~~WCG~da  272 (410)
T PF04841_consen  207 ENSFKQ---------IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD-SKSPPKQMAWCGNDA  272 (410)
T ss_pred             cccccc---------ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC-cCCCCcEEEEECCCc
Confidence            221100         123467999999999999999999999999876544444444433 223445667766543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.16  E-value=0.0035  Score=59.90  Aligned_cols=250  Identities=18%  Similarity=0.190  Sum_probs=127.7

Q ss_pred             eEEEEECCCCCEEEEE-eCCC----cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC-----------eE
Q psy17188        206 CYALAISPDSKVCFSC-CSDG----NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN-----------TV  269 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~-~~dg----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----------~i  269 (504)
                      +....++||+++++.+ +..|    .++++|+++++.+...-.. .....+.|.++++.|+....+.           .|
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            4467899999988755 3444    4999999999876543111 1223499999988776654332           47


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC----CcEEEEeCCCC---Cccceeee
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASP---TPRIKAEL  342 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~---~~~~~~~~  342 (504)
                      +.|++.+..-.-           ...+...........+..++++++|+.....    ..+.+.++...   ........
T Consensus       205 ~~~~~gt~~~~d-----------~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~  273 (414)
T PF02897_consen  205 YRHKLGTPQSED-----------ELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLS  273 (414)
T ss_dssp             EEEETTS-GGG------------EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEE
T ss_pred             EEEECCCChHhC-----------eeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEe
Confidence            788877664210           0011111111125678899999998865332    34777787764   22222222


Q ss_pred             ccCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCCCCCCcccccccccCCC--ceEEEEEcCCCCEEEE-eeCCC
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQPGSKTPVSQLDCLQRDN--YIRSVKLLPDGRTLIV-GGEAS  417 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~g~~l~~-~~~dg  417 (504)
                      .........+...  +...++.+..  ..+.|...++..........  ....+..  .+..+...  +.+|+. ...++
T Consensus       274 ~~~~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~--~l~~~~~~~~l~~~~~~--~~~Lvl~~~~~~  347 (414)
T PF02897_consen  274 PREDGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWT--VLIPEDEDVSLEDVSLF--KDYLVLSYRENG  347 (414)
T ss_dssp             ESSSS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEE--EEE--SSSEEEEEEEEE--TTEEEEEEEETT
T ss_pred             CCCCceEEEEEcc--CCEEEEeeCCCCCCcEEEEeccccccccccee--EEcCCCCceeEEEEEEE--CCEEEEEEEECC
Confidence            2222222333333  3332444432  23456666665543211111  1222333  34455543  444444 44444


Q ss_pred             --cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe-eC---CCcEEEEEcCCcceE
Q psy17188        418 --NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CS---DGNIAVWDLHNQTLV  474 (504)
Q Consensus       418 --~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~-~~---dg~i~iwd~~~~~~~  474 (504)
                        .|+++++..+.......+.. .+.|..+...++++.+... +.   -++++.||+.+++..
T Consensus       348 ~~~l~v~~~~~~~~~~~~~~p~-~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  348 SSRLRVYDLDDGKESREIPLPE-AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEEEEEETT-TEEEEEEESSS-SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             ccEEEEEECCCCcEEeeecCCc-ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence              48899988333333333333 3345556655666554422 21   367888999888753

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.12  E-value=0.0028  Score=53.77  Aligned_cols=250  Identities=18%  Similarity=0.240  Sum_probs=131.4

Q ss_pred             EEEEccC-CCEEEEecCCCc-EEEEeCCCCCcccee------eeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEE
Q psy17188        164 SVKLLPD-GRTLIVGGEASN-LSIWDLASPTPRIKA------ELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVW  230 (504)
Q Consensus       164 ~~~~s~~-~~~l~~~~~dg~-i~iw~~~~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw  230 (504)
                      .++|+|. .+-++.+-.-|+ ..++|....+.....      .+.+|      =.|||||.+|+..-.|     |.|-||
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGH------Gvfs~dG~~LYATEndfd~~rGViGvY  145 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGH------GVFSPDGRLLYATENDFDPNRGVIGVY  145 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecc------cccCCCCcEEEeecCCCCCCCceEEEE
Confidence            5677773 344555555454 567887765532221      12233      3699999998876543     679999


Q ss_pred             ECCCC-eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE-ECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        231 DLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW-DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       231 d~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      |.+.+ +.+..+..|.-....+.|.+||+.++.+.  |-|..- |...-++                 .       +.  
T Consensus       146 d~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~l-----------------N-------ld--  197 (366)
T COG3490         146 DAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTEL-----------------N-------LD--  197 (366)
T ss_pred             ecccccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCcccc-----------------c-------hh--
Confidence            98854 56677888888888999999999888764  334433 2211110                 0       00  


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec--cCCCceeeEEECCCCCCceeeeccCCCe-----EEEEecCCCC
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--SSAPACYALAISPDSKSPFFSSHHYKSC-----VKVWDISQPG  381 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----i~i~d~~~~~  381 (504)
                                  +..-.+.+.|..+++......+.  .+.-.+..++..+|+.  ++..+-..|.     -.+=-...++
T Consensus       198 ------------sMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgt--vwfgcQy~G~~~d~ppLvg~~~~g~  263 (366)
T COG3490         198 ------------SMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGT--VWFGCQYRGPRNDLPPLVGHFRKGE  263 (366)
T ss_pred             ------------hcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCc--EEEEEEeeCCCccCCcceeeccCCC
Confidence                        01111222222222222222332  3333556666666655  2222211111     0000000111


Q ss_pred             CCCc--ccccccccCCCceEEEEEcCCCCEEEEeeCCC-cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        382 SKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       382 ~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      ..+.  ..+.....-.++|-+++.+.+..+++..+-.| ...+||..++..+....+..-.    .++  +...-++..+
T Consensus       264 ~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~daa----Gva--~~~~gf~vss  337 (366)
T COG3490         264 PLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPDAA----GVA--AAKGGFAVSS  337 (366)
T ss_pred             cCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccccc----cce--eccCceEEec
Confidence            1110  11111112345677888887767776666554 5789999998766554443322    122  3344466666


Q ss_pred             CCCcEEEEE
Q psy17188        459 SDGNIAVWD  467 (504)
Q Consensus       459 ~dg~i~iwd  467 (504)
                      .+|.+.+++
T Consensus       338 g~G~~~~~s  346 (366)
T COG3490         338 GQGRIIFYS  346 (366)
T ss_pred             CCceEEecc
Confidence            788888774

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.11  E-value=0.00081  Score=62.46  Aligned_cols=229  Identities=15%  Similarity=0.143  Sum_probs=119.5

Q ss_pred             cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC----------------------c---------------eee-eee
Q psy17188        115 VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT----------------------P---------------VSQ-LDC  155 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~----------------------~---------------~~~-~~~  155 (504)
                      .|+++.|+++..-|+++. .|.|.||.+...+...                      .               +.. .-.
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            588999999765555555 8999998764321110                      0               000 011


Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeec------CcCceEEEEECC-----CC---CEEEEE
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS------SAPACYALAISP-----DS---KVCFSC  221 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~s~-----~~---~~l~~~  221 (504)
                      ....+.|++++.| |--++|.|..+|.+.|.|++.+.......+..      ....++++.|+-     |+   -.|++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            1236889999998 56699999999999999998655333222222      334577888852     33   378899


Q ss_pred             eCCCcEEEEECC-C--C----eEEEeecCCCCCeEEEE-EccC-C-------------------CEEEEEcCCCeEEEEE
Q psy17188        222 CSDGNIAVWDLH-N--Q----TLVRQFQGHTDGASCID-ISAD-G-------------------TKLWTGGLDNTVRSWD  273 (504)
Q Consensus       222 ~~dg~i~iwd~~-~--~----~~~~~~~~h~~~v~~~~-~~~~-~-------------------~~l~s~~~dg~i~~wd  273 (504)
                      ...|.+.+|.+. .  +    +.......+.+.|..+. ++.+ |                   +-++....+..++++.
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~  241 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK  241 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence            999999999875 1  2    12222234666666665 3211 1                   1233344467899998


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEE-----cCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc--CC
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL-----LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS--SA  346 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~  346 (504)
                      ..+.+...               ...........+.+     ...+..|++-..+|.+++|.+...+......+..  ..
T Consensus       242 ~~~~k~~~---------------K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~  306 (395)
T PF08596_consen  242 PPKSKGAH---------------KSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS  306 (395)
T ss_dssp             TT---EEE---------------EE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred             CCCCcccc---------------eeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence            87765321               11111112223333     2356678888999999999998765444443321  12


Q ss_pred             CceeeEEECCCCC
Q psy17188        347 PACYALAISPDSK  359 (504)
Q Consensus       347 ~~i~~~~~~~~~~  359 (504)
                      ..+....++++|+
T Consensus       307 ~~~~~ssis~~Gd  319 (395)
T PF08596_consen  307 RRLSSSSISRNGD  319 (395)
T ss_dssp             HHHTT-EE-TTS-
T ss_pred             ccccccEECCCCC
Confidence            2345566677776

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.10  E-value=0.0066  Score=56.88  Aligned_cols=204  Identities=20%  Similarity=0.241  Sum_probs=134.8

Q ss_pred             CceEEEEEccCCCEEEE-ecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCC
Q psy17188        160 NYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQ  235 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~  235 (504)
                      ..-..++.++.++.+.. ...++.|.+.|..+.+..... ..+.  ....++++++++.+.++..   ++++.+.|..++
T Consensus        74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~-~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~  150 (381)
T COG3391          74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSI-PVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN  150 (381)
T ss_pred             ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEe-eecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence            34557788888875544 445688999997654432221 1222  4567999999987777665   688999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      +.......-..+ ..+++.|+|+.++... .++.|.+.|.....+.. .  .        .............+.++++|
T Consensus       151 ~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~--~--------~~~~~~~~~~P~~i~v~~~g  218 (381)
T COG3391         151 KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-G--S--------VGSLVGVGTGPAGIAVDPDG  218 (381)
T ss_pred             eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-c--c--------cccccccCCCCceEEECCCC
Confidence            888886544344 8999999999665554 78899999977655321 0  0        00112233445778999999


Q ss_pred             CEEEEEeCC---CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        315 RTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       315 ~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      +++.+....   +.+...|..+............. ....+...|+++. +.+.-...+.+.+.|....
T Consensus       219 ~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~-~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         219 NRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKA-AYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             CEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCE-EEEEecCCCeEEEEeCCCC
Confidence            977776544   48888888776433222222333 5677899999996 3333344678888887654

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.08  E-value=0.0052  Score=54.98  Aligned_cols=234  Identities=18%  Similarity=0.234  Sum_probs=125.8

Q ss_pred             cCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-------
Q psy17188        169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-------  241 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------  241 (504)
                      ..++.|+.|+++| +.+++...... .....  +...|..+...++-+.|++-+ |+.+.++++..-......       
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~-~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~   79 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSK-PTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK   79 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCcc-ceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence            3578899998888 99999832221 11111  222399999999877776664 599999998765433311       


Q ss_pred             -------cCCCCCeEEEE--EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        242 -------QGHTDGASCID--ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       242 -------~~h~~~v~~~~--~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                             ......+...+  -...+...+.......|.+|.........        .   ...........+.+++|. 
T Consensus        80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f--------~---~~~ke~~lp~~~~~i~~~-  147 (275)
T PF00780_consen   80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSF--------S---KLLKEISLPDPPSSIAFL-  147 (275)
T ss_pred             cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccc--------c---ceeEEEEcCCCcEEEEEe-
Confidence                   11233444444  11233344444445588888776532100        0   123334445778899998 


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC----------CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA----------PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                       ++.++++..+ ...+.|+.++............          .++..+... ++.  ++++.  +..-.+.|......
T Consensus       148 -~~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e--~Ll~~--~~~g~fv~~~G~~~  220 (275)
T PF00780_consen  148 -GNKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNE--FLLCY--DNIGVFVNKNGEPS  220 (275)
T ss_pred             -CCEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-Cce--EEEEe--cceEEEEcCCCCcC
Confidence             5678877654 4788898866544333222211          122222332 222  44432  33333334332211


Q ss_pred             CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~  434 (504)
                      .  ...+   .-......+++.  ..+|+.... +.|.||++.+++......
T Consensus       221 r--~~~i---~W~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~  264 (275)
T PF00780_consen  221 R--KSTI---QWSSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIP  264 (275)
T ss_pred             c--ccEE---EcCCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEE
Confidence            1  1111   112234456663  347776655 559999999886654443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=98.03  E-value=0.012  Score=54.72  Aligned_cols=91  Identities=18%  Similarity=0.214  Sum_probs=60.3

Q ss_pred             EEEEccCCCEEEEecCCCcEEE---EeCCC-C--Cccceeee----ecCc-CceEEEEEC-----------CCCCEEEEE
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSI---WDLAS-P--TPRIKAEL----TSSA-PACYALAIS-----------PDSKVCFSC  221 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~i---w~~~~-~--~~~~~~~~----~~~~-~~v~~~~~s-----------~~~~~l~~~  221 (504)
                      .++.+|+++.||.+..+..+.+   |+... +  ........    .... ..|+++.+-           +|...+++|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            4678999999999977666555   54321 1  11111111    1111 467776663           345689999


Q ss_pred             eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc
Q psy17188        222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  255 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~  255 (504)
                      ..+|.|++|.. +|.++..-.-|..+|..+.+..
T Consensus        86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~  118 (415)
T PF14655_consen   86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS  118 (415)
T ss_pred             ecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence            99999999985 6777666666899999988754

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.01  E-value=0.0022  Score=58.78  Aligned_cols=223  Identities=14%  Similarity=0.192  Sum_probs=124.0

Q ss_pred             CcEEEEECCCCeEEEeecC-CCCCeEEEEE---ccC----CCEEEEEcC----------CCeEEEEECCCCceEEEeecC
Q psy17188        225 GNIAVWDLHNQTLVRQFQG-HTDGASCIDI---SAD----GTKLWTGGL----------DNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~-h~~~v~~~~~---~~~----~~~l~s~~~----------dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      ..|++.|..+.+.+..+.- ....+.+++.   ..+    ..+|+.|..          .|.|.++++.....       
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~-------   74 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPE-------   74 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS---------
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccc-------
Confidence            3578888888777666543 2233444443   322    356766642          28888988887400       


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                        ....+.........+.|.+++-- +++ |+++. ++.|.+|++...+ ........ ....+.++....+    +++.
T Consensus        75 --~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~-~~~~i~sl~~~~~----~I~v  144 (321)
T PF03178_consen   75 --NNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYD-SPFYITSLSVFKN----YILV  144 (321)
T ss_dssp             -----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE--BSSSEEEEEEETT----EEEE
T ss_pred             --cceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheec-ceEEEEEEecccc----EEEE
Confidence              00011133344557788888866 344 55543 4789999998876 33333332 2335666666544    7778


Q ss_pred             ccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-------C-cceeecccC
Q psy17188        366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-------T-PRIKAELTS  437 (504)
Q Consensus       366 ~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-------~-~~~~~~~~~  437 (504)
                      +.....+.++..+..  ...+...........++++.+-++++.++++..+|.+.++.....       . .........
T Consensus       145 gD~~~sv~~~~~~~~--~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~  222 (321)
T PF03178_consen  145 GDAMKSVSLLRYDEE--NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH  222 (321)
T ss_dssp             EESSSSEEEEEEETT--TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE
T ss_pred             EEcccCEEEEEEEcc--CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE
Confidence            877777887765541  222333333344666889999877779999999999999987631       1 111111112


Q ss_pred             CCCceeEE---EECCC--CC------EEEEeeCCCcEEEE
Q psy17188        438 SAPACYAL---AISPD--SK------VCFSCCSDGNIAVW  466 (504)
Q Consensus       438 ~~~~v~~l---~~s~~--~~------~l~s~~~dg~i~iw  466 (504)
                      ....|+++   .+.|.  +.      .++.++.+|.|...
T Consensus       223 lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  223 LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             -SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            23446666   44451  22      47788889988843

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.01  E-value=0.0042  Score=56.91  Aligned_cols=219  Identities=14%  Similarity=0.181  Sum_probs=126.1

Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEE---EECCC----CCEEEEEeC----------CCcEEEEECCCC-----e--
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYAL---AISPD----SKVCFSCCS----------DGNIAVWDLHNQ-----T--  236 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~---~~s~~----~~~l~~~~~----------dg~i~iwd~~~~-----~--  236 (504)
                      +.|++.|..+.+......+...+ .+.++   .+..+    ..++++|..          .|.|.++++.+.     +  
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E-~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~   80 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNE-HVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK   80 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTE-EEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCc-eEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence            35788887766654444555433 24433   34332    457777753          288999999884     2  


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      .+.... ..++|++++-. ++ +|+.+. .+.|.+|++...+ +.              ..........+.++...  ++
T Consensus        81 ~i~~~~-~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~--------------~~~~~~~~~~i~sl~~~--~~  140 (321)
T PF03178_consen   81 LIHSTE-VKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLL--------------KKAFYDSPFYITSLSVF--KN  140 (321)
T ss_dssp             EEEEEE-ESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEE--------------EEEEE-BSSSEEEEEEE--TT
T ss_pred             EEEEEe-ecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccch--------------hhheecceEEEEEEecc--cc
Confidence            222223 57889998876 34 444443 4789999998876 32              22222233355666554  56


Q ss_pred             EEEEEeCCCcEEEEeCCCCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC----CC-ccccc
Q psy17188        316 TLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS----KT-PVSQL  389 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~-~~~~~  389 (504)
                      ++++|.....+.++..+.... ............+.++.+-++++  .++.+..+|.+.++.......    .. .+...
T Consensus       141 ~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~--~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~  218 (321)
T PF03178_consen  141 YILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDED--TIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERI  218 (321)
T ss_dssp             EEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSS--EEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEE
T ss_pred             EEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCc--EEEEEcCCCeEEEEEECCCCcccccccccceeE
Confidence            999998888888875544221 22222233455688888887774  788999999999998864211    11 23333


Q ss_pred             ccccCCCceEEE---EEcC--CCC------EEEEeeCCCcEEEe
Q psy17188        390 DCLQRDNYIRSV---KLLP--DGR------TLIVGGEASNLSIW  422 (504)
Q Consensus       390 ~~~~~~~~i~~~---~~s~--~g~------~l~~~~~dg~i~iw  422 (504)
                      ........|+++   .+.|  .+.      .++.++.+|.|...
T Consensus       219 ~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  219 SSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             EEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             EEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            334455667777   5455  222      47778889988743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.99  E-value=0.0082  Score=51.70  Aligned_cols=206  Identities=13%  Similarity=0.104  Sum_probs=110.3

Q ss_pred             cCCCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +-.+.++.++|.|+.+ ++++.. .+.|...+.+ +   ..+..+.+.+ .+..-.|++..++.++++.-.++.+.++++
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G---~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-G---KVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEETT------EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-C---CEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            4445699999999755 555555 6777777764 2   2334444433 466889999988887777666899999998


Q ss_pred             CCCCccc------eeeee---cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---CeEEEe--------ecCCCCCe
Q psy17188        189 ASPTPRI------KAELT---SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---QTLVRQ--------FQGHTDGA  248 (504)
Q Consensus       189 ~~~~~~~------~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---~~~~~~--------~~~h~~~v  248 (504)
                      .......      ...+.   .+...+-.++|.+.++.|+.+-+..-..++.++.   ...+..        .......+
T Consensus        94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  173 (248)
T PF06977_consen   94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL  173 (248)
T ss_dssp             ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred             eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence            5432111      11111   2345588999999888788887777777776653   111111        11244568


Q ss_pred             EEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEE
Q psy17188        249 SCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  327 (504)
Q Consensus       249 ~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  327 (504)
                      .+++++|. +++++.......|..+|....-+..+.+.....       .....-.....|++.++|+..+++ +-+..+
T Consensus       174 S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~-------gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy  245 (248)
T PF06977_consen  174 SGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFH-------GLSKDIPQPEGIAFDPDGNLYIVS-EPNLFY  245 (248)
T ss_dssp             -EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGG-------G-SS---SEEEEEE-TT--EEEEE-TTTEEE
T ss_pred             cceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCccc-------CcccccCCccEEEECCCCCEEEEc-CCceEE
Confidence            89999995 556777778889999995443333333322100       000112346789999999755554 555555


Q ss_pred             EE
Q psy17188        328 IW  329 (504)
Q Consensus       328 v~  329 (504)
                      +|
T Consensus       246 ~f  247 (248)
T PF06977_consen  246 RF  247 (248)
T ss_dssp             EE
T ss_pred             Ee
Confidence            44

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.95  E-value=0.0085  Score=57.24  Aligned_cols=229  Identities=19%  Similarity=0.199  Sum_probs=115.1

Q ss_pred             eEEEEEccCCCEEEEE-cCCC----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188        248 ASCIDISADGTKLWTG-GLDN----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~-~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  322 (504)
                      +....++|++++++.+ +..|    .|+++|+.+++..                ...-.......+.|.++++.|+....
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l----------------~d~i~~~~~~~~~W~~d~~~~~y~~~  189 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFL----------------PDGIENPKFSSVSWSDDGKGFFYTRF  189 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEE----------------EEEEEEEESEEEEECTTSSEEEEEEC
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCc----------------CCcccccccceEEEeCCCCEEEEEEe
Confidence            3467889999988754 3333    6999999999642                11111112234999999888776643


Q ss_pred             CC-----------cEEEEeCCCCCccceeeeccCCC--ceeeEEECCCCCCceeeeccCC--CeEEEEecCCCC-CCCcc
Q psy17188        323 AS-----------NLSIWDLASPTPRIKAELTSSAP--ACYALAISPDSKSPFFSSHHYK--SCVKVWDISQPG-SKTPV  386 (504)
Q Consensus       323 dg-----------~i~v~d~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~--~~i~i~d~~~~~-~~~~~  386 (504)
                      +.           .|+.|.+.+....-...+.....  ....+..+++++.+++.+.+..  ..+.+.++.... .....
T Consensus       190 ~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~  269 (414)
T PF02897_consen  190 DEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKP  269 (414)
T ss_dssp             STTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SE
T ss_pred             CcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCc
Confidence            33           37888887765442233333222  2568889999997544444333  467777776641 01111


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeC---CCcEEEeeCCCCCcc-eeecccCCCC--ceeEEEECCCCCEEEEe-eC
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPR-IKAELTSSAP--ACYALAISPDSKVCFSC-CS  459 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---dg~i~iwd~~~~~~~-~~~~~~~~~~--~v~~l~~s~~~~~l~s~-~~  459 (504)
                      ..+.  .....+....-+.++.+++....   ++.|...++.+.... ....+..+..  .+..+..  .+++|+.. -.
T Consensus       270 ~~l~--~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~  345 (414)
T PF02897_consen  270 KLLS--PREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRE  345 (414)
T ss_dssp             EEEE--ESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEE
T ss_pred             EEEe--CCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEE
Confidence            1111  11222222222224444444332   355777777766531 1213333333  3444443  45555544 44


Q ss_pred             CC--cEEEEEcCCcceEEEEee-cCCceEEEEEccCCCEE
Q psy17188        460 DG--NIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKL  496 (504)
Q Consensus       460 dg--~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l  496 (504)
                      ++  .|+++++..+.....+.. -.+.|..+...++++.+
T Consensus       346 ~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~  385 (414)
T PF02897_consen  346 NGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDEL  385 (414)
T ss_dssp             TTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEE
T ss_pred             CCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEE
Confidence            44  588899983444444432 23345555555555443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.94  E-value=0.0044  Score=52.64  Aligned_cols=238  Identities=13%  Similarity=0.144  Sum_probs=132.3

Q ss_pred             EEEEcCCCc-EEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-----CCcEEEEeCC
Q psy17188        118 AVTISNPTK-YVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLA  189 (504)
Q Consensus       118 ~v~~s~~~~-~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~iw~~~  189 (504)
                      .|+|+|... -++.+.  .....++|.+.......+...   ......-.=.|||||.+|...-.     -|.|-|||..
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~---~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r  148 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQ---EGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR  148 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecc---cCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence            466777543 334444  345678888775443332221   11111223379999999987633     3679999988


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeC------------------CCcEEEEECCCCeEEEee--c--CCCCC
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCS------------------DGNIAVWDLHNQTLVRQF--Q--GHTDG  247 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~~--~--~h~~~  247 (504)
                      . .....-++..|.-.-..+.|.+||+.++.+..                  .-++.+.|..+|+++.+.  .  .+...
T Consensus       149 ~-~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS  227 (366)
T COG3490         149 E-GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS  227 (366)
T ss_pred             c-ccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence            4 44456677777777788999999998887643                  112444454555544332  2  24456


Q ss_pred             eEEEEEccCCCEEEEEcCCCeE-----EEEE-CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        248 ASCIDISADGTKLWTGGLDNTV-----RSWD-LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~~dg~i-----~~wd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      |..++..+||..++-+-..|.-     .+=- ...+.++.+         +............|-+++.+.+..+++..+
T Consensus       228 iRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~---------~~pee~~~~~anYigsiA~n~~~glV~lTS  298 (366)
T COG3490         228 IRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFL---------DLPEEQTAAFANYIGSIAANRRDGLVALTS  298 (366)
T ss_pred             eeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCccc---------CCCHHHHHHHHhhhhheeecccCCeEEEec
Confidence            7888888888665554333310     0000 011111111         111222223456688888887666665555


Q ss_pred             C-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188        322 E-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       322 ~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      - .+...+||..++.......+.    .+..++....    -|+..+.+|.+.++.
T Consensus       299 P~GN~~vi~da~tG~vv~~a~l~----daaGva~~~~----gf~vssg~G~~~~~s  346 (366)
T COG3490         299 PRGNRAVIWDAATGAVVSEAALP----DAAGVAAAKG----GFAVSSGQGRIIFYS  346 (366)
T ss_pred             CCCCeEEEEEcCCCcEEeccccc----ccccceeccC----ceEEecCCceEEecc
Confidence            4 445789999998544333322    2222322222    356666677777764

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.90  E-value=0.0081  Score=53.73  Aligned_cols=226  Identities=12%  Similarity=0.119  Sum_probs=128.0

Q ss_pred             EEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-cce
Q psy17188        120 TISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIK  196 (504)
Q Consensus       120 ~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~  196 (504)
                      .|.++...|.-..  .+.|.-|+..++..    ..+   ...+.+.++..-.++..|+++.  ..+.+++.+++.. ...
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~----~~~---~~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~  101 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKK----RVF---PSPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLL  101 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCce----EEE---ECCCCcccceeecCCCeEEEEc--cccEEEeccCCceeEEe
Confidence            3556666555444  78899998875421    111   2344455555555555666653  3467777654443 111


Q ss_pred             eeee-c-CcCceEEEEECCCCCEEEEEeC---------CCcEEEEECC-CCeEEEeecCCCCCeEEEEEccCCCEEEEEc
Q psy17188        197 AELT-S-SAPACYALAISPDSKVCFSCCS---------DGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       197 ~~~~-~-~~~~v~~~~~s~~~~~l~~~~~---------dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      .... + .....+.+...|+|.+.++...         ...-.+|.+. .+..++.+..+-..-+.|+|+||++.|+.+.
T Consensus       102 ~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aD  181 (307)
T COG3386         102 AEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVAD  181 (307)
T ss_pred             ccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEe
Confidence            1111 1 1233567788889886665433         0112455544 5677777776667778999999998777665


Q ss_pred             C-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCCccceeee
Q psy17188        265 L-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       265 ~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~  342 (504)
                      . .+.|..+++......+        .............+..-.++...+|++-+++..+| .|.+|+.. ++......+
T Consensus       182 T~~~~i~r~~~d~~~g~~--------~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~l  252 (307)
T COG3386         182 TPANRIHRYDLDPATGPI--------GGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKL  252 (307)
T ss_pred             CCCCeEEEEecCcccCcc--------CCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEEC
Confidence            4 4778888776311100        00000122222456667788888998776555554 89999987 543433343


Q ss_pred             ccCCCceeeEEECC-CCCCceeeec
Q psy17188        343 TSSAPACYALAISP-DSKSPFFSSH  366 (504)
Q Consensus       343 ~~~~~~i~~~~~~~-~~~~~~~~~~  366 (504)
                      +  ...+.+++|-- +.+. ++++.
T Consensus       253 P--~~~~t~~~FgG~~~~~-L~iTs  274 (307)
T COG3386         253 P--VKRPTNPAFGGPDLNT-LYITS  274 (307)
T ss_pred             C--CCCCccceEeCCCcCE-EEEEe
Confidence            3  24667777654 3443 44444

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.87  E-value=0.017  Score=51.33  Aligned_cols=282  Identities=13%  Similarity=0.151  Sum_probs=127.1

Q ss_pred             ecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC-CCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        110 LSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ-RDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +.-...+..|.|..+..-.++|..+.|  +....++..-......... ..-...++.|..+ +.+++| ..+ +.+...
T Consensus        13 l~t~~~l~dV~F~d~~~G~~VG~~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~ivG-~~g-~ll~T~   87 (302)
T PF14870_consen   13 LPTDKPLLDVAFVDPNHGWAVGAYGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIVG-EPG-LLLHTT   87 (302)
T ss_dssp             -S-SS-EEEEEESSSS-EEEEETTTEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEEE-ETT-EEEEES
T ss_pred             cCCCCceEEEEEecCCEEEEEecCCEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEEc-CCc-eEEEec
Confidence            345668899999987777888887754  4444433222222111111 1234677888643 344444 444 333443


Q ss_pred             CCCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-Ce-EEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        189 ASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QT-LVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       189 ~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      +.++.=....+. .-......+....++..++ .+..|.|  |...+ |+ -......-.+.+..+.-++||+++++++.
T Consensus        88 DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~i--y~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~  164 (302)
T PF14870_consen   88 DGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAI--YRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSR  164 (302)
T ss_dssp             STTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--E--EEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETT
T ss_pred             CCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcE--EEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECc
Confidence            433321111111 1112233343333443333 3344543  33332 22 22223445577888889999998888887


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc---eeee
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI---KAEL  342 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~---~~~~  342 (504)
                      -..+.-||.......               .........|.++.|.|++...+++ +.|.|+.=+........   ....
T Consensus       165 G~~~~s~~~G~~~w~---------------~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~  228 (302)
T PF14870_consen  165 GNFYSSWDPGQTTWQ---------------PHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPI  228 (302)
T ss_dssp             SSEEEEE-TT-SS-E---------------EEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TT
T ss_pred             ccEEEEecCCCccce---------------EEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCc
Confidence            777778886654332               2223345779999999998866655 88888887722111011   1111


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ......+..+++.++..  ++++++.. .+. ...+.++.-+..  .........+..+.|.++.+-++.| .+|.|.-|
T Consensus       229 ~~~~~~~ld~a~~~~~~--~wa~gg~G-~l~-~S~DgGktW~~~--~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  229 KTNGYGILDLAYRPPNE--IWAVGGSG-TLL-VSTDGGKTWQKD--RVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY  301 (302)
T ss_dssp             SS--S-EEEEEESSSS---EEEEESTT--EE-EESSTTSS-EE---GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             ccCceeeEEEEecCCCC--EEEEeCCc-cEE-EeCCCCccceEC--ccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence            22334578889998876  66655544 332 222222211111  1111234456788888766666665 67766544

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.86  E-value=0.027  Score=53.23  Aligned_cols=152  Identities=13%  Similarity=0.161  Sum_probs=89.2

Q ss_pred             CcEEEEEEcCCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCEEEEecCCCcEEEE
Q psy17188        114 EVVCAVTISNPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGGEASNLSIW  186 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iw  186 (504)
                      .+|..++|....+.+.+.-   +|.+++=|-.            ..+.-..|..+.|.|-    ...|++......|.+|
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds~------------viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVW   87 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDSK------------VIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVW   87 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccCCcc------------EeeccceeeeeeecCcccCCCCceEEEeccceEEEE
Confidence            4677788875555555532   4444433311            1134456899999993    3345555567899999


Q ss_pred             eCCCCC---ccceeeeecCc---Cc--eEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCCCeEEEEEccC
Q psy17188        187 DLASPT---PRIKAELTSSA---PA--CYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       187 ~~~~~~---~~~~~~~~~~~---~~--v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                      .+....   .+.......+-   -+  -..+.|+|....|++-.....-.++++.  +.+....++ ..+-|.|.+|.+|
T Consensus        88 qL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~D  166 (671)
T PF15390_consen   88 QLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKD  166 (671)
T ss_pred             EeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCc
Confidence            986221   11111111110   01  1357899998888776665544555554  334444454 6788999999999


Q ss_pred             CCEEEEEcC-CCeEEEEECCCCc
Q psy17188        257 GTKLWTGGL-DNTVRSWDLREGC  278 (504)
Q Consensus       257 ~~~l~s~~~-dg~i~~wd~~~~~  278 (504)
                      |++|+.+-. .=.-++||-....
T Consensus       167 G~RLVVAvGSsLHSyiWd~~qKt  189 (671)
T PF15390_consen  167 GQRLVVAVGSSLHSYIWDSAQKT  189 (671)
T ss_pred             CCEEEEEeCCeEEEEEecCchhh
Confidence            998776543 3356788865543

>KOG4640|consensus

Probab=97.85  E-value=0.00011  Score=68.81  Aligned_cols=74  Identities=16%  Similarity=0.195  Sum_probs=67.5

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE-EEEEccCCCEEEEEcCCCeEEEEECCCCc
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      ..+.-+.|+|.-.++|.+..+|.|.+..+. .+.+.++.-|...++ +++|.|||+.|+.|-.||+|++.|..++.
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~   95 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG   95 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence            347789999999999999999999999988 777888887888887 99999999999999999999999999886

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.82  E-value=0.024  Score=52.01  Aligned_cols=240  Identities=16%  Similarity=0.186  Sum_probs=104.9

Q ss_pred             CCcEEEEec--CCeEEEEeCCCCCCCCceeeeee----cC--CCCceEEEEEccCCCEEEEec------CCCcEEEEeCC
Q psy17188        124 PTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDC----LQ--RDNYIRSVKLLPDGRTLIVGG------EASNLSIWDLA  189 (504)
Q Consensus       124 ~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~----~~--~~~~v~~~~~s~~~~~l~~~~------~dg~i~iw~~~  189 (504)
                      +.++|+..+  .+.|.|.|+.+......+.....    ..  .-..-..+-..|+|+.++++-      .-|.+.++|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            456777666  78999999986443333322211    00  112233444557898888852      23457777776


Q ss_pred             CCCccceeeeec-CcCceEEEEECCCCCEEEEEeC--------------------CCcEEEEECCCCeEEEeecCCCC--
Q psy17188        190 SPTPRIKAELTS-SAPACYALAISPDSKVCFSCCS--------------------DGNIAVWDLHNQTLVRQFQGHTD--  246 (504)
Q Consensus       190 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--------------------dg~i~iwd~~~~~~~~~~~~h~~--  246 (504)
                      +.+..-...... ...--+.+.|.|..+.+++...                    ..++.+||+.+.+.++++.--..  
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            544321111111 1223466778888888887652                    35799999999999999875432  


Q ss_pred             CeEEEEEccC--CCE-EEEEcCCCeEEEEEC-CCCceE---EEeecCCCCCCC-ccc--ceecccCCceEEEEEcCCCCE
Q psy17188        247 GASCIDISAD--GTK-LWTGGLDNTVRSWDL-REGCVK---VWDISQPGSKTP-VSQ--LDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       247 ~v~~~~~~~~--~~~-l~s~~~dg~i~~wd~-~~~~~~---~~~~~~~~~~~~-~~~--~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .+..+.|..+  ..+ ++.+....+|..|-- +.++..   +.++........ +..  ........-|+.+.+|.|.++
T Consensus       246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf  325 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF  325 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred             ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence            3566777654  333 333334455555543 555432   222221110000 000  001112355889999999999


Q ss_pred             EEEEe-CCCcEEEEeCCCCCcc-ceeeec----------------cCCCceeeEEECCCCCCcee
Q psy17188        317 LIVGG-EASNLSIWDLASPTPR-IKAELT----------------SSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       317 l~~~~-~dg~i~v~d~~~~~~~-~~~~~~----------------~~~~~i~~~~~~~~~~~~~~  363 (504)
                      |.+++ ..|.++.||+...... ...+..                .-.+...-+..|.||+++++
T Consensus       326 LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv  390 (461)
T PF05694_consen  326 LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV  390 (461)
T ss_dssp             EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred             EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence            98876 4789999999875422 221111                01123456778888887443

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.80  E-value=0.0031  Score=63.00  Aligned_cols=148  Identities=19%  Similarity=0.240  Sum_probs=99.8

Q ss_pred             CCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCC-eEEEEEcc-----CCCEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        214 DSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISA-----DGTKLWTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       214 ~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~~~-----~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      +.++|+.- .....|+-.|++.|+.+..+..|... |..++-..     ....-+.|-.+..+..||++-..-++...  
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~--  569 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS--  569 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec--
Confidence            33444443 34578999999999999999877654 55543221     12345667778899999998643111100  


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                              ............|++-+.+| +|++|+.+|.|++||-..  ......+++-..+|..+..+.||++ +++++
T Consensus       570 --------~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g--~~AKT~lp~lG~pI~~iDvt~DGkw-ilaTc  637 (794)
T PF08553_consen  570 --------QSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLG--KRAKTALPGLGDPIIGIDVTADGKW-ILATC  637 (794)
T ss_pred             --------cccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccc--hhhhhcCCCCCCCeeEEEecCCCcE-EEEee
Confidence                    12222345567888888777 599999999999999533  2455566677789999999999995 33433


Q ss_pred             cCCCeEEEEec
Q psy17188        367 HYKSCVKVWDI  377 (504)
Q Consensus       367 ~~~~~i~i~d~  377 (504)
                        +..+.+++.
T Consensus       638 --~tyLlLi~t  646 (794)
T PF08553_consen  638 --KTYLLLIDT  646 (794)
T ss_pred             --cceEEEEEE
Confidence              566777765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.80  E-value=0.004  Score=61.24  Aligned_cols=209  Identities=14%  Similarity=0.103  Sum_probs=106.8

Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc------CCC--eEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG------LDN--TVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      +|.+.-.+-..-..+.-..+....+...+++|+|+.++..-      .|.  .|.+++..... +              .
T Consensus       328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~--------------~  392 (591)
T PRK13616        328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-V--------------Q  392 (591)
T ss_pred             CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-e--------------e
Confidence            55554443222222222223334678899999999877654      233  44444542211 1              1


Q ss_pred             ceecccCCceEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTLIVGGEA------------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                      +   ........-.|+|+|+.|++....            +.+.+.++..+....     .....|..+.|+|||.++.+
T Consensus       393 l---t~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~  464 (591)
T PRK13616        393 V---LEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAM  464 (591)
T ss_pred             e---ecCCCCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEE
Confidence            1   112236778899998877776432            223333333322111     22347999999999998666


Q ss_pred             eeccCCCeEEEEecCC--CCCCCccccc-ccc-cCCCceEEEEEcCCCCEEEEeeCCCcEEEee--CCCCCcceeecccC
Q psy17188        364 SSHHYKSCVKVWDISQ--PGSKTPVSQL-DCL-QRDNYIRSVKLLPDGRTLIVGGEASNLSIWD--LASPTPRIKAELTS  437 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~--~~~~~~~~~~-~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd--~~~~~~~~~~~~~~  437 (504)
                      +.   ++.|.+--+..  .+. ..+... ... .....+..+.|..++.++ ++..++.-.+|.  +...... ......
T Consensus       465 i~---~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~-~~~~~n  538 (591)
T PRK13616        465 II---GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSD-ALPSRN  538 (591)
T ss_pred             EE---CCEEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcccc-ccCCCC
Confidence            66   35666632221  111 111111 111 122335789999999855 555555444454  4422211 112222


Q ss_pred             CCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        438 SAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       438 ~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                      ....+..++-+++  .++....+|.+
T Consensus       539 ~~~~v~~vaa~~~--~iyv~~~~g~~  562 (591)
T PRK13616        539 LSAPVVAVAASPS--TVYVTDARAVL  562 (591)
T ss_pred             ccCceEEEecCCc--eEEEEcCCceE
Confidence            3455666676653  45555666633

>KOG4640|consensus

Probab=97.76  E-value=0.00015  Score=67.88  Aligned_cols=94  Identities=17%  Similarity=0.119  Sum_probs=76.6

Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      ...|.-+.|+|.-..+|.+..+|.|.+..+.-   .....++-+...++ +++|.|||+.|++|-.||+|++.|+.++..
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~---qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNW---QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEecc---ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            45688899999999999999999999998872   23555665666666 999999999999999999999999999987


Q ss_pred             EEeec-CCCCCeEEEEEcc
Q psy17188        238 VRQFQ-GHTDGASCIDISA  255 (504)
Q Consensus       238 ~~~~~-~h~~~v~~~~~~~  255 (504)
                      +..+. .-...|.++.|.+
T Consensus        97 l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   97 LVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             eeccccccccchheeeccc
Confidence            77632 2456778888864

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.75  E-value=0.0034  Score=61.70  Aligned_cols=151  Identities=15%  Similarity=0.122  Sum_probs=88.8

Q ss_pred             CceEEEEEccCCCEEEEec------CCC--cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-------
Q psy17188        160 NYIRSVKLLPDGRTLIVGG------EAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-------  224 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~------~dg--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------  224 (504)
                      ..+.+.+++|||+.++...      .|.  .|.+++... ..  .....+.  ..+.-.|+|||+.|++....       
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~--~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~  424 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VA--VQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVI  424 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cc--eeeecCC--CCCCceECCCCCceEEEecCcceEEEe
Confidence            4678999999999988765      243  455555422 21  2222222  37788999998877776432       


Q ss_pred             -----CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEE---EECCCCceEEEeecCCCCCCCcccc
Q psy17188        225 -----GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRS---WDLREGCVKVWDISQPGSKTPVSQL  296 (504)
Q Consensus       225 -----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~---wd~~~~~~~~~~~~~~~~~~~~~~~  296 (504)
                           +.+.+.+++.++...   ...+.|..+.|+|||.+++... ++.|++   -....|...+-+           ..
T Consensus       425 ~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~-----------~~  489 (591)
T PRK13616        425 RDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTN-----------PR  489 (591)
T ss_pred             ccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecc-----------cE
Confidence                 233333444433322   2356799999999999888765 467766   444444322100           11


Q ss_pred             ee-cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        297 DC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       297 ~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      .. ......+.++.|..++.++ ++..++...+|.+
T Consensus       490 ~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        490 EVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             EeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence            11 1223335788999999854 5555554445543

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.73  E-value=0.07  Score=54.29  Aligned_cols=209  Identities=15%  Similarity=0.168  Sum_probs=111.3

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC------ceEEEEEC----------------CCCCEEEEEeCCCcEE
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP------ACYALAIS----------------PDSKVCFSCCSDGNIA  228 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~------~v~~~~~s----------------~~~~~l~~~~~dg~i~  228 (504)
                      +..|+.++.++.|.-.|..+++............      .+..+++-                ..+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            4456666667777777777776544433322111      11222221                1334788888999999


Q ss_pred             EEECCCCeEEEeecCCCCCeE-------------EEEEcc--CCCEEEEEcC----------CCeEEEEECCCCceEEEe
Q psy17188        229 VWDLHNQTLVRQFQGHTDGAS-------------CIDISA--DGTKLWTGGL----------DNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~-------------~~~~~~--~~~~l~s~~~----------dg~i~~wd~~~~~~~~~~  283 (504)
                      -.|.++|+.+..+. ..+.|.             .+.-.|  .+..++.++.          +|.|+-+|.++|+. +|.
T Consensus       274 ALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl-~W~  351 (764)
T TIGR03074       274 ALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGAL-VWA  351 (764)
T ss_pred             EEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcE-eeE
Confidence            99999999987764 222221             111122  1335666642          68899999999985 455


Q ss_pred             ecCC--CCCCCccccee--cccCCceEEEEEcCCCCEEEEEeC------------------CCcEEEEeCCCCCccceee
Q psy17188        284 ISQP--GSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGE------------------ASNLSIWDLASPTPRIKAE  341 (504)
Q Consensus       284 ~~~~--~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~v~d~~~~~~~~~~~  341 (504)
                      ....  ........-..  ......=..++++++...++.+..                  .+.|.-.|.++++.+...+
T Consensus       352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q  431 (764)
T TIGR03074       352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ  431 (764)
T ss_pred             EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence            4422  11111100000  011111134556665555554321                  2346667777776555544


Q ss_pred             eccCCC-------ceeeEEECC-CC-CCceeeeccCCCeEEEEecCCCC
Q psy17188        342 LTSSAP-------ACYALAISP-DS-KSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       342 ~~~~~~-------~i~~~~~~~-~~-~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      ...|..       ...-+.+.. ++ ....++.+..+|.+.++|.++++
T Consensus       432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGE  480 (764)
T ss_pred             ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCC
Confidence            433311       111122222 44 23468888889999999887653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.73  E-value=0.0049  Score=44.71  Aligned_cols=100  Identities=18%  Similarity=0.319  Sum_probs=68.2

Q ss_pred             eEEEEEcc-CC---CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        162 IRSVKLLP-DG---RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       162 v~~~~~s~-~~---~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      |+++++.. ++   +.|++|++|..|++|+-+    ....++.. ...|++++-... ..++.+..+|+|-+|+-  .+.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~----e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD----EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQR   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC----cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC--cce
Confidence            56777665 22   589999999999999854    23444443 345777777665 57888999999999975  334


Q ss_pred             EEeecCCCCCeEEEEEcc-C--C-CEEEEEcCCCeEE
Q psy17188        238 VRQFQGHTDGASCIDISA-D--G-TKLWTGGLDNTVR  270 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~-~--~-~~l~s~~~dg~i~  270 (504)
                      +...+. ...+.++++.. +  | ..|++|-.+|.|-
T Consensus        74 lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            455553 33466776654 2  2 2688888888764

>KOG4499|consensus

Probab=97.73  E-value=0.018  Score=47.61  Aligned_cols=217  Identities=14%  Similarity=0.171  Sum_probs=116.0

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCC---CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADG---TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~---~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                      .++.+--..+.|.-||..+.+..+. +.+.  +..++.+--.+   .+.+.++..-.|.-||-.....+++..-.     
T Consensus        28 sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~-----  100 (310)
T KOG4499|consen   28 SLLYVDIEAGEVHRYDIEQNKVYRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLF-----  100 (310)
T ss_pred             eEEEEEeccCceehhhhhhhheEEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeecc-----
Confidence            3455545567777788877544332 2221  13333332222   23344444444555775444433332211     


Q ss_pred             CcccceecccCCceEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                         .+.........+.-..+|+|+++.-...         .|.++.|-....    .......-..-..++|+.+.+. +
T Consensus       101 ---ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~----v~~i~~~v~IsNgl~Wd~d~K~-f  172 (310)
T KOG4499|consen  101 ---EVQPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQ----VELIWNCVGISNGLAWDSDAKK-F  172 (310)
T ss_pred             ---ccCchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCCC----ceeeehhccCCccccccccCcE-E
Confidence               1111222445566678999998443222         234455543321    1111111223457888877665 6


Q ss_pred             eeeccCCCeEEEEec--CCCCCCCccccccccc----CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        363 FSSHHYKSCVKVWDI--SQPGSKTPVSQLDCLQ----RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       363 ~~~~~~~~~i~i~d~--~~~~~~~~~~~~~~~~----~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      +.+-+.+-.|.-||.  .++........+....    .....-.+++..+|.+.++.-..++|...|..+++.+....++
T Consensus       173 Y~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP  252 (310)
T KOG4499|consen  173 YYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLP  252 (310)
T ss_pred             EEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcC
Confidence            677777888887884  3332221111111111    1111235666778888888888899999999999887777666


Q ss_pred             CCCCceeEEEECC
Q psy17188        437 SSAPACYALAISP  449 (504)
Q Consensus       437 ~~~~~v~~l~~s~  449 (504)
                        ...+++++|--
T Consensus       253 --t~qitsccFgG  263 (310)
T KOG4499|consen  253 --TPQITSCCFGG  263 (310)
T ss_pred             --CCceEEEEecC
Confidence              56689999964

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.72  E-value=0.0046  Score=44.87  Aligned_cols=100  Identities=22%  Similarity=0.317  Sum_probs=68.2

Q ss_pred             eEEEEECC---CC-CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEE
Q psy17188        206 CYALAISP---DS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV  281 (504)
Q Consensus       206 v~~~~~s~---~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~  281 (504)
                      |+++++..   || +.|++|+.|..|++|+-  .+.+..+. -.+.|++++-... ..++.+-.+|+|-+|+-..   ++
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~---Rl   74 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ---RL   74 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc---ee
Confidence            56666654   33 48999999999999974  46677776 5567888877765 5799999999999997643   44


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcC---CC-CEEEEEeCCCcEE
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DG-RTLIVGGEASNLS  327 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~dg~i~  327 (504)
                      |.+..               ...+.++.+..   +| .-|++|-.+|.|.
T Consensus        75 WRiKS---------------K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   75 WRIKS---------------KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeecc---------------CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            44322               22244454433   33 3588888888764

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.67  E-value=0.029  Score=48.10  Aligned_cols=327  Identities=15%  Similarity=0.178  Sum_probs=167.8

Q ss_pred             ecCC-CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        110 LSHG-EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       110 ~~h~-~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      .+|- ..|.++.....-.++..|.  .+.+.|+...........+....-.+.+..+.++  +++...+..+.-++|.|+
T Consensus        38 vghfg~~vsavdv~~~ya~v~qG~--~l~i~ditn~~~~t~~~l~~~i~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDI  113 (370)
T COG5276          38 VGHFGKGVSAVDVRGAYAYVGQGF--ILAILDITNVSLQTHDVLLSVINARDLFADVRVS--EEYVYVADWSSGLRIVDI  113 (370)
T ss_pred             eeeccCCcccccccccccccccCc--eEeeccccCcccccCcceEEEEehhhhhheeEec--ccEEEEEcCCCceEEEec
Confidence            3564 5666666654444443332  3444444332212222222223445667788887  556777777888999999


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      .++........-...+--.++.  -.|++..++..|.-+.+.|+.+.   ++...+.........++.+  |++-..+..
T Consensus       114 S~P~sP~~~~~lnt~gyaygv~--vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~  189 (370)
T COG5276         114 STPDSPTLIGFLNTDGYAYGVY--VSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWR  189 (370)
T ss_pred             cCCCCcceeccccCCceEEEEE--ecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEe
Confidence            8766432222222222233444  36778888887777888888764   4444555444545666666  677778888


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      |+-+.+.|+....-..             .+........+.++..+++-.+++...  .-+.+-|....+.....-....
T Consensus       190 d~GL~ivDVSnp~sPv-------------li~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~~ssp~~~gsyet  254 (370)
T COG5276         190 DGGLTIVDVSNPHSPV-------------LIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSGPSSPTVFGSYET  254 (370)
T ss_pred             CCCeEEEEccCCCCCe-------------EEEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCCCCCceEeecccc
Confidence            9999999987654111             112222233677787777765555543  3466667666543333322222


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ..+...-.+.-.++  +......+.-+.+-|++.+.............  ..-..+..+  +.++..+..+ ...+-+..
T Consensus       255 ~~p~~~s~v~Vs~~--~~Yvadga~gl~~idisnp~spfl~ss~~t~g--~~a~gi~ay--~~y~yiadkn-~g~vV~~s  327 (370)
T COG5276         255 SNPVSISTVPVSGE--YAYVADGAKGLPIIDISNPPSPFLSSSLDTAG--YQAAGIRAY--GNYNYIADKN-TGAVVDAS  327 (370)
T ss_pred             CCcccccceecccc--eeeeeccccCceeEeccCCCCCchhccccCCC--ccccceEEe--cCeeEeccCC-ceEEEeCC
Confidence            22222112222233  33333445556667776654333222221111  111122222  3444444433 34444444


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      ..+..-  ...+....+.+...+-+.+.+.+...++.+.||+.
T Consensus       328 ~~s~m~--~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~  368 (370)
T COG5276         328 PPSMMD--KRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEY  368 (370)
T ss_pred             Chhhcc--cccCcceEeeecceEEEeeEEEEeecCCCEEEEEe
Confidence            322111  11122222333344445567778888888888875

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.64  E-value=0.05  Score=50.00  Aligned_cols=231  Identities=17%  Similarity=0.199  Sum_probs=103.5

Q ss_pred             CCCEEEEec-CCCcEEEEeCCCCC--ccceeeeec---Cc----CceEEEEECCCCCEEEEEeC------CCcEEEEECC
Q psy17188        170 DGRTLIVGG-EASNLSIWDLASPT--PRIKAELTS---SA----PACYALAISPDSKVCFSCCS------DGNIAVWDLH  233 (504)
Q Consensus       170 ~~~~l~~~~-~dg~i~iw~~~~~~--~~~~~~~~~---~~----~~v~~~~~s~~~~~l~~~~~------dg~i~iwd~~  233 (504)
                      +.++|+..+ ..+.|+|.|+.+..  ++....+..   +.    ..-..+..-|+|+.++++-.      -|-+.+.|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            456777765 67889999998532  222222221   00    11223344578888887632      2458888988


Q ss_pred             CCeEEEeecCCC---CCeEEEEEccCCCEEEEEcC--------------------CCeEEEEECCCCceEEEeecCCCCC
Q psy17188        234 NQTLVRQFQGHT---DGASCIDISADGTKLWTGGL--------------------DNTVRSWDLREGCVKVWDISQPGSK  290 (504)
Q Consensus       234 ~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~--------------------dg~i~~wd~~~~~~~~~~~~~~~~~  290 (504)
                      +.+.........   .--..+.|.|..+.++|...                    ..++.+||+.+.+...         
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q---------  236 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQ---------  236 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEE---------
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEee---------
Confidence            887777665422   23466778888888888642                    3589999999987532         


Q ss_pred             CCcccceecccCCceEEEEEcC--CCCEEEEEe-CCCcEEEE-eCCCCCccceee--ecc-----------------CCC
Q psy17188        291 TPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGG-EASNLSIW-DLASPTPRIKAE--LTS-----------------SAP  347 (504)
Q Consensus       291 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~-~dg~i~v~-d~~~~~~~~~~~--~~~-----------------~~~  347 (504)
                          .+..-.....+..+.|..  +..+=++++ -..+|..| ..+.++......  +..                 -..
T Consensus       237 ----~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~  312 (461)
T PF05694_consen  237 ----TIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPP  312 (461)
T ss_dssp             ----EEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE--
T ss_pred             ----EEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCC
Confidence                222222222345566654  344433332 23334433 323333221111  111                 134


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc--------------cCCCceEEEEEcCCCCEEEEe
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--------------QRDNYIRSVKLLPDGRTLIVG  413 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------------~~~~~i~~~~~s~~g~~l~~~  413 (504)
                      -++.+.+|.|.+. ++++.-..|.++.||+..+...+...+...-              .-.+...-+..|-||++|++.
T Consensus       313 LitDI~iSlDDrf-LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvT  391 (461)
T PF05694_consen  313 LITDILISLDDRF-LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVT  391 (461)
T ss_dssp             ----EEE-TTS-E-EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE
T ss_pred             ceEeEEEccCCCE-EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEE
Confidence            5789999999997 6677778999999999886554444332211              112233567888888888875


Q ss_pred             e
Q psy17188        414 G  414 (504)
Q Consensus       414 ~  414 (504)
                      +
T Consensus       392 n  392 (461)
T PF05694_consen  392 N  392 (461)
T ss_dssp             -
T ss_pred             e
Confidence            3

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG4441|consensus

Probab=97.64  E-value=0.023  Score=56.00  Aligned_cols=230  Identities=18%  Similarity=0.236  Sum_probs=124.3

Q ss_pred             CCCcEEEEec-C------CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC------CcEEEEeCC
Q psy17188        123 NPTKYVYTGG-K------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLA  189 (504)
Q Consensus       123 ~~~~~l~~~~-d------~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iw~~~  189 (504)
                      ..+.+++.|+ +      ..+..+|..++.    ...+........-.+++.. ++...++|+.|      .++..||..
T Consensus       283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~----w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~  357 (571)
T KOG4441|consen  283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNE----WSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPR  357 (571)
T ss_pred             CCCeEEEECCCCCCCcccceeEEecCCcCc----EeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCC
Confidence            3455666666 4      467888877641    1111111233334445544 45777888888      358889988


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc-----EEEEECCCCeEEEeecCCCCCeEEEEEc-cCCCEEEEE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN-----IAVWDLHNQTLVRQFQGHTDGASCIDIS-ADGTKLWTG  263 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~  263 (504)
                      ..+......+............  +|.+.++|+.||.     |-.||..+.+-...-. ......+.... -+|...++|
T Consensus       358 ~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~-m~~~r~~~gv~~~~g~iYi~G  434 (571)
T KOG4441|consen  358 TNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP-MLTRRSGHGVAVLGGKLYIIG  434 (571)
T ss_pred             CCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCC-CCcceeeeEEEEECCEEEEEc
Confidence            8775544444433332222222  7778888988864     7788877654322221 11122222222 257777888


Q ss_pred             cCCC------eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc-----EEEEeCC
Q psy17188        264 GLDN------TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-----LSIWDLA  332 (504)
Q Consensus       264 ~~dg------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~v~d~~  332 (504)
                      +.++      ++..||..+++....   .        ..   .....-..++. -++...++|+.|+.     +..||..
T Consensus       435 G~~~~~~~l~sve~YDP~t~~W~~~---~--------~M---~~~R~~~g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~  499 (571)
T KOG4441|consen  435 GGDGSSNCLNSVECYDPETNTWTLI---A--------PM---NTRRSGFGVAV-LNGKIYVVGGFDGTSALSSVERYDPE  499 (571)
T ss_pred             CcCCCccccceEEEEcCCCCceeec---C--------Cc---ccccccceEEE-ECCEEEEECCccCCCccceEEEEcCC
Confidence            8654      578888888875321   1        11   11111111222 25677778877763     7889998


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC-----eEEEEecCC
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-----CVKVWDISQ  379 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~i~i~d~~~  379 (504)
                      +.++............+....+.  +.  +++.|+.++     +|..||..+
T Consensus       500 ~~~W~~v~~m~~~rs~~g~~~~~--~~--ly~vGG~~~~~~l~~ve~ydp~~  547 (571)
T KOG4441|consen  500 TNQWTMVAPMTSPRSAVGVVVLG--GK--LYAVGGFDGNNNLNTVECYDPET  547 (571)
T ss_pred             CCceeEcccCccccccccEEEEC--CE--EEEEecccCccccceeEEcCCCC
Confidence            88766654444333332222222  22  677777665     355565443

>smart00320 WD40 WD40 repeats

Probab=97.63  E-value=0.00021  Score=41.23  Aligned_cols=39  Identities=31%  Similarity=0.606  Sum_probs=34.3

Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ++.+..+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778899999999999989999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2444|consensus

Probab=97.63  E-value=0.0002  Score=58.46  Aligned_cols=142  Identities=11%  Similarity=0.183  Sum_probs=80.2

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCce
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  206 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v  206 (504)
                      +++++.|+.|+-+++......-  ....  -+...   .....-+..+++|+.+|.|.+|+...................
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~--rse~--~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~  105 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESC--RSER--FIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESID  105 (238)
T ss_pred             hccccCCcccccchhhhhhhhh--hhhh--hhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhcccccce
Confidence            5666778888888765421100  0000  11111   111224567999999999999998732221111112222222


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CCeEEEEEccCCCEEEEE--cCCCeEEEEECC
Q psy17188        207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTG--GLDNTVRSWDLR  275 (504)
Q Consensus       207 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~--~~dg~i~~wd~~  275 (504)
                      ..+.-..++.+..+++.||.|+.|++.-.+.+.....|. .++..+.....++.++.+  |.|..++.|++.
T Consensus       106 ~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  106 LGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             eccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence            223333355688899999999999999888888777777 444444444444444444  455555555544

>PHA02713 hypothetical protein; Provisional

Probab=97.62  E-value=0.0087  Score=59.07  Aligned_cols=222  Identities=11%  Similarity=0.143  Sum_probs=109.4

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEEe--ecCCCCCeEEEEE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDI  253 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~  253 (504)
                      .+..||..+.+......++..... .+++. -++...+.|+.+      ..+..||..+.+-...  +....... +++ 
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-  348 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-  348 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-
Confidence            577888877654433333222211 12222 266677777753      3477889887653221  11111111 222 


Q ss_pred             ccCCCEEEEEcCCC-----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----
Q psy17188        254 SADGTKLWTGGLDN-----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----  323 (504)
Q Consensus       254 ~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----  323 (504)
                      .-+++..+.|+.++     .+..||+.+++...   ..+        ...  .......+.  -+++..+.|+.+     
T Consensus       349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~---~~~--------mp~--~r~~~~~~~--~~g~IYviGG~~~~~~~  413 (557)
T PHA02713        349 VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKM---LPD--------MPI--ALSSYGMCV--LDQYIYIIGGRTEHIDY  413 (557)
T ss_pred             EECCEEEEECCcCCCCCCceEEEEECCCCeEEE---CCC--------CCc--ccccccEEE--ECCEEEEEeCCCccccc
Confidence            22577778888764     47888988775421   111        000  001111122  256677777654     


Q ss_pred             ------------------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC------CeEEEEecCC
Q psy17188        324 ------------------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK------SCVKVWDISQ  379 (504)
Q Consensus       324 ------------------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~i~i~d~~~  379 (504)
                                        ..+..||..+.++.....+....... +++ .-+++  +++.|+.+      ..+..||..+
T Consensus       414 ~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~-~~~-~~~~~--IYv~GG~~~~~~~~~~ve~Ydp~~  489 (557)
T PHA02713        414 TSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRP-GVV-SHKDD--IYVVCDIKDEKNVKTCIFRYNTNT  489 (557)
T ss_pred             ccccccccccccccccccceEEEECCCCCeEeecCCCCcccccC-cEE-EECCE--EEEEeCCCCCCccceeEEEecCCC
Confidence                              24778888877655444333222121 122 22233  55556543      2467788765


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC--cEEEeeCCCCCcc
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTPR  430 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg--~i~iwd~~~~~~~  430 (504)
                      ...-.....+..  ..... .++. -+++..++|+.++  .+..||..+.+..
T Consensus       490 ~~~W~~~~~m~~--~r~~~-~~~~-~~~~iyv~Gg~~~~~~~e~yd~~~~~W~  538 (557)
T PHA02713        490 YNGWELITTTES--RLSAL-HTIL-HDNTIMMLHCYESYMLQDTFNVYTYEWN  538 (557)
T ss_pred             CCCeeEccccCc--ccccc-eeEE-ECCEEEEEeeecceeehhhcCccccccc
Confidence            111111111111  11111 2222 2678888998888  6788888766543

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.55  E-value=0.0024  Score=63.81  Aligned_cols=140  Identities=19%  Similarity=0.208  Sum_probs=92.4

Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC-----CceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-----SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      ....++-.|++.++..  .+...+.. +.-..+.|+.+     ..-...|-.++.+..||.+..+...............
T Consensus       502 ~~~~ly~mDLe~GKVV--~eW~~~~~-~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~  578 (794)
T PF08553_consen  502 NPNKLYKMDLERGKVV--EEWKVHDD-IPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN  578 (794)
T ss_pred             CCCceEEEecCCCcEE--EEeecCCC-cceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence            4567888888887543  33333332 22334444322     1134566678889999998754222222233334566


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      ...|++-+.+| +||+|+.+|.|++||-- + ......+++-..+|..+..+.||++|++.+.. .+.+++.
T Consensus       579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~~-g-~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t  646 (794)
T PF08553_consen  579 NFSCFATTEDG-YIAVGSNKGDIRLYDRL-G-KRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT  646 (794)
T ss_pred             CceEEEecCCc-eEEEEeCCCcEEeeccc-c-hhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence            67888888877 69999999999999943 3 23555667778899999999999998876644 5777764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4441|consensus

Probab=97.55  E-value=0.015  Score=57.28  Aligned_cols=233  Identities=16%  Similarity=0.199  Sum_probs=124.8

Q ss_pred             ccCCCEEEEecCCC------cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC------CcEEEEECCCC
Q psy17188        168 LPDGRTLIVGGEAS------NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQ  235 (504)
Q Consensus       168 s~~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~  235 (504)
                      +..+..++.|+.++      .+..||..+++......+..... -.+++.. ++...++|+.|      .++..||..+.
T Consensus       282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~  359 (571)
T KOG4441|consen  282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTN  359 (571)
T ss_pred             CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecCCCC
Confidence            33466777777763      58889988776544444443322 3344444 55778888888      34778888776


Q ss_pred             eEEEe--ecCCCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        236 TLVRQ--FQGHTDGASCIDISADGTKLWTGGLDN-----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       236 ~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      +-...  +..........  .-+|...+.|+.||     ++-.||..+.+....              .....  .....
T Consensus       360 ~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v--------------a~m~~--~r~~~  421 (571)
T KOG4441|consen  360 QWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV--------------APMLT--RRSGH  421 (571)
T ss_pred             ceeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCccccc--------------CCCCc--ceeee
Confidence            63331  11111111111  12577888999886     477888887764211              00000  11122


Q ss_pred             EE-cCCCCEEEEEeCCC------cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC-----eEEEEe
Q psy17188        309 KL-LPDGRTLIVGGEAS------NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-----CVKVWD  376 (504)
Q Consensus       309 ~~-~~~~~~l~~~~~dg------~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~i~i~d  376 (504)
                      +. .-+|...++|+.++      .+..||..+..+.............. ++.. ++.  +++.|+.++     ++..||
T Consensus       422 gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~~-~~~--iYvvGG~~~~~~~~~VE~yd  497 (571)
T KOG4441|consen  422 GVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAVL-NGK--IYVVGGFDGTSALSSVERYD  497 (571)
T ss_pred             EEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEEE-CCE--EEEECCccCCCccceEEEEc
Confidence            22 22677777777554      57889998887766655554433333 2222 222  677777665     366677


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc-----EEEeeCCCCCc
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-----LSIWDLASPTP  429 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~-----i~iwd~~~~~~  429 (504)
                      ..+..-...    ........-..+ ..-+++..++|+.||.     |..||..+.+.
T Consensus       498 p~~~~W~~v----~~m~~~rs~~g~-~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W  550 (571)
T KOG4441|consen  498 PETNQWTMV----APMTSPRSAVGV-VVLGGKLYAVGGFDGNNNLNTVECYDPETDTW  550 (571)
T ss_pred             CCCCceeEc----ccCccccccccE-EEECCEEEEEecccCccccceeEEcCCCCCce
Confidence            655321111    101111111111 1225667777877764     67777665543

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.52  E-value=0.073  Score=48.84  Aligned_cols=110  Identities=21%  Similarity=0.232  Sum_probs=60.4

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeee--eecCCCCceEEEEEccC---CCEEEEecC-C--------C
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQL--DCLQRDNYIRSVKLLPD---GRTLIVGGE-A--------S  181 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~---~~~l~~~~~-d--------g  181 (504)
                      -++|+|.|||+++++-..|.|++++ ..+.....+..+  ...........++++|+   ..+|.+... .        .
T Consensus         4 P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~   82 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDN   82 (331)
T ss_dssp             EEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEE
T ss_pred             ceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcce
Confidence            4789999999999988899999999 333222222222  12245677899999994   334433322 1        2


Q ss_pred             cEEEEeCCCCC------ccceeeeec---CcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        182 NLSIWDLASPT------PRIKAELTS---SAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       182 ~i~iw~~~~~~------~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      .|.-|......      ......+..   ....-..|.|.|||.+.++.+..+.
T Consensus        83 ~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~  136 (331)
T PF07995_consen   83 RVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN  136 (331)
T ss_dssp             EEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred             eeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence            34445544331      111111121   2333567999999976666665443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PHA02713 hypothetical protein; Provisional

Probab=97.52  E-value=0.012  Score=58.06  Aligned_cols=228  Identities=11%  Similarity=0.128  Sum_probs=113.5

Q ss_pred             cEEEEECCCCeEEE--eecCCCCCeEEEEEccCCCEEEEEcCC------CeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        226 NIAVWDLHNQTLVR--QFQGHTDGASCIDISADGTKLWTGGLD------NTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       226 ~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      .+..||..+++...  .+...... .+++. -++..++.|+.+      ..+..||+.++....   ..        ...
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~---~~--------~m~  339 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVE---LP--------PMI  339 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEee---CC--------CCc
Confidence            57788887765332  22211111 12222 256677777754      347778887765321   10        110


Q ss_pred             ecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC---
Q psy17188        298 CLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK---  369 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---  369 (504)
                        ...... +++ .-+++..+.|+.++     .+..||..+.++.....+.........+..  ++.  +++.|+.+   
T Consensus       340 --~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~--IYviGG~~~~~  411 (557)
T PHA02713        340 --KNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQY--IYIIGGRTEHI  411 (557)
T ss_pred             --chhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCE--EEEEeCCCccc
Confidence              011111 122 22567777777654     488899887765544443332222222222  333  55555543   


Q ss_pred             --------------------CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC------CcEEEee
Q psy17188        370 --------------------SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWD  423 (504)
Q Consensus       370 --------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d------g~i~iwd  423 (504)
                                          ..+..||..+..=. ....+   ... .....+..-+++..++|+.+      ..+..||
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~-~v~~m---~~~-r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Yd  486 (557)
T PHA02713        412 DYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWE-TLPNF---WTG-TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYN  486 (557)
T ss_pred             ccccccccccccccccccccceEEEECCCCCeEe-ecCCC---Ccc-cccCcEEEECCEEEEEeCCCCCCccceeEEEec
Confidence                                24667776553211 01111   000 01111222356666777654      2367899


Q ss_pred             CCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCC--cEEEEEcCCcceEEEEeecC
Q psy17188        424 LAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--NIAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       424 ~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~h~  481 (504)
                      ..+ .+......+...........+  ++++.++|+.|+  .+-.||..+.+-...-..|.
T Consensus       487 p~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~  545 (557)
T PHA02713        487 TNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS  545 (557)
T ss_pred             CCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence            887 454444444433333333333  788888999888  67788887766543333343

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.42  E-value=0.097  Score=48.02  Aligned_cols=69  Identities=19%  Similarity=0.159  Sum_probs=41.2

Q ss_pred             CceEEEEEcC-------CCCEEEEeeCCCcEEEeeCCCCCcce-eec-ccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188        396 NYIRSVKLLP-------DGRTLIVGGEASNLSIWDLASPTPRI-KAE-LTSSAPACYALAISPDSKVCFSCCSDGNIA  464 (504)
Q Consensus       396 ~~i~~~~~s~-------~g~~l~~~~~dg~i~iwd~~~~~~~~-~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~  464 (504)
                      ..+..+.|..       +|.+++..-..+.|....++...... ... +......+..+++.|||.+.++-+.+|.|+
T Consensus       253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence            4455666653       44566665556677777776442222 222 233444789999999999988888888774

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=97.42  E-value=0.062  Score=45.71  Aligned_cols=235  Identities=18%  Similarity=0.205  Sum_probs=156.4

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeec
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~  285 (504)
                      -..++-.|||..-+++...+.|--.|..+|+....--+.......+..-|||..-++-+.. -|.-.|.++.++..|.+.
T Consensus        64 p~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp  142 (353)
T COG4257          64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLP  142 (353)
T ss_pred             ccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecc
Confidence            4567888999999999888999999999998877766666677888899998876664443 677788888887766433


Q ss_pred             CCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                                  ............|.+.|++-+++...         +.|++|+...            ......++..|
T Consensus       143 ------------~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq------------G~gpyGi~atp  198 (353)
T COG4257         143 ------------LEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ------------GGGPYGICATP  198 (353)
T ss_pred             ------------cccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCC------------CCCCcceEECC
Confidence                        23344557778899999988887421         2344444332            23667888999


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      ++.  +..+.-.++.|-..|-..... ..+....  .....-..+--+|.|+.-++....+.+.-||..... -....+.
T Consensus       199 dGs--vwyaslagnaiaridp~~~~a-ev~p~P~--~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~eypLP  272 (353)
T COG4257         199 DGS--VWYASLAGNAIARIDPFAGHA-EVVPQPN--ALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEYPLP  272 (353)
T ss_pred             CCc--EEEEeccccceEEcccccCCc-ceecCCC--cccccccccccCccCcEEEeccCCceeeEeCccccc-ceeeeCC
Confidence            998  566655666666666544311 1111111  112223456667788888887777888888876544 3445566


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +....-.++.....++.-.+--..|.|.-+|-++.
T Consensus       273 gs~arpys~rVD~~grVW~sea~agai~rfdpeta  307 (353)
T COG4257         273 GSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETA  307 (353)
T ss_pred             CCCCCcceeeeccCCcEEeeccccCceeecCcccc
Confidence            66666666777777766665555666777776554

>PRK10115 protease 2; Provisional

Probab=97.40  E-value=0.2  Score=51.00  Aligned_cols=247  Identities=10%  Similarity=0.089  Sum_probs=118.1

Q ss_pred             ceEEEEECCCCCEEEEEeC-----CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC------CeEEEEE
Q psy17188        205 ACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD------NTVRSWD  273 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd  273 (504)
                      .+..+.|+||+++|+.+..     ...|++.|+.+++.+...-....  ..++|.+|++.|+....+      ..|+.++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            3667889999998876543     23488999988864322211211  468999998866655432      3577777


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceE-EEEEcCCCCEEEEEeC---CCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR-SVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      +.++.-..             .+.......... .+..+.++++++..+.   ++.+.+++...................
T Consensus       206 lgt~~~~d-------------~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  272 (686)
T PRK10115        206 IGTPASQD-------------ELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHE  272 (686)
T ss_pred             CCCChhHC-------------eEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCE
Confidence            77762100             000111111122 3344557887765543   346888885432212121222222222


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE--EeeCCCC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS--IWDLASP  427 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~--iwd~~~~  427 (504)
                      ..+. . .+...++.+.......++..+..... .....+........+..+.+. .+.++++...+|.-+  +++..+.
T Consensus       273 ~~~~-~-~~~~ly~~tn~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~  348 (686)
T PRK10115        273 YSLD-H-YQHRFYLRSNRHGKNFGLYRTRVRDE-QQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTR  348 (686)
T ss_pred             EEEE-e-CCCEEEEEEcCCCCCceEEEecCCCc-ccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCC
Confidence            2222 2 22333444433223344443332211 111111111123467778887 334556666677644  4454322


Q ss_pred             CcceeecccCCCCceeEEEEC--CCCC-EEEEeeC---CCcEEEEEcCCcc
Q psy17188        428 TPRIKAELTSSAPACYALAIS--PDSK-VCFSCCS---DGNIAVWDLHNQT  472 (504)
Q Consensus       428 ~~~~~~~~~~~~~~v~~l~~s--~~~~-~l~s~~~---dg~i~iwd~~~~~  472 (504)
                      . .....+. ....+..+.++  +++. ++++.+.   -+.++.+|+.+++
T Consensus       349 ~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        349 E-VIGIAFD-DPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             c-eEEecCC-CCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            2 2222221 12223333444  3443 4444332   4678889988765

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.39  E-value=0.082  Score=53.78  Aligned_cols=124  Identities=11%  Similarity=0.164  Sum_probs=70.3

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC--------eEEEEEcc----------------CCCEEEEEcCCCeEE
Q psy17188        215 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG--------ASCIDISA----------------DGTKLWTGGLDNTVR  270 (504)
Q Consensus       215 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~--------v~~~~~~~----------------~~~~l~s~~~dg~i~  270 (504)
                      +..|+.++.++.|.-.|.++|+.+.++......        ...+.+..                .+.+++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            446777778888999999999888887632211        12222221                244788899999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeC----------CCcEEEEeCCCCCccc
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGE----------ASNLSIWDLASPTPRI  338 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~----------dg~i~v~d~~~~~~~~  338 (504)
                      -.|.++|+. +|+....+.......+.  .....-..+.-.|  .+..+++++.          +|.|+-+|.++++...
T Consensus       274 ALDA~TGk~-~W~fg~~G~vdl~~~~g--~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W  350 (764)
T TIGR03074       274 ALDADTGKL-CEDFGNNGTVDLTAGMG--TTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW  350 (764)
T ss_pred             EEECCCCCE-EEEecCCCceeeecccC--cCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence            999999984 34433221110000000  0000000111122  2345666642          6889999999997655


Q ss_pred             eee
Q psy17188        339 KAE  341 (504)
Q Consensus       339 ~~~  341 (504)
                      ...
T Consensus       351 ~~~  353 (764)
T TIGR03074       351 AWD  353 (764)
T ss_pred             EEe
Confidence            544

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.39  E-value=0.022  Score=48.87  Aligned_cols=206  Identities=12%  Similarity=0.114  Sum_probs=114.3

Q ss_pred             cceeeecCCCc--EEEEEEcCCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        105 RQINTLSHGEV--VCAVTISNPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       105 ~~~~~~~h~~~--V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      +.+.+..|+..  ...+.|..++.++-+.+   ...|+.+|+++++...   ...+ ...-.=..++... ++.....=.
T Consensus        34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~---~~~l-~~~~FgEGit~~~-d~l~qLTWk  108 (264)
T PF05096_consen   34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQ---SVPL-PPRYFGEGITILG-DKLYQLTWK  108 (264)
T ss_dssp             EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEE---EEE--TTT--EEEEEEET-TEEEEEESS
T ss_pred             EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEE---EEEC-CccccceeEEEEC-CEEEEEEec
Confidence            44555666443  45677877888877766   4589999999864222   1111 2222223444443 333334446


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEEc
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDIS  254 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~  254 (504)
                      ++...+||..+.+........+   .=+.++  .|++.|+.......++++|.++.+..+.+.-..     ..++.+.|-
T Consensus       109 ~~~~f~yd~~tl~~~~~~~y~~---EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i  183 (264)
T PF05096_consen  109 EGTGFVYDPNTLKKIGTFPYPG---EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI  183 (264)
T ss_dssp             SSEEEEEETTTTEEEEEEE-SS---S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE
T ss_pred             CCeEEEEccccceEEEEEecCC---cceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE
Confidence            8899999998765544444433   335566  467777777777889999998887777665322     245667775


Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEEEe-ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKVWD-ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  322 (504)
                       +|...|-.-....|...|..+|++.-+- +..-...... ........+-.+.++++|..+.|++.+.
T Consensus       184 -~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~-~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  184 -NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGR-DKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             -TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTS-TTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             -cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccc-cccccccCCeeEeEeEeCCCCEEEEEeC
Confidence             6766777777788999999999875431 1100000000 0000112456799999997766655543

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.33  E-value=0.097  Score=45.88  Aligned_cols=147  Identities=18%  Similarity=0.124  Sum_probs=89.1

Q ss_pred             cEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEe-CCCC
Q psy17188        115 VVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD-LASP  191 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~-~~~~  191 (504)
                      .+.+.+++++++.++.-.  ++.-.||-...+.......      ....+..-.|++++...+....+...+++. ..++
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~------~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g   98 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL------TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASG   98 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec------cCCccccccccCCCCEEEEEcCCCceEEEEecCCC
Confidence            678899999998777644  5444444444332222221      223678889999988777766666666664 2333


Q ss_pred             Cccc-eeeeecCcCceEEEEECCCCCEEEEEe---CCCcEEEEECC---CC------eEEEeecCCCCCeEEEEEccCCC
Q psy17188        192 TPRI-KAELTSSAPACYALAISPDSKVCFSCC---SDGNIAVWDLH---NQ------TLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       192 ~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~i~iwd~~---~~------~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      +... ..........|..+.+||||..++...   .++.|.+=-+.   .+      ............+..+.|.+++.
T Consensus        99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~  178 (253)
T PF10647_consen   99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST  178 (253)
T ss_pred             cceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE
Confidence            3221 111121122799999999999777665   34666665443   22      11122223456889999999988


Q ss_pred             EEEEEcCCC
Q psy17188        259 KLWTGGLDN  267 (504)
Q Consensus       259 ~l~s~~~dg  267 (504)
                      +++.+...+
T Consensus       179 L~V~~~~~~  187 (253)
T PF10647_consen  179 LVVLGRSAG  187 (253)
T ss_pred             EEEEeCCCC
Confidence            776665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2079|consensus

Probab=97.31  E-value=0.0043  Score=62.24  Aligned_cols=108  Identities=15%  Similarity=0.291  Sum_probs=80.0

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  243 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  243 (504)
                      .++-.-.+..++.|++.|.+...|+...- .....-..-..+|++++|+.+|..++.|-.+|.|.+||+..++..+.+..
T Consensus        92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL-~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e  170 (1206)
T KOG2079|consen   92 VISSAIVVVPIVIGTSHGHVLLSDMTGNL-GPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE  170 (1206)
T ss_pred             eeeeeeeeeeEEEEcCchhhhhhhhhccc-chhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence            33333356789999999999998886531 11122233457799999999999999999999999999999999998887


Q ss_pred             CCCCeEEEE---EccCCCEEEEEcCCCeEEEEEC
Q psy17188        244 HTDGASCID---ISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       244 h~~~v~~~~---~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      |..+.+++-   +..++..++++...|.  +|.+
T Consensus       171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  171 HGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             cCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            776665554   4446667888877776  4543

>KOG2395|consensus

Probab=97.29  E-value=0.016  Score=53.80  Aligned_cols=149  Identities=19%  Similarity=0.240  Sum_probs=96.3

Q ss_pred             CCCEEEE-EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee-----eeccCCCeEEEEecCCCCCC-Cc
Q psy17188        313 DGRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF-----SSHHYKSCVKVWDISQPGSK-TP  385 (504)
Q Consensus       313 ~~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~i~i~d~~~~~~~-~~  385 (504)
                      +.++|+. +.....++-.|++.++.  ..+...+. .|.-+.+.|+.+...+     +.|-.++.|.-||.+-.... ..
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKI--VeEWk~~~-di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~  420 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKI--VEEWKFED-DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLA  420 (644)
T ss_pred             ccceEeeCCCCcCcceeeeccccee--eeEeeccC-CcceeeccCCcchhcccccccEEeecCCceEEecccccCcceee
Confidence            4444443 44445677788887743  33333333 3777777877664332     34556888999998854431 12


Q ss_pred             ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188        386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  465 (504)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i  465 (504)
                      ..+...........|++-..+| ++++|+.+|.|++||-- + ......+++-..+|..+..+.||++|+..+. ..+.+
T Consensus       421 ~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri-~-~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlL  496 (644)
T KOG2395|consen  421 VVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRI-G-RRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLL  496 (644)
T ss_pred             eeeccccccccccceeeecCCc-eEEEeecCCcEEeehhh-h-hhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEE
Confidence            2222233344556677777666 79999999999999973 2 2445567888889999999999999886654 44555


Q ss_pred             EEc
Q psy17188        466 WDL  468 (504)
Q Consensus       466 wd~  468 (504)
                      .++
T Consensus       497 i~t  499 (644)
T KOG2395|consen  497 IDT  499 (644)
T ss_pred             EEE
Confidence            554

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.24  E-value=0.11  Score=44.86  Aligned_cols=128  Identities=12%  Similarity=0.186  Sum_probs=88.4

Q ss_pred             eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      ..+-...+.++.|+|+.+.|++......-.|+=..+|+.++++.- .-...-.+.+..++.+.++--.++.+.++.+..+
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            344555599999999999999988888888887788999988753 1233456788888888888888999988887765


Q ss_pred             ceEEEeecCCCCCCCcccceeccc-CCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      ...+ .....    .+ .+....+ ......++|+|....|+++-+-.-+.||.+.
T Consensus       161 t~~~-~~~~~----~i-~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         161 TTVI-SAKVQ----KI-PLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             ccEE-eccce----EE-eccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            3111 00000    00 1111112 4557889999999888888777777777655

>smart00320 WD40 WD40 repeats

Probab=97.20  E-value=0.0011  Score=38.04  Aligned_cols=36  Identities=33%  Similarity=0.538  Sum_probs=31.4

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      ...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus         5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345567788899999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.14  E-value=0.14  Score=44.10  Aligned_cols=186  Identities=16%  Similarity=0.159  Sum_probs=112.2

Q ss_pred             CCceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ......+.|..+|.++-+.+.-|  .|+.+|+.+++......++..- --..++...|.   ++...-.++...+||..+
T Consensus        44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~-FgEGit~~~d~---l~qLTWk~~~~f~yd~~t  119 (264)
T PF05096_consen   44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRY-FGEGITILGDK---LYQLTWKEGTGFVYDPNT  119 (264)
T ss_dssp             T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT---EEEEEEETTE---EEEEESSSSEEEEEETTT
T ss_pred             cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccc-cceeEEEECCE---EEEEEecCCeEEEEcccc
Confidence            34566788877888777777766  5899999988655554444321 22334443332   455555788899999875


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCC---ceeEEEECCCCCEEEE
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---ACYALAISPDSKVCFS  456 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~~~~~l~s  456 (504)
                      -+.   ...+..   ...=..++  .|++.|+.......|+++|..+.+............   .++-|.+- +|...|=
T Consensus       120 l~~---~~~~~y---~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyAN  190 (264)
T PF05096_consen  120 LKK---IGTFPY---PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYAN  190 (264)
T ss_dssp             TEE---EEEEE----SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEE
T ss_pred             ceE---EEEEec---CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEE
Confidence            322   222222   22333455  567778887777889999988766555444433333   35567776 6776666


Q ss_pred             eeCCCcEEEEEcCCcceEEEEee------------c---CCceEEEEEccCCCEEEEec
Q psy17188        457 CCSDGNIAVWDLHNQTLVRQFQG------------H---TDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       457 ~~~dg~i~iwd~~~~~~~~~~~~------------h---~~~v~~~~~s~d~~~l~s~s  500 (504)
                      .-....|...|..+|+++..+.-            +   .+-.+.+++.|+.+.|..-|
T Consensus       191 VW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  191 VWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             ETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             eCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            65667789999999999887641            1   24578999988766665544

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.12  E-value=0.15  Score=44.08  Aligned_cols=172  Identities=12%  Similarity=0.074  Sum_probs=108.1

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +....+.++.|+|+.+.|++......-.++=..+++......+.+..+ .-.+.+..++++.++--.++.+.++.+....
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~D-pE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSD-PETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCC-hhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            455669999999999999988877777777666666554555555332 3567888888887777778888888777553


Q ss_pred             EEEee----------cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        237 LVRQF----------QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       237 ~~~~~----------~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      .+..+          ...+...-.++|.|..+.|+.+-+-.-+.++....+.-.. ........    .....-.-..+.
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l-~~~~~~~~----~~~~~~f~~DvS  236 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSL-SVHASLDP----TADRDLFVLDVS  236 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccc-ccccccCc----ccccceEeeccc
Confidence            22211          1125678899999988888888777777777665332000 00000000    000001123467


Q ss_pred             EEEEcC-CCCEEEEEeCCCcEEEEeCCCC
Q psy17188        307 SVKLLP-DGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       307 ~~~~~~-~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      ++.|++ .+..|+.+.+++.+.-.|....
T Consensus       237 gl~~~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         237 GLEFNAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             cceecCCCCcEEEEecCCceEEEEecCCC
Confidence            788887 4556666777777777776543

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.12  E-value=0.24  Score=46.38  Aligned_cols=145  Identities=10%  Similarity=0.073  Sum_probs=86.2

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccc--eeeeecCcCceEEEEECC-----CCCEEEEEeCCCcEEEEECCC--Ce----
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRI--KAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHN--QT----  236 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iwd~~~--~~----  236 (504)
                      +...|++|+..|.++||+........  ...-..-..+|..+..-+     +...||+ -.-..+.||.+..  +.    
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g  114 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHG  114 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence            44689999999999999986544322  111123345677776532     2234444 4567888888731  11    


Q ss_pred             ---EEEeecCCC--CCeEEEEEcc----C-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        237 ---LVRQFQGHT--DGASCIDISA----D-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       237 ---~~~~~~~h~--~~v~~~~~~~----~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                         .+..+..|.  .....+++-|    . ..+|..-+.||.+.+++-+.-....             .+   ...--.-
T Consensus       115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~-------------~l---p~~llPg  178 (418)
T PF14727_consen  115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSR-------------FL---PDFLLPG  178 (418)
T ss_pred             cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEE-------------Ec---CCCCCCc
Confidence               111222222  2233444433    2 3578889999999999977543211             11   1112234


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      .+.|.+....+++++.+..+.-|..
T Consensus       179 Pl~Y~~~tDsfvt~sss~~l~~Yky  203 (418)
T PF14727_consen  179 PLCYCPRTDSFVTASSSWTLECYKY  203 (418)
T ss_pred             CeEEeecCCEEEEecCceeEEEecH
Confidence            5678888888999988888888864

>KOG2079|consensus

Probab=97.08  E-value=0.0036  Score=62.77  Aligned_cols=98  Identities=14%  Similarity=0.275  Sum_probs=75.5

Q ss_pred             CCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce
Q psy17188        405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  484 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v  484 (504)
                      -.+..++.|+..|.+...|.... ............+|++++|+.||+.++.|-.+|.|.+||+..++.++.+..|..+.
T Consensus        97 ~~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~  175 (1206)
T KOG2079|consen   97 IVVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPV  175 (1206)
T ss_pred             eeeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCcc
Confidence            34567899999999999888753 22223334456789999999999999999999999999999999999888777665


Q ss_pred             EEE---EEccCCCEEEEecCCC
Q psy17188        485 SCI---DISADGTKLWTGGLDN  503 (504)
Q Consensus       485 ~~~---~~s~d~~~l~s~s~Dg  503 (504)
                      +.+   .+..++..++++..-|
T Consensus       176 t~vi~v~~t~~nS~llt~D~~G  197 (1206)
T KOG2079|consen  176 TGVIFVGRTSQNSKLLTSDTGG  197 (1206)
T ss_pred             ceEEEEEEeCCCcEEEEccCCC
Confidence            544   4556666777776655

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=97.05  E-value=0.27  Score=45.94  Aligned_cols=143  Identities=15%  Similarity=0.158  Sum_probs=78.8

Q ss_pred             CceEEEEEccCCCEEEEec-----------CCC-cEEEEeCCCC--CccceeeeecCcCceEEEEECCCCCEEEEEeCCC
Q psy17188        160 NYIRSVKLLPDGRTLIVGG-----------EAS-NLSIWDLASP--TPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~-----------~dg-~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      .....|+|.++|+++++-.           ..+ .|.+++-.++  +......+.........+++.+++ +++ ++.. 
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~-   90 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPP-   90 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCC-
Confidence            4466889999999777642           123 6777765432  222223333333446789999888 444 4444 


Q ss_pred             cEEEE-ECCC-------Ce-EEEeecC----CCCCeEEEEEccCCCEEEEEcCC-------------------CeEEEEE
Q psy17188        226 NIAVW-DLHN-------QT-LVRQFQG----HTDGASCIDISADGTKLWTGGLD-------------------NTVRSWD  273 (504)
Q Consensus       226 ~i~iw-d~~~-------~~-~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d-------------------g~i~~wd  273 (504)
                      .|..+ |...       .+ .+..+..    +......+.|.|||.+.++-+..                   |.|..++
T Consensus        91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~  170 (367)
T TIGR02604        91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN  170 (367)
T ss_pred             eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence            34434 4431       11 2222322    23447789999999876655421                   3344444


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      ..+++.+++               . ........++|+++|+++++-.
T Consensus       171 pdg~~~e~~---------------a-~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       171 PDGGKLRVV---------------A-HGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             cCCCeEEEE---------------e-cCcCCCccceECCCCCEEEEcc
Confidence            444433211               1 1223356899999998876644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.02  E-value=0.3  Score=45.79  Aligned_cols=149  Identities=13%  Similarity=0.139  Sum_probs=90.7

Q ss_pred             CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-----CCCEEEEecCCCcEEEEeCCCCCcc---
Q psy17188        124 PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-----DGRTLIVGGEASNLSIWDLASPTPR---  194 (504)
Q Consensus       124 ~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~---  194 (504)
                      +...|++|+ .|.++||+....+.... ..+-...-..+|..+..-.     +...||+ -.-..+.+|.+......   
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~-~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~  113 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPE-DLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEH  113 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCc-cEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCccc
Confidence            345777888 99999999865432221 2222224567788877543     3345555 35678888887322211   


Q ss_pred             ----ceeeeecCc--CceEEEEECC----C-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        195 ----IKAELTSSA--PACYALAISP----D-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       195 ----~~~~~~~~~--~~v~~~~~s~----~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                          .......|.  .....++.-|    . ..++.+-+.||.+.+++-+.-...+.+.. .--...+.+.+.-..|+++
T Consensus       114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~  192 (418)
T PF14727_consen  114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTA  192 (418)
T ss_pred             CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence                111222222  1123333322    2 35888899999999999776555555543 2233456788877789999


Q ss_pred             cCCCeEEEEECC
Q psy17188        264 GLDNTVRSWDLR  275 (504)
Q Consensus       264 ~~dg~i~~wd~~  275 (504)
                      +.+..+..|...
T Consensus       193 sss~~l~~Yky~  204 (418)
T PF14727_consen  193 SSSWTLECYKYQ  204 (418)
T ss_pred             cCceeEEEecHH
Confidence            999999888754

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.98  E-value=0.21  Score=43.17  Aligned_cols=201  Identities=16%  Similarity=0.204  Sum_probs=113.0

Q ss_pred             cCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC--CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE
Q psy17188        203 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK  280 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~  280 (504)
                      ..-+..+.++.+  +...+..+.-++|.|+.+...-..+..  -.+--.++..  .|++...+..|.-+.+.|+.+.+-.
T Consensus        86 ~~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP  161 (370)
T COG5276          86 RDLFADVRVSEE--YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP  161 (370)
T ss_pred             hhhhheeEeccc--EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence            344566777644  777777888899999987643333221  2233344444  4788888886766778887765411


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                      ..            .-........-..++.|  |++..++..|+-+.+.|+.................+.++..+++.. 
T Consensus       162 ~l------------agrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~-  226 (370)
T COG5276         162 QL------------AGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRA-  226 (370)
T ss_pred             ee------------eeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCee-
Confidence            10            11111112222445554  6778888899999999998876544444444444677777777754 


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                       +++..  +.-+.+-|.........+...+. .....++.+..  .+++......+.-+.+-|+.+..
T Consensus       227 -y~vvy--~egvlivd~s~~ssp~~~gsyet-~~p~~~s~v~V--s~~~~Yvadga~gl~~idisnp~  288 (370)
T COG5276         227 -YLVVY--DEGVLIVDVSGPSSPTVFGSYET-SNPVSISTVPV--SGEYAYVADGAKGLPIIDISNPP  288 (370)
T ss_pred             -EEEEc--ccceEEEecCCCCCceEeecccc-CCcccccceec--ccceeeeeccccCceeEeccCCC
Confidence             33332  34455666655433322222111 11112222333  45666666666667777776543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.97  E-value=0.25  Score=44.12  Aligned_cols=280  Identities=14%  Similarity=0.151  Sum_probs=123.9

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceee-eecC---cCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSS---APACYALAISPDSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~  232 (504)
                      +-...+.+|.|..+..-+++|. .+.  |+...++-...... ....   .....++.|..+ ..+++| ..+ +.+...
T Consensus        14 ~t~~~l~dV~F~d~~~G~~VG~-~g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~ivG-~~g-~ll~T~   87 (302)
T PF14870_consen   14 PTDKPLLDVAFVDPNHGWAVGA-YGT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIVG-EPG-LLLHTT   87 (302)
T ss_dssp             S-SS-EEEEEESSSS-EEEEET-TTE--EEEESSTTSS-EE-----S-----EEEEEEEETT-EEEEEE-ETT-EEEEES
T ss_pred             CCCCceEEEEEecCCEEEEEec-CCE--EEEECCCCccccccccCCCccceeeEEEEEecCC-ceEEEc-CCc-eEEEec
Confidence            3456899999996666677765 453  33333322211111 1111   123667777643 344444 444 444444


Q ss_pred             CCCeEEEeec---CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        233 HNQTLVRQFQ---GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       233 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      +.++.-..+.   .-.+....+....++..++. +..|.|+.= .+.|+  .|            ..........+..+.
T Consensus        88 DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~-~~~G~iy~T-~DgG~--tW------------~~~~~~~~gs~~~~~  151 (302)
T PF14870_consen   88 DGGKTWERVPLSSKLPGSPFGITALGDGSAELA-GDRGAIYRT-TDGGK--TW------------QAVVSETSGSINDIT  151 (302)
T ss_dssp             STTSS-EE----TT-SS-EEEEEEEETTEEEEE-ETT--EEEE-SSTTS--SE------------EEEE-S----EEEEE
T ss_pred             CCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEE-cCCCcEEEe-CCCCC--Ce------------eEcccCCcceeEeEE
Confidence            4443322221   12233444444444433333 334443322 12222  11            111123346688888


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      .+++|++++++.......-||--..  ............+..|.|.|++.  +.+ ....+.++.=+.......-.....
T Consensus       152 r~~dG~~vavs~~G~~~~s~~~G~~--~w~~~~r~~~~riq~~gf~~~~~--lw~-~~~Gg~~~~s~~~~~~~~w~~~~~  226 (302)
T PF14870_consen  152 RSSDGRYVAVSSRGNFYSSWDPGQT--TWQPHNRNSSRRIQSMGFSPDGN--LWM-LARGGQIQFSDDPDDGETWSEPII  226 (302)
T ss_dssp             E-TTS-EEEEETTSSEEEEE-TT-S--S-EEEE--SSS-EEEEEE-TTS---EEE-EETTTEEEEEE-TTEEEEE---B-
T ss_pred             ECCCCcEEEEECcccEEEEecCCCc--cceEEccCccceehhceecCCCC--EEE-EeCCcEEEEccCCCCccccccccC
Confidence            9999999998876665667775432  22223333456999999999976  333 337788887762111000000011


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ........+..++|.+++...++|+ .|.+ +...+.++.-.... ...-....+.+.|.++.+-++. +.+|.|.-|
T Consensus       227 ~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l-G~~G~ll~~  301 (302)
T PF14870_consen  227 PIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL-GQDGVLLRY  301 (302)
T ss_dssp             TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             CcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEE-CCCcEEEEe
Confidence            1112334478999999988777665 4543 33444443322222 2233445777888766555554 478876655

>PHA03098 kelch-like protein; Provisional

Probab=96.93  E-value=0.097  Score=51.96  Aligned_cols=151  Identities=15%  Similarity=0.228  Sum_probs=77.6

Q ss_pred             CCCEEEEecCC-----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEE
Q psy17188        170 DGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLV  238 (504)
Q Consensus       170 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~  238 (504)
                      +++..+.|+.+     ..+..||..+.+......+....... +++. -+++..+.|+.+      ..+..||..+++-.
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~  419 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWS  419 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence            67777778765     34778888876654333332221111 1222 256666777632      35888998876543


Q ss_pred             Ee--ecCCCCCeEEEEEccCCCEEEEEcCCC--------eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        239 RQ--FQGHTDGASCIDISADGTKLWTGGLDN--------TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       239 ~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      ..  +...... .++ ...++..++.|+.+.        .+.+||..+++.....           .....  ......+
T Consensus       420 ~~~~~p~~r~~-~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~-----------~~~~~--r~~~~~~  484 (534)
T PHA03098        420 KGSPLPISHYG-GCA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELS-----------SLNFP--RINASLC  484 (534)
T ss_pred             ecCCCCccccC-ceE-EEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCC-----------CCCcc--cccceEE
Confidence            22  1111111 122 223566666666432        3788888887643211           00000  0111122


Q ss_pred             EEcCCCCEEEEEeCC-----CcEEEEeCCCCCccce
Q psy17188        309 KLLPDGRTLIVGGEA-----SNLSIWDLASPTPRIK  339 (504)
Q Consensus       309 ~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~  339 (504)
                      .+  +++.++.|+.+     ..+.+||..+.++...
T Consensus       485 ~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~  518 (534)
T PHA03098        485 IF--NNKIYVVGGDKYEYYINEIEVYDDKTNTWTLF  518 (534)
T ss_pred             EE--CCEEEEEcCCcCCcccceeEEEeCCCCEEEec
Confidence            22  56677777654     4688888887655433

>KOG2395|consensus

Probab=96.93  E-value=0.025  Score=52.53  Aligned_cols=149  Identities=19%  Similarity=0.246  Sum_probs=99.1

Q ss_pred             CCCE-EEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC--E-----EEEEcCCCeEEEEECCCCceEEEeec
Q psy17188        214 DSKV-CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT--K-----LWTGGLDNTVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       214 ~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~-----l~s~~~dg~i~~wd~~~~~~~~~~~~  285 (504)
                      +.++ |.++.....++-.|++.|+.+...+-+.. |.-+.+.|+.+  .     -+.|-.|..|.-||++-........ 
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~-  421 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV-  421 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee-
Confidence            4443 34455566788899999999999987666 77778888643  2     2346668889999988432211000 


Q ss_pred             CCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                              .+...........|++-..+| ++++|+.+|.|++||--..  .....+++-..+|..+..+.+|++ ++++
T Consensus       422 --------~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~--~AKTAlPgLG~~I~hVdvtadGKw-il~T  489 (644)
T KOG2395|consen  422 --------VQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGR--RAKTALPGLGDAIKHVDVTADGKW-ILAT  489 (644)
T ss_pred             --------eeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhh--hhhhcccccCCceeeEEeeccCcE-EEEe
Confidence                    012222334445666666665 6999999999999997322  455667778889999999999994 3333


Q ss_pred             ccCCCeEEEEecC
Q psy17188        366 HHYKSCVKVWDIS  378 (504)
Q Consensus       366 ~~~~~~i~i~d~~  378 (504)
                        .+..+.+.++.
T Consensus       490 --c~tyLlLi~t~  500 (644)
T KOG2395|consen  490 --CKTYLLLIDTL  500 (644)
T ss_pred             --cccEEEEEEEe
Confidence              35666666653

>PHA03098 kelch-like protein; Provisional

Probab=96.92  E-value=0.07  Score=52.94  Aligned_cols=107  Identities=11%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             cCCCEEEEecCCC------cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy17188        169 PDGRTLIVGGEAS------NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTL  237 (504)
Q Consensus       169 ~~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~  237 (504)
                      .++..++.|+.++      .+..||..+.+......+.........+.+  +++..+.|+.+     ..+..||..+++-
T Consensus       293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W  370 (534)
T PHA03098        293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKW  370 (534)
T ss_pred             ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence            3566667776432      577888877665333222222222222222  66677777765     3477888877643


Q ss_pred             EEe--ecCCCCCeEEEEEccCCCEEEEEcCC------CeEEEEECCCCce
Q psy17188        238 VRQ--FQGHTDGASCIDISADGTKLWTGGLD------NTVRSWDLREGCV  279 (504)
Q Consensus       238 ~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~  279 (504)
                      ...  +...... .+++ .-+++..+.|+.+      ..+..||+.+++.
T Consensus       371 ~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W  418 (534)
T PHA03098        371 REEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKW  418 (534)
T ss_pred             eeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence            321  1111111 1122 2256666777632      3578888887764

>KOG2377|consensus

Probab=96.86  E-value=0.37  Score=44.35  Aligned_cols=156  Identities=13%  Similarity=0.239  Sum_probs=99.8

Q ss_pred             EEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc--e
Q psy17188        119 VTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--K  196 (504)
Q Consensus       119 v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~  196 (504)
                      +-|...++.|.+...|.+.=|-+...+...++..  ....++.|.++.||+|.+.||+--.+.+|.+++....+...  .
T Consensus        28 vFfDDaNkqlfavrSggatgvvvkgpndDVpiSf--dm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~  105 (657)
T KOG2377|consen   28 VFFDDANKQLFAVRSGGATGVVVKGPNDDVPISF--DMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT  105 (657)
T ss_pred             eeeccCcceEEEEecCCeeEEEEeCCCCCCCcee--eecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence            4455555666655556666677665543333322  22467799999999999999999999999999985444322  2


Q ss_pred             eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeecCCCCCeEEEEEccCCCEEEEEc--CCCeEEEEE
Q psy17188        197 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNTVRSWD  273 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~~wd  273 (504)
                      .+.+.....|....|+.+ .-++.....| +-+|-... .+.++..+.|...|.-..|.++.+.++-++  ..+++.=+-
T Consensus       106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~  183 (657)
T KOG2377|consen  106 QECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFH  183 (657)
T ss_pred             HHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEE
Confidence            333444556888999866 4556555444 66665543 344566677888999999999877544333  344444444


Q ss_pred             CCCCc
Q psy17188        274 LREGC  278 (504)
Q Consensus       274 ~~~~~  278 (504)
                      ++++.
T Consensus       184 ~~~~~  188 (657)
T KOG2377|consen  184 FRAGT  188 (657)
T ss_pred             Eeece
Confidence            55443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.86  E-value=0.28  Score=42.99  Aligned_cols=154  Identities=14%  Similarity=0.086  Sum_probs=91.5

Q ss_pred             CeEEEEEccCCCEEEEEc---CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        247 GASCIDISADGTKLWTGG---LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      .+.+.+++++++.++...   ....++++.......                  .......+..-.|++++...++...+
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~------------------~~~~g~~l~~PS~d~~g~~W~v~~~~   86 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVR------------------PVLTGGSLTRPSWDPDGWVWTVDDGS   86 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcce------------------eeccCCccccccccCCCCEEEEEcCC
Confidence            688999999999877665   334566665443321                  11123367778899998777776666


Q ss_pred             CcEEEEe-CCCCCccce-eeeccCCCceeeEEECCCCCCceeeec-cCCCeEEEEecCCCCCC--Ccc-cccccc-cCCC
Q psy17188        324 SNLSIWD-LASPTPRIK-AELTSSAPACYALAISPDSKSPFFSSH-HYKSCVKVWDISQPGSK--TPV-SQLDCL-QRDN  396 (504)
Q Consensus       324 g~i~v~d-~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~i~i~d~~~~~~~--~~~-~~~~~~-~~~~  396 (504)
                      ....++. ...+..... .........|..+.++|||.+..++.. ..++.+.+--+......  ..+ ...... ....
T Consensus        87 ~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~  166 (253)
T PF10647_consen   87 GGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLS  166 (253)
T ss_pred             CceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccC
Confidence            6666663 233222211 111211228999999999998666652 33466777665433222  111 111111 2245


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCc
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASN  418 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~  418 (504)
                      .+..+.|.+++.+++.+...+.
T Consensus       167 ~v~~v~W~~~~~L~V~~~~~~~  188 (253)
T PF10647_consen  167 DVTDVAWSDDSTLVVLGRSAGG  188 (253)
T ss_pred             cceeeeecCCCEEEEEeCCCCC
Confidence            7889999999988777765544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.84  E-value=0.0061  Score=36.77  Aligned_cols=32  Identities=13%  Similarity=0.266  Sum_probs=28.8

Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ....|..++|+|...+||.++.+|.|.+|+++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            34568899999999999999999999999983

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=96.82  E-value=0.3  Score=42.67  Aligned_cols=235  Identities=15%  Similarity=0.162  Sum_probs=131.7

Q ss_pred             CeEEEEEccCCCEEEEEcCCCeEEEEECCC------CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC------
Q psy17188        247 GASCIDISADGTKLWTGGLDNTVRSWDLRE------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG------  314 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------  314 (504)
                      .-+.|+++|.+.+-++....+...+||...      .+..+..+..+..         .......+.+.|+...      
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~---------~~~~~~PTGiVfN~~~~F~vt~   94 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPP---------LAAEGTPTGQVFNGSDTFVVSG   94 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCC---------CCCCCCccEEEEeCCCceEEcC
Confidence            457899999887777777778899999861      1111222221110         0112234555554322      


Q ss_pred             ------CEEEEEeCCCcEEEEeCCCCCc---cceeeecc--CCCceeeEEECCCC-CCceeeeccCCCeEEEEecCCCCC
Q psy17188        315 ------RTLIVGGEASNLSIWDLASPTP---RIKAELTS--SAPACYALAISPDS-KSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       315 ------~~l~~~~~dg~i~v~d~~~~~~---~~~~~~~~--~~~~i~~~~~~~~~-~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                            ..++.+++||+|.-|...-...   .....+..  .......+++...+ ...++++--..++|.+||-.-...
T Consensus        95 ~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~  174 (336)
T TIGR03118        95 EGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPP  174 (336)
T ss_pred             CCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccc
Confidence                  2367788999999998543322   11122221  12234456665432 233667777889999998654321


Q ss_pred             CCc--ccccc-----------cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC
Q psy17188        383 KTP--VSQLD-----------CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP  449 (504)
Q Consensus       383 ~~~--~~~~~-----------~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  449 (504)
                      ...  .....           .....-.|+-..-.++++.=+.|..-|.|-+||.. +..+......+.-..-+.|+..|
T Consensus       175 ~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~AP  253 (336)
T TIGR03118       175 PLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAP  253 (336)
T ss_pred             cCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeCh
Confidence            100  00000           00011112222222333322334445679999987 34444454555555667778766


Q ss_pred             ------CCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC------ceEEEEEcc
Q psy17188        450 ------DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD------GASCIDISA  491 (504)
Q Consensus       450 ------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~~~~s~  491 (504)
                            .+.+|+---.||+|..||..+++.+..+....+      ..+.|.|..
T Consensus       254 a~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       254 ESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             hhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence                  466777666799999999999998888775433      468888865

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PRK10115 protease 2; Provisional

Probab=96.82  E-value=0.72  Score=47.04  Aligned_cols=112  Identities=8%  Similarity=0.055  Sum_probs=67.7

Q ss_pred             CcEEEEEEcCCCcEEEEecC------CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC------C
Q psy17188        114 EVVCAVTISNPTKYVYTGGK------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------S  181 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g  181 (504)
                      -.+..+.+|||+++|+.+.|      ..|++-|+.++.....  .+   ....  ..++|++|++.|+....+      .
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~--~i---~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~  199 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPE--LL---DNVE--PSFVWANDSWTFYYVRKHPVTLLPY  199 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCc--cc---cCcc--eEEEEeeCCCEEEEEEecCCCCCCC
Confidence            34677889999999987652      3588899887532111  11   1111  469999999877776432      3


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceE-EEEECCCCCEEEEEeC---CCcEEEEEC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCS---DGNIAVWDL  232 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~---dg~i~iwd~  232 (504)
                      .|+.+++.++.......+........ ....+.++++++..+.   ++.+.+++.
T Consensus       200 ~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~  254 (686)
T PRK10115        200 QVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA  254 (686)
T ss_pred             EEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence            58888888763322333333222233 3334547776665443   456888884

>KOG2280|consensus

Probab=96.81  E-value=0.33  Score=47.59  Aligned_cols=205  Identities=10%  Similarity=0.115  Sum_probs=104.3

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      -.|+|+++ +|+.+..+.-..+.+..+.|+.+. .|++...||++++|++-......+.+            ........
T Consensus        64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~sv------------g~e~~~~~  129 (829)
T KOG2280|consen   64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSV------------GFESQMSD  129 (829)
T ss_pred             eeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhhhccccc------------ccccccCc
Confidence            45888885 466666655445588899999765 67778899999999987654321111            00111223


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEE-eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC-CCeEEEEecCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIW-DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-KSCVKVWDISQPGS  382 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~-d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~~~  382 (504)
                      |..+.+..+|-.++  ..+|.+.+- +............+.......+....++.....+...-. .-...++....   
T Consensus       130 I~ec~~f~~GVavl--t~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~---  204 (829)
T KOG2280|consen  130 IVECRFFHNGVAVL--TVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEE---  204 (829)
T ss_pred             eeEEEEecCceEEE--ecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceec---
Confidence            44444444553333  344544433 333222111122222222223333333322111111100 00001111111   


Q ss_pred             CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                       ..............+..+..||+.++|+.=...|.|.+-+.+..+..+......+..+- .++|.-+
T Consensus       205 -~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~-qm~Wcgn  270 (829)
T KOG2280|consen  205 -SRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPK-QMAWCGN  270 (829)
T ss_pred             -ccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchH-hceeecC
Confidence             01111111122456789999999999999999999999988766666555544444332 4556543

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.80  E-value=0.0064  Score=36.67  Aligned_cols=33  Identities=12%  Similarity=0.265  Sum_probs=29.5

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .....|.+++|+|..++||.+..+|.|.++.++
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            345679999999999999999999999999984

>KOG1898|consensus

Probab=96.78  E-value=0.78  Score=46.95  Aligned_cols=102  Identities=11%  Similarity=0.117  Sum_probs=61.5

Q ss_pred             CCCcccCCCCCCcccCCCCCccccceee---ecCCCcEEEEEEcCCC------cEEEEec-CCeEEEEeCCCCCCCCcee
Q psy17188         82 DGQMQPVPFPPDALIGPGIPRHARQINT---LSHGEVVCAVTISNPT------KYVYTGG-KGCVKVWDISQPGSKTPVS  151 (504)
Q Consensus        82 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~V~~v~~s~~~------~~l~~~~-d~~i~vw~~~~~~~~~~~~  151 (504)
                      +...+.+++++..++-.......+....   ..-+..|.|+++.++.      ++++.++ |+.+++..+....   .+.
T Consensus       548 nr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d---~l~  624 (1205)
T KOG1898|consen  548 NRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSD---CLQ  624 (1205)
T ss_pred             cceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcc---eEE
Confidence            4456667777766655444433333222   2346789999998764      6888888 9999999987533   333


Q ss_pred             eeeecCCCCceEEEEEcc---CC------CEEEEecCCCcEEEE
Q psy17188        152 QLDCLQRDNYIRSVKLLP---DG------RTLIVGGEASNLSIW  186 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~---~~------~~l~~~~~dg~i~iw  186 (504)
                      .+...+-...+.++.+-+   ++      -+|.+|-.+|.+.-.
T Consensus       625 ~ls~q~l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~  668 (1205)
T KOG1898|consen  625 PLSVQGLSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRF  668 (1205)
T ss_pred             EccccccCCCccceEEEEecccCCccceeEEEEecccccEEEEE
Confidence            333334445555555543   33      256667677765544

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.76  E-value=0.55  Score=44.90  Aligned_cols=124  Identities=15%  Similarity=0.203  Sum_probs=79.9

Q ss_pred             ecCCCcEEEEEEcCC----C-cEEEEecCCeEEEEeCCCC--CCCCceeeeee-cCCCC--ceEEEEEccCCCEEEEecC
Q psy17188        110 LSHGEVVCAVTISNP----T-KYVYTGGKGCVKVWDISQP--GSKTPVSQLDC-LQRDN--YIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~----~-~~l~~~~d~~i~vw~~~~~--~~~~~~~~~~~-~~~~~--~v~~~~~s~~~~~l~~~~~  179 (504)
                      +|.-+-|..+.|.|-    . .+||.-....|.||.+...  +..+.+....+ ....-  --..+.|+|....|++-..
T Consensus        53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~  132 (671)
T PF15390_consen   53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA  132 (671)
T ss_pred             eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence            455567899999984    2 5777777999999998632  22222221111 11111  1235789999998887766


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-CcEEEEECCC
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVWDLHN  234 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iwd~~~  234 (504)
                      ...-.++++.....+.+..++ ..+.|.|.+|.+||+.|+++-.. =.-++||-..
T Consensus       133 ~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  133 RDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             CceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            555566777665555555553 45669999999999977766433 3467888543

>KOG4499|consensus

Probab=96.62  E-value=0.27  Score=40.96  Aligned_cols=135  Identities=16%  Similarity=0.125  Sum_probs=79.2

Q ss_pred             CCceEEEEEccCCCEEEEecC---------CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEE-EeCCCcEE
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGE---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-CCSDGNIA  228 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~  228 (504)
                      +...+.-..+|+|++.+-.-.         .|.++.|-... +.   ......-.--+.++|+.+.+.+.. -+.+-+|.
T Consensus       108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h-~v---~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~  183 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH-QV---ELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVD  183 (310)
T ss_pred             hcccccCccCCCCceeeeeeccccccccccccEEEEeccCC-Cc---eeeehhccCCccccccccCcEEEEEccCceEEe
Confidence            566777788999998443211         23455554332 11   111111222356889887775554 45566777


Q ss_pred             EEE--CCCC-----eEEEeecC----CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        229 VWD--LHNQ-----TLVRQFQG----HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       229 iwd--~~~~-----~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      -||  ..+|     +.+..++.    ..-..-.+++..+|++.++.-..++|...|+.+|++.               ..
T Consensus       184 a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L---------------~e  248 (310)
T KOG4499|consen  184 AYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKIL---------------LE  248 (310)
T ss_pred             eeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEE---------------EE
Confidence            787  5554     23333332    1112234566668888888888899999999999852               22


Q ss_pred             ecccCCceEEEEEcC
Q psy17188        298 CLQRDNYIRSVKLLP  312 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~  312 (504)
                      ..-....+++++|--
T Consensus       249 iklPt~qitsccFgG  263 (310)
T KOG4499|consen  249 IKLPTPQITSCCFGG  263 (310)
T ss_pred             EEcCCCceEEEEecC
Confidence            233356688888864

>PHA02790 Kelch-like protein; Provisional

Probab=96.57  E-value=0.24  Score=48.17  Aligned_cols=152  Identities=12%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             CCCEEEEecCCC-----cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC--CcEEEEECCCCeEEE--e
Q psy17188        170 DGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--GNIAVWDLHNQTLVR--Q  240 (504)
Q Consensus       170 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~iwd~~~~~~~~--~  240 (504)
                      ++..+++|+.++     .+..||..+++......+.........+.  -++...+.|+.+  ..+..||..+++-..  .
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~  348 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS  348 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence            455667776542     47778887665433333322222222222  367677777753  357888877654332  2


Q ss_pred             ecCCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        241 FQGHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      +....... ++ ..-+|+..+.|+.++   .+..||.++++..   ...+.        ..  ..... +++ .-+++..
T Consensus       349 l~~~r~~~-~~-~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~---~~~~m--------~~--~r~~~-~~~-~~~~~IY  411 (480)
T PHA02790        349 LLKPRCNP-AV-ASINNVIYVIGGHSETDTTTEYLLPNHDQWQ---FGPST--------YY--PHYKS-CAL-VFGRRLF  411 (480)
T ss_pred             CCCCCccc-EE-EEECCEEEEecCcCCCCccEEEEeCCCCEEE---eCCCC--------CC--ccccc-eEE-EECCEEE
Confidence            22111111 12 222576777777654   4678888876542   21110        00  00111 121 2345555


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.|   |...+||.++.++.....+.
T Consensus       412 v~G---G~~e~ydp~~~~W~~~~~m~  434 (480)
T PHA02790        412 LVG---RNAEFYCESSNTWTLIDDPI  434 (480)
T ss_pred             EEC---CceEEecCCCCcEeEcCCCC
Confidence            555   45788998887665544443

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=96.50  E-value=0.46  Score=40.70  Aligned_cols=241  Identities=14%  Similarity=0.129  Sum_probs=141.2

Q ss_pred             cCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCcccc-ceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCC
Q psy17188         65 LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHAR-QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQ  143 (504)
Q Consensus        65 ~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~  143 (504)
                      ....+.+...+.++..+||.+--.+. ....+....|..++ ...-++....-..|..-|||..-++-+..-|.-.|-++
T Consensus        55 ~fpvp~G~ap~dvapapdG~VWft~q-g~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt  133 (353)
T COG4257          55 EFPVPNGSAPFDVAPAPDGAVWFTAQ-GTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKT  133 (353)
T ss_pred             eeccCCCCCccccccCCCCceEEecC-ccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcceeEEecCcc
Confidence            33445566788888888884332222 22233333344433 33344666667778888888776665533565566555


Q ss_pred             CCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---------CCcEEEEeCCCCCccceeeeecCcCceEEEEECCC
Q psy17188        144 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  214 (504)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~  214 (504)
                      .+...  ..+.............|.+.|++-+++..         .+.|++|+...            ...-+.|+..||
T Consensus       134 ~evt~--f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq------------G~gpyGi~atpd  199 (353)
T COG4257         134 LEVTR--FPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ------------GGGPYGICATPD  199 (353)
T ss_pred             cceEE--eecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCC------------CCCCcceEECCC
Confidence            43211  22222234567888999999998888752         12344554331            122467889999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188        215 SKVCFSCCSDGNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP  292 (504)
Q Consensus       215 ~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~  292 (504)
                      |..-++.-.+..|-..|..++.....  -......-..+--+|.++.-++-...+.+..+|........|.+.       
T Consensus       200 Gsvwyaslagnaiaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLP-------  272 (353)
T COG4257         200 GSVWYASLAGNAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLP-------  272 (353)
T ss_pred             CcEEEEeccccceEEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCC-------
Confidence            99888877778888888776632111  112123344555567787777777778888888877665544332       


Q ss_pred             cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                             .......++.....++.-++--..|.|.-+|-++.
T Consensus       273 -------gs~arpys~rVD~~grVW~sea~agai~rfdpeta  307 (353)
T COG4257         273 -------GSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETA  307 (353)
T ss_pred             -------CCCCCcceeeeccCCcEEeeccccCceeecCcccc
Confidence                   22333445556655655444445566777776654

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=96.49  E-value=0.26  Score=46.15  Aligned_cols=154  Identities=11%  Similarity=-0.010  Sum_probs=87.6

Q ss_pred             ceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC--cee
Q psy17188         74 AYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT--PVS  151 (504)
Q Consensus        74 v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~--~~~  151 (504)
                      .+.+..++||...+++.....+.-++.....=+.....-...++++.+.+++.+++++.+|.+. |..+.+....  .+.
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~-~S~d~G~~~~~~~f~  319 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLY-VSKGTGLTEEDFDFE  319 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEE-EecCCCCccccccee
Confidence            4555667777777777666433322211111022333445678999999999999998877754 4444432111  222


Q ss_pred             eeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        152 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      ..........+.++.|.+++..+++| ..|.+....-.............-....+.+.|.++++.+++| .+|.|.-|
T Consensus       320 ~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        320 EADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             ecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence            22211122458999999888876666 5676666543322222211112234557899998776655554 67776554

>PRK13684 Ycf48-like protein; Provisional

Probab=96.43  E-value=0.74  Score=42.33  Aligned_cols=277  Identities=13%  Similarity=0.134  Sum_probs=129.1

Q ss_pred             CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ...+.+|+|..+.+-++++.++.|  |....++..-.............+.++.|.++ ..+++| ..+.|  |...++.
T Consensus        45 ~~~l~~v~F~d~~~g~avG~~G~i--l~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~G-~~g~i--~~S~DgG  118 (334)
T PRK13684         45 EANLLDIAFTDPNHGWLVGSNRTL--LETNDGGETWEERSLDLPEENFRLISISFKGD-EGWIVG-QPSLL--LHTTDGG  118 (334)
T ss_pred             CCceEEEEEeCCCcEEEEECCCEE--EEEcCCCCCceECccCCcccccceeeeEEcCC-cEEEeC-CCceE--EEECCCC
Confidence            457888999877777777776644  43333222111111111012344778888754 344444 44543  3333221


Q ss_pred             ccceee-----eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        193 PRIKAE-----LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       193 ~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ......     ..++.  ....+..+ +..++ ++..|.|..= .+.|+.-..+ ..-...+.++.+.+++.+++++ ..
T Consensus       119 ~tW~~~~~~~~~~~~~--~~i~~~~~-~~~~~-~g~~G~i~~S-~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g-~~  192 (334)
T PRK13684        119 KNWTRIPLSEKLPGSP--YLITALGP-GTAEM-ATNVGAIYRT-TDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVS-SR  192 (334)
T ss_pred             CCCeEccCCcCCCCCc--eEEEEECC-Cccee-eeccceEEEE-CCCCCCceeCcCCCcceEEEEEECCCCeEEEEe-CC
Confidence            111111     11221  11222222 22333 3344433222 1223222222 2234578899999988665554 45


Q ss_pred             CeEEE-EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-ccceeee-c
Q psy17188        267 NTVRS-WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAEL-T  343 (504)
Q Consensus       267 g~i~~-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~-~  343 (504)
                      |.+.. +|- .++  .|.           . ........+.++.+.++++.++++ ..|.+.+=....+. ....... .
T Consensus       193 G~i~~s~~~-gg~--tW~-----------~-~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~  256 (334)
T PRK13684        193 GNFYSTWEP-GQT--AWT-----------P-HQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEI  256 (334)
T ss_pred             ceEEEEcCC-CCC--eEE-----------E-eeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCcc
Confidence            55443 221 111  111           1 112334568889999999877765 55765432222221 1111110 1


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .....+..+.+.+++.  +++.+ .+|.+.. ....+..-.......  ........+.|..+++.+++ +..|.|..|+
T Consensus       257 ~~~~~l~~v~~~~~~~--~~~~G-~~G~v~~-S~d~G~tW~~~~~~~--~~~~~~~~~~~~~~~~~~~~-G~~G~il~~~  329 (334)
T PRK13684        257 TNGYGYLDLAYRTPGE--IWAGG-GNGTLLV-SKDGGKTWEKDPVGE--EVPSNFYKIVFLDPEKGFVL-GQRGVLLRYV  329 (334)
T ss_pred             ccccceeeEEEcCCCC--EEEEc-CCCeEEE-eCCCCCCCeECCcCC--CCCcceEEEEEeCCCceEEE-CCCceEEEec
Confidence            1223567788888765  45544 4554442 233222211111000  11235667887777766655 4678777765


Q ss_pred             C
Q psy17188        424 L  424 (504)
Q Consensus       424 ~  424 (504)
                      -
T Consensus       330 ~  330 (334)
T PRK13684        330 G  330 (334)
T ss_pred             C
Confidence            3

>KOG3630|consensus

Probab=96.33  E-value=0.098  Score=53.45  Aligned_cols=150  Identities=10%  Similarity=0.023  Sum_probs=91.1

Q ss_pred             CCceEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCccc---eee------eccCCCceeeEEECCCCCCceeeeccCCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRI---KAE------LTSSAPACYALAISPDSKSPFFSSHHYKS  370 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~---~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  370 (504)
                      ...+..+...+|++..++..  .+-.|..||+++.....   ...      .........++.|.|.-.. ..+....|+
T Consensus       100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~-n~av~l~dl  178 (1405)
T KOG3630|consen  100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPL-NSAVDLSDL  178 (1405)
T ss_pred             cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccc-hhhhhcccc
Confidence            34456666777776655543  33378999987643222   111      1122234456777776553 456667788


Q ss_pred             eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-CCCCceeEEEECC
Q psy17188        371 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISP  449 (504)
Q Consensus       371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~  449 (504)
                      .|++..+......     .....-....++++|+|.|+.+++|...|++.-|...-.....+.... .....|.+++|-.
T Consensus       179 sl~V~~~~~~~~~-----v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~  253 (1405)
T KOG3630|consen  179 SLRVKSTKQLAQN-----VTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLS  253 (1405)
T ss_pred             chhhhhhhhhhhh-----hcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEec
Confidence            8888776542211     111233556789999999999999999999988876532111111111 1246789999988


Q ss_pred             CCCEEEEe
Q psy17188        450 DSKVCFSC  457 (504)
Q Consensus       450 ~~~~l~s~  457 (504)
                      ...+|++-
T Consensus       254 t~eflvvy  261 (1405)
T KOG3630|consen  254 TQEFLVVY  261 (1405)
T ss_pred             ceeEEEEe
Confidence            77776643

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.32  E-value=0.19  Score=49.41  Aligned_cols=111  Identities=17%  Similarity=0.177  Sum_probs=72.4

Q ss_pred             eEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECCC-----
Q psy17188        162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLHN-----  234 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~~-----  234 (504)
                      ..-+.-+.-++.-++-+...++.|||...+.......+ ...+.|.++.|.  |+++.+++.+..+.|.++.-..     
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            34444444455445545566799999987764444444 446679999985  5888888888899999985421     


Q ss_pred             ----CeEEEee--cCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        235 ----QTLVRQF--QGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       235 ----~~~~~~~--~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                          ...++.+  ..|+ .+|.+..|.++|..++.+  ++.+.++|-.
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~  156 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW  156 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence                1222222  3344 678999999999655544  3578887643

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.28  E-value=1  Score=42.28  Aligned_cols=93  Identities=17%  Similarity=0.275  Sum_probs=55.5

Q ss_pred             EEEEEcCCCcEEEEec-CCeEEE---EeCCCCC-CCCce--eeeeecCCC--CceEEEEEcc-----------CCCEEEE
Q psy17188        117 CAVTISNPTKYVYTGG-KGCVKV---WDISQPG-SKTPV--SQLDCLQRD--NYIRSVKLLP-----------DGRTLIV  176 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~-d~~i~v---w~~~~~~-~~~~~--~~~~~~~~~--~~v~~~~~s~-----------~~~~l~~  176 (504)
                      +.++.+|++++|+.+. +..+.+   |+.+... .....  .......++  ..|+++.+-|           |...+++
T Consensus         5 ~~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V   84 (415)
T PF14655_consen    5 CSISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV   84 (415)
T ss_pred             ceEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence            4678899999999887 444333   5432211 11111  111111222  5788777754           3578999


Q ss_pred             ecCCCcEEEEeCCCCCccceeeeecCcCceEEEEEC
Q psy17188        177 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  212 (504)
Q Consensus       177 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (504)
                      |..+|.|++|... +.  ......-|..+|..+.+.
T Consensus        85 G~ssG~vrfyte~-G~--LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   85 GTSSGYVRFYTEN-GV--LLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             EecccEEEEEecc-ch--HHHHHhcCccceEEEEec
Confidence            9999999999864 22  233334467777777663

>KOG2444|consensus

Probab=96.26  E-value=0.033  Score=45.99  Aligned_cols=96  Identities=11%  Similarity=0.161  Sum_probs=63.9

Q ss_pred             CCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecC-CceE
Q psy17188        407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGAS  485 (504)
Q Consensus       407 g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~  485 (504)
                      +..+++|+.+|.|++|....................+.+.-..++.+..+++.||.||.|+++-.+.+.....|. .++.
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e  149 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE  149 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence            457999999999999987632111111111111122223333456688899999999999999999888877777 5666


Q ss_pred             EEEEccCCCEEEEe--cCC
Q psy17188        486 CIDISADGTKLWTG--GLD  502 (504)
Q Consensus       486 ~~~~s~d~~~l~s~--s~D  502 (504)
                      .+..+..++.|+.+  |.|
T Consensus       150 ~~ivv~sd~~i~~a~~S~d  168 (238)
T KOG2444|consen  150 ELIVVGSDEFLKIADTSHD  168 (238)
T ss_pred             eeEEecCCceEEeeccccc
Confidence            66666667777776  544

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=96.20  E-value=0.04  Score=50.27  Aligned_cols=161  Identities=17%  Similarity=0.210  Sum_probs=97.3

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC----ceE-EEEECCCCCEEEEEeCCCcEEEE-E
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP----ACY-ALAISPDSKVCFSCCSDGNIAVW-D  231 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~v~-~~~~s~~~~~l~~~~~dg~i~iw-d  231 (504)
                      ....|..+-..|||+.|..-+. .++.++++.+.............+    .|+ .+..-..|.-|.+++.||-|.-| |
T Consensus       219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd  297 (733)
T COG4590         219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD  297 (733)
T ss_pred             CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence            4566788889999999887754 789999988654333322222111    122 12223356678888899998877 4


Q ss_pred             CCCC-----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        232 LHNQ-----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       232 ~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      .+.+     ..++.++-...++..+.-..+.+-+++-+..|++.++.....+.                +.....-..+.
T Consensus       298 vr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~----------------lL~~~~~~~~~  361 (733)
T COG4590         298 VRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKL----------------LLFERAYQAPQ  361 (733)
T ss_pred             eecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcc----------------eehhhhhcCcc
Confidence            4432     22333332333444433333344677777888887776554442                11122223566


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      -+++||++.++++- +.|.++++.+++..+
T Consensus       362 ~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         362 LVAMSPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             eeeeCcccchheee-cCCceEEEEecCCCC
Confidence            78999999988875 457899998887654

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.16  E-value=1.2  Score=41.81  Aligned_cols=144  Identities=10%  Similarity=0.147  Sum_probs=79.6

Q ss_pred             cEEEEEEcCCCcEEEEec------------CC-eEEEEeCCCCC-CCCceeeeeecCCCCceEEEEEccCCCEEEEecCC
Q psy17188        115 VVCAVTISNPTKYVYTGG------------KG-CVKVWDISQPG-SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  180 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~------------d~-~i~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  180 (504)
                      ...+|+|.++|+++++..            .+ .|.+++-..+. .......+.  ..-.....+++.+++ .++ +...
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa--~~l~~p~Gi~~~~~G-lyV-~~~~   90 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA--EELSMVTGLAVAVGG-VYV-ATPP   90 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee--cCCCCccceeEecCC-EEE-eCCC
Confidence            346789999999888752            22 67777643322 111122221  233456889999888 444 4443


Q ss_pred             CcEEEE-eCCCC-----Cccce-eeeec----CcCceEEEEECCCCCEEEEEeCC-------------------CcEEEE
Q psy17188        181 SNLSIW-DLASP-----TPRIK-AELTS----SAPACYALAISPDSKVCFSCCSD-------------------GNIAVW  230 (504)
Q Consensus       181 g~i~iw-~~~~~-----~~~~~-~~~~~----~~~~v~~~~~s~~~~~l~~~~~d-------------------g~i~iw  230 (504)
                       .|..+ +.+..     +.+.. ..+..    +......++|.|||.+.++-+..                   |.|.-+
T Consensus        91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~  169 (367)
T TIGR02604        91 -DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRY  169 (367)
T ss_pred             -eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEE
Confidence             45444 44321     11111 11211    12346789999999866654421                   345666


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      +.+.++....-.+ ......++|+++|+++++-.
T Consensus       170 ~pdg~~~e~~a~G-~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       170 NPDGGKLRVVAHG-FQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             ecCCCeEEEEecC-cCCCccceECCCCCEEEEcc
Confidence            6655554333333 33457899999998776644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.10  E-value=0.39  Score=47.76  Aligned_cols=149  Identities=9%  Similarity=0.135  Sum_probs=92.8

Q ss_pred             CcEEEEecCCeEEEEeCCCCCCCCc---eeee--------------eecCCCCceEEEEEcc--CCCEEEEecCCCcEEE
Q psy17188        125 TKYVYTGGKGCVKVWDISQPGSKTP---VSQL--------------DCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSI  185 (504)
Q Consensus       125 ~~~l~~~~d~~i~vw~~~~~~~~~~---~~~~--------------~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i  185 (504)
                      ..+++.+..+.|.||+.+.......   ...+              ........|+.|....  +...|+.+.+||.|.+
T Consensus        49 ~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~  128 (717)
T PF08728_consen   49 RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVLA  128 (717)
T ss_pred             CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEEE
Confidence            6678888889999999865332111   0000              0000123355555544  5678899999999999


Q ss_pred             EeCCC-------C----C-------ccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECCCC--eE-EEeec
Q psy17188        186 WDLAS-------P----T-------PRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLHNQ--TL-VRQFQ  242 (504)
Q Consensus       186 w~~~~-------~----~-------~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~~~--~~-~~~~~  242 (504)
                      |.+++       .    .       ......+. -...++.+++.  ...++||+++....|.||-....  +. ...-.
T Consensus       129 Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~  207 (717)
T PF08728_consen  129 YYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSH  207 (717)
T ss_pred             EEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccccc
Confidence            97631       0    0       00112222 23368899998  77788998888888888765432  11 11111


Q ss_pred             CCCCCeEEEEEccCC---C---EEEEEcCCCeEEEEEC
Q psy17188        243 GHTDGASCIDISADG---T---KLWTGGLDNTVRSWDL  274 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~---~---~l~s~~~dg~i~~wd~  274 (504)
                      .|...|-+++|.++.   .   .+++++-.|.+.+|++
T Consensus       208 ~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  208 QHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            266788999997742   2   7888999999888877

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG3630|consensus

Probab=96.04  E-value=0.079  Score=54.09  Aligned_cols=150  Identities=9%  Similarity=0.015  Sum_probs=94.8

Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc------ccccCCCceEEEEEcCCCC-EEEEeeCCCcE
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL------DCLQRDNYIRSVKLLPDGR-TLIVGGEASNL  419 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i  419 (504)
                      ..+..+...+|.....++..+.+..|..||++.-.........      ..........++.|.|.=. ..++...|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            3566677778876555566666668999998754322211111      1112334456788887532 34556678888


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee----cCCceEEEEEccCCCE
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG----HTDGASCIDISADGTK  495 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~~~~s~d~~~  495 (504)
                      ++..+.......  .-.......++++|+|.|+.++.|-..|++.-|... ++....+.+    ....|.+|.|-....+
T Consensus       181 ~V~~~~~~~~~v--~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~ef  257 (1405)
T KOG3630|consen  181 RVKSTKQLAQNV--TSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEF  257 (1405)
T ss_pred             hhhhhhhhhhhh--cccCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeE
Confidence            888765332221  112234467899999999999999999999988753 343333332    1357999999887777


Q ss_pred             EEEe
Q psy17188        496 LWTG  499 (504)
Q Consensus       496 l~s~  499 (504)
                      |++-
T Consensus       258 lvvy  261 (1405)
T KOG3630|consen  258 LVVY  261 (1405)
T ss_pred             EEEe
Confidence            7653

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.98  E-value=0.33  Score=47.74  Aligned_cols=119  Identities=19%  Similarity=0.267  Sum_probs=75.2

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEc--cCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDIS--ADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      ..-+.-+.-++..++-+....+.|||.+.+.....-. ...+.|.+++|.  |+++.+++.+....|.++.-...     
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~-----  106 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRY-----  106 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccch-----
Confidence            3444445555544444455679999999887654433 357889999996  58889999999999999864311     


Q ss_pred             eecC-CCCCCCcccceecccC-CceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        283 DISQ-PGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       283 ~~~~-~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      +... ...-.++..+....+. .+|.+..|.++|..++.++  +.+.|+|-
T Consensus       107 dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  107 DYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             hhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence            1000 0111222233333333 6788999999997665543  46888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=95.90  E-value=0.55  Score=43.21  Aligned_cols=166  Identities=17%  Similarity=0.138  Sum_probs=91.1

Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC----cee-eEEECCCCCCceeeeccCCCeEEEE-
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP----ACY-ALAISPDSKSPFFSSHHYKSCVKVW-  375 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~----~i~-~~~~~~~~~~~~~~~~~~~~~i~i~-  375 (504)
                      ...+..+-..|||+.+.+-+. .++.++++.+.............+    .++ .+..-..+.  -+.....||.|.-| 
T Consensus       220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~--SLLv~~~dG~vsQWF  296 (733)
T COG4590         220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGF--SLLVVHEDGLVSQWF  296 (733)
T ss_pred             ccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCce--eEEEEcCCCceeeee
Confidence            345667788999999988765 678888887654333322222111    111 111111122  24455566666554 


Q ss_pred             ecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE
Q psy17188        376 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF  455 (504)
Q Consensus       376 d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~  455 (504)
                      |.+..............-...++..+.-..+.+-+++-..+|++..+.....+.........   .+.-+++||.+.+|+
T Consensus       297 dvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~---~~~~~~~Sp~~~~Ll  373 (733)
T COG4590         297 DVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ---APQLVAMSPNQAYLL  373 (733)
T ss_pred             eeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc---CcceeeeCcccchhe
Confidence            66554332211111111112233333333345567777788888888765544443333322   344569999999998


Q ss_pred             EeeCCCcEEEEEcCCcceE
Q psy17188        456 SCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       456 s~~~dg~i~iwd~~~~~~~  474 (504)
                      +- +.|.|+++.+++....
T Consensus       374 ~e-~~gki~~~~l~Nr~Pe  391 (733)
T COG4590         374 SE-DQGKIRLAQLENRNPE  391 (733)
T ss_pred             ee-cCCceEEEEecCCCCC
Confidence            76 4567999998876543

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=95.76  E-value=1.8  Score=40.73  Aligned_cols=16  Identities=6%  Similarity=0.044  Sum_probs=11.3

Q ss_pred             cEEEEeCCCCCcccee
Q psy17188        325 NLSIWDLASPTPRIKA  340 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~  340 (504)
                      .+.+||..+.++....
T Consensus       190 ~v~~YD~~t~~W~~~~  205 (376)
T PRK14131        190 EVLSYDPSTNQWKNAG  205 (376)
T ss_pred             eEEEEECCCCeeeECC
Confidence            5888998887665443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.71  E-value=0.83  Score=45.57  Aligned_cols=154  Identities=8%  Similarity=0.060  Sum_probs=94.4

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccce----eee----------------ccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIK----AEL----------------TSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~----~~~----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .++++++. .+.|.||+.........    ..+                ......|..+....-+...+++.+..||.|.
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~  127 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL  127 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence            66677764 67899998765432110    000                0022345666666556666899999999999


Q ss_pred             EEecCC-------C-------CCCCcccccccccCCCceEEEEEc--CCCCEEEEeeCCCcEEEeeCCCCCcc-eeeccc
Q psy17188        374 VWDISQ-------P-------GSKTPVSQLDCLQRDNYIRSVKLL--PDGRTLIVGGEASNLSIWDLASPTPR-IKAELT  436 (504)
Q Consensus       374 i~d~~~-------~-------~~~~~~~~~~~~~~~~~i~~~~~s--~~g~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~  436 (504)
                      +|..+.       .       .....+...-..........++++  ...++||+++....|.||-....... ......
T Consensus       128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~  207 (717)
T PF08728_consen  128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSH  207 (717)
T ss_pred             EEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccccc
Confidence            997632       0       000011111122234567889998  78889999888888888766542111 111122


Q ss_pred             CCCCceeEEEECCCC---C---EEEEeeCCCcEEEEEc
Q psy17188        437 SSAPACYALAISPDS---K---VCFSCCSDGNIAVWDL  468 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~---~---~l~s~~~dg~i~iwd~  468 (504)
                      .+...|-+++|-++.   .   +|++++-.|.+.+|++
T Consensus       208 ~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  208 QHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            345567788887743   2   7888999999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.70  E-value=0.72  Score=46.79  Aligned_cols=131  Identities=19%  Similarity=0.303  Sum_probs=69.3

Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCC------Cc-ccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKT------PV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  338 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~  338 (504)
                      |+.+.+||-....+...++.......      .. ..+......-.|..+.++|+|++++..+..| |.|..+... +..
T Consensus        41 d~~L~vWd~~e~~l~~~nlr~~~~~~~~~~~~~~q~L~~~~~~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r-~g~  118 (717)
T PF10168_consen   41 DGDLFVWDSSECCLLTVNLRSLESDAEGPAKSSYQKLLPSNPPLFEVHQISLNPTGSLLALVGPRG-VVVLELPRR-WGK  118 (717)
T ss_pred             CCEEEEEECCCCEEEEEeeccccccccCccccCcceeecCCCCceeEEEEEECCCCCEEEEEcCCc-EEEEEeccc-cCc
Confidence            67888888877766555444332211      11 1122223445789999999999999988765 444444321 000


Q ss_pred             eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEeeC
Q psy17188        339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGE  415 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~~~  415 (504)
                      ...+......+.|-.+.-+..  ++.                           ......|..+.|+|.   +..|++-+.
T Consensus       119 ~~~~~~g~~~i~Crt~~v~~~--~~~---------------------------~~~~~~i~qv~WhP~s~~~~~l~vLts  169 (717)
T PF10168_consen  119 NGEFEDGKKEINCRTVPVDER--FFT---------------------------SNSSLEIKQVRWHPWSESDSHLVVLTS  169 (717)
T ss_pred             cccccCCCcceeEEEEEechh--hcc---------------------------CCCCceEEEEEEcCCCCCCCeEEEEec
Confidence            111111111222222111111  110                           122345667888875   467777778


Q ss_pred             CCcEEEeeCCCC
Q psy17188        416 ASNLSIWDLASP  427 (504)
Q Consensus       416 dg~i~iwd~~~~  427 (504)
                      |+.+++||+...
T Consensus       170 dn~lR~y~~~~~  181 (717)
T PF10168_consen  170 DNTLRLYDISDP  181 (717)
T ss_pred             CCEEEEEecCCC
Confidence            888888887643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG2247|consensus

Probab=95.60  E-value=0.0089  Score=54.83  Aligned_cols=235  Identities=11%  Similarity=0.070  Sum_probs=134.3

Q ss_pred             EEcC-CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEE-ecCCCcEEEEeCCCCCcccee
Q psy17188        120 TISN-PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       120 ~~s~-~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~  197 (504)
                      .|-+ ++++++++.+..+..||-...    .+.   .....+....++|..++..++. +-..+.+.+||+.+.... ..
T Consensus        41 ~w~~e~~nlavaca~tiv~~YD~agq----~~l---e~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-qL  112 (615)
T KOG2247|consen   41 RWRPEGHNLAVACANTIVIYYDKAGQ----VIL---ELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-QL  112 (615)
T ss_pred             eEecCCCceehhhhhhHHHhhhhhcc----eec---ccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-HH
Confidence            3445 445555555989999995431    111   1123455667888888776655 445788999999865432 22


Q ss_pred             eeec-CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        198 ELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       198 ~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                      ...+ +...  -+.|++....++.+...|.+.|++..+.+.+-..-.|...++++++.+.+ +.+.++.|..+.+-...+
T Consensus       113 E~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd-~vil~dcd~~L~v~~qeg  189 (615)
T KOG2247|consen  113 ESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED-YVILCDCDNTLSVTTQEG  189 (615)
T ss_pred             hccCcchHH--HHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc-eeeecCcHHHHHHhhhcc
Confidence            2222 2222  27899999999999999999999988776665555599999999999976 667777777666555544


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE--EeCCCCCccceeeeccCCCceeeEEE
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI--WDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v--~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      .....++..........         .....=.|...|..+...-. |.+.+  -.........-..++...+.+.+..|
T Consensus       190 eta~ltevggepdnm~~---------~y~k~n~w~kage~m~sVvs-gKkhl~yak~nE~D~pval~fq~~~gni~cyrw  259 (615)
T KOG2247|consen  190 ETASLTEVGGEPDNMDF---------FYGKVNGWGKAGETMVSVVS-GKKHLMYAKYNELDEPVALQFQEKYGNIHCYRW  259 (615)
T ss_pred             ceeeeeeccCccchhhh---------heeeeeccccccceeeeeee-cHHHHHHHhhcCCCCccceEeeecCCceeEEEE
Confidence            44333322211110000         00111123334444443311 22211  12222222223356666678888888


Q ss_pred             CCCCCCceeeeccCCCeEEEEecC
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      --||.   +..+..-+.|..-...
T Consensus       260 ylDg~---i~igf~ag~iV~iS~h  280 (615)
T KOG2247|consen  260 YLDGY---ILIGFDAGYIVSISAH  280 (615)
T ss_pred             ecccc---ccccccceeEEEEecc
Confidence            88874   4444444555444443

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=95.59  E-value=1.7  Score=39.30  Aligned_cols=255  Identities=12%  Similarity=0.048  Sum_probs=113.7

Q ss_pred             CCCEEEEEeCCCcEEEEECCC--CeEEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCC-C
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHN--QTLVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPG-S  289 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~-~  289 (504)
                      ++++|+.|+++|. .+.++..  ++..+.+  +...|+++...+..+.|++-+ ....++.+++..-..+.-+..... .
T Consensus        12 ~~~~lL~GTe~Gl-y~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~   88 (302)
T smart00036       12 DGKWLLVGTEEGL-YVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV   88 (302)
T ss_pred             CCcEEEEEeCCce-EEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence            3368999998884 4555554  3343333  466899999998777666554 344599999853321100000000 0


Q ss_pred             CCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC--Cccceee----eccCCCceeeEEECCCCCCce
Q psy17188        290 KTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASP--TPRIKAE----LTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       290 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~--~~~~~~~----~~~~~~~i~~~~~~~~~~~~~  362 (504)
                      .... ......+.......+..... ..++++....+|.++.....  +......    ......++..+..+++.....
T Consensus        89 ~~~~-~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (302)
T smart00036       89 IRKN-VLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPG  167 (302)
T ss_pred             cccc-ceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceE
Confidence            0000 00111222212222222211 23344445566777654433  1111111    011122333444444432334


Q ss_pred             eeeccCCCeEEEEecCC--CCCCCcccccccccCC-CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC
Q psy17188        363 FSSHHYKSCVKVWDISQ--PGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  439 (504)
Q Consensus       363 ~~~~~~~~~i~i~d~~~--~~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  439 (504)
                      +..|...+...++++..  ................ .++ ++..-+++.+|++-  |....+-|...........+. -.
T Consensus       168 lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~-~i~~l~~~e~Llc~--~~~~v~Vn~~G~~~~r~~~l~-w~  243 (302)
T smart00036      168 ICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPI-SVVQVPRDEFLLCY--DEFGVFVNLYGKRRSRNPILH-WE  243 (302)
T ss_pred             EEEEEcCCCCeEEEEeecccccccccccccccccccCce-EEEEECCCeEEEEE--CcEEEEEeCCCCccccceEEE-cC
Confidence            55554433344444432  1111100000000111 233 33334455555553  333445555431111111111 12


Q ss_pred             CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      ....++++.  ..+|+.-..++ |.|+++.+++.++++..
T Consensus       244 ~~p~~~~~~--~pyll~~~~~~-ievr~l~~~~l~q~i~~  280 (302)
T smart00036      244 FMPESFAYH--SPYLLAFHDNG-IEIRSIKTGELLQELAD  280 (302)
T ss_pred             CcccEEEEE--CCEEEEEcCCc-EEEEECCCCceEEEEec
Confidence            233455665  46777665554 99999999999988874

Unpublished observations.

>PLN02193 nitrile-specifier protein

Probab=95.55  E-value=2.6  Score=41.07  Aligned_cols=154  Identities=8%  Similarity=0.081  Sum_probs=71.4

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCC-c-eeeEEECCCCCCceeeeccCC-----CeEEEEecCCC
Q psy17188        313 DGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAP-A-CYALAISPDSKSPFFSSHHYK-----SCVKVWDISQP  380 (504)
Q Consensus       313 ~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~-~-i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~  380 (504)
                      +++..+.|+.+     ..+..||+.+.++........... . -.+++. -+++  +++.++.+     ..+..||+.+.
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~--iYv~GG~~~~~~~~~~~~yd~~t~  304 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEEN--VYVFGGVSATARLKTLDSYNIVDK  304 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCE--EEEECCCCCCCCcceEEEEECCCC
Confidence            45566666654     358889988765544332211011 1 112222 2222  55555543     34667776543


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC----CcEEEeeCCCCCcceeecc---cCCCCceeEEEECCCCCE
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAEL---TSSAPACYALAISPDSKV  453 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d----g~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~s~~~~~  453 (504)
                      .-................ .++. -+++.++.++.+    ..+.+||+.+.+.......   +.......++.  -++++
T Consensus       305 ~W~~~~~~~~~~~~R~~~-~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~--~~~~i  380 (470)
T PLN02193        305 KWFHCSTPGDSFSIRGGA-GLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAA--VGKHI  380 (470)
T ss_pred             EEEeCCCCCCCCCCCCCc-EEEE-ECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEE--ECCEE
Confidence            211000000000001111 2222 256777777655    4589999987654333221   11111112222  25677


Q ss_pred             EEEeeCC--------------CcEEEEEcCCcce
Q psy17188        454 CFSCCSD--------------GNIAVWDLHNQTL  473 (504)
Q Consensus       454 l~s~~~d--------------g~i~iwd~~~~~~  473 (504)
                      ++.|+.+              ..+.+||+.+.+-
T Consensus       381 yv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W  414 (470)
T PLN02193        381 VIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQW  414 (470)
T ss_pred             EEECCccCCccccccCccceeccEEEEEcCcCEE
Confidence            7777753              2478888877654

>PHA02790 Kelch-like protein; Provisional

Probab=95.51  E-value=0.99  Score=44.02  Aligned_cols=146  Identities=12%  Similarity=0.065  Sum_probs=69.7

Q ss_pred             CCCEEEEEeCC--CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC---CeEEEEecCCCCCCCccc
Q psy17188        313 DGRTLIVGGEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK---SCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       313 ~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~i~i~d~~~~~~~~~~~  387 (504)
                      ++...++|+.+  ..+..||..+.++.....+.......  ....-+++  +++.|+.+   ..+..||.++..=.. ..
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~--~~~~~~g~--IYviGG~~~~~~~ve~ydp~~~~W~~-~~  392 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNP--AVASINNV--IYVIGGHSETDTTTEYLLPNHDQWQF-GP  392 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCccc--EEEEECCE--EEEecCcCCCCccEEEEeCCCCEEEe-CC
Confidence            56666777653  35788887766544333333222111  11222333  56666644   346677765431110 00


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC-----Cc
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GN  462 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-----g~  462 (504)
                      ..   .....-.++ ..-+++..+.|   |.+.+||.++.+................+.  -+++..+.|+.+     ..
T Consensus       393 ~m---~~~r~~~~~-~~~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v--~~~~IYviGG~~~~~~~~~  463 (480)
T PHA02790        393 ST---YYPHYKSCA-LVFGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELII--VDNKLLLIGGFYRGSYIDT  463 (480)
T ss_pred             CC---CCccccceE-EEECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEE--ECCEEEEECCcCCCcccce
Confidence            00   000001122 23356666666   357789987765444333332222222222  266777777754     24


Q ss_pred             EEEEEcCCcc
Q psy17188        463 IAVWDLHNQT  472 (504)
Q Consensus       463 i~iwd~~~~~  472 (504)
                      +..||..+++
T Consensus       464 ve~Yd~~~~~  473 (480)
T PHA02790        464 IEVYNNRTYS  473 (480)
T ss_pred             EEEEECCCCe
Confidence            5566665543

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=95.48  E-value=2  Score=39.40  Aligned_cols=152  Identities=15%  Similarity=0.203  Sum_probs=86.6

Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCc------EEEEeCCCCCc-------cceeeeccC--------CCceeeEEECCCCCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASN------LSIWDLASPTP-------RIKAELTSS--------APACYALAISPDSKS  360 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~------i~v~d~~~~~~-------~~~~~~~~~--------~~~i~~~~~~~~~~~  360 (504)
                      -+.+..+.+.+++..+++.+.+|.      +..+++.....       .....+...        .....++++.+++. 
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~-   97 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS-   97 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC-
Confidence            345788899866656666667776      66555543110       001111111        11455788866666 


Q ss_pred             ceeeeccCC------CeEEEEecCCCCCCCcc---ccc-------ccccCCCceEEEEEcCCCCEEEEeeCC-----C--
Q psy17188        361 PFFSSHHYK------SCVKVWDISQPGSKTPV---SQL-------DCLQRDNYIRSVKLLPDGRTLIVGGEA-----S--  417 (504)
Q Consensus       361 ~~~~~~~~~------~~i~i~d~~~~~~~~~~---~~~-------~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g--  417 (504)
                       ++++.-.+      ..|..++.. +.....+   ..+       .....+.....++++|||+.|+++.+.     +  
T Consensus        98 -~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~  175 (326)
T PF13449_consen   98 -FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPR  175 (326)
T ss_pred             -EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcc
Confidence             67777667      778888866 2222221   111       223456678899999999977665432     2  


Q ss_pred             c-------EEE--eeCCC-CC--cceeecccC-----CCCceeEEEECCCCCEEEE
Q psy17188        418 N-------LSI--WDLAS-PT--PRIKAELTS-----SAPACYALAISPDSKVCFS  456 (504)
Q Consensus       418 ~-------i~i--wd~~~-~~--~~~~~~~~~-----~~~~v~~l~~s~~~~~l~s  456 (504)
                      .       +++  ||..+ +.  ......+..     ....++.+.+-+++++|+.
T Consensus       176 ~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL  231 (326)
T PF13449_consen  176 ANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL  231 (326)
T ss_pred             cccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence            1       444  44443 21  122333332     4567888999999997774

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.43  E-value=0.59  Score=38.29  Aligned_cols=175  Identities=16%  Similarity=0.161  Sum_probs=92.3

Q ss_pred             CCCEEEEEeCC--CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188        313 DGRTLIVGGEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD  390 (504)
Q Consensus       313 ~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~  390 (504)
                      +|.++.+.+.-  ..|++||+.+++......+..  ..+..--...-+.. +....-.++.-..+|.++-+.....    
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~gd~-~y~LTw~egvaf~~d~~t~~~lg~~----  127 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKLGDY-FYQLTWKEGVAFKYDADTLEELGRF----  127 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeeccce-EEEEEeccceeEEEChHHhhhhccc----
Confidence            34555555443  369999999886544444431  12222111222222 3333445777777877653222111    


Q ss_pred             cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        391 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                        ..++.  .-....|++.|+.++....++.-|.++-............   ..++.+.|- ||...|-.-.+..|...+
T Consensus       128 --~y~Ge--GWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~  202 (262)
T COG3823         128 --SYEGE--GWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARID  202 (262)
T ss_pred             --ccCCc--ceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEc
Confidence              11222  2233345666777666666777776554333222222222   223344443 566666555556677777


Q ss_pred             cCCcceEEEEe------------ecCCceEEEEEccCC-CEEEEe
Q psy17188        468 LHNQTLVRQFQ------------GHTDGASCIDISADG-TKLWTG  499 (504)
Q Consensus       468 ~~~~~~~~~~~------------~h~~~v~~~~~s~d~-~~l~s~  499 (504)
                      .++|+.+..+.            .|.+-.+.+++.|++ ++++||
T Consensus       203 p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         203 PDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             CCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            88887776554            344567889999987 555554

>PLN02153 epithiospecifier protein

Probab=95.42  E-value=2.2  Score=39.52  Aligned_cols=85  Identities=9%  Similarity=-0.079  Sum_probs=42.0

Q ss_pred             CcEEEeeCCCCCcceeecc---cCCCCceeEEEECCCCCEEEEeeCC--------------CcEEEEEcCCcceEEEEe-
Q psy17188        417 SNLSIWDLASPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSD--------------GNIAVWDLHNQTLVRQFQ-  478 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~s~~~~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~-  478 (504)
                      ..+.+||..+.+.......   +........+.  -++++++.|+..              ..+..+|..+.+-...-. 
T Consensus       217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~  294 (341)
T PLN02153        217 NAVQFFDPASGKWTEVETTGAKPSARSVFAHAV--VGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGEC  294 (341)
T ss_pred             CceEEEEcCCCcEEeccccCCCCCCcceeeeEE--ECCEEEEECcccCCccccccccccccccEEEEEcCccEEEeccCC
Confidence            4588999887654433211   11111112222  256777777742              257788877654321110 


Q ss_pred             ----ecCCc--eEEEEEccCCCEEEEecCCC
Q psy17188        479 ----GHTDG--ASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       479 ----~h~~~--v~~~~~s~d~~~l~s~s~Dg  503 (504)
                          .....  ..++....+++.++.||.++
T Consensus       295 ~~~~~pr~~~~~~~~~v~~~~~~~~~gG~~~  325 (341)
T PLN02153        295 GEPAMPRGWTAYTTATVYGKNGLLMHGGKLP  325 (341)
T ss_pred             CCCCCCCccccccccccCCcceEEEEcCcCC
Confidence                01111  22344444567888888754

>PLN02153 epithiospecifier protein

Probab=95.37  E-value=2.3  Score=39.40  Aligned_cols=109  Identities=17%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             CCCEEEEecCC-----CcEEEEeCCCCCccceeeeec---CcCceEEEEECCCCCEEEEEeCC-----------CcEEEE
Q psy17188        170 DGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTS---SAPACYALAISPDSKVCFSCCSD-----------GNIAVW  230 (504)
Q Consensus       170 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~d-----------g~i~iw  230 (504)
                      ++++++.|+.+     ..+.+||+.+.+......+..   ........+..-++++.+.|+.+           ..+.+|
T Consensus        85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y  164 (341)
T PLN02153         85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY  164 (341)
T ss_pred             CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence            56677777643     357888988765432222210   11111111122355666676643           247788


Q ss_pred             ECCCCeEEEeecC-----CCCCeEEEEEccCCCEEEEEcCC-------------CeEEEEECCCCceE
Q psy17188        231 DLHNQTLVRQFQG-----HTDGASCIDISADGTKLWTGGLD-------------NTVRSWDLREGCVK  280 (504)
Q Consensus       231 d~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~~~  280 (504)
                      |..+.+-...-..     ..... +++. -++++++.++.+             ..+.+||+.+.+..
T Consensus       165 d~~~~~W~~l~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~  230 (341)
T PLN02153        165 NIADGKWVQLPDPGENFEKRGGA-GFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWT  230 (341)
T ss_pred             ECCCCeEeeCCCCCCCCCCCCcc-eEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEE
Confidence            9887654321110     01111 2222 245565655432             35778888776643

>KOG2377|consensus

Probab=95.35  E-value=0.44  Score=43.88  Aligned_cols=106  Identities=10%  Similarity=0.171  Sum_probs=76.5

Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce--eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ...++|.++.||+|.+.||+--.+.+|.+++....+...  ..+.+.....|....|+.. .-+|.....| +-+|-+..
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p  141 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP  141 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch
Confidence            345689999999999999999999999999985444332  2334445556888899866 5667666666 77776644


Q ss_pred             c-ceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        471 Q-TLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       471 ~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      . +.++..+.|+-.|+--.|.++.+.+.-++
T Consensus       142 ekrslRlVks~~~nvnWy~yc~et~v~LL~t  172 (657)
T KOG2377|consen  142 EKRSLRLVKSHNLNVNWYMYCPETAVILLST  172 (657)
T ss_pred             hhhhhhhhhhcccCccEEEEccccceEeeec
Confidence            3 33555667888899999999877655443

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=95.33  E-value=2.3  Score=39.08  Aligned_cols=111  Identities=11%  Similarity=0.061  Sum_probs=54.2

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeE---EEeecCCCCCe--EEEEEccCCCEEEEEcCC-----CeEEEEECCCCc
Q psy17188        214 DSKVCFSCCSD-----GNIAVWDLHNQTL---VRQFQGHTDGA--SCIDISADGTKLWTGGLD-----NTVRSWDLREGC  278 (504)
Q Consensus       214 ~~~~l~~~~~d-----g~i~iwd~~~~~~---~~~~~~h~~~v--~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~  278 (504)
                      ++.+++.|+.+     ..+..+|+.+.+.   ...+..-..+.  .+++. -++++.+.|+..     ..+..||+.+.+
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~  150 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE  150 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence            55566667654     3467777776553   12221111111  12222 246666666642     357788888766


Q ss_pred             eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC----cEEEEeCCCCCccce
Q psy17188        279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----NLSIWDLASPTPRIK  339 (504)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~~~~  339 (504)
                      ....   .+        +   .........+...+++..+.|+.++    .+.+||.++.++...
T Consensus       151 W~~~---~~--------~---p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~  201 (323)
T TIGR03548       151 WFEL---PD--------F---PGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKV  201 (323)
T ss_pred             eeEC---CC--------C---CCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEEC
Confidence            4321   10        0   0000111122233566777776653    356889887765433

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>KOG1916|consensus

Probab=95.32  E-value=0.037  Score=54.88  Aligned_cols=129  Identities=13%  Similarity=0.200  Sum_probs=79.7

Q ss_pred             cCCCcEEEEEEcC----CCcEEEEecCCeEEEEeCCC--CCCCCceeeeeecCCCCceEEEEEcc---CCCEEEEecCCC
Q psy17188        111 SHGEVVCAVTISN----PTKYVYTGGKGCVKVWDISQ--PGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEAS  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~----~~~~l~~~~d~~i~vw~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg  181 (504)
                      +..+.|-.+.|-.    .++.+    -|.+.||+++-  |+....+...........+.-+.|.|   +.-++..+-.++
T Consensus       130 gf~G~v~dl~fah~~~pk~~~~----vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~  205 (1283)
T KOG1916|consen  130 GFPGGVGDLQFAHTKCPKGRRL----VGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG  205 (1283)
T ss_pred             cCCCCcccccccccCChHHHHH----hhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence            5566777777653    23211    36788998764  22222222222222334445566665   677888888899


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEE-----------ECCCCCEEEEEeCCCcEEEEECC-----CCeEEEeecCCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALA-----------ISPDSKVCFSCCSDGNIAVWDLH-----NQTLVRQFQGHT  245 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~-----------~s~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~h~  245 (504)
                      ++++.+++....   ..+.+|...+..++           .+|||+.++.++.||.++.|.+.     .-.++...+.|+
T Consensus       206 ~i~lL~~~ra~~---~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd  282 (1283)
T KOG1916|consen  206 EIRLLNINRALR---SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD  282 (1283)
T ss_pred             ceeEeeechHHH---HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence            999888765432   23344666665544           58999999999999998888754     234455566676


Q ss_pred             C
Q psy17188        246 D  246 (504)
Q Consensus       246 ~  246 (504)
                      +
T Consensus       283 ~  283 (1283)
T KOG1916|consen  283 K  283 (1283)
T ss_pred             C
Confidence            3

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=95.22  E-value=0.9  Score=34.47  Aligned_cols=113  Identities=14%  Similarity=0.192  Sum_probs=65.7

Q ss_pred             ceeeeccCCCeEEEEecCCCCCCC--cccccccccCCCceEEEEEcC-----CCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKT--PVSQLDCLQRDNYIRSVKLLP-----DGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~--~~~~~~~~~~~~~i~~~~~s~-----~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      ..++.+...+.|.|++........  .........-...|++++-.+     +...|+.|+ ...+..||+.....+...
T Consensus        11 pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~Fyk   89 (136)
T PF14781_consen   11 PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDLFYK   89 (136)
T ss_pred             eeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchhhhh
Confidence            367777788888888876543221  222223334456677775544     345677765 456999999877666555


Q ss_pred             cccCCCCceeEEEE---CCCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188        434 ELTSSAPACYALAI---SPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       434 ~~~~~~~~v~~l~~---s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  477 (504)
                      +....   |+++.+   .....-|+..+.+..|.-||.+..+...+.
T Consensus        90 e~~DG---vn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV  133 (136)
T PF14781_consen   90 EVPDG---VNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV  133 (136)
T ss_pred             hCccc---eeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence            55543   444444   332334444445666777776655554443

>KOG0918|consensus

Probab=95.16  E-value=2.4  Score=38.51  Aligned_cols=108  Identities=13%  Similarity=0.101  Sum_probs=66.5

Q ss_pred             CCcEEEEECCCCeEEEeecCCCC--CeEEEEEccC----CCEEEEEcCCCeEEEEECCCCceE---EEeecCCCCCCCcc
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTD--GASCIDISAD----GTKLWTGGLDNTVRSWDLREGCVK---VWDISQPGSKTPVS  294 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~----~~~l~s~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~~~~  294 (504)
                      ...+.+|...+++..+++.-.+.  -+.++.|..+    ....-++-.++..+++.....+..   +..+...    .+.
T Consensus       228 g~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~p~~~~~fvg~Al~s~i~~~~k~~~~tws~~~visvp~~----kv~  303 (476)
T KOG0918|consen  228 GSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHNPSKATGFVGCALSSNIFRFFKNSDDTWSAEVVISVPPL----KVE  303 (476)
T ss_pred             eeeeEEEecCCccceeEEecCCCCcceEEeeeccCCCcccceeeeeccCCceeeeeccccccceeEEEecCcc----ccc
Confidence            34689999999998888875442  3556666432    224445555667777765543221   1111111    111


Q ss_pred             cceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCC
Q psy17188        295 QLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPT  335 (504)
Q Consensus       295 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~  335 (504)
                      ......-.+-|+.+-.|-|.++|.+... -|.|+-||+....
T Consensus       304 ~w~~~eMP~LITDilISmDDRFLYvs~WLHGDirQYdIsDP~  345 (476)
T KOG0918|consen  304 NWILPEMPGLITDILISLDDRFLYVSNWLHGDIRQYDISDPK  345 (476)
T ss_pred             cccCcccchhhheeEEeecCcEEEEEeeeecceeeeccCCCC
Confidence            1222344566889999999999988754 6789999998764

>PRK13684 Ycf48-like protein; Provisional

Probab=95.01  E-value=2.9  Score=38.52  Aligned_cols=157  Identities=11%  Similarity=0.095  Sum_probs=82.2

Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      ...+..+.+.+++.+++++ ..|.+..- .+................+..+.+.++++  +++.+ ..|.+++-..+.+.
T Consensus       172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~--~~~vg-~~G~~~~~s~d~G~  246 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVS-SRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGN--LWMLA-RGGQIRFNDPDDLE  246 (334)
T ss_pred             cceEEEEEECCCCeEEEEe-CCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCC--EEEEe-cCCEEEEccCCCCC
Confidence            4567889999988776665 44554432 11111112222233445788899999887  44444 45655432222222


Q ss_pred             CCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-cCCCCceeEEEECCCCCEEEEeeCC
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                      .-.... .........+..+.+.+++..++++ .+|.+. .....++.-..... ..-....+.+.|..+++.+++| ..
T Consensus       247 sW~~~~-~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~  322 (334)
T PRK13684        247 SWSKPI-IPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLG-QR  322 (334)
T ss_pred             cccccc-CCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEEC-CC
Confidence            111111 1101122346788999988766554 567554 33343332222211 1222356777877777666644 67


Q ss_pred             CcEEEEE
Q psy17188        461 GNIAVWD  467 (504)
Q Consensus       461 g~i~iwd  467 (504)
                      |.|..|+
T Consensus       323 G~il~~~  329 (334)
T PRK13684        323 GVLLRYV  329 (334)
T ss_pred             ceEEEec
Confidence            8777665

>KOG1900|consensus

Probab=95.01  E-value=1.9  Score=45.52  Aligned_cols=163  Identities=13%  Similarity=0.205  Sum_probs=100.9

Q ss_pred             ceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEE--------EccCCCEEEEe
Q psy17188        106 QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK--------LLPDGRTLIVG  177 (504)
Q Consensus       106 ~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~  177 (504)
                      .+..++|...-+.+-+-|.=..+-..-|+.+.+|++++++....+.     +-+..|..+.        |-|.=++|++-
T Consensus        71 l~eq~~~~~~~~~mGiFpeI~RaWiTiDn~L~lWny~~~~e~~~~d-----~~shtIl~V~LvkPkpgvFv~~IqhlLvv  145 (1311)
T KOG1900|consen   71 LLEQFSNIECKTDMGIFPEIGRAWITIDNNLFLWNYESDNELAEYD-----GLSHTILKVGLVKPKPGVFVPEIQHLLVV  145 (1311)
T ss_pred             HHHHhcCcceeeeeccchhhcceEEEeCCeEEEEEcCCCCcccccc-----chhhhheeeeeecCCCCcchhhhheeEEe
Confidence            3344456666667777776556666668999999999865444333     2223344443        34444555555


Q ss_pred             cCCCcEEEEeCCCCCcc-------ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC----CCC---e-E-----
Q psy17188        178 GEASNLSIWDLASPTPR-------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL----HNQ---T-L-----  237 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~----~~~---~-~-----  237 (504)
                      ..--.|.++-+.-.+..       ....+....-.|.|+....+|+.+++| .||  .+|.+    .++   + +     
T Consensus       146 aT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kicl  222 (1311)
T KOG1900|consen  146 ATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICL  222 (1311)
T ss_pred             cccceEEEEEEEeccccCcccccccceeeecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccC
Confidence            55566777755322211       112233345568899988888776655 566  44443    221   1 0     


Q ss_pred             -----------EEeec-CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        238 -----------VRQFQ-GHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       238 -----------~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                                 +-.+. .+..+|..+.+...-+.+.+-+..++|.+||+..
T Consensus       223 t~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  223 TKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             chhHHHHhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                       11123 4677999999998888999999999999999987

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=94.94  E-value=3.3  Score=39.74  Aligned_cols=272  Identities=11%  Similarity=0.089  Sum_probs=126.1

Q ss_pred             CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE
Q psy17188        202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK  280 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~  280 (504)
                      ....|..+.+..+|. +..|+.|| +..||..+++.++.-.... ..|..+..+-.+ .|..|+.+| +.+.+.+..+..
T Consensus       163 ~d~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~s  238 (671)
T COG3292         163 KDTPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRAS  238 (671)
T ss_pred             cCccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhcccc
Confidence            345588888888774 55677776 7778888888776654433 566666555555 567777666 666666552221


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                           .-.         ..-....|..+.-..+|. +-.|+.+|..+.---+.+-..........-..+.++....++. 
T Consensus       239 -----n~~---------~~lp~~~I~ll~qD~qG~-lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-  302 (671)
T COG3292         239 -----NWG---------PMLPSGNILLLVQDAQGE-LWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-  302 (671)
T ss_pred             -----ccC---------CCCcchheeeeecccCCC-EEEeecccceeEecCCCCccccccccCCccccccceeeccCCC-
Confidence                 111         111122333333333443 6666666643322111111111111122223455555566665 


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcEEEeeCCCCCcceeecccCC
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  438 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  438 (504)
                        +-++..++.+++-+.+-.. ...+.    ......+-..+..|  .+..+-....-|.+.+-+-.++..... .....
T Consensus       303 --LWv~t~~giv~~~~a~w~~-ma~in----~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~s-v~q~R  374 (671)
T COG3292         303 --LWVGTYGGIVRYLTADWKR-MAVIN----DSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRS-VHQLR  374 (671)
T ss_pred             --EeeeccCceEEEecchhhh-eeeee----cCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEE-eeecc
Confidence              5566666666654432100 00000    00000000111111  111111122222233333333332222 11222


Q ss_pred             CCceeEEEECCCCCEEEEeeCCCcEEEEEcCC-cceEEEEee-cCCceEEEEEccCCCEEEEecCCC
Q psy17188        439 APACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQG-HTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       439 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ...|+.+++..+++. -.++...-+..|+.++ +..+....+ ..++|..+.=.||++ |..|+.+|
T Consensus       375 g~nit~~~~d~~g~l-Wlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~G  439 (671)
T COG3292         375 GMNITTTLEDSRGRL-WLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGG  439 (671)
T ss_pred             ccccchhhhccCCcE-EEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCC
Confidence            234556666665544 4444443366676666 333333322 345788888888887 66666665

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.88  E-value=2.1  Score=40.25  Aligned_cols=148  Identities=16%  Similarity=0.181  Sum_probs=81.3

Q ss_pred             CCCEEEE-EeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc-----eeeeccCCCeEEEEecCCCCCCCcc
Q psy17188        313 DGRTLIV-GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP-----FFSSHHYKSCVKVWDISQPGSKTPV  386 (504)
Q Consensus       313 ~~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~i~i~d~~~~~~~~~~  386 (504)
                      +..+|+. +.....++-.|++.++  ...+...+. .+ -+.+.|..+..     .-+.|-.+..|.-.|-+..+.....
T Consensus       478 dssli~~dg~~~~kLykmDIErGk--vveeW~~~d-dv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v  553 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGK--VVEEWDLKD-DV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV  553 (776)
T ss_pred             CcceEEecCCCcccceeeecccce--eeeEeecCC-cc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence            4444443 3344456666666653  333333333 22 45566654321     1233444555555555544322222


Q ss_pred             cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       387 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ...+.........+..-.. ..++|+++..|.|++||.-..  .....+++-...|..+..+.+|+++++.+.. .+.+-
T Consensus       554 ~esKdY~tKn~Fss~~tTe-sGyIa~as~kGDirLyDRig~--rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~  629 (776)
T COG5167         554 VESKDYKTKNKFSSGMTTE-SGYIAAASRKGDIRLYDRIGK--RAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLT  629 (776)
T ss_pred             eeehhcccccccccccccc-CceEEEecCCCceeeehhhcc--hhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEE
Confidence            2222222233333333333 458999999999999996532  3344566677788889999999998877654 46666


Q ss_pred             Ec
Q psy17188        467 DL  468 (504)
Q Consensus       467 d~  468 (504)
                      |+
T Consensus       630 d~  631 (776)
T COG5167         630 DV  631 (776)
T ss_pred             ec
Confidence            65

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=94.77  E-value=1.3  Score=44.02  Aligned_cols=242  Identities=14%  Similarity=0.088  Sum_probs=123.3

Q ss_pred             cccCCCCCccccceeeecCCCcEEEEEEcCC-CcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC
Q psy17188         94 ALIGPGIPRHARQINTLSHGEVVCAVTISNP-TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  172 (504)
                      .+..+++|.-...+..+.|-+.++.+.|.-+ |..+..--|.+       ..  ..++..  ...-.+.|-..+||.|.+
T Consensus        57 ~l~~F~ip~f~dkl~s~~hf~~~~~~~f~~~~gDii~~~~dp~-------p~--e~~~ei--vG~v~nGIvaa~wS~DE~  125 (1243)
T COG5290          57 GLKRFEIPFFPDKLLSFKHFHVLTFEYFLIDEGDIIHLVNDPT-------PA--ELEMEI--VGKVSNGIVAASWSADEK  125 (1243)
T ss_pred             heeEeccCCcchHhhhhhhhhhhheeeEEecCCcEEEEEcCCC-------cc--cchhhh--hccccCceEEEeeccCCc
Confidence            3445566666677777788888888877643 33332222222       11  111111  113467888999999999


Q ss_pred             EEEEecCCCcEEEEeCCCCC-------ccceeeeecCcCceEEEEEC-----------------C-------CCCEEEEE
Q psy17188        173 TLIVGGEASNLSIWDLASPT-------PRIKAELTSSAPACYALAIS-----------------P-------DSKVCFSC  221 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~~~~~v~~~~~s-----------------~-------~~~~l~~~  221 (504)
                      .++....+.+|.+++-.-..       ..-...+..|    ..+.|-                 |       .|+ |...
T Consensus       126 ~~cvvt~~r~il~~~k~fd~ise~~L~~~dl~ef~kh----i~VgWgkketqfrgk~~raqlrdptmp~~vD~G~-l~av  200 (1243)
T COG5290         126 TWCVVTSTREILLFDKYFDPISEYHLKKSDLVEFGKH----IRVGWGKKETQFRGKGARAQLRDPTMPYMVDYGD-LFAV  200 (1243)
T ss_pred             eEEEEEcCceEEEEeccccccchhhcchhHHHHhccc----eEeeecccchhccccchhhhccCCCCcccccccc-eeEe
Confidence            77777777788887632110       0000000011    112221                 1       122 2223


Q ss_pred             eCCCcEEEEECCCC------------eEEEee------cC----CCCCeEEEEEccCCCEEEEEcCCC-----eEEEEEC
Q psy17188        222 CSDGNIAVWDLHNQ------------TLVRQF------QG----HTDGASCIDISADGTKLWTGGLDN-----TVRSWDL  274 (504)
Q Consensus       222 ~~dg~i~iwd~~~~------------~~~~~~------~~----h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~  274 (504)
                      .....+..|.-++.            +..+.+      ..    .++.-..+.|-|+|..+++-..||     .+.++..
T Consensus       201 d~~k~~i~wrgD~~y~~v~r~Ee~prra~rvysreg~lds~sep~~g~e~~LSWkpqgS~~ati~td~~~~S~~ViFfEr  280 (1243)
T COG5290         201 DTNKKIIFWRGDTEYNLVGRSEERPRRAFRVYSREGQLDSASEPVTGMEHQLSWKPQGSKYATIGTDGCSTSESVIFFER  280 (1243)
T ss_pred             eCCceEEEEccCcceeeecchhcccccceeeeccccccccccCCcccchhccccccCCceeeeeccCCCCCcceEEEEcc
Confidence            33344555521111            011111      11    122223478999999999987665     3555543


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      +.-+.--             .-.....+.....++|+-....++++ ..+.+++|-..+-.+-...+  ..-..+.-+.|
T Consensus       281 NGLrHGe-------------f~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyhWYLK~e--~~ip~~s~vkw  344 (1243)
T COG5290         281 NGLRHGE-------------FDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYHWYLKVE--RQIPGISYVKW  344 (1243)
T ss_pred             CCcccCC-------------ccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceEEEEEEe--ecCCCcceeee
Confidence            3211100             00111223345566776665555544 45679999877664433333  33346778899


Q ss_pred             CCCCCCceeeecc
Q psy17188        355 SPDSKSPFFSSHH  367 (504)
Q Consensus       355 ~~~~~~~~~~~~~  367 (504)
                      +|.....++.++.
T Consensus       345 hpe~~nTl~f~d~  357 (1243)
T COG5290         345 HPEEKNTLLFRDG  357 (1243)
T ss_pred             ccccCcEEEEecC
Confidence            9988875555543

>PLN02193 nitrile-specifier protein

Probab=94.77  E-value=4.4  Score=39.46  Aligned_cols=157  Identities=14%  Similarity=0.109  Sum_probs=74.5

Q ss_pred             CCCEEEEecCC-------CcEEEEeCCCCCccceeeeecCc--CceEEEEECCCCCEEEEEeCC-----CcEEEEECCCC
Q psy17188        170 DGRTLIVGGEA-------SNLSIWDLASPTPRIKAELTSSA--PACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQ  235 (504)
Q Consensus       170 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~  235 (504)
                      ++..++.|+.+       ..+.+||+.+.+...........  .........-++.+.+.|+.+     ..+.++|+.+.
T Consensus       175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~  254 (470)
T PLN02193        175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN  254 (470)
T ss_pred             CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC
Confidence            45566666642       24778888765543211100000  011111112255666666654     35888998876


Q ss_pred             eEEEeecC----CCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        236 TLVRQFQG----HTDGASCIDISADGTKLWTGGLDN-----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       236 ~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      +-...-..    ....-.++.. -++++++.|+.++     .+..||+.+.+......  +.. .+       .......
T Consensus       255 ~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~~~-~~-------~~R~~~~  323 (470)
T PLN02193        255 EWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKWFHCST--PGD-SF-------SIRGGAG  323 (470)
T ss_pred             EEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCC--CCC-CC-------CCCCCcE
Confidence            54332111    0111112222 2456667776543     46778887765432111  000 00       0011111


Q ss_pred             EEEEcCCCCEEEEEeCC----CcEEEEeCCCCCccce
Q psy17188        307 SVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIK  339 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~  339 (504)
                      .+.  -+++.++.++.+    ..+.+||+.+.++...
T Consensus       324 ~~~--~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~  358 (470)
T PLN02193        324 LEV--VQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQV  358 (470)
T ss_pred             EEE--ECCcEEEEECCCCCccCceEEEECCCCEEEEe
Confidence            122  256677776654    4589999988765443

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.74  E-value=2.1  Score=35.66  Aligned_cols=104  Identities=15%  Similarity=0.285  Sum_probs=64.6

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC------cEEEE-ECCC----CeEEE-
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG------NIAVW-DLHN----QTLVR-  239 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------~i~iw-d~~~----~~~~~-  239 (504)
                      +.|+.+.....|.+|++..........+..- +.|..+.++..|++|++--.+.      .+++| |++.    .+.++ 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            4454445567899999996666556655544 6799999999999999875432      45554 2221    11111 


Q ss_pred             eecC---------------------CCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCc
Q psy17188        240 QFQG---------------------HTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       240 ~~~~---------------------h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      .+-|                     -..++.+++..| .|+ |+.|+ ++.+.+|.+....
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~-LlVg~-~~~l~lf~l~~~~  166 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGN-LLVGC-GNKLVLFTLKYQT  166 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCC-EEEEc-CCEEEEEEEEEEE
Confidence            1112                     234667888888 454 44444 4678888876544

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=94.61  E-value=4.4  Score=38.71  Aligned_cols=107  Identities=14%  Similarity=0.076  Sum_probs=61.2

Q ss_pred             cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeee---ecCCCCceEEEEEccCC------CEEEEec------
Q psy17188        115 VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD---CLQRDNYIRSVKLLPDG------RTLIVGG------  178 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~------~~l~~~~------  178 (504)
                      .-..|+|.||+++|++-. .|.|++++-.++. ...+..+.   .....+....|+|+|+-      .+|....      
T Consensus        31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~-~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~  109 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTERATGKILRVNPETGE-VKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGD  109 (454)
T ss_pred             CceEEEEcCCCeEEEEEecCCEEEEEeCCCCc-eeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCC
Confidence            447899999999999988 6999999865432 11121111   11136778999999874      2444331      


Q ss_pred             ----CCCcEEEEeCCCCC--cc-ceeeee------cCcCceEEEEECCCCCEEEEEeCC
Q psy17188        179 ----EASNLSIWDLASPT--PR-IKAELT------SSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       179 ----~dg~i~iw~~~~~~--~~-~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                          ....|.-|.+....  .. ....+.      .|.  -..|+|.|||.+.++.+..
T Consensus       110 ~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       110 KELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence                12345555554211  10 011111      233  3468899999866655543

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=94.55  E-value=3.7  Score=37.67  Aligned_cols=147  Identities=17%  Similarity=0.245  Sum_probs=84.5

Q ss_pred             CcEEEEEEc-CCCcEEEEecCCe------EEEEeCCCCC-CCCce---eeeeecCCCC--------ceEEEEEccCCCEE
Q psy17188        114 EVVCAVTIS-NPTKYVYTGGKGC------VKVWDISQPG-SKTPV---SQLDCLQRDN--------YIRSVKLLPDGRTL  174 (504)
Q Consensus       114 ~~V~~v~~s-~~~~~l~~~~d~~------i~vw~~~~~~-~~~~~---~~~~~~~~~~--------~v~~~~~s~~~~~l  174 (504)
                      +.++.+.+. .++++++.+.++.      +...++.... ....+   ....+....+        ...+|++.+++.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            567889998 5778888877776      6666654411 11111   1111111111        34488887788877


Q ss_pred             EEecCC------CcEEEEeCCCCCccceeee-------------ecCcCceEEEEECCCCCEEEEEeC-----CC--c--
Q psy17188        175 IVGGEA------SNLSIWDLASPTPRIKAEL-------------TSSAPACYALAISPDSKVCFSCCS-----DG--N--  226 (504)
Q Consensus       175 ~~~~~d------g~i~iw~~~~~~~~~~~~~-------------~~~~~~v~~~~~s~~~~~l~~~~~-----dg--~--  226 (504)
                      ++.-.+      ..|+.++.. ++......+             .......-+|+++|+|+.|+++.+     |+  .  
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            776555      678888765 332211111             123445789999999997776643     22  1  


Q ss_pred             -----EEE--EECCC-C----eEEEeecC-----CCCCeEEEEEccCCCEEE
Q psy17188        227 -----IAV--WDLHN-Q----TLVRQFQG-----HTDGASCIDISADGTKLW  261 (504)
Q Consensus       227 -----i~i--wd~~~-~----~~~~~~~~-----h~~~v~~~~~~~~~~~l~  261 (504)
                           +++  +|..+ +    +....+..     ....|..+.+.+++++|+
T Consensus       179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv  230 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV  230 (326)
T ss_pred             ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence                 444  45444 2    12223332     356788999999988655

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.52  E-value=3.8  Score=37.61  Aligned_cols=107  Identities=12%  Similarity=0.143  Sum_probs=53.5

Q ss_pred             CCCEEEEecCC-----CcEEEEeCCCCCcc----ceeeeecCcCceEEEEECCCCCEEEEEeC-----CCcEEEEECCCC
Q psy17188        170 DGRTLIVGGEA-----SNLSIWDLASPTPR----IKAELTSSAPACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQ  235 (504)
Q Consensus       170 ~~~~l~~~~~d-----g~i~iw~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~  235 (504)
                      ++.+++.|+.+     ..+..+|+.+.+..    ....+....... +++. -++++.+.|+.     ...+..||+.+.
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~-~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~  149 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENG-SACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQ  149 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCc-eEEE-ECCEEEEEeCcCCCccCceEEEEcCCCC
Confidence            56666777654     34677777665431    111111111111 2222 25566666664     235888898876


Q ss_pred             eEEEe--ecCCCCCeEEEEEccCCCEEEEEcCCC----eEEEEECCCCce
Q psy17188        236 TLVRQ--FQGHTDGASCIDISADGTKLWTGGLDN----TVRSWDLREGCV  279 (504)
Q Consensus       236 ~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg----~i~~wd~~~~~~  279 (504)
                      +-...  +.. .......+..-++++.+.|+.++    .+.+||+.+.+.
T Consensus       150 ~W~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W  198 (323)
T TIGR03548       150 EWFELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW  198 (323)
T ss_pred             CeeECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence            43322  221 11112222233566777787664    346788887654

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=94.51  E-value=3.9  Score=37.78  Aligned_cols=208  Identities=14%  Similarity=0.221  Sum_probs=109.0

Q ss_pred             CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE--EEEE-eCC---CcEEEE
Q psy17188        256 DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT--LIVG-GEA---SNLSIW  329 (504)
Q Consensus       256 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~-~~d---g~i~v~  329 (504)
                      ...+++....++-+.+||+...++......         ...   .-+-...+.+  +|+.  |+++ .++   ..|++|
T Consensus        67 ~kSlIigTdK~~GL~VYdL~Gk~lq~~~~G---------r~N---NVDvrygf~l--~g~~vDlavas~R~~g~n~l~~f  132 (381)
T PF02333_consen   67 AKSLIIGTDKKGGLYVYDLDGKELQSLPVG---------RPN---NVDVRYGFPL--NGKTVDLAVASDRSDGRNSLRLF  132 (381)
T ss_dssp             GG-EEEEEETTTEEEEEETTS-EEEEE-SS----------EE---EEEEEEEEEE--TTEEEEEEEEEE-CCCT-EEEEE
T ss_pred             ccceEEEEeCCCCEEEEcCCCcEEEeecCC---------Ccc---eeeeecceec--CCceEEEEEEecCcCCCCeEEEE
Confidence            456788888889999999998776433210         000   0011122233  3332  3333 332   468899


Q ss_pred             eCCCCCccceee------eccCCCceeeEEE--CCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCCCceEE
Q psy17188        330 DLASPTPRIKAE------LTSSAPACYALAI--SPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRDNYIRS  400 (504)
Q Consensus       330 d~~~~~~~~~~~------~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~~  400 (504)
                      .+..........      +......+..+++  ++.....+++....+|.+..|.+...... ......+...-...+..
T Consensus       133 ~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EG  212 (381)
T PF02333_consen  133 RIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEG  212 (381)
T ss_dssp             EEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEE
T ss_pred             EecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceE
Confidence            775322211111      1112224566666  44434446777778899999988643322 22223333344567889


Q ss_pred             EEEcCCCCEEEEeeCCCcEEEeeCCCCC---cceeecc--cCCCCceeEEEEC--CCC-CEEEEee-CCCcEEEEEcCC-
Q psy17188        401 VKLLPDGRTLIVGGEASNLSIWDLASPT---PRIKAEL--TSSAPACYALAIS--PDS-KVCFSCC-SDGNIAVWDLHN-  470 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~dg~i~iwd~~~~~---~~~~~~~--~~~~~~v~~l~~s--~~~-~~l~s~~-~dg~i~iwd~~~-  470 (504)
                      ++......+|+.+-++--|.-|+.+...   .......  ......|..|++-  .++ .||++.+ .+++..||+.+. 
T Consensus       213 CVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  213 CVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             EEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            9999888899999888888888876322   1122111  2233456666663  344 3555544 477899999875 


Q ss_pred             cceEEEE
Q psy17188        471 QTLVRQF  477 (504)
Q Consensus       471 ~~~~~~~  477 (504)
                      ...+..+
T Consensus       293 ~~~~g~f  299 (381)
T PF02333_consen  293 NAYVGSF  299 (381)
T ss_dssp             --EEEEE
T ss_pred             CcccceE
Confidence            3444444

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.45  E-value=1.6  Score=33.12  Aligned_cols=118  Identities=14%  Similarity=0.171  Sum_probs=67.6

Q ss_pred             EEcCCCcEEEEec-CCeEEEEeCCCCCCCC--ceeeeeecCCCCceEEEEEcc-----CCCEEEEecCCCcEEEEeCCCC
Q psy17188        120 TISNPTKYVYTGG-KGCVKVWDISQPGSKT--PVSQLDCLQRDNYIRSVKLLP-----DGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       120 ~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      .|.....-|+++. -+.|.|.+........  .-..+....-...|++++-.+     +...|+.|+ ...|..||+...
T Consensus         5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N   83 (136)
T PF14781_consen    5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENN   83 (136)
T ss_pred             EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccC
Confidence            4554455566555 8899999876432111  111222223455677775443     355677775 578999999877


Q ss_pred             CccceeeeecCcCceEEEEEC---CCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        192 TPRIKAELTSSAPACYALAIS---PDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      .......+.   +.|.++.+-   ....-|+..+.+..|.-+|.+-.+...+.
T Consensus        84 ~d~Fyke~~---DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV  133 (136)
T PF14781_consen   84 SDLFYKEVP---DGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV  133 (136)
T ss_pred             chhhhhhCc---cceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence            654444333   446666653   22233444445677888886665555543

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=94.40  E-value=4.6  Score=38.04  Aligned_cols=154  Identities=15%  Similarity=0.131  Sum_probs=80.9

Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      ....+..++++.+++++.....++-||--..  ............+..+.+.+++.  +++.+ ..|.+.. ....+...
T Consensus       240 sf~~v~~~~dG~~~~vg~~G~~~~s~d~G~~--~W~~~~~~~~~~l~~v~~~~dg~--l~l~g-~~G~l~~-S~d~G~~~  313 (398)
T PLN00033        240 TFSTVNRSPDGDYVAVSSRGNFYLTWEPGQP--YWQPHNRASARRIQNMGWRADGG--LWLLT-RGGGLYV-SKGTGLTE  313 (398)
T ss_pred             ceeeEEEcCCCCEEEEECCccEEEecCCCCc--ceEEecCCCccceeeeeEcCCCC--EEEEe-CCceEEE-ecCCCCcc
Confidence            3556677888888877755433333443211  11112222344678888988887  45444 4455433 22222111


Q ss_pred             C--cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCceeEEEECCCCCEEEEeeCC
Q psy17188        384 T--PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSD  460 (504)
Q Consensus       384 ~--~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~d  460 (504)
                      .  .+...........+..+.+.+++..+++| ..|.+.... ..++.-.... ...-....+.+.|.++++.+++| .+
T Consensus       314 ~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~  390 (398)
T PLN00033        314 EDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-ND  390 (398)
T ss_pred             cccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CC
Confidence            0  12221111123457889999888766665 677665553 3333211111 12223457788998877766655 67


Q ss_pred             CcEEEE
Q psy17188        461 GNIAVW  466 (504)
Q Consensus       461 g~i~iw  466 (504)
                      |.|.-|
T Consensus       391 G~il~~  396 (398)
T PLN00033        391 GVLLRY  396 (398)
T ss_pred             cEEEEe
Confidence            776554

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.35  E-value=2.2  Score=35.14  Aligned_cols=182  Identities=14%  Similarity=0.066  Sum_probs=95.6

Q ss_pred             CCcEEEEec---CCeEEEEeCCCCCCCCceeee--eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceee
Q psy17188        124 PTKYVYTGG---KGCVKVWDISQPGSKTPVSQL--DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  198 (504)
Q Consensus       124 ~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  198 (504)
                      +|.++.+.+   ...|++||+.+++.......-  ..++  ..|+.   ..|.-+.++ -.+|.-..+|.++.+..-...
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~Fg--EGit~---~gd~~y~LT-w~egvaf~~d~~t~~~lg~~~  128 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFG--EGITK---LGDYFYQLT-WKEGVAFKYDADTLEELGRFS  128 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccc--cceee---ccceEEEEE-eccceeEEEChHHhhhhcccc
Confidence            455666555   578999999876432221110  0001  11111   111112222 357778888887665444444


Q ss_pred             eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec----C-CCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        199 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----G-HTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~-h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ..+..   +.++  .|++.|..++...+++.-|.++.....++.    + .-..++.+.|- ||...+-.-.+..|...+
T Consensus       129 y~GeG---WgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~  202 (262)
T COG3823         129 YEGEG---WGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARID  202 (262)
T ss_pred             cCCcc---eeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEc
Confidence            44432   3443  355557766666677777766544333322    1 11223444443 566666666677788888


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVG  320 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~  320 (504)
                      ..+|++..|--...-...   .-....+.+..+.+++.|++. ++++|
T Consensus       203 p~sGrV~~widlS~L~~~---~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         203 PDSGRVVAWIDLSGLLKE---LNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             CCCCcEEEEEEccCCchh---cCccccccccccceeecCcCCeEEEec
Confidence            999988766332221110   111122355678999999874 44554

>KOG1983|consensus

Probab=94.27  E-value=1.9  Score=45.77  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=27.4

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  238 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~  238 (504)
                      ....++|+|...+++.+...|.|+++-...-+..
T Consensus        37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~   70 (993)
T KOG1983|consen   37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFV   70 (993)
T ss_pred             CCcceeeccccceEEEEEecccEEEecccceEEE
Confidence            3457899999999999999999999976544433

>KOG2247|consensus

Probab=94.24  E-value=0.014  Score=53.70  Aligned_cols=140  Identities=11%  Similarity=0.127  Sum_probs=91.4

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeec
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      ...|-+.+.-++.++.+..+..||-.. +.  .. -.........++|..++..++ .+-..+.+.+||+.+....+.-.
T Consensus        39 ~~~w~~e~~nlavaca~tiv~~YD~ag-q~--~l-e~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~  114 (615)
T KOG2247|consen   39 IHRWRPEGHNLAVACANTIVIYYDKAG-QV--IL-ELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES  114 (615)
T ss_pred             eeeEecCCCceehhhhhhHHHhhhhhc-ce--ec-ccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence            446777777788888888899998543 21  11 122334456788888777444 45567899999998653221111


Q ss_pred             C--CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        243 G--HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       243 ~--h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      +  |....  +.|++....++.+...|.+.+++..+.+.               ......|...+.++++.+.+..+. +
T Consensus       115 gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~---------------iiv~Gkh~RRgtq~av~lEd~vil-~  176 (615)
T KOG2247|consen  115 GGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRR---------------IIVMGKHQRRGTQIAVTLEDYVIL-C  176 (615)
T ss_pred             cCcchHHH--HhhccCCccccccccccceEEEeccchhh---------------hhhhcccccceeEEEecccceeee-c
Confidence            1  22222  67888888888888899999999877652               222233778899999998775444 3


Q ss_pred             eCCCc
Q psy17188        321 GEASN  325 (504)
Q Consensus       321 ~~dg~  325 (504)
                      +.|..
T Consensus       177 dcd~~  181 (615)
T KOG2247|consen  177 DCDNT  181 (615)
T ss_pred             CcHHH
Confidence            34433

>KOG3616|consensus

Probab=94.12  E-value=6.8  Score=38.97  Aligned_cols=75  Identities=16%  Similarity=0.332  Sum_probs=47.6

Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE-EcCCc
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW-DLHNQ  471 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw-d~~~~  471 (504)
                      .|.+.|.-+.....+..|..-...-.+.++|+.+........+      ++-+.|-|-...++.-+.|. +.|| ++.-.
T Consensus       335 nh~~~vdwielne~~~kllfrdkk~kl~l~di~s~qksmilnf------csymqwvp~sdvivaqn~dn-l~iwyn~d~p  407 (1636)
T KOG3616|consen  335 NHEGAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKSMILNF------CSYMQWVPGSDVIVAQNGDN-LCIWYNIDAP  407 (1636)
T ss_pred             cccccccceeccchhhhhhcccccceeEEEEcccchHHHHHHH------hhhheeccCcceEEecCCCc-eEEEecCCcc
Confidence            4566666666666666666666666788888886554333332      44568999888877776665 6666 45444


Q ss_pred             ceE
Q psy17188        472 TLV  474 (504)
Q Consensus       472 ~~~  474 (504)
                      +.+
T Consensus       408 eqv  410 (1636)
T KOG3616|consen  408 EQV  410 (1636)
T ss_pred             hhh
Confidence            443

>KOG2280|consensus

Probab=93.99  E-value=2.8  Score=41.58  Aligned_cols=170  Identities=9%  Similarity=0.117  Sum_probs=87.1

Q ss_pred             ccccceeee--cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        102 RHARQINTL--SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       102 ~~~~~~~~~--~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      ..++.+.++  .|. .+..+.|+.+..+|+..-+|++.||++-.... ... ..........|..+.|..+|-.+.+.  
T Consensus        71 ~sG~lL~~~~w~~~-~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~i-e~~-svg~e~~~~~I~ec~~f~~GVavlt~--  145 (829)
T KOG2280|consen   71 ISGQLLGRILWKHG-ELIGMGWSDDEELICVQKDGTVHVYGLLGEFI-ESN-SVGFESQMSDIVECRFFHNGVAVLTV--  145 (829)
T ss_pred             ccccchHHHHhcCC-CeeeecccCCceEEEEeccceEEEeecchhhh-ccc-ccccccccCceeEEEEecCceEEEec--
Confidence            344455444  344 78889999999999998899999999865321 111 11111223345556666566444443  


Q ss_pred             CCcEEEE-eCCCCCccceeeeecCcCceEEEEECCCCC---EEEEEe-CCCcEEEEECC--CCeEEEeecCCCCCeEEEE
Q psy17188        180 ASNLSIW-DLASPTPRIKAELTSSAPACYALAISPDSK---VCFSCC-SDGNIAVWDLH--NQTLVRQFQGHTDGASCID  252 (504)
Q Consensus       180 dg~i~iw-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~-~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~  252 (504)
                      +|++.+- +............+.....-.|-...+++.   .++-.. ..+ ..+....  +.+. ..+....+.+..+.
T Consensus       146 ~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~-~~~~~~~~~~~ki~  223 (829)
T KOG2280|consen  146 SGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQL-HALSWPNSSVVKIS  223 (829)
T ss_pred             CCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccc-cccCCCCceEEEEE
Confidence            4554443 333222111112222222212222222211   111111 111 1111111  1121 22222235678889


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCc
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGC  278 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~  278 (504)
                      .+|+.++|+--..+|.|.+-+.+..+
T Consensus       224 VS~n~~~laLyt~~G~i~~vs~D~~~  249 (829)
T KOG2280|consen  224 VSPNRRFLALYTETGKIWVVSIDLSQ  249 (829)
T ss_pred             EcCCcceEEEEecCCcEEEEecchhh
Confidence            99999999988899999888877654

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.99  E-value=0.31  Score=28.49  Aligned_cols=30  Identities=17%  Similarity=0.236  Sum_probs=25.3

Q ss_pred             ceEEEEECCCC---CEEEEEeCCCcEEEEECCC
Q psy17188        205 ACYALAISPDS---KVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       205 ~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~  234 (504)
                      .|.++.|+|+.   .+|+.+-..+.|.|+|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            58899999844   4888888889999999985

It contains a characteristic DLL sequence motif.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.71  E-value=3.6  Score=38.85  Aligned_cols=141  Identities=16%  Similarity=0.121  Sum_probs=78.5

Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC--------CEEEEeeCCCcEEE
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG--------RTLIVGGEASNLSI  421 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g--------~~l~~~~~dg~i~i  421 (504)
                      ..+-.+.+...+++..+.....+.-.|++.+.......      ....+ -+.|.|+.        +.| +|-.+..|.-
T Consensus       470 ~K~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW~------~~ddv-vVqy~p~~kf~qmt~eqtl-vGlS~~svFr  541 (776)
T COG5167         470 EKIMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEWD------LKDDV-VVQYNPYFKFQQMTDEQTL-VGLSDYSVFR  541 (776)
T ss_pred             hhceeecCCcceEEecCCCcccceeeecccceeeeEee------cCCcc-eeecCCchhHHhcCccceE-EeecccceEE
Confidence            33444444555566666666666666665543222111      11112 44555532        233 3444555555


Q ss_pred             eeCCC-CCcceeecccCCCCceeEEEEC----CCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEE
Q psy17188        422 WDLAS-PTPRIKAELTSSAPACYALAIS----PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  496 (504)
Q Consensus       422 wd~~~-~~~~~~~~~~~~~~~v~~l~~s----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l  496 (504)
                      .|.+- +..+........   ++.-.|+    ....++|+++..|.|++||--.-+.-..+++....|..+..+.+|+++
T Consensus       542 IDPR~~gNKi~v~esKdY---~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~i  618 (776)
T COG5167         542 IDPRARGNKIKVVESKDY---KTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHI  618 (776)
T ss_pred             ecccccCCceeeeeehhc---cccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEE
Confidence            55442 222222222111   1111222    345699999999999999965555555677778889999999999988


Q ss_pred             EEecC
Q psy17188        497 WTGGL  501 (504)
Q Consensus       497 ~s~s~  501 (504)
                      ++.+.
T Consensus       619 laTCk  623 (776)
T COG5167         619 LATCK  623 (776)
T ss_pred             EEeec
Confidence            76553

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=93.70  E-value=5.9  Score=36.80  Aligned_cols=40  Identities=20%  Similarity=0.249  Sum_probs=21.3

Q ss_pred             cEEEEEcCCcceE--EEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        462 NIAVWDLHNQTLV--RQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       462 ~i~iwd~~~~~~~--~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .+.+||.++.+-.  ..+.  ...-...+..-+++.++.||.+.
T Consensus       291 ~~e~yd~~~~~W~~~~~lp--~~~~~~~~~~~~~~iyv~GG~~~  332 (346)
T TIGR03547       291 SSEVYALDNGKWSKVGKLP--QGLAYGVSVSWNNGVLLIGGENS  332 (346)
T ss_pred             EeeEEEecCCcccccCCCC--CCceeeEEEEcCCEEEEEeccCC
Confidence            4567887655322  1121  11112233445788888888764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.59  E-value=0.44  Score=27.89  Aligned_cols=30  Identities=17%  Similarity=0.236  Sum_probs=25.2

Q ss_pred             ceeEEEECCCC---CEEEEeeCCCcEEEEEcCC
Q psy17188        441 ACYALAISPDS---KVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       441 ~v~~l~~s~~~---~~l~s~~~dg~i~iwd~~~  470 (504)
                      ++.++.|+|+.   .+|+.+-..|.|.|+|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            57899999854   4888888889999999985

It contains a characteristic DLL sequence motif.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=93.58  E-value=6.2  Score=36.65  Aligned_cols=53  Identities=15%  Similarity=0.211  Sum_probs=27.1

Q ss_pred             CCCEEEEEeCC-----------CcEEEEECCCCeEEEeecCCCCCeEEE-EE-ccCCCEEEEEcCC
Q psy17188        214 DSKVCFSCCSD-----------GNIAVWDLHNQTLVRQFQGHTDGASCI-DI-SADGTKLWTGGLD  266 (504)
Q Consensus       214 ~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~h~~~v~~~-~~-~~~~~~l~s~~~d  266 (504)
                      ++++.+.|+.+           ..+..||..+.+-...-.......... .. .-+++..+.|+.+
T Consensus        63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~  128 (346)
T TIGR03547        63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN  128 (346)
T ss_pred             CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence            56677777653           247788887765433211111111111 11 2367777777764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=93.45  E-value=11  Score=39.28  Aligned_cols=170  Identities=12%  Similarity=0.162  Sum_probs=103.0

Q ss_pred             cceeeecCCCcEEEEEEc---C----CCcEEEEecCCeEEEEeCCCCCC------C------Cceeeeeec-CCCCceEE
Q psy17188        105 RQINTLSHGEVVCAVTIS---N----PTKYVYTGGKGCVKVWDISQPGS------K------TPVSQLDCL-QRDNYIRS  164 (504)
Q Consensus       105 ~~~~~~~h~~~V~~v~~s---~----~~~~l~~~~d~~i~vw~~~~~~~------~------~~~~~~~~~-~~~~~v~~  164 (504)
                      .....+.-..+|..|.|.   .    ..++|++=....+.|+...-...      .      .++..+... -.......
T Consensus        71 ~~~w~i~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aD  150 (765)
T PF10214_consen   71 SGAWSIDDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHAD  150 (765)
T ss_pred             cceeEcCCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccce
Confidence            333444667899999998   2    33588877788888888221111      1      112222111 12346779


Q ss_pred             EEEcc-CCCEEEEecCCCcEEEEeCCCCCccc--ee-ee---ecC-------cCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        165 VKLLP-DGRTLIVGGEASNLSIWDLASPTPRI--KA-EL---TSS-------APACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       165 ~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~--~~-~~---~~~-------~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      ++|+| +.+.||.....|.-.||++.......  .. ..   .++       ...-..+.|.++-+.|+.++. ..+.++
T Consensus       151 v~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~~l~~~  229 (765)
T PF10214_consen  151 VAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-SKLMLI  229 (765)
T ss_pred             EEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-CceEEE
Confidence            99999 66789999999999999992211110  00 00   111       122347889888777777754 579999


Q ss_pred             ECCCCeEEE-e-ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCC
Q psy17188        231 DLHNQTLVR-Q-FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       231 d~~~~~~~~-~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~  276 (504)
                      |+++..... . .......|..+.-+++. .+++.- ....|...++..
T Consensus       230 d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~  277 (765)
T PF10214_consen  230 DFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS  277 (765)
T ss_pred             ECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence            999876533 1 22255678888888862 222222 235677777776

These proteins are found in fungi.

>KOG4460|consensus

Probab=93.39  E-value=5.3  Score=37.95  Aligned_cols=68  Identities=21%  Similarity=0.159  Sum_probs=39.8

Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCC---Cccc----ceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKT---PVSQ----LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                      +.+-.| .+..||-+...+.+.+...+....   ....    .....-.-.|..+..++.|..++..+.+|.+..+
T Consensus        56 ~~~~gD-~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~l~P~~~V~feV~~vl~s~~GS~VaL~G~~Gi~vMe  130 (741)
T KOG4460|consen   56 VFGLGD-ELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQRLLPINPVLFEVYQVLLSPTGSHVALIGIKGLMVME  130 (741)
T ss_pred             hcccCC-EEEEEecCcceEEEEEeccCCCCcccccccccceeccCCcceEEEEEEEecCCCceEEEecCCeeEEEE
Confidence            334444 788888877766655554221111   1111    1111223457788899999999998888865544

>PRK13613 lipoprotein LpqB; Provisional

Probab=93.23  E-value=10  Score=38.01  Aligned_cols=199  Identities=15%  Similarity=0.125  Sum_probs=97.0

Q ss_pred             CeEEEEEccCCCEEEEEcCCC-eEEEEECCCCce-EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--
Q psy17188        247 GASCIDISADGTKLWTGGLDN-TVRSWDLREGCV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--  322 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s~~~dg-~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--  322 (504)
                      .+.+.+.++++..++....++ .+++..+..+.. ..             ..........++.-.|.+++ .+.+...  
T Consensus       364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~-------------~~~~~~~~~~Lt~PS~d~~g-~vWtvd~~~  429 (599)
T PRK13613        364 PLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGV-------------HSWGVTADGRLTSPSWDGRG-DLWVVDRDP  429 (599)
T ss_pred             CccceEEcCCCceEEEEcCCCcEEEEeccCCCCcccc-------------ccceeeccCcccCCcCcCCC-CEEEecCCC
Confidence            677889999998888777665 455544432221 00             00000112224444555555 3333311  


Q ss_pred             CCc--EEEEeCCCCCccceeeeccCC-CceeeEEECCCCCCceeeeccC-CCeEEEEecCCCCCC-Cccccc-ccccCCC
Q psy17188        323 ASN--LSIWDLASPTPRIKAELTSSA-PACYALAISPDSKSPFFSSHHY-KSCVKVWDISQPGSK-TPVSQL-DCLQRDN  396 (504)
Q Consensus       323 dg~--i~v~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~~~~-~~~~~~-~~~~~~~  396 (504)
                      ++.  +++..- .++.... ...... ..|..+.+++||-+..++.... .+.|.+--+...... ..+... .......
T Consensus       430 ~~~~vl~v~~~-~G~~~~V-~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~  507 (599)
T PRK13613        430 ADPRLLWLLQG-DGEPVEV-RTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELE  507 (599)
T ss_pred             CCceEEEEEcC-CCcEEEe-eccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCC
Confidence            111  333332 2222111 111222 3799999999999876666432 355555544332111 112211 1112233


Q ss_pred             ceEEEEEcCCCCEEEEeeC-CCc--EEEeeCCCCCcceeecccCCCCceeEEEECCCCC-EEEEeeCCCcE
Q psy17188        397 YIRSVKLLPDGRTLIVGGE-ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNI  463 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~dg~i  463 (504)
                      .+.+++|..++.+++.+.. .+.  +++.++.....  ..........+..++-..+.+ .++.+..++.|
T Consensus       508 ~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~~--~~~~~~~v~~~~~ia~~~~~~~~~v~~~~~~~v  576 (599)
T PRK13613        508 DVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGSTP--PASAPAAVTGVESITASEDERLPLVAGTSEDGI  576 (599)
T ss_pred             ccceeEEcCCCEEEEEeccCCCCcceEEEecCCcCc--ccccccCCCCeeEEEecCCCCceEEEEecCCCe
Confidence            4889999999988775633 323  44444443221  111222334456667766666 44443455544

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=93.23  E-value=9.3  Score=37.68  Aligned_cols=257  Identities=13%  Similarity=0.149  Sum_probs=115.0

Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCe---EEEeecCC-CCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        212 SPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQGH-TDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       212 s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h-~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      ..++..++.+.++|.+....+....   .+..+. . .....++.+..++ .+|+.|+.-|.=.++.+....+.      
T Consensus       219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g-~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~------  291 (504)
T PF10433_consen  219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLG-TLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLE------  291 (504)
T ss_dssp             STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEE-E--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEE------
T ss_pred             cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcC-CcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcE------
Confidence            4466788889999999988876544   122222 2 4455677776654 36777776554333333333332      


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCC----CC------EEEEEe---CCCcEEEEeCCCCCccceeeeccC--CCceee
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPD----GR------TLIVGG---EASNLSIWDLASPTPRIKAELTSS--APACYA  351 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~------~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~--~~~i~~  351 (504)
                              .+.....-+++..+++.+.    ..      .|++++   .+|.+++..-.-+-.........-  ...+..
T Consensus       292 --------~~~~~~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~  363 (504)
T PF10433_consen  292 --------VLDSLPNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWT  363 (504)
T ss_dssp             --------EEEEE----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEE
T ss_pred             --------EEEeccCcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEE
Confidence                    3333445566777777431    11      555553   456777764321100001111111  223344


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCC---CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQ---PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                      +....+. ..+++... ...-+++.+..   .+................+.+-.+.  +..++=... ..|++.+....+
T Consensus       364 l~~~~~~-~~~lv~S~-~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~-~~i~l~~~~~~~  438 (504)
T PF10433_consen  364 LKLSSSD-HSYLVLSF-PNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTP-KGIRLIDLEDGK  438 (504)
T ss_dssp             E-SSSSS-BSEEEEEE-SSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEES-SEEEEEESSSTS
T ss_pred             eeecCCC-ceEEEEEc-CCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEec-CeEEEEECCCCe
Confidence            4433322 22333333 34455565542   1110000000111112222222222  233333333 348888876554


Q ss_pred             cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-----ecCCceEEEEEcc
Q psy17188        429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-----GHTDGASCIDISA  491 (504)
Q Consensus       429 ~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~s~  491 (504)
                      ........ ....|.+.+..  +.+++.+..++.+..++++.........     .....|.|+...|
T Consensus       439 ~~~~w~~~-~~~~I~~a~~~--~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p  503 (504)
T PF10433_consen  439 LTQEWKPP-AGSIIVAASIN--DPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP  503 (504)
T ss_dssp             EEEEEE-T-TS---SEEEES--SSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred             EEEEEeCC-CCCeEEEEEEC--CCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence            44333333 33345555553  4677777778899999998776643332     1467788888766

...

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.11  E-value=0.86  Score=38.81  Aligned_cols=67  Identities=16%  Similarity=0.313  Sum_probs=51.4

Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCeEEEee-------c-------CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC
Q psy17188        211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-------Q-------GHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       211 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~  276 (504)
                      +..++++|++.+.+|.+++||+.+++.+..-       .       .....|..+.++.+|.-|++-+ +|..+.|+.+-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            3447778999999999999999998765432       1       3556788888998887777665 57889998876


Q ss_pred             Cc
Q psy17188        277 GC  278 (504)
Q Consensus       277 ~~  278 (504)
                      +.
T Consensus        97 ~~   98 (219)
T PF07569_consen   97 GC   98 (219)
T ss_pred             ce
Confidence            54

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.03  E-value=0.8  Score=39.02  Aligned_cols=69  Identities=16%  Similarity=0.235  Sum_probs=50.7

Q ss_pred             EEcCCCCEEEEeeCCCcEEEeeCCCCCcceee----c-cc-------CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        402 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKA----E-LT-------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~----~-~~-------~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .+..++.+|++.+.+|.+++||+.+.+.....    . +.       .....|..+.++.+|.-|++-+ +|..+.|+.+
T Consensus        17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~   95 (219)
T PF07569_consen   17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD   95 (219)
T ss_pred             EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence            34557889999999999999999986543322    1 11       3556788899998998877664 5788999865


Q ss_pred             Cc
Q psy17188        470 NQ  471 (504)
Q Consensus       470 ~~  471 (504)
                      -+
T Consensus        96 L~   97 (219)
T PF07569_consen   96 LG   97 (219)
T ss_pred             cc
Confidence            44

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=92.91  E-value=5.1  Score=34.62  Aligned_cols=125  Identities=20%  Similarity=0.382  Sum_probs=70.5

Q ss_pred             EEcCCCcEEEEec--C--CeEEEEeCCC-CCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC-cEEEEeCCCCCc
Q psy17188        120 TISNPTKYVYTGG--K--GCVKVWDISQ-PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTP  193 (504)
Q Consensus       120 ~~s~~~~~l~~~~--d--~~i~vw~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~  193 (504)
                      ++.+||++|.+|+  +  ..+++++... .................+--.....+||+.|+.|+... +..+|.-.....
T Consensus        73 ~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~  152 (243)
T PF07250_consen   73 AFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPGP  152 (243)
T ss_pred             CCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccCCC
Confidence            4668999999998  3  4588888654 11111111111123445555666778999999988764 344554322111


Q ss_pred             -cceeeeec------CcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCC
Q psy17188        194 -RIKAELTS------SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  246 (504)
Q Consensus       194 -~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~  246 (504)
                       .....+..      ...-=--+...|+|++++.+..+  -.|||..+.+.++.+..-.+
T Consensus       153 ~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~lP~lPg  210 (243)
T PF07250_consen  153 GPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRTLPDLPG  210 (243)
T ss_pred             CceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEeeCCCCCC
Confidence             01110110      01111245668899998888764  46679888887777765443

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=92.83  E-value=6.5  Score=34.77  Aligned_cols=205  Identities=15%  Similarity=0.151  Sum_probs=108.9

Q ss_pred             EEEEEcCCCcEEEEec-CCeEEEEeCCCC---CCCCcee-eeee---cCCCCceEEEEEccCCCE------------EEE
Q psy17188        117 CAVTISNPTKYVYTGG-KGCVKVWDISQP---GSKTPVS-QLDC---LQRDNYIRSVKLLPDGRT------------LIV  176 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~-d~~i~vw~~~~~---~~~~~~~-~~~~---~~~~~~v~~~~~s~~~~~------------l~~  176 (504)
                      ..|+++|.+.+-++.. -+...+||....   ....++. .+..   .......+.+.|+....+            ++.
T Consensus        26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif  105 (336)
T TIGR03118        26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF  105 (336)
T ss_pred             ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence            5689999887777766 789999998621   1111221 1110   012356778888754332            566


Q ss_pred             ecCCCcEEEEeCCCCCc---cceeeee-cCcCce-EEEEECC--CCCEEEEEe-CCCcEEEEECCCCeEE--EeecCC--
Q psy17188        177 GGEASNLSIWDLASPTP---RIKAELT-SSAPAC-YALAISP--DSKVCFSCC-SDGNIAVWDLHNQTLV--RQFQGH--  244 (504)
Q Consensus       177 ~~~dg~i~iw~~~~~~~---~~~~~~~-~~~~~v-~~~~~s~--~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~h--  244 (504)
                      +++||+|.-|...-...   .....+. .....| ..+++..  .+.+|+.+. .+++|.++|-.=.+..  ..+...  
T Consensus       106 ~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~i  185 (336)
T TIGR03118       106 VTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPAL  185 (336)
T ss_pred             EeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCCC
Confidence            78999999998643322   1112222 112333 3445443  345555553 5788999984322211  001100  


Q ss_pred             ---CC--Ce---------EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        245 ---TD--GA---------SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       245 ---~~--~v---------~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                         -.  .|         +-..-.++.+.=+.+..-|.|-++|+...-++              .+.....-...+.|+.
T Consensus       186 PagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~--------------r~as~g~LNaPWG~a~  251 (336)
T TIGR03118       186 PAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLR--------------RVASSGRLNAPWGLAI  251 (336)
T ss_pred             CCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEE--------------EeccCCcccCCceeee
Confidence               00  01         11111122222223334468888888765433              2222233344566776


Q ss_pred             cC------CCCEEEEEeCCCcEEEEeCCCCC
Q psy17188        311 LP------DGRTLIVGGEASNLSIWDLASPT  335 (504)
Q Consensus       311 ~~------~~~~l~~~~~dg~i~v~d~~~~~  335 (504)
                      .|      .+.+|+---.||+|..||..+++
T Consensus       252 APa~FG~~sg~lLVGNFGDG~InaFD~~sG~  282 (336)
T TIGR03118       252 APESFGSLSGALLVGNFGDGTINAYDPQSGA  282 (336)
T ss_pred             ChhhhCCCCCCeEEeecCCceeEEecCCCCc
Confidence            55      46667766779999999988764

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.15  E-value=0.83  Score=45.55  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=44.1

Q ss_pred             CCCCEEEEeeCCCcEEEeeCCC---CCcceeec-c--------------------cCCCCceeEEEECC----CCCEEEE
Q psy17188        405 PDGRTLIVGGEASNLSIWDLAS---PTPRIKAE-L--------------------TSSAPACYALAISP----DSKVCFS  456 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~~---~~~~~~~~-~--------------------~~~~~~v~~l~~s~----~~~~l~s  456 (504)
                      ++...++++..||.+.......   ........ .                    .........++++.    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4566788888888877776653   11111000 0                    01123345566666    7889999


Q ss_pred             eeCCCcEEEEEcCCcceEEEE
Q psy17188        457 CCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       457 ~~~dg~i~iwd~~~~~~~~~~  477 (504)
                      .+.|+.+|+||+.+++++.+.
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEe
Confidence            999999999999999996655

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=92.01  E-value=17  Score=37.78  Aligned_cols=83  Identities=11%  Similarity=-0.091  Sum_probs=51.1

Q ss_pred             CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce----ecccCCceEEEEEcCCCCEEEEE
Q psy17188        245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD----CLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      .+.|.+++...-+..++..-.||+|.++|..+-+..............+....    .......+..++|||.+..++.-
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~  338 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI  338 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence            35677777777777899999999999999887643221100000000000110    01112245678999999999999


Q ss_pred             eCCCcEE
Q psy17188        321 GEASNLS  327 (504)
Q Consensus       321 ~~dg~i~  327 (504)
                      ..+|.+.
T Consensus       339 ~~~~~~~  345 (753)
T PF11635_consen  339 DEDGKTK  345 (753)
T ss_pred             ecCCCce
Confidence            8988865

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=91.86  E-value=1.1  Score=26.09  Aligned_cols=40  Identities=10%  Similarity=0.178  Sum_probs=28.8

Q ss_pred             CCCCEEEEee-CCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188        449 PDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDI  489 (504)
Q Consensus       449 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  489 (504)
                      |++++|+++. .++.|.++|..+++.+..+.. ......+.|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence            5777777655 478999999999998888775 333445554

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=91.73  E-value=3  Score=41.61  Aligned_cols=97  Identities=9%  Similarity=0.080  Sum_probs=55.2

Q ss_pred             CceEEEEEccCCCEEEEecCCCc-----EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASN-----LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +.-..++|-|.|..+++-+.||.     |..+.-+.-+.-....-.+....+..++|+-....++.+ ..+.+.+|-..+
T Consensus       247 g~e~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkN  325 (1243)
T COG5290         247 GMEHQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKN  325 (1243)
T ss_pred             cchhccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccc
Confidence            33445899999999999765442     555543321100000111223345667787666555544 456899998766


Q ss_pred             CeEEEeecCCCCCeEEEEEccCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      -..--.....-..+.-+.|+|..
T Consensus       326 yhWYLK~e~~ip~~s~vkwhpe~  348 (1243)
T COG5290         326 YHWYLKVERQIPGISYVKWHPEE  348 (1243)
T ss_pred             eEEEEEEeecCCCcceeeecccc
Confidence            54333333344567778999953

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=91.45  E-value=16  Score=36.15  Aligned_cols=353  Identities=11%  Similarity=0.128  Sum_probs=145.0

Q ss_pred             EEEEEEcCCCcEEEEec-CCeEEEEeCCC----CCCCCceeeeeecCCCCceEEEEEcc-----CCCEEEEe--cCC--C
Q psy17188        116 VCAVTISNPTKYVYTGG-KGCVKVWDISQ----PGSKTPVSQLDCLQRDNYIRSVKLLP-----DGRTLIVG--GEA--S  181 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~-d~~i~vw~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~--~~d--g  181 (504)
                      -.-++..|.++.++.+. ++.+.|+.++.    ............ .....|.+++|..     +...++.-  ...  .
T Consensus        46 G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi-~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~~  124 (504)
T PF10433_consen   46 GQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPI-KSEGNILDMCFLHPSVGYDNPTLAILYVDSQRRT  124 (504)
T ss_dssp             --EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE---S-SEEEEEEEES---S-SS-EEEEEEEETT-EE
T ss_pred             CcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccc-cCCceEEEEEEEecccCCCCceEEEEEEEecccc
Confidence            35688899999999887 99999999877    111111110111 2367789999985     33344432  222  2


Q ss_pred             cEEEEe--CCCCCc----cceee--e-ecCcCceEEEEECCCCCEEEEEeCCCcEEEEE-CCCC---eEEEeecC----C
Q psy17188        182 NLSIWD--LASPTP----RIKAE--L-TSSAPACYALAISPDSKVCFSCCSDGNIAVWD-LHNQ---TLVRQFQG----H  244 (504)
Q Consensus       182 ~i~iw~--~~~~~~----~~~~~--~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd-~~~~---~~~~~~~~----h  244 (504)
                      .+..++  ...+-.    +....  + ..+..+..-+..-.....+++++. + +.+|. ....   .....+..    .
T Consensus       125 ~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIPlp~~~ggllV~~~-~-~i~y~~~~~~~~~~~~~~~~~~~~~~  202 (504)
T PF10433_consen  125 HLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIPLPNPPGGLLVGGE-N-IIIYKNHLIGSGDYSFLSIPSPPSSS  202 (504)
T ss_dssp             EEEEEE--------EETTTTEEEE--EEEE-TTEEEEEE-TTT-SEEEEES-S-EEEEEE------TTEEEEE--H-HHH
T ss_pred             eeEEEeeecccccceeeeeccccccccccCCCccEEEEcCCCCcEEEEECC-E-EEEEecccccccccccccccCCccCC
Confidence            244444  332110    00111  1 011112222222222223444433 2 33443 2111   11112211    1


Q ss_pred             CCCeEEEEE-------ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc-CCceEEEEEcCCC-C
Q psy17188        245 TDGASCIDI-------SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDG-R  315 (504)
Q Consensus       245 ~~~v~~~~~-------~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-~  315 (504)
                      ..-+.+..+       ..++..++.+..+|.+....+...... .            ....... .....++.+..+| .
T Consensus       203 ~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~-i------------~i~~~g~~~~~~s~l~~l~~g~d  269 (504)
T PF10433_consen  203 SSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGS-I------------SITYLGTLCSIASSLTYLKNGGD  269 (504)
T ss_dssp             TS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEE-E------------EEEEEEE--S-ESEEEEESTT--
T ss_pred             CceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCe-E------------EEEEcCCcCChhheEEEEcCCCE
Confidence            222333332       345678888999999988877653310 0            1111222 3345566666554 4


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC---CCC------ceeeec--cCCCeEEEEecCCCCCCC
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKS------PFFSSH--HYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~------~~~~~~--~~~~~i~i~d~~~~~~~~  384 (504)
                      +|++|+..|.=.++.+..........+. .-+++..+++.+.   +..      .+++++  +.+|.+++..-.-+....
T Consensus       270 ~lf~gs~~gds~l~~~~~~~l~~~~~~~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~  348 (504)
T PF10433_consen  270 YLFVGSEFGDSQLLQISLSNLEVLDSLP-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGL  348 (504)
T ss_dssp             EEEEEESSS-EEEEEEESESEEEEEEE-----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--
T ss_pred             EEEEEEecCCcEEEEEeCCCcEEEEecc-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceee
Confidence            7888877666555555443333333333 3347777777532   111      234433  346777777532211100


Q ss_pred             cccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCC---CCCcceee---cccCCCCceeEEEECCCCCEEEEe
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLA---SPTPRIKA---ELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~---~~~~~~~~---~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      ...... ...-..++.+.... ++.+|+.+..+. -+++.+.   ..+.....   .+......+.+-.+.  +..++=.
T Consensus       349 ~~~~~~-l~~v~~iW~l~~~~~~~~~lv~S~~~~-T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQV  424 (504)
T PF10433_consen  349 ELASSE-LPGVTGIWTLKLSSSDHSYLVLSFPNE-TRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQV  424 (504)
T ss_dssp             EEEEEE-ESTEEEEEEE-SSSSSBSEEEEEESSE-EEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEE
T ss_pred             eeeccC-CCCceEEEEeeecCCCceEEEEEcCCc-eEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEE
Confidence            111111 11112233333322 245777766554 3455553   12211111   222223333333333  4444444


Q ss_pred             eCCCcEEEEEcCCcceEEEEeec-CCceEEEEEc
Q psy17188        458 CSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDIS  490 (504)
Q Consensus       458 ~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~s  490 (504)
                      ...+ |++.+..+++....+... ...|.+.+..
T Consensus       425 t~~~-i~l~~~~~~~~~~~w~~~~~~~I~~a~~~  457 (504)
T PF10433_consen  425 TPKG-IRLIDLEDGKLTQEWKPPAGSIIVAASIN  457 (504)
T ss_dssp             ESSE-EEEEESSSTSEEEEEE-TTS---SEEEES
T ss_pred             ecCe-EEEEECCCCeEEEEEeCCCCCeEEEEEEC
Confidence            4443 888888777777666433 2345555444

...

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=91.05  E-value=13  Score=34.51  Aligned_cols=192  Identities=14%  Similarity=0.186  Sum_probs=106.4

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE----CCCCCE--EEEEe-CC---CcEEEEECC--CCeE
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI----SPDSKV--CFSCC-SD---GNIAVWDLH--NQTL  237 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~----s~~~~~--l~~~~-~d---g~i~iwd~~--~~~~  237 (504)
                      ...+++....++-+.+||++....   ..+.  .+..+.+..    .-+++.  |+.++ .+   .+|++|.+.  ++.+
T Consensus        67 ~kSlIigTdK~~GL~VYdL~Gk~l---q~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   67 AKSLIIGTDKKGGLYVYDLDGKEL---QSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GG-EEEEEETTTEEEEEETTS-EE---EEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             ccceEEEEeCCCCEEEEcCCCcEE---Eeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            455777777888899999986432   2222  122222222    113332  44444 32   469999775  4443


Q ss_pred             EEeecC-------CCCCeEEEEEc--c-CCC-EEEEEcCCCeEEEEECC---CCceEEEeecCCCCCCCcccceecccCC
Q psy17188        238 VRQFQG-------HTDGASCIDIS--A-DGT-KLWTGGLDNTVRSWDLR---EGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       238 ~~~~~~-------h~~~v~~~~~~--~-~~~-~l~s~~~dg~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                       ..+..       -...+..+|+.  + +|. +++....+|.+..|.+.   .+.+.-            ..........
T Consensus       142 -~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~------------~lVR~f~~~s  208 (381)
T PF02333_consen  142 -TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSA------------TLVREFKVGS  208 (381)
T ss_dssp             -EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEE------------EEEEEEE-SS
T ss_pred             -eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEee------------EEEEEecCCC
Confidence             33221       12346777764  3 344 55667788888777664   222210            1233334456


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc---ceeee--ccCCCceeeEEEC--CCCCCceeeeccCCCeEEEEe
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR---IKAEL--TSSAPACYALAIS--PDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~--~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      .+..+.......+|+.+-++.-|..|+.+.....   .....  ......+..+++.  .+++..++++.-.++...+|+
T Consensus       209 Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~  288 (381)
T PF02333_consen  209 QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYD  288 (381)
T ss_dssp             -EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEE
T ss_pred             cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEe
Confidence            7889999998889999999887888877643221   11111  1234577778775  455555777777888999999


Q ss_pred             cCC
Q psy17188        377 ISQ  379 (504)
Q Consensus       377 ~~~  379 (504)
                      .+.
T Consensus       289 r~~  291 (381)
T PF02333_consen  289 REG  291 (381)
T ss_dssp             SST
T ss_pred             cCC
Confidence            764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=91.02  E-value=4.2  Score=33.93  Aligned_cols=114  Identities=24%  Similarity=0.260  Sum_probs=67.3

Q ss_pred             CEEEEEeCCCcEEEEECC--CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC------eEEEE-ECCCC-----ceEE
Q psy17188        216 KVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN------TVRSW-DLREG-----CVKV  281 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg------~i~~w-d~~~~-----~~~~  281 (504)
                      +.|+.+...+.|.+|++.  ..+...+|. --+.|..+.++..|++|+|--.+.      .+|+| +.+..     .+.+
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            455555667789999988  446667776 458899999999999999875432      45654 22211     1111


Q ss_pred             EeecC-----CC---CCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17188        282 WDISQ-----PG---SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       282 ~~~~~-----~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~  333 (504)
                       .+..     +.   .......+ .......+.+++-.|-...|++|+. +.+.+|.+..
T Consensus       108 -RiaG~~v~~~~~~~~~~qleii-ElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~  164 (215)
T PF14761_consen  108 -RIAGHRVTPSFNESSKDQLEII-ELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKY  164 (215)
T ss_pred             -EEcccccccCCCCccccceEEE-EecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEE
Confidence             1111     00   01111111 2233566788888885444666654 5788887654

>KOG1916|consensus

Probab=91.02  E-value=0.28  Score=49.04  Aligned_cols=135  Identities=13%  Similarity=0.117  Sum_probs=76.1

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCcccee--ee---ecCcCce
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKA--EL---TSSAPAC  206 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~---~~~~~~v  206 (504)
                      .+-+++-+..+.-.    ..--..+..+.|-.+.|.. +...++  -.-|.+.+|+++--+.....  .+   ......+
T Consensus       110 ~~~vrvaN~~~sm~----~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~  183 (1283)
T KOG1916|consen  110 ENGVRVANQEPSMR----HNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDP  183 (1283)
T ss_pred             hhhhhhccCcchhH----HHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCc
Confidence            56677777654311    0011125567777888754 222222  34477899988643222111  11   1122233


Q ss_pred             EEEEECC---CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEE-----------ccCCCEEEEEcCCCeEEEE
Q psy17188        207 YALAISP---DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI-----------SADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       207 ~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-----------~~~~~~l~s~~~dg~i~~w  272 (504)
                      .-+.|.|   +..++..+-.++.|++.++.+... ..+++|...+..++|           +|||..++.++.||.++.|
T Consensus       184 ~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~  262 (1283)
T KOG1916|consen  184 QLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY  262 (1283)
T ss_pred             ceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence            4455554   666788888889998887765433 556668877777654           5566666666666655555


Q ss_pred             EC
Q psy17188        273 DL  274 (504)
Q Consensus       273 d~  274 (504)
                      .+
T Consensus       263 Qi  264 (1283)
T KOG1916|consen  263 QI  264 (1283)
T ss_pred             ee
Confidence            43

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=90.90  E-value=12  Score=33.67  Aligned_cols=185  Identities=17%  Similarity=0.235  Sum_probs=97.1

Q ss_pred             cEEEEECCCCeEEEeecC------CCCCeEEEEEccCC-----CE-EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188        226 NIAVWDLHNQTLVRQFQG------HTDGASCIDISADG-----TK-LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV  293 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~-----~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~  293 (504)
                      .|.+||+.+++.++++.-      ..+.+..+.+....     .+ .++=+..+-|.++|+.+++...............
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~  114 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA  114 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred             EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence            578889999888777643      24556777776522     23 3344445689999999987543322211111100


Q ss_pred             ccc----eecccCCceEEEEEcC---CCCEEEEEeCCCcEEEEeCC-----CCCccc-------eeeeccCCCceeeEEE
Q psy17188        294 SQL----DCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLA-----SPTPRI-------KAELTSSAPACYALAI  354 (504)
Q Consensus       294 ~~~----~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~v~d~~-----~~~~~~-------~~~~~~~~~~i~~~~~  354 (504)
                      ..+    ........+..++.+|   +++.|+...-.+. ++|.+.     ......       ...+.........+++
T Consensus       115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~  193 (287)
T PF03022_consen  115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAI  193 (287)
T ss_dssp             EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEE
T ss_pred             cceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCccccccccccccceeccccCCCCceEEE
Confidence            011    1122334477888876   7778887765442 233322     111111       1111112246677888


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC-CCceEEEEEcC--CCCEEEEe
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLP--DGRTLIVG  413 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~--~g~~l~~~  413 (504)
                      .++|.  ++.+--..+.|..|+....-.......+..... -..+..+.+.+  +|.+.+..
T Consensus       194 D~~G~--ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  194 DPNGN--LYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             ETTTE--EEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             CCCCc--EEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence            88777  888888899999999876433333332222222 34567788877  66554443

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=90.85  E-value=21  Score=36.64  Aligned_cols=93  Identities=17%  Similarity=0.312  Sum_probs=57.1

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      .|..+.++|+|++|+..+..| |.|-.+... .....+.+-...|.|-.+.-+..++ .                     
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~-~---------------------  142 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFF-T---------------------  142 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhc-c---------------------
Confidence            488899999999999888754 555555321 1112233333344433332222111 1                     


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCC
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPT  335 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~  335 (504)
                                     ......|..+.|+|.   +..|++-+.|+.+++||+....
T Consensus       143 ---------------~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  143 ---------------SNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             ---------------CCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence                           122344778899985   5789999999999999997543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=90.74  E-value=23  Score=36.88  Aligned_cols=70  Identities=11%  Similarity=0.036  Sum_probs=50.3

Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee----ccc-------------CCCCceeEEEECCCCCEEEEe
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA----ELT-------------SSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~-------------~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      ...|.++....-+..++....||+|.++|..+.+.....    ...             .....+..++|||.+..++.-
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~  338 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI  338 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence            456778888888889999999999999998776433322    100             001123457899999999999


Q ss_pred             eCCCcEE
Q psy17188        458 CSDGNIA  464 (504)
Q Consensus       458 ~~dg~i~  464 (504)
                      ..+|.+.
T Consensus       339 ~~~~~~~  345 (753)
T PF11635_consen  339 DEDGKTK  345 (753)
T ss_pred             ecCCCce
Confidence            9998865

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=90.73  E-value=17  Score=35.25  Aligned_cols=324  Identities=13%  Similarity=0.081  Sum_probs=139.8

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee--cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT  148 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~  148 (504)
                      ..+|..+.+..+|.+  +...++.++.++.. +.+.++.-  ..+.+|.++..+-.+++.+ |+|.-|.+.+.+..    
T Consensus       164 d~~V~aLv~D~~g~l--WvgT~dGL~~fd~~-~gkalql~s~~~dk~I~al~~d~qg~LWV-GTdqGv~~~e~~G~----  235 (671)
T COG3292         164 DTPVVALVFDANGRL--WVGTPDGLSYFDAG-RGKALQLASPPLDKAINALIADVQGRLWV-GTDQGVYLQEAEGW----  235 (671)
T ss_pred             CccceeeeeeccCcE--EEecCCcceEEccc-cceEEEcCCCcchhhHHHHHHHhcCcEEE-EeccceEEEchhhc----
Confidence            457778887777732  23334444433321 22222222  3346777777776676555 44555666665541    


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc-ceeeeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-IKAELTSSAPACYALAISPDSKVCFSCCSDGNI  227 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  227 (504)
                      ........-..+.|..+.-..+|. +-.|+++|..+ ......... ...........|..+....+|. |-+++.++.+
T Consensus       236 ~~sn~~~~lp~~~I~ll~qD~qG~-lWiGTenGl~r-~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv  312 (671)
T COG3292         236 RASNWGPMLPSGNILLLVQDAQGE-LWIGTENGLWR-TRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIV  312 (671)
T ss_pred             cccccCCCCcchheeeeecccCCC-EEEeeccccee-EecCCCCccccccccCCccccccceeeccCCC-EeeeccCceE
Confidence            111111111233444444333443 44555554332 233322211 1111111223355666666665 4556566655


Q ss_pred             EEEECCCCeEEEeecCCCCCe-EEEEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        228 AVWDLHNQTLVRQFQGHTDGA-SCIDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~~h~~~v-~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      ++-+- .......+....+.+ ...+..|  .+..+--...-|.+.+-+-.+|....             . ........
T Consensus       313 ~~~~a-~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~-------------s-v~q~Rg~n  377 (671)
T COG3292         313 RYLTA-DWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVR-------------S-VHQLRGMN  377 (671)
T ss_pred             EEecc-hhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEE-------------E-eeeccccc
Confidence            54332 222222222111111 1111111  11111112222333344444443211             0 11112234


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      |+.+++..+++ +-.++...-+..|+.++.-......-....+.+..+--.|+++   +..++.+|.++. +.+......
T Consensus       378 it~~~~d~~g~-lWlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns---LWIGTs~Glvk~-~pe~~~v~n  452 (671)
T COG3292         378 ITTTLEDSRGR-LWLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS---LWIGTSGGLVKR-DPESGRVLN  452 (671)
T ss_pred             cchhhhccCCc-EEEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC---EEEeccCCeEec-Cccccchhc
Confidence            56666666444 5566665445666655521111111222344667777777776   666666766553 211111111


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      ....-........+..+.+.|+|++-+. ..+| |..|+.+..
T Consensus       453 ~ln~~~~~l~~s~~~~lg~~~~g~Lw~a-~g~g-va~~~sq~~  493 (671)
T COG3292         453 LLNPGSHGLDGSRVEQLGLGPDGRLWLA-AGSG-VAAWESQRR  493 (671)
T ss_pred             ccccccCcCCcchhhhhccCCCCceEEE-ecce-eeeeccccc
Confidence            1111111223445778889999885333 2334 677776543

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=90.62  E-value=17  Score=34.97  Aligned_cols=31  Identities=26%  Similarity=0.425  Sum_probs=24.9

Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      ..|..++..+..+.+++...+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            3478999999889999999999999999975

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=90.54  E-value=12  Score=33.26  Aligned_cols=138  Identities=14%  Similarity=0.161  Sum_probs=0.0

Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe------CCCcEEEEECCCCeEEEeecCC----CCCeEEEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC------SDGNIAVWDLHNQTLVRQFQGH----TDGASCID  252 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~h----~~~v~~~~  252 (504)
                      |++||..+.+.  ...-.+-.+.|+++.|..+.++++.|.      ....+..||+.+......-.+-    .++|..+.
T Consensus        18 lC~yd~~~~qW--~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~   95 (281)
T PF12768_consen   18 LCLYDTDNSQW--SSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT   95 (281)
T ss_pred             EEEEECCCCEe--ecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE


Q ss_pred             Ecc--CCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc-CCceEEEEEcCCCCEEEEEeC
Q psy17188        253 ISA--DGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       253 ~~~--~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~  322 (504)
                      +..  ..+..+.|. .++.-.+...+..+..............+..+..... ...-.....-.+.+.|++.+.
T Consensus        96 ~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~l~~~~~~~~~~~~~~~~Llv~G~  169 (281)
T PF12768_consen   96 FISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLPLNSSSHDNSSLFDSDQVLLVTGS  169 (281)
T ss_pred             eeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEeccccccccccccCCCcEEEEEee

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.19  E-value=1.5  Score=43.65  Aligned_cols=74  Identities=22%  Similarity=0.311  Sum_probs=45.4

Q ss_pred             cCCCEEEEecCCCcEEEEeCCC---CCccceee----------e-----------ecCcCceEEEEECC----CCCEEEE
Q psy17188        169 PDGRTLIVGGEASNLSIWDLAS---PTPRIKAE----------L-----------TSSAPACYALAISP----DSKVCFS  220 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~---~~~~~~~~----------~-----------~~~~~~v~~~~~s~----~~~~l~~  220 (504)
                      ++...++.+..||.+.......   ........          +           .........++++.    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4677788888899988887664   11100000          0           01123345566665    6679999


Q ss_pred             EeCCCcEEEEECCCCeEEEeec
Q psy17188        221 CCSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       221 ~~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      .+.|+++++||+.+++++.+..
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEec
Confidence            9999999999999999977654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=89.97  E-value=36  Score=37.87  Aligned_cols=309  Identities=14%  Similarity=0.134  Sum_probs=147.0

Q ss_pred             cEEEEEEcCCCcEE-EEecC-CeEEEEeCCCCCCCC-c--eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        115 VVCAVTISNPTKYV-YTGGK-GCVKVWDISQPGSKT-P--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       115 ~V~~v~~s~~~~~l-~~~~d-~~i~vw~~~~~~~~~-~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .|.+...+++++.. .++.| ..+.+|++....... +  -..+.+.+......+|.++++  .|+++..+|.++.=++.
T Consensus       439 ~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~a~A~~VgLs~d--rLFvADseGkLYsa~l~  516 (1774)
T PF11725_consen  439 KLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGKAQAQSVGLSND--RLFVADSEGKLYSADLP  516 (1774)
T ss_pred             hcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCchhhhheeecCC--eEEEEeCCCCEEecccc
Confidence            45666777888874 45555 456999987642111 1  122333334447778888766  58888889998887775


Q ss_pred             CCCccceeeeecCcCce---EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        190 SPTPRIKAELTSSAPAC---YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ..+.. ...+..-....   ..-.|  .+...++|..       .-+.|++-..++.-.+.+.+..|..++..+=.|-.=
T Consensus       517 ~~~~~-~~~l~~~p~~~~~~~~~~~--G~~~~VtGF~-------~gd~G~lhAlikd~~GQ~Hs~aLde~~~~~~pGWNL  586 (1774)
T PF11725_consen  517 AAQDN-EPKLKLMPEPAYQLLGSAL--GGDHKVTGFI-------SGDDGQLHALIKDRQGQRHSHALDEQGSQLQPGWNL  586 (1774)
T ss_pred             cccCC-CcceEeccccccccccccc--cccceeeccc-------cCCCCeeeEEEeccCCceeeccccccCCccCCCCcc
Confidence            43211 11111111111   01111  1222333221       113455555555566666666776555544333111


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee-----
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-----  341 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----  341 (504)
                      ....+.+-..|-                  ........-..+.+...|.   ++-.+|.|+.||-.+..+.....     
T Consensus       587 Sd~Lvl~N~~GL------------------~~~~~p~~~~~ldl~r~G~---v~L~~G~i~~wD~ttq~W~~~~~kd~~~  645 (1774)
T PF11725_consen  587 SDALVLDNTRGL------------------PKPPAPAPHEILDLGRAGL---VGLQDGKIQYWDSTTQCWKDAGVKDIDQ  645 (1774)
T ss_pred             cceeEeeccCCC------------------CCCCCCChHHhhccccccc---eeeccceEeeecCcchhhhhccCcCHHH
Confidence            112222222221                  0000011111223333343   33357899999876654322111     


Q ss_pred             ---------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE
Q psy17188        342 ---------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       342 ---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~  412 (504)
                               +.-..+.+..+.+++....  ++- +.+..+.+=..++  ....-..+.... ...|..++.-.+. .+++
T Consensus       646 L~RG~D~~AYVLk~G~vk~l~i~~~~~~--~~~-g~~~~~a~~~~r~--~~e~G~~l~Gl~-~~~i~a~Avv~~~-~fva  718 (1774)
T PF11725_consen  646 LKRGLDGNAYVLKDGKVKRLSINQEHPS--IAH-GDNNVFALPQRRN--KVELGDALEGLE-DRVITAFAVVNDN-KFVA  718 (1774)
T ss_pred             HhccccCCceEecCCceeeeecccCCCc--ccc-CCCcccccccccC--CCCCCccccCCC-cCcceeEEEEcCC-ceEE
Confidence                     0112234444444444331  111 1111111100000  001111111112 4557788887654 4566


Q ss_pred             eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        413 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       413 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ....|.+.... +.+.+. .....+-.+.|..+++..+.++.| -..+|.++--
T Consensus       719 ld~qg~lt~h~-k~g~p~-~l~~~gl~G~ik~l~lD~~~nL~A-lt~~G~Lf~~  769 (1774)
T PF11725_consen  719 LDDQGDLTAHQ-KPGRPV-PLSRPGLSGEIKDLALDEKQNLYA-LTSTGELFRL  769 (1774)
T ss_pred             eccCCcccccc-CCCCCc-cCCCCCCCcchhheeeccccceeE-ecCCCceeec
Confidence            67889999988 555533 334445567888999988766555 4467766554

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=89.88  E-value=12  Score=32.33  Aligned_cols=148  Identities=18%  Similarity=0.301  Sum_probs=78.4

Q ss_pred             EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC-C--CeEEEEecCCCCCC-CcccccccccCCCceEEE
Q psy17188        326 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-K--SCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~--~~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~~~  401 (504)
                      -.+||+.+.+......  ....-+.+-.+.+||+  ++.+|+. +  ..+++++-...... .............+-...
T Consensus        48 s~~yD~~tn~~rpl~v--~td~FCSgg~~L~dG~--ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~  123 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTV--QTDTFCSGGAFLPDGR--LLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTA  123 (243)
T ss_pred             EEEEecCCCcEEeccC--CCCCcccCcCCCCCCC--EEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccc
Confidence            3567777764332221  1222344455778887  6666654 2  35778775431111 111111112333344466


Q ss_pred             EEcCCCCEEEEeeCCCc-EEEeeCCCC-Ccceeeccc------CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        402 KLLPDGRTLIVGGEASN-LSIWDLASP-TPRIKAELT------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~-i~iwd~~~~-~~~~~~~~~------~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      ..-|||+.|+.|+...- ..+|.-... .......+.      ....---.+...|||++++.+..+  -.|||..+.+.
T Consensus       124 ~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v  201 (243)
T PF07250_consen  124 TTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTV  201 (243)
T ss_pred             eECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeE
Confidence            77789999999887753 445544221 111111110      111111245778999999988765  45679888877


Q ss_pred             EEEEee
Q psy17188        474 VRQFQG  479 (504)
Q Consensus       474 ~~~~~~  479 (504)
                      ++.+..
T Consensus       202 ~~~lP~  207 (243)
T PF07250_consen  202 VRTLPD  207 (243)
T ss_pred             EeeCCC
Confidence            766653

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	504
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		1e-115
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		9e-70
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		3e-17
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		5e-14
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-05
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		6e-13
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		3e-12
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		6e-13
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		4e-12
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-12
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		6e-10
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		5e-12
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-11
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		4e-10
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-10
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		3e-04
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		4e-10
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		6e-07
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-10
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		7e-07
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-10
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-06
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		6e-10
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-07
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		7e-10
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		6e-07
2h9l_A	329	Wdr5delta23 Length = 329		7e-10
2h9l_A	329	Wdr5delta23 Length = 329		5e-07
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		7e-10
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		6e-07
2g99_A	308	Structural Basis For The Specific Recognition Of Me		8e-10
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-07
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		8e-10
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		8e-10
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		7e-07
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		8e-10
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		6e-07
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		8e-10
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		9e-10
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		6e-07
2gnq_A	336	Structure Of Wdr5 Length = 336		9e-10
2gnq_A	336	Structure Of Wdr5 Length = 336		7e-07
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		9e-10
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-09
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		7e-07
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-09
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		7e-07
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-09
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		8e-07
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		1e-09
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		1e-09
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		1e-09
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-09
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-09
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-07
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-09
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-07
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		4e-08
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		1e-07
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		1e-07
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		1e-07
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		3e-07
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		4e-06
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		3e-07
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		4e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		4e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-06
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		5e-07
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		5e-07
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		5e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		5e-07
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		8e-06
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		1e-04
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		2e-05
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-05
4g56_B	357	Crystal Structure Of Full Length Prmt5/mep50 Comple		2e-05
4g56_B	357	Crystal Structure Of Full Length Prmt5/mep50 Comple		1e-04
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		3e-05
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		5e-05
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-05
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		3e-04

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/270 (76%), Positives = 220/270 (81%), Gaps = 16/270 (5%)
Query: 65  LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNP 124
             G  G KPAYS+HVT DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNP
Sbjct: 3   FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP 62
Query: 125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 184
           T++VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDNYIRS KLLPDG TLIVGGEAS LS
Sbjct: 63  TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122
Query: 185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 244
           IWDLA+PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH
Sbjct: 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182
Query: 245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY 304
           TDGASCIDIS DGTKLWTGGLDNTVRSWDLREG                 QL      + 
Sbjct: 183 TDGASCIDISNDGTKLWTGGLDNTVRSWDLREG----------------RQLQQHDFTSQ 226
Query: 305 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 334
           I S+   P G  L VG E+SN+ +  +  P
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score =  261 bits (666), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 126/136 (92%), Positives = 129/136 (94%)
Query: 369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428
           K CVKVWDIS PG+K+PVSQLDCL RDNYIRS KLLPDG TLIVGGEAS LSIWDLA+PT
Sbjct: 71  KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT 130
Query: 429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 488
           PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID
Sbjct: 131 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190
Query: 489 ISADGTKLWTGGLDNT 504
           IS DGTKLWTGGLDNT
Sbjct: 191 ISNDGTKLWTGGLDNT 206

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 146/348 (41%), Gaps = 48/348 (13%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           +  V   PDG+T+    +   + +W+      ++   LT  + + + +A SPD +   S 
Sbjct: 265 VNGVAFRPDGQTIASASDDKTVKLWN---RNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 321
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV 281
             D  + +W+ + Q L +   GH+     +  S DG  + +   D TV+ W+ R G +  
Sbjct: 322 SDDKTVKLWNRNGQHL-QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQL-- 377
Query: 282 WDISQPGSKTPVSQLDCLQ-RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
                         L  L    + +R V   PDG+T+    +   + +W+      ++  
Sbjct: 378 --------------LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN---RNGQLLQ 420
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS 400
            LT  + + + +A SPD ++   +S      VK+W+ +    +T           + +R 
Sbjct: 421 TLTGHSSSVWGVAFSPDDQT--IASASDDKTVKLWNRNGQLLQTLTGH------SSSVRG 472
Query: 401 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 460
           V   PDG+T+    +   + +W+      ++   LT  + +   +A SPD +   S   D
Sbjct: 473 VAFSPDGQTIASASDDKTVKLWN---RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 529
Query: 461 GNIAVWDLHNQTLVRQFQGHT----------DGASCIDISADGT-KLW 497
             + +W+ + Q L++   GH+          DG +    S+D T KLW
Sbjct: 530 KTVKLWNRNGQ-LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 39/308 (12%)
Query: 95  LIGPGIPRH--ARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQ 152
           L  P +PR        +L H  VVC V  SN  +Y+ TG     +V+ +S       +S 
Sbjct: 44  LYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSD 103
Query: 153 LDCLQRD-------------NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 199
                +D              YIRSV   PDG+ L  G E   + IWD+ +   +I   L
Sbjct: 104 DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMIL 161
Query: 200 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDIS-AD 256
                  Y+L   P      S   D  + +WDL     +L    +   DG + + +S  D
Sbjct: 162 QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGD 218
Query: 257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 316
           G  +  G LD  VR WD   G +     S+  S T         +D+ + SV    DG++
Sbjct: 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG-------HKDS-VYSVVFTRDGQS 270
Query: 317 LIVGGEASNLSIWDLASPTPRIKA--------ELTSSAPACYALAISPDSKSPFFSSHHY 368
           ++ G    ++ +W+L +   +  +        E+T      + L+++      +  S   
Sbjct: 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 330
Query: 369 KSCVKVWD 376
              V  WD
Sbjct: 331 DRGVLFWD 338

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 343 TSSAPA----CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI 398
           TSS+P+      ++  SPD K  F ++      +++WDI    ++  V  L   ++D Y 
Sbjct: 116 TSSSPSSDLYIRSVCFSPDGK--FLATGAEDRLIRIWDIE---NRKIVMILQGHEQDIY- 169
Query: 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSC 457
            S+   P G  L+ G     + IWDL +    +   +         +A+SP D K   + 
Sbjct: 170 -SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT---VAVSPGDGKYIAAG 225
Query: 458 CSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISADGTKLWTGGLDNT 504
             D  + VWD     LV +         GH D    +  + DG  + +G LD +
Sbjct: 226 SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 99  GIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQ 157
           GIP+ A +     H   V  V IS+  ++  +G   G +++WD++   + T   +     
Sbjct: 76  GIPQRALR----GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT---TGTTTRRFVGHT 128
Query: 158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWD-LASPTPRIKAELTSSAPACYALAISPDSK 216
           +D  + SV    D R ++ G     + +W+ L      ++ E  S   +C   + +  + 
Sbjct: 129 KD--VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186
Query: 217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE 276
           +  SC  D  + VW+L N  L     GHT   + + +S DG+   +GG D     WDL E
Sbjct: 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246
Query: 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-- 334
           G                  L  L   + I ++   P+ R  +      ++ IWDL     
Sbjct: 247 G----------------KHLYTLDGGDIINALCFSPN-RYWLCAATGPSIKIWDLEGKII 289
Query: 335 TPRIKAELTSSA-----PACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378
              +K E+ S++     P C +LA S D ++ F  + +  + V+VW ++
Sbjct: 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLF--AGYTDNLVRVWQVT 336

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 131/339 (38%), Gaps = 44/339 (12%)
Query: 182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTL--- 237
           NL    + +    ++  L         +A +P    +  S   D  I +W L        
Sbjct: 17  NLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG 76
Query: 238 --VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ 295
              R  +GH+   S + IS+DG    +G  D T+R WDL  G             T   +
Sbjct: 77  IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG-------------TTTRR 123
Query: 296 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD-LASPTPRIKAELTSSAPACYALAI 354
                +D  + SV    D R ++ G     + +W+ L      ++ E  S   +C  +  
Sbjct: 124 FVGHTKD--VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC--VRF 179
Query: 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414
           SP+S +P   S  +   VKVW+++    KT     + +    Y+ +V + PDG     GG
Sbjct: 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKT-----NHIGHTGYLNTVTVSPDGSLCASGG 234
Query: 415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTL 473
           +     +WDL         +         AL  SP+    + C + G +I +WDL  + +
Sbjct: 235 KDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRY--WLCAATGPSIKIWDLEGKII 289
Query: 474 VRQFQGHTDGAS-------CIDI--SADGTKLWTGGLDN 503
           V + +      S       C  +  SADG  L+ G  DN
Sbjct: 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 99  GIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQ 157
           GIP+ A +     H   V  V IS+  ++  +G   G +++WD++   + T   +     
Sbjct: 53  GIPQRALR----GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT---TGTTTRRFVGHT 105
Query: 158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWD-LASPTPRIKAELTSSAPACYALAISPDSK 216
           +D  + SV    D R ++ G     + +W+ L      ++ E  S   +C   + +  + 
Sbjct: 106 KD--VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE 276
           +  SC  D  + VW+L N  L     GHT   + + +S DG+   +GG D     WDL E
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-- 334
           G                  L  L   + I ++   P+ R  +      ++ IWDL     
Sbjct: 224 G----------------KHLYTLDGGDIINALCFSPN-RYWLCAATGPSIKIWDLEGKII 266
Query: 335 TPRIKAELTSSA-----PACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378
              +K E+ S++     P C +LA S D ++ F  + +  + V+VW ++
Sbjct: 267 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLF--AGYTDNLVRVWQVT 313

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 120/303 (39%), Gaps = 43/303 (14%)
Query: 217 VCFSCCSDGNIAVWDLHNQTL-----VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRS 271
           +  S   D  I +W L           R  +GH+   S + IS+DG    +G  D T+R 
Sbjct: 30  MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
Query: 272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD- 330
           WDL  G             T   +     +D  + SV    D R ++ G     + +W+ 
Sbjct: 90  WDLTTG-------------TTTRRFVGHTKD--VLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 331 LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD 390
           L      ++ E  S   +C  +  SP+S +P   S  +   VKVW+++    KT     +
Sbjct: 135 LGVCKYTVQDESHSEWVSC--VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT-----N 187
Query: 391 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD 450
            +    Y+ +V + PDG     GG+     +WDL         +         AL  SP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPN 244
Query: 451 SKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGAS-------CIDI--SADGTKLWTGG 500
               + C + G +I +WDL  + +V + +      S       C  +  SADG  L+ G 
Sbjct: 245 RY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 501 LDN 503
            DN
Sbjct: 303 TDN 305

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/325 (19%), Positives = 119/325 (36%), Gaps = 46/325 (14%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           +  V   P    ++   E + + +WD    T   +  L     +   ++     K+  SC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASC 168
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
            +D  I +WD      +R   GH    S + I  +G  + +   D T++ W+++ G CVK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
            +     G +             ++R V+   DG  +        + +W +A  T   KA
Sbjct: 229 TF----TGHR------------EWVRMVRPNQDGTLIASCSNDQTVRVWVVA--TKECKA 270
Query: 341 ELTSSAPACYALAISPDSK------------------SPFFSSHHYKSCVKVWDISQPGS 382
           EL         ++ +P+S                    PF  S      +K+WD+S    
Sbjct: 271 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS---- 326
Query: 383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 442
            T +  +  +  DN++R V     G+ ++   +   L +WD  +   R    L +     
Sbjct: 327 -TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN--KRCMKTLNAHEHFV 383
Query: 443 YALAISPDSKVCFSCCSDGNIAVWD 467
            +L     +    +   D  + VW+
Sbjct: 384 TSLDFHKTAPYVVTGSVDQTVKVWE 408

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/333 (18%), Positives = 113/333 (33%), Gaps = 44/333 (13%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P P  K  L+        +   P   V  S   D  I VWD       R  +GHTD    
Sbjct: 96  PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ----RDNYIR 306
           I     G  L +   D T++ WD +                     +C++     D+ + 
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQ-------------------GFECIRTMHGHDHNVS 196
Query: 307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH 366
           SV ++P+G  ++       + +W++ +         T +    +   + P+      +S 
Sbjct: 197 SVSIMPNGDHIVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 367 HYKSCVKVWDISQPGSKTPVSQ----LDCLQR--DNYIRSVKLLPDGRT---------LI 411
                V+VW ++    K  + +    ++C+    ++   S+       T         L+
Sbjct: 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471
            G     + +WD++  T      L         +      K   SC  D  + VWD  N+
Sbjct: 313 SGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 472 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
             ++    H    + +D       + TG +D T
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 116/281 (41%), Gaps = 50/281 (17%)
Query: 239 RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC 298
           R+ +GH+   S + +S +G    +   D+++R W+L+ G                 Q   
Sbjct: 61  RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNG---------------QCQYKF 105
Query: 299 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA--LAISP 356
           L     + SV   PD R ++ GG  + L +W++          L+  A   +   +  SP
Sbjct: 106 LGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNVKGECMHT---LSRGAHTDWVSCVRFSP 162
Query: 357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416
              +P   S  + + VKVWD++     T     D     NY+ SV + PDG       + 
Sbjct: 163 SLDAPVIVSGGWDNLVKVWDLATGRLVT-----DLKGHTNYVTSVTVSPDGSLCASSDKD 217
Query: 417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-------CCSDGNIAVWDLH 469
               +WDL       K E  S   A      +P +++CFS         ++  I ++DL 
Sbjct: 218 GVARLWDLT------KGEALSEMAAG-----APINQICFSPNRYWMCAATEKGIRIFDLE 266
Query: 470 NQTLVRQFQGHTDGA-----SCIDI--SADGTKLWTGGLDN 503
           N+ ++ +      G+      C+ I  SADG+ L++G  DN
Sbjct: 267 NKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSGYTDN 307

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 50/338 (14%)
Query: 111 SHGEVVCAVT--ISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 168
           +H ++V A+   I N    V       + +W +++      V+Q       +++  V L 
Sbjct: 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 439
Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228
            DG+  + G     L +WDLA+     +           ++A S D++   S   D  I 
Sbjct: 440 SDGQFALSGSWDGELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDRTIK 497
Query: 229 VWDLHNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV--RSWDLREGCVKVWD 283
           +W+   +   T+    +GH D  SC+  S +        L  T+   SWD     VKVW+
Sbjct: 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPN-------TLQPTIVSASWD---KTVKVWN 547
Query: 284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343
           +S    ++ ++         Y+ +V + PDG     GG+   + +WDLA        E  
Sbjct: 548 LSNCKLRSTLA-----GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 602
Query: 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL------DCLQRDN- 396
           S     +AL  SP+      ++ H    +K+WD+    SK+ V  L      +  + DN 
Sbjct: 603 S---VIHALCFSPNRYWLCAATEH---GIKIWDLE---SKSIVEDLKVDLKAEAEKADNS 653
Query: 397 ----------YIRSVKLLPDGRTLIVGGEASNLSIWDL 424
                     Y  S+    DG TL  G     + +W +
Sbjct: 654 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 38/288 (13%)
Query: 214 DSKVCFSCCSDGNIAVWDLHNQ-----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 268
           ++ +  S   D +I +W L           R+  GH+     + +S+DG    +G  D  
Sbjct: 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453
Query: 269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 328
           +R WDL  G               VS    +     + SV    D R ++       + +
Sbjct: 454 LRLWDLAAG---------------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 498
Query: 329 WD-LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS 387
           W+ L      I             +  SP++  P   S  +   VKVW++S    ++ ++
Sbjct: 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 558
Query: 388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 447
                    Y+ +V + PDG     GG+   + +WDLA        E  S     +AL  
Sbjct: 559 G-----HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS---VIHALCF 610
Query: 448 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK 495
           SP+ +      ++  I +WDL ++++V   +        +D+ A+  K
Sbjct: 611 SPN-RYWLCAATEHGIKIWDLESKSIVEDLK--------VDLKAEAEK 649

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 136/352 (38%), Gaps = 45/352 (12%)
Query: 82  DGQMQPVPFPPDALIGPGIPRHARQINTLSHG-EVVCAVTISNPTKYVYTGGKGCVKVWD 140
           D ++  V    +AL G  + +  R +    HG +V+C     +  + V +   G V VWD
Sbjct: 36  DVELHQVAERVEAL-GQFVMKTRRTLK--GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWD 92
Query: 141 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-------SPTP 193
            S   +K     + C     ++ +    P G  +  GG  +  S++ L        +   
Sbjct: 93  -SFTTNKEHAVTMPC----TWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           +  A  T+   AC   + +       +   DG  A+WD+ +  L++ F GH     C+D+
Sbjct: 148 KSVAMHTNYLSAC---SFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204
Query: 254 --SADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310
             S  G    +GG D     WD+R G CV+ ++  +                  + SV+ 
Sbjct: 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD----------------VNSVRY 248
Query: 311 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS 370
            P G     G + +   ++DL +          S      ++  S   +  F   + Y  
Sbjct: 249 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT- 307
Query: 371 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 422
            + VWD+ + GS+  +        +N + ++++ PDG     G     L +W
Sbjct: 308 -INVWDVLK-GSRVSI----LFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/297 (19%), Positives = 99/297 (33%), Gaps = 26/297 (8%)
Query: 213 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-----DGTKLWTGGLDN 267
            D +   S   DG + VWD          + H     C  + A      G  +  GGLDN
Sbjct: 74  KDKRRIVSSSQDGKVIVWDSFTTN-----KEHAVTMPCTWVMACAYAPSGCAIACGGLDN 128
Query: 268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS 327
               + L                    +       NY+ +         ++        +
Sbjct: 129 KCSVYPL---------TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCA 179
Query: 328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS 387
           +WD+ S   ++             L ++P      F S        VWD+    S   V 
Sbjct: 180 LWDVESG--QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQ 234
Query: 388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 447
             +  + D  + SV+  P G     G + +   ++DL +          S      ++  
Sbjct: 235 AFETHESD--VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292
Query: 448 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           S   ++ F+  +D  I VWD+   + V    GH +  S + +S DGT   +G  D+T
Sbjct: 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT 349

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 112/300 (37%), Gaps = 30/300 (10%)
Query: 187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 246
           +   P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  
Sbjct: 10  EFVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 69
Query: 247 GASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYI 305
           G S +  S+D   L +   D T++ WD+  G C+K                      NY+
Sbjct: 70  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYV 113
Query: 306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS 365
                 P    ++ G    ++ IWD+   T +    L + +    A+  + D       S
Sbjct: 114 FCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVS 169
Query: 366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWD 423
             Y    ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD
Sbjct: 170 SSYDGLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 223
Query: 424 LASPTPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
            +            +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 224 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 283

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 71
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 72  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 115
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 116 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 163
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 223 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 262

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 112/300 (37%), Gaps = 30/300 (10%)
Query: 187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 246
           +   P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  
Sbjct: 10  EFVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 69
Query: 247 GASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYI 305
           G S +  S+D   L +   D T++ WD+  G C+K                      NY+
Sbjct: 70  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYV 113
Query: 306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS 365
                 P    ++ G    ++ IWD+   T +    L + +    A+  + D       S
Sbjct: 114 FCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVS 169
Query: 366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWD 423
             Y    ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD
Sbjct: 170 SSYDGLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 223
Query: 424 LASPTPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
            +            +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 224 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 283

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 71
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 72  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 115
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 116 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 163
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 223 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 262

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 29  VSSVKFSPNGEWLAASSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 86
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 87  SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 146
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 147 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 189
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNYIR 399
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y  
Sbjct: 190 LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGH----KNEKYCI 243
Query: 400 SVKLLPDGRTLIVGGEASNL-SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
                  G   IV G   NL  IW+L   T  I  +L        + A  P   +  S  
Sbjct: 244 FANFSVTGGKWIVSGSEDNLVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 301
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 302 LENDKTIKLW 311

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 100/280 (35%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L     D  ++ W   +G    ++ +  G K  +
Sbjct: 15  NYALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDG---KFEKTISGHKLGI 71
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 72  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 115
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 116 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 163
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 223 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 262

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 76
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 77  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 120
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 121 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 176
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 177 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 230
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 231 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 286

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 18  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 74
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 75  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 118
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 119 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 166
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 226 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 265

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 76
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 77  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 120
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 121 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 176
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 177 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 230
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 231 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 286

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 18  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 74
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 75  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 118
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 119 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 166
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 226 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 265

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 43  VSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 100
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 101 SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 160
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 161 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 203
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNYIR 399
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y  
Sbjct: 204 LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGH----KNEKYCI 257
Query: 400 SVKLLPDGRTLIVGGEASNL-SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
                  G   IV G   NL  IW+L   T  I  +L        + A  P   +  S  
Sbjct: 258 FANFSVTGGKWIVSGSEDNLVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 315
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 316 LENDKTIKLW 325

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 29  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 85
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 86  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 129
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 130 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 177
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 178 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 236
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 237 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 276

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 76
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 77  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 120
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 121 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 176
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 177 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 230
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 231 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 286

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 18  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 74
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 75  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 118
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 119 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 166
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 226 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 265

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 22  VSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 79
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 80  SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 139
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 140 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 182
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNYIR 399
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y  
Sbjct: 183 LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGH----KNEKYCI 236
Query: 400 SVKLLPDGRTLIVGGEASNL-SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
                  G   IV G   NL  IW+L   T  I  +L        + A  P   +  S  
Sbjct: 237 FANFSVTGGKWIVSGSEDNLVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 294
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 295 LENDKTIKLW 304

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 8   NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 64
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 65  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 108
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 109 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 156
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 157 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 215
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 216 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 255

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 50/260 (19%)
Query: 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVW 282
           D  I V+D  N+  + Q  GH  G   +   A G  L +G  D TVR WD+++G C  V+
Sbjct: 141 DKMIRVYDSINKKFLLQLSGHDGGVWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVF 199
Query: 283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342
           +    G  + V  LD ++  N           + ++ G   + L +W L    P+  +  
Sbjct: 200 E----GHNSTVRCLDIVEYKNI----------KYIVTGSRDNTLHVWKL----PKESSVP 241
Query: 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 402
                  Y L      ++P+F                         +  L+   ++ SV+
Sbjct: 242 DHGEEHDYPLVFHTPEENPYF-------------------------VGVLR--GHMASVR 274
Query: 403 LLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 461
            +     ++V G   N L +WD+A    +    L+      Y+     + K C S   D 
Sbjct: 275 TVSGHGNIVVSGSYDNTLIVWDVAQ--MKCLYILSGHTDRIYSTIYDHERKRCISASMDT 332
Query: 462 NIAVWDLHNQTLVRQFQGHT 481
            I +WDL N  L+   QGHT
Sbjct: 333 TIRIWDLENGELMYTLQGHT 352

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 16  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 75
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 76  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 119
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 120 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 175
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 176 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 229
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 230 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 285

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 17  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 73
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 74  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 117
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 118 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 165
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 166 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 224
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 225 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 264

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 10  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 69
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 70  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 113
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 114 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 169
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 170 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 223
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 224 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 279

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 11  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 67
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 68  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 111
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 112 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 159
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 160 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 218
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 219 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 258

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 120/311 (38%), Gaps = 25/311 (8%)
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           R +  L       YA+    DS++  S   DG + +WD +    V      +        
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 254 SADGTKLWTGGLDNTVRSWDL--REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           +  G  +  GGLDN    ++L  REG V+V       S+             Y+   + L
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRV-------SRELAGHT------GYLSCCRFL 152
Query: 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371
            D + +   G+ +  ++WD+ +         T       +L+++PD++   F S    + 
Sbjct: 153 DDNQIVTSSGDTT-CALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTR--LFVSGACDAS 207
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
            K+WD+ +   +   +       ++ I ++   P+G     G + +   ++DL +    +
Sbjct: 208 AKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491
                +      +++ S   ++  +   D N  VWD           GH +  SC+ ++ 
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 492 DGTKLWTGGLD 502
           DG  + TG  D
Sbjct: 323 DGMAVATGSWD 333

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 33  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 93  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 136
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 192
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 193 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 34  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 90
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 91  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 134
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 182
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 242 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 35  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 94
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 95  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 138
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 139 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 194
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 195 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 248
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 249 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 304

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 36  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 92
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 93  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 136
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 137 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 184
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 185 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 243
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 244 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 283

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 120/311 (38%), Gaps = 25/311 (8%)
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           R +  L       YA+    DS++  S   DG + +WD +    V      +        
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 254 SADGTKLWTGGLDNTVRSWDL--REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           +  G  +  GGLDN    ++L  REG V+V       S+             Y+   + L
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRV-------SRELAGHT------GYLSCCRFL 152
Query: 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371
            D + +   G+ +  ++WD+ +         T       +L+++PD++   F S    + 
Sbjct: 153 DDNQIVTSSGDTT-CALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTR--LFVSGACDAS 207
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
            K+WD+ +   +   +       ++ I ++   P+G     G + +   ++DL +    +
Sbjct: 208 AKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491
                +      +++ S   ++  +   D N  VWD           GH +  SC+ ++ 
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 492 DGTKLWTGGLD 502
           DG  + TG  D
Sbjct: 323 DGMAVATGSWD 333

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 11  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 70
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 71  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 114
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 115 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 170
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 171 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 280

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 12  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 68
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 69  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 112
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 113 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 160
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 161 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 219
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 30/296 (10%)
Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P   +K  L     A  ++  SP+ +   S  +D  I +W  ++    +   GH  G S 
Sbjct: 12  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 71
Query: 251 IDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
           +  S+D   L +   D T++ WD+  G C+K                      NY+    
Sbjct: 72  VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT----------------LKGHSNYVFCCN 115
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             P    ++ G    ++ IWD+   T +    L + +    A+  + D       S  Y 
Sbjct: 116 FNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYD 171
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNY--IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
              ++WD +          L  L  D+   +  VK  P+G+ ++     + L +WD +  
Sbjct: 172 GLCRIWDTASGQC------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 225
Query: 428 TPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 482
                     +   C +A       K   S   D  + +W+L  + +V++ QGHTD
Sbjct: 226 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 281

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 13  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 69
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 70  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 113
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 114 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 161
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 162 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 220
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 221 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 260

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 26  VSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 83
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 84  SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 143
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 144 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 186
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNYIR 399
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y  
Sbjct: 187 LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGH----KNEKYCI 240
Query: 400 SVKLLPDGRTLIVGGEASNL-SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
                  G   IV G   NL  IW+L   T  I  +L        + A  P   +  S  
Sbjct: 241 FANFSVTGGKWIVSGSEDNLVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 298
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 299 LENDKTIKLW 308

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 101/280 (36%), Gaps = 42/280 (15%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L     GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 12  NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 68
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 69  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 112
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDI-------SQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
            + + +S    S  +   V++WD+       + P    PVS            +V    D
Sbjct: 113 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS------------AVHFNRD 160
Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  ++         IWD AS    +K  +    P    +  SP+ K   +   D  + +W
Sbjct: 161 GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 219
Query: 467 DLHNQTLVRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           D      ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 120/311 (38%), Gaps = 25/311 (8%)
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           R +  L       YA+    DS++  S   DG + +WD +    V      +        
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 254 SADGTKLWTGGLDNTVRSWDL--REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           +  G  +  GGLDN    ++L  REG V+V       S+             Y+   + L
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRV-------SRELAGHT------GYLSCCRFL 152
Query: 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371
            D + +   G+ +  ++WD+ +         T       +L+++PD++   F S    + 
Sbjct: 153 DDNQIVTSSGDTT-CALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTR--LFVSGACDAS 207
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
            K+WD+ +   +   +       ++ I ++   P+G     G + +   ++DL +    +
Sbjct: 208 AKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491
                +      +++ S   ++  +   D N  VWD           GH +  SC+ ++ 
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 492 DGTKLWTGGLD 502
           DG  + TG  D
Sbjct: 323 DGMAVATGSWD 333

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 120/311 (38%), Gaps = 25/311 (8%)
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           R +  L       YA+    DS++  S   DG + +WD +    V      +        
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 254 SADGTKLWTGGLDNTVRSWDL--REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           +  G  +  GGLDN    ++L  REG V+V       S+             Y+   + L
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRV-------SRELAGHT------GYLSCCRFL 152
Query: 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371
            D + +   G+ +  ++WD+ +         T       +L+++PD++   F S    + 
Sbjct: 153 DDNQIVTSSGDTT-CALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTR--LFVSGACDAS 207
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
            K+WD+ +   +   +       ++ I ++   P+G     G + +   ++DL +    +
Sbjct: 208 AKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491
                +      +++ S   ++  +   D N  VWD           GH +  SC+ ++ 
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 492 DGTKLWTGGLD 502
           DG  + TG  D
Sbjct: 323 DGMAVATGSWD 333

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 120/311 (38%), Gaps = 25/311 (8%)
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 253
           R +  L       YA+    DS++  S   DG + +WD +    V      +        
Sbjct: 57  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 116
Query: 254 SADGTKLWTGGLDNTVRSWDL--REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL 311
           +  G  +  GGLDN    ++L  REG V+V       S+             Y+   + L
Sbjct: 117 APSGNYVACGGLDNICSIYNLKTREGNVRV-------SRELAGHT------GYLSCCRFL 163
Query: 312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC 371
            D + +   G+ +  ++WD+ +         T       +L+++PD++   F S    + 
Sbjct: 164 DDNQIVTSSGDTT-CALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTR--LFVSGACDAS 218
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
            K+WD+ +   +   +       ++ I ++   P+G     G + +   ++DL +    +
Sbjct: 219 AKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 273
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA 491
                +      +++ S   ++  +   D N  VWD           GH +  SC+ ++ 
Sbjct: 274 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 333
Query: 492 DGTKLWTGGLD 502
           DG  + TG  D
Sbjct: 334 DGMAVATGSWD 344

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 99/260 (38%), Gaps = 50/260 (19%)
Query: 224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVW 282
           D  I V+D  N+  + Q  GH  G   +   A G  L +G  D TVR WD+++G C  V+
Sbjct: 141 DKXIRVYDSINKKFLLQLSGHDGGVWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVF 199
Query: 283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342
           +    G  + V  LD ++  N           + ++ G   + L +W L    P+  +  
Sbjct: 200 E----GHNSTVRCLDIVEYKNI----------KYIVTGSRDNTLHVWKL----PKESSVP 241
Query: 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 402
                  Y L      ++P+F                         +  L+   +  SV+
Sbjct: 242 DHGEEHDYPLVFHTPEENPYF-------------------------VGVLR--GHXASVR 274
Query: 403 LLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 461
            +     ++V G   N L +WD+A    +    L+      Y+     + K C S   D 
Sbjct: 275 TVSGHGNIVVSGSYDNTLIVWDVAQ--XKCLYILSGHTDRIYSTIYDHERKRCISASXDT 332
Query: 462 NIAVWDLHNQTLVRQFQGHT 481
            I +WDL N  L    QGHT
Sbjct: 333 TIRIWDLENGELXYTLQGHT 352

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 86
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 87  SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLK 146
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 147 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 189
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNY-I 398
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y I
Sbjct: 190 LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGH----KNEKYCI 243
Query: 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
            +   +  G+ ++ G E + + IW+L   T  I  +L        + A  P   +  S  
Sbjct: 244 FANFSVTGGKWIVSGSEDNMVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 301
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 302 LENDKTIKLW 311

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 102/273 (37%), Gaps = 28/273 (10%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L+    GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 15  NYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 71
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 72  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 115
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 413
            + + +S    S  +   V++WD+     KT +         + + +V    DG  ++  
Sbjct: 116 CNFNPQSNLIVSGSFDESVRIWDV-----KTGMCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 414 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 473
                  IWD AS    +K  +    P    +  SP+ K   +   D  + +WD      
Sbjct: 171 SYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 229
Query: 474 VRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 230 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 262

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 32/310 (10%)
Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           + SVK  P+G  L        + IW   +   + +  ++        +A S DS +  S 
Sbjct: 29  VSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 86
Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVK 280
             D  + +WD+ +   ++  +GH++   C + +     + +G  D +VR WD++ G C+K
Sbjct: 87  SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLK 146
Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 340
               + P    PVS            +V    DG  ++         IWD AS    +K 
Sbjct: 147 ----TLPAHSDPVS------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKT 189
Query: 341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQRDNY-I 398
            +    P    +  SP+ K  +  +    + +K+WD S+    KT        + + Y I
Sbjct: 190 LIDDDNPPVSFVKFSPNGK--YILAATLDNDLKLWDYSKGKCLKTYTGH----KNEKYCI 243
Query: 399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 458
            +   +  G+ ++ G E + + IW+L   T  I  +L        + A  P   +  S  
Sbjct: 244 FANFSVTGGKWIVSGSEDNMVYIWNL--QTKEIVQKLQGHTDVVISTACHPTENIIASAA 301
Query: 459 --SDGNIAVW 466
             +D  I +W
Sbjct: 302 LENDKTIKLW 311

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 103/273 (37%), Gaps = 28/273 (10%)
Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV 293
           N  L+    GHT   S +  S +G  L +   D  ++ W   +G    ++ +  G K  +
Sbjct: 15  NYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGI 71
Query: 294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 353
           S             V    D   L+   +   L IWD++S     K   T    + Y   
Sbjct: 72  SD------------VAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFC 115
Query: 354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 413
            + + +S    S  +   V++WD+     KT +         + + +V    DG  ++  
Sbjct: 116 CNFNPQSNLIVSGSFDESVRIWDV-----KTGMCLKTLPAHSDPVSAVHFNRDGSLIVSS 170
Query: 414 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 473
                  IWD AS    +K  +    P    +  SP+ K   +   D ++ +WD      
Sbjct: 171 SYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNDLKLWDYSKGKC 229
Query: 474 VRQFQGHTDGASCI--DISADGTK-LWTGGLDN 503
           ++ + GH +   CI  + S  G K + +G  DN
Sbjct: 230 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 262

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 119/293 (40%), Gaps = 30/293 (10%)
Query: 213 PDSKVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISADGTKLWTGGLDNTVR 270
            +S+   +   D  + VW   ++ L  Q+  +GH  G   +DIS       +  LD  +R
Sbjct: 46  ENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 330
            WDL  G               +  +D    D +  ++   PD + L  G     ++I+ 
Sbjct: 106 LWDLENG-------------KQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVGKVNIFG 150
Query: 331 LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD 390
           + S   + +  L +      ++A SPD K  + +S      + ++DI+          L 
Sbjct: 151 VESG--KKEYSLDTRGKFILSIAYSPDGK--YLASGAIDGIINIFDIATG------KLLH 200
Query: 391 CLQRDNY-IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP 449
            L+     IRS+   PD + L+   +   + I+D+      +   L+  A     +A  P
Sbjct: 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCP 258
Query: 450 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD 502
           D     S  SD ++ VWD+  +T V  F  H D    +  + +G+K+ + G D
Sbjct: 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 120/310 (38%), Gaps = 28/310 (9%)
Query: 207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD 266
           Y+L  +P+     S   DG + VW+          + H         + +G  +  GGLD
Sbjct: 70  YSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD 129
Query: 267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASN 325
           +    ++L          +      PVS++       Y  S + +PD  T LI G     
Sbjct: 130 SACSIFNLSSQ-------ADRDGNMPVSRV-LTGHKGYASSCQYVPDQETRLITGSGDQT 181
Query: 326 LSIWDLASPTPRIKAELTSSAPACY---ALAISPDS-KSPFFSSHHYKSCVKVWDISQPG 381
             +WD+ +   RI     S  P+ +    L++S +S  +  F S    + V++WD+    
Sbjct: 182 CVLWDVTTG-QRISI-FGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS 239
Query: 382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-----RIKAELT 436
                        +  I SVK  PDG+    G +     ++D+ +        R      
Sbjct: 240 RAVRTYH----GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND 295
Query: 437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF----QGHTDGASCIDISAD 492
           +  P   ++A S   ++ F+  S+G+  VWD     +V         H    SC+ +S+D
Sbjct: 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD 355
Query: 493 GTKLWTGGLD 502
           G+ L TG  D
Sbjct: 356 GSALCTGSWD 365

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 137/354 (38%), Gaps = 39/354 (11%)
Query: 169  PDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNI 227
             DG  +IV  +   L ++D+   T  + AE+ T           SP   +     S   +
Sbjct: 815  ADGDKIIVAAKNKVL-LFDI--HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCV 871
Query: 228  AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC-------VK 280
             +W++ ++  V   +GH      +  S DG+   T   D T+R W+ ++ C        +
Sbjct: 872  ELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 931
Query: 281  VWDISQPGSKTPVSQLDCLQRDNYIR----SVKLLPDGRT-----------LIVGGEASN 325
              D+    ++T V  +D ++    I      +  LP+ +            +  G E   
Sbjct: 932  EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGA 991
Query: 326  LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP 385
            + I +L  P  R+ +       A   +  + D K+   SS    S ++VW+  Q G    
Sbjct: 992  IKIIEL--PNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE--DSVIQVWNW-QTGDYVF 1046
Query: 386  VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 445
            +           ++  +LL D R L    + + + +W++   T RI+ + T       + 
Sbjct: 1047 LQ-----AHQETVKDFRLLQDSRLLSWSFDGT-VKVWNVI--TGRIERDFTCHQGTVLSC 1098
Query: 446  AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG 499
            AIS D+    S  +D    +W     + + + +GH     C   S DG  L TG
Sbjct: 1099 AISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATG 1152

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 137/354 (38%), Gaps = 39/354 (11%)
Query: 169  PDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNI 227
             DG  +IV  +   L ++D+   T  + AE+ T           SP   +     S   +
Sbjct: 808  ADGDKIIVAAKNKVL-LFDI--HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCV 864
Query: 228  AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC-------VK 280
             +W++ ++  V   +GH      +  S DG+   T   D T+R W+ ++ C        +
Sbjct: 865  ELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924
Query: 281  VWDISQPGSKTPVSQLDCLQRDNYIR----SVKLLPDGRT-----------LIVGGEASN 325
              D+    ++T V  +D ++    I      +  LP+ +            +  G E   
Sbjct: 925  EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGA 984
Query: 326  LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP 385
            + I +L  P  R+ +       A   +  + D K+   SS    S ++VW+  Q G    
Sbjct: 985  IKIIEL--PNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE--DSVIQVWNW-QTGDYVF 1039
Query: 386  VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 445
            +           ++  +LL D R L    + + + +W++   T RI+ + T       + 
Sbjct: 1040 LQ-----AHQETVKDFRLLQDSRLLSWSFDGT-VKVWNVI--TGRIERDFTCHQGTVLSC 1091
Query: 446  AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG 499
            AIS D+    S  +D    +W     + + + +GH     C   S DG  L TG
Sbjct: 1092 AISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATG 1145

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 105 RQINTLSHGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQ-PGSKTPVSQLDCLQRDNYI 162
           ++I T   G V+C   +    + + TG     V+VWD++      T +   + +      
Sbjct: 166 KRILTGHTGSVLC---LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV------ 216
Query: 163 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 222
             + L  +   ++   +  ++++WD+ASPT      +     A   + +  D K   S  
Sbjct: 217 --LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV-VDFDDKYIVSAS 273
Query: 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKV 281
            D  I VW+      VR   GH  G +C+        + +G  DNT+R WD+  G C++V
Sbjct: 274 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV 331
Query: 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL-ASPTPR 337
            +                  +  +R ++   D + ++ G     + +WDL A+  PR
Sbjct: 332 LE----------------GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPR 370

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 94/257 (36%), Gaps = 37/257 (14%)
Query: 214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
           D +   S   D  I +WD +     R   GHT    C+    D   + TG  D+TVR WD
Sbjct: 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL--QYDERVIITGSSDSTVRVWD 199
Query: 274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 333
           +  G             T +   + +        + L  +   ++   +  ++++WD+AS
Sbjct: 200 VNTG---------EMLNTLIHHCEAV--------LHLRFNNGMMVTCSKDRSIAVWDMAS 242
Query: 334 PTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL 392
           PT   ++  L     A   +    D    +  S      +KVW+ S       +      
Sbjct: 243 PTDITLRRVLVGHRAAVNVV----DFDDKYIVSASGDRTIKVWNTSTCEFVRTL------ 292
Query: 393 QRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDS 451
             + + R +  L     L+V G + N + +WD+         E       C    I  D+
Sbjct: 293 --NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC----IRFDN 346
Query: 452 KVCFSCCSDGNIAVWDL 468
           K   S   DG I VWDL
Sbjct: 347 KRIVSGAYDGKIKVWDL 363

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 73  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIK 132
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 133 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 177 XVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIXLWNLAAKKAXY 232
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 233 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAA 285
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P   +LA S D +  F+  +D  I VW +
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 112/292 (38%), Gaps = 35/292 (11%)
Query: 136 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 195
           V VW+ +  GS + +++ D      Y+ SVK   DG  L VG     + I+D+ S T   
Sbjct: 115 VYVWN-ADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR 170
Query: 196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDIS 254
                 +   C    +S +  V  S    G I   D+      +   QGH+     +   
Sbjct: 171 TMAGHQARVGC----LSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226
Query: 255 ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 314
           +DG +L +GG DN V+ WD R    K        +KT          +  +++V   P  
Sbjct: 227 SDGLQLASGGNDNVVQIWDARSSIPKF-------TKT--------NHNAAVKAVAWCPWQ 271
Query: 315 RTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-KS 370
             L+  G  +    +  W+ A+     +     +     +L  SP SK    S+H +  +
Sbjct: 272 SNLLATGGGTMDKQIHFWNAATGA---RVNTVDAGSQVTSLIWSPHSKE-IMSTHGFPDN 327
Query: 371 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 422
            + +W  S  G      Q+D    D  +    L PDGR L       NL  W
Sbjct: 328 NLSIWSYSSSG---LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 376

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 73  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 133 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 177 MVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWNLAAKKAMY 232
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 233 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSAAA 285
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P   +LA S D +  F+  +D  I VW +
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD 297
           VR F+GH+       ++ADG    +   D T+R WD+  G          G K+ V  +D
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ---RFVGHKSDVMSVD 114
Query: 298 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD 357
             ++ + I            I G     + +W +     +  A L         + + P+
Sbjct: 115 IDKKASMI------------ISGSRDKTIKVWTIKG---QCLATLLGHNDWVSQVRVVPN 159
Query: 358 SK----SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 413
            K    S    S      VK W+++Q   +      D +  ++ I ++   PDG  +   
Sbjct: 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEA-----DFIGHNSNINTLTASPDGTLIASA 214
Query: 414 GEASNLSIWDLASPTPRIKAELTSSAP-ACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 472
           G+   + +W+LA+     KA  T SA    ++LA SP+ +   +  +   I V+ L  Q 
Sbjct: 215 GKDGEIMLWNLAAK----KAMYTLSAQDEVFSLAFSPN-RYWLAAATATGIKVFSLDPQY 269
Query: 473 LVR----QFQGHTDGAS----CIDISADGTKLWTGGLDN 503
           LV     +F G++  A      +  SADG  L+ G  DN
Sbjct: 270 LVDDLRPEFAGYSAAAEPHAVSLAWSADGQTLFAGYTDN 308

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 73  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 133 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 177 MVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWNLAAKKAMY 232
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 233 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAA 285
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P   +LA S D +  F+  +D  I VW +
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 67  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 126
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 127 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 170
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 171 MVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWNLAAKKAMY 226
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 227 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAA 279
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P   +LA S D +  F+  +D  I VW +
Sbjct: 280 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 309

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 73  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 133 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 177 MVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWNLAAKKAMY 232
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 233 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAA 285
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P   +LA S D +  F+  +D  I VW +
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 39/268 (14%)
Query: 211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVR 270
           ++ D     S   D  + +WD+      ++F GH      +DI    + + +G  D T++
Sbjct: 73  LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132
Query: 271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP------DGRTLIVGGEAS 324
            W ++  C+                   L  ++++  V+++P      D  T+I  G   
Sbjct: 133 VWTIKGQCLAT----------------LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176
Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            +  W+L     +I+A+          L  SPD      +S      + +W+++   +  
Sbjct: 177 MVKAWNL--NQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWNLAAKKAMY 232
Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL------ASPTPRIKAELTSS 438
            +S  D       + S+   P+ R  +    A+ + ++ L          P       ++
Sbjct: 233 TLSAQD------EVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAA 285
Query: 439 APACYALAISPDSKVCFSCCSDGNIAVW 466
            P   +LA S D +  F+  +D  I VW
Sbjct: 286 EPHAVSLAWSADGQTLFAGYTDNVIRVW 313

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 32/323 (9%)
Query: 164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRI-----KAELTSSAPACYALAISPDSKVC 218
           S K   D   LI G     + IW L               LT        LA+S ++   
Sbjct: 32  SQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91
Query: 219 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGC 278
            S   D  + +WDL   T  ++F GH      +  S D  ++ + G +  ++ W++   C
Sbjct: 92  ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC 151
Query: 279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSV-KLLPDGRTLIVGGEASNLSIWDLASPTPR 337
                 S    +     + C++    ++S  K+ P        G    L +W+      +
Sbjct: 152 ----KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN---TNFQ 204
Query: 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397
           I+    +       L+ISP+ K  + ++      + +WDI       P  + D     + 
Sbjct: 205 IRYTFKAHESNVNHLSISPNGK--YIATGGKDKKLLIWDILNL--TYPQREFDA---GST 257
Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLAS----PTPRIKAELTSSA-------PACYALA 446
           I  +   P  + + VG +   + I++L +    P   I+AE  + A       P C +LA
Sbjct: 258 INQIAFNPKLQWVAVGTD-QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLA 316
Query: 447 ISPDSKVCFSCCSDGNIAVWDLH 469
            +   K  F+  +DG I  +   
Sbjct: 317 WNALGKKLFAGFTDGVIRTFSFE 339

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 109/308 (35%), Gaps = 69/308 (22%)
Query: 197 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-------QGHTDGAS 249
           ++  +S  A ++   + DS V  S   D  + +W L+ +     F        GH    S
Sbjct: 21  SDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS 80
Query: 250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 309
            + +S +     +   D T+R WDLR G             T   +    Q + Y  SV 
Sbjct: 81  DLALSQENCFAISSSWDKTLRLWDLRTG-------------TTYKRFVGHQSEVY--SVA 125
Query: 310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK 369
             PD R ++  G    + +W++                 C   +   ++ S + S   Y 
Sbjct: 126 FSPDNRQILSAGAEREIKLWNILGE--------------CKFSSAEKENHSDWVSCVRYS 171
Query: 370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP 429
             +K  +  QP +              Y  SV    DGR          L +W+      
Sbjct: 172 PIMKSANKVQPFAP-------------YFASVGW--DGR----------LKVWN---TNF 203
Query: 430 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCID 488
           +I+    +       L+ISP+ K   +   D  + +WD+ N T   R+F    D  S I+
Sbjct: 204 QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF----DAGSTIN 259
Query: 489 ISADGTKL 496
             A   KL
Sbjct: 260 QIAFNPKL 267

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 141/372 (37%), Gaps = 60/372 (16%)
Query: 88  VPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISNPTKYVYTGGKG-CVKVWDISQP 144
           +P  PD ++     R+   +N +  S G V+ AV + N   Y+++   G  +++  + QP
Sbjct: 89  IPSLPDRILDAPEIRNDYYLNLVDWSSGNVL-AVALDNSV-YLWSASSGDILQLLQMEQP 146
Query: 145 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 204
           G               YI SV  + +G  L VG  ++ + +WD+     R++   + SA 
Sbjct: 147 G--------------EYISSVAWIKEGNYLAVGTSSAEVQLWDV-QQQKRLRNMTSHSAR 191
Query: 205 ACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTG 263
                ++S +S +  S    G+I   D+   +  V    GH+     +  + DG  L +G
Sbjct: 192 VG---SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 248
Query: 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGE 322
           G DN V  W            S PG    V      Q    +++V   P     L  GG 
Sbjct: 249 GNDNLVNVWP-----------SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 297
Query: 323 ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380
            S+  + IW++ S              AC +   +         S HYK  +     +Q 
Sbjct: 298 TSDRHIRIWNVCS-------------GACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 344
Query: 381 G-------SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433
                   +   V++L      + + S+ + PDG T+        L +W      P  + 
Sbjct: 345 QLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR 402
Query: 434 ELTSSAPACYAL 445
           E   ++ A  +L
Sbjct: 403 EREKASAAKSSL 414

>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP 193
           G V++W+I +  S   V++    + D+ ++++ +  DG   + GG+  ++ +WDL+    
Sbjct: 115 GAVELWEILEKES-LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV 173
Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231
                  SS   C A     D+ +  SC  DG I +WD
Sbjct: 174 LKSYNAHSSEVNCVAACPGKDT-IFLSCGEDGRILLWD 210

>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 431
           V++W+I +  S   V++    + D+ ++++ +  DG   + GG+  ++ +WDL+      
Sbjct: 117 VELWEILEKES-LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175
Query: 432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 467
                SS   C A     D+ +  SC  DG I +WD
Sbjct: 176 SYNAHSSEVNCVAACPGKDT-IFLSCGEDGRILLWD 210

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 141/372 (37%), Gaps = 60/372 (16%)
Query: 88  VPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISNPTKYVYTGGKG-CVKVWDISQP 144
           +P  PD ++     R+   +N +  S G V+ AV + N   Y+++   G  +++  + QP
Sbjct: 100 IPSLPDRILDAPEIRNDYYLNLVDWSSGNVL-AVALDNSV-YLWSASSGDILQLLQMEQP 157
Query: 145 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 204
           G               YI SV  + +G  L VG  ++ + +WD+     R++   + SA 
Sbjct: 158 G--------------EYISSVAWIKEGNYLAVGTSSAEVQLWDV-QQQKRLRNMTSHSAR 202
Query: 205 ACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTG 263
                ++S +S +  S    G+I   D+   +  V    GH+     +  + DG  L +G
Sbjct: 203 VG---SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 259
Query: 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGE 322
           G DN V  W            S PG    V      Q    +++V   P     L  GG 
Sbjct: 260 GNDNLVNVWP-----------SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 308
Query: 323 ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380
            S+  + IW++ S              AC +   +         S HYK  +     +Q 
Sbjct: 309 TSDRHIRIWNVCS-------------GACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 355
Query: 381 G-------SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433
                   +   V++L      + + S+ + PDG T+        L +W      P  + 
Sbjct: 356 QLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR 413
Query: 434 ELTSSAPACYAL 445
           E   ++ A  +L
Sbjct: 414 EREKASAAKSSL 425

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/333 (19%), Positives = 118/333 (35%), Gaps = 48/333 (14%)
Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
           G  ++ G + + L +W  ++ T +    L       ++  +  +  +  S  +D  + VW
Sbjct: 129 GNRIVSGSDDNTLKVW--SAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVW 184
Query: 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGS 289
           +      +    GHT    C+ +     ++ +G  D T+R WD+  G C+ V        
Sbjct: 185 NAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHV-------L 235
Query: 290 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC 349
              V+ + C+Q            DGR ++ G     + +WD    T      L       
Sbjct: 236 MGHVAAVRCVQ-----------YDGRRVVSGAYDFMVKVWD--PETETCLHTLQGHTNRV 282
Query: 350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT 409
           Y+L            S    + ++VWD+           +  L     + S   L D   
Sbjct: 283 YSLQFD----GIHVVSGSLDTSIRVWDVETGNC------IHTLTGHQSLTSGMELKDN-I 331
Query: 410 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS---PDSKVCFSCCSDGNIAVW 466
           L+ G   S + IWD+ +     +   T   P  +  A++    +     +   DG + +W
Sbjct: 332 LVSGNADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387
Query: 467 DLHNQTLVRQFQGHTDGAS---CIDISADGTKL 496
           DL     +R       G S      I A  TKL
Sbjct: 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 133/349 (38%), Gaps = 60/349 (17%)
Query: 88  VPFPPDALIGPGIPRHARQINTL--SHGEVVCAVTISNPTKYVYTGGKG-CVKVWDISQP 144
           +P  PD ++     R+   +N +  S G V+ AV + N   Y+++   G  +++  + QP
Sbjct: 9   IPSLPDRILDAPEIRNDYYLNLVDWSSGNVL-AVALDNSV-YLWSASSGDILQLLQMEQP 66
Query: 145 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 204
           G               YI SV  + +G  L VG  ++ + +WD+     R++   + SA 
Sbjct: 67  G--------------EYISSVAWIKEGNYLAVGTSSAEVQLWDV-QQQKRLRNMTSHSAR 111
Query: 205 ACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTG 263
                ++S +S +  S    G+I   D+   +  V    GH+     +  + DG  L +G
Sbjct: 112 VG---SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 168
Query: 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGE 322
           G DN V  W            S PG    V      Q    +++V   P     L  GG 
Sbjct: 169 GNDNLVNVWP-----------SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 217
Query: 323 ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380
            S+  + IW++ S              AC +   +         S HYK  +     +Q 
Sbjct: 218 TSDRHIRIWNVCS-------------GACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264
Query: 381 G-------SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 422
                   +   V++L      + + S+ + PDG T+        L +W
Sbjct: 265 QLVIWKYPTMAKVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLW 311

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 161/403 (39%), Gaps = 73/403 (18%)
Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL---PDGRTLIVGGEASNL 183
           +  TGG G + +++    G+KT V + D L+   +  SV  L   PDG  +        +
Sbjct: 205 FASTGGDGTIVLYN-GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263
Query: 184 SIWDLASPTPRIKAELT---SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 240
            IW++A+    +K E T    +      L I    +   S  ++G I   +    ++ + 
Sbjct: 264 KIWNVAT----LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319
Query: 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK-----VWDISQPGSKTPVS- 294
             GH    + +  SADG  L++   +  + SWD+  G        V      G KT    
Sbjct: 320 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379
Query: 295 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 354
            L  +  D+++   K++P G + +                + +  A   SS P    LA+
Sbjct: 380 DLFTVSWDDHL---KVVPAGGSGV---------------DSSKAVANKLSSQP--LGLAV 419
Query: 355 SPDSKSPFFSSHHYKSCVKVWDISQPG--SKTPVSQLDCLQRDNYIRS-VKLLPDGRTLI 411
           S D            +C K   I   G  ++ P+S         Y  S V L  D + + 
Sbjct: 420 SADGDIAV------AACYKHIAIYSHGKLTEVPIS---------YNSSCVALSNDKQFVA 464
Query: 412 VGGEASNLSIWDLA-SPTPRIK-----AELTSSA---PACYALAISPDSKVC-FSCCSDG 461
           VGG+ S + ++ L+ +    +K     AE+TS A      + +A     KV  +S  ++ 
Sbjct: 465 VGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF 524
Query: 462 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
            +A    H  +    +  HT   +C+  S D  +L TG LDN+
Sbjct: 525 ELA----HTNS----WTFHTAKVACVSWSPDNVRLATGSLDNS 559

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	504
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.98
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.98
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.97
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.97
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.96
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.95
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.95
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.94
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.94
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.94
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.94
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.94
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.93
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.93
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.92
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.92
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.92
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.92
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.92
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.9
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.9
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.9
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.89
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.89
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.87
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.87
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.86
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.83
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.82
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.81
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.81
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.8
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.8
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.8
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.8
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.8
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.79
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.78
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.78
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.78
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.78
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.77
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.75
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.75
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.75
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.75
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.74
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.74
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.73
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.72
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.72
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.72
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.71
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.7
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.68
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.68
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.68
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.67
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.66
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.65
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.65
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.62
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.61
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.6
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.59
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.58
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.56
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.55
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.53
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.53
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.52
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.52
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.52
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.5
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.49
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.49
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.49
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.48
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.48
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.48
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.47
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.47
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.47
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.46
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.46
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.46
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.44
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.39
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.36
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.35
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.33
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.31
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.31
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.26
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.24
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.22
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.21
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.21
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.18
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.16
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.16
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.13
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.12
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.09
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	99.09
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.08
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.07
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.07
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.07
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.07
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.07
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.04
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.04
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.0
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.0
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.92
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.91
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.9
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.9
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.87
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.82
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.81
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.78
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.78
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.75
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.75
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.75
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.74
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.72
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.72
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.72
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.71
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.69
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.68
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.68
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.66
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.62
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.62
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.61
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.61
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.58
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.54
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.53
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.53
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.49
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.48
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.45
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.43
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.4
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.4
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.39
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.37
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.37
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.33
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.28
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.25
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.23
3ott_A	758	Two-component system sensor histidine kinase; beta	98.23
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.21
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.2
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.19
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.15
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.13
3ott_A	758	Two-component system sensor histidine kinase; beta	98.12
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.07
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.07
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	98.04
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.02
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.02
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	98.01
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.98
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.97
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.97
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.94
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.94
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.85
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.84
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.84
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.83
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.8
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.79
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.66
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.62
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.59
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.55
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.48
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.45
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.42
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.39
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.37
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.31
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.29
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.09
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.08
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.06
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.0
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.93
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.92
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.87
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.75
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.72
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.46
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.46
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.74
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.49
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	95.07
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	94.49
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.43
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	94.0
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	92.49
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	91.1
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	90.18
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	88.67
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	87.98
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	86.42
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	83.4
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	83.39
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	82.94
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	80.62
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	80.37
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	80.23

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1e-58  Score=462.51  Aligned_cols=445  Identities=16%  Similarity=0.200  Sum_probs=350.5

Q ss_pred             CCCCCccccCCCcCcccCCC--------------CCccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCcc-ccc
Q psy17188         42 YPRPPLVGYDPHSQMRAPLG--------------PASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRH-ARQ  106 (504)
Q Consensus        42 ~~~~~~~~~~p~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~-~~~  106 (504)
                      .|.+-.++|+|+++.++...              ...+.+|  ...|.+++|+|+|+.++.+..++.+.+|+.... ...
T Consensus        18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h--~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~   95 (611)
T 1nr0_A           18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEH--SHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL   95 (611)
T ss_dssp             TTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCC--SSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred             cCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCC--CCceEEEEECCCCcEEEEEeCCCCEEEeECCCCccee
Confidence            45566788999987653221              2234455  567999999999999999999999999987543 333


Q ss_pred             eeee-cCCCcEEEEEEcCCCcEEEEec-C----CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC-EEEEecC
Q psy17188        107 INTL-SHGEVVCAVTISNPTKYVYTGG-K----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGE  179 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~  179 (504)
                      ...+ +|.+.|.+++|+|++++|++++ +    +.|++||...  ..   .  .+.+|...|++++|+|++. .|++++.
T Consensus        96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~~---~--~l~gh~~~v~~v~f~p~~~~~l~s~s~  168 (611)
T 1nr0_A           96 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--SN---G--NLTGQARAMNSVDFKPSRPFRIISGSD  168 (611)
T ss_dssp             EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--BC---B--CCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred             eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--Cc---c--eecCCCCCceEEEECCCCCeEEEEEeC
Confidence            3444 8999999999999999999876 3    3688887432  22   2  2338999999999999987 5999999


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCID  252 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~  252 (504)
                      |++|++||..+.+  ....+.+|...|.+++|+|++++|++++.|++|++||+.+++.+..+.       +|.+.|.+++
T Consensus       169 D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~  246 (611)
T 1nr0_A          169 DNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT  246 (611)
T ss_dssp             TSCEEEEETTTBE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred             CCeEEEEECCCCe--EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEE
Confidence            9999999987543  466788999999999999999999999999999999999999888884       7999999999


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCC---------------------------CCCcccceecccCCc
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGS---------------------------KTPVSQLDCLQRDNY  304 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~---------------------------~~~~~~~~~~~~~~~  304 (504)
                      |+|++++|++++.|++|++||+++++... +.......                           ...........|...
T Consensus       247 ~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~  326 (611)
T 1nr0_A          247 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA  326 (611)
T ss_dssp             ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred             ECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence            99999999999999999999999876421 11000000                           000011223468889


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee--------------------------------------------
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA--------------------------------------------  340 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--------------------------------------------  340 (504)
                      |.+++|+|++++|++++.|+.|++||+.++......                                            
T Consensus       327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~  406 (611)
T 1nr0_A          327 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV  406 (611)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred             EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence            999999999999999999999999998765321100                                            


Q ss_pred             --e----------------------------------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        341 --E----------------------------------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       341 --~----------------------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                        .                                  ...+...+.+++|+|+++  ++++++.|+.|++||+....   
T Consensus       407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~--~lasgs~D~~v~lwd~~~~~---  481 (611)
T 1nr0_A          407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ--FVAVGGQDSKVHVYKLSGAS---  481 (611)
T ss_dssp             EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC--EEEEEETTSEEEEEEEETTE---
T ss_pred             eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC--EEEEeCCCCeEEEEEccCCc---
Confidence              0                                  000223467889999998  89999999999999987532   


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                       ........|...|.+++|+|||++|++++.|++|++|++.+ ++.........|...|++++|+||+++|++++.|++|
T Consensus       482 -~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v  560 (611)
T 1nr0_A          482 -VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV  560 (611)
T ss_dssp             -EEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             -eeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence             11112246888999999999999999999999999999986 3322221234588999999999999999999999999


Q ss_pred             EEEEcCCcc-eE-EEEeec-CCceEEEEEccCCCEEEEecCCCC
Q psy17188        464 AVWDLHNQT-LV-RQFQGH-TDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       464 ~iwd~~~~~-~~-~~~~~h-~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++||+.+++ .+ ..+.+| ...|++++|+||++ |+++|.||+
T Consensus       561 ~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~  603 (611)
T 1nr0_A          561 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSN  603 (611)
T ss_dssp             EEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSC
T ss_pred             EEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCC
Confidence            999998875 33 566789 89999999999998 999999986

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.5e-58  Score=459.71  Aligned_cols=414  Identities=18%  Similarity=0.249  Sum_probs=334.1

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT  148 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~  148 (504)
                      .+.+..++|+|||+.++.+. ++.+.+|+... .+....+ +|.+.|++++|+|+|++||+++ |++|+|||+.++... 
T Consensus        18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~-~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~-   94 (611)
T 1nr0_A           18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-   94 (611)
T ss_dssp             TTCCCCCEECTTSSEEEEEE-TTEEEEEETTC-SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-
T ss_pred             cCceeEEeeCCCCCEEEeCC-CCEEEEecCCC-cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-
Confidence            45688899999999888776 45777776643 3444555 9999999999999999999999 999999998754321 


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC-EEEEEeC
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCS  223 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~  223 (504)
                        .......|.+.|.+++|+|++++|++++.+    +.|++||..  +  ....+.+|...|.+++|+|++. .|++++.
T Consensus        95 --~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~--~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~  168 (611)
T 1nr0_A           95 --LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--T--SNGNLTGQARAMNSVDFKPSRPFRIISGSD  168 (611)
T ss_dssp             --EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--C--BCBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred             --eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--C--CcceecCCCCCceEEEECCCCCeEEEEEeC
Confidence              222334789999999999999999998765    478888853  3  2456789999999999999987 6999999


Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      |++|++||..+++++..+.+|...|.+++|+|++++|++++.|++|++||+.+++.... +..       .......|..
T Consensus       169 D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~-~~~-------~~~~~~~h~~  240 (611)
T 1nr0_A          169 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV-FED-------DSLKNVAHSG  240 (611)
T ss_dssp             TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE-CBC-------TTSSSCSSSS
T ss_pred             CCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee-ecc-------ccccccccCC
Confidence            99999999999999999999999999999999999999999999999999988864211 000       0111226888


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc-----------------------------------------eeee
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI-----------------------------------------KAEL  342 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-----------------------------------------~~~~  342 (504)
                      .|.+++|+|++++|++++.|++|++||+++++...                                         ...+
T Consensus       241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~  320 (611)
T 1nr0_A          241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR  320 (611)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence            99999999999999999999999999998754221                                         1234


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc--------c--------------------------
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS--------Q--------------------------  388 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--------~--------------------------  388 (504)
                      .+|...|.+++|+|+++  ++++++.|+.|++||+..+.......        .                          
T Consensus       321 ~gh~~~v~~l~~spdg~--~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~  398 (611)
T 1nr0_A          321 YGHNKAITALSSSADGK--TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGS  398 (611)
T ss_dssp             CCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSS
T ss_pred             cCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCc
Confidence            56888999999999998  89999999999999987542110000        0                          


Q ss_pred             -------------------------------------------cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        389 -------------------------------------------LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       389 -------------------------------------------~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                                                                 .....+...+.+++|+|||++|++|+.|+.|++||+.
T Consensus       399 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~  478 (611)
T 1nr0_A          399 GVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLS  478 (611)
T ss_dssp             SSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEE
T ss_pred             cccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEcc
Confidence                                                       0000123457899999999999999999999999998


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC-cceEEE--EeecCCceEEEEEccCCCEEEEecCC
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~--~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      ++....... ..|...|++++|+||+++|++++.|++|++|++.+ ++++..  +.+|...|++++|+|||++|++||.|
T Consensus       479 ~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D  557 (611)
T 1nr0_A          479 GASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD  557 (611)
T ss_dssp             TTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECC
Confidence            654322233 56888999999999999999999999999999987 665543  34599999999999999999999999


Q ss_pred             CC
Q psy17188        503 NT  504 (504)
Q Consensus       503 gt  504 (504)
                      ++
T Consensus       558 ~~  559 (611)
T 1nr0_A          558 NS  559 (611)
T ss_dssp             SC
T ss_pred             Cc
Confidence            86

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=4.1e-53  Score=421.34  Aligned_cols=391  Identities=20%  Similarity=0.402  Sum_probs=337.3

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT  148 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~  148 (504)
                      ...+..+.++|+|+.++.+..++.+.+|+.  ..+.+..+ +|...|.+++|+|++++|++++ |+.|++||...    .
T Consensus       180 ~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~--~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~----~  253 (577)
T 2ymu_A          180 SSSVWGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----Q  253 (577)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSEEEEECT--TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS----C
T ss_pred             CcceeeeeecCCCCEEEEEcCCCEEEEEeC--CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC----C
Confidence            567889999999999988888888888874  34555666 8999999999999999999888 99999999643    2


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+.  ...+|...|.+++|+|++++|++++.|+.|++|+...   .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus       254 ~~~--~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~  328 (577)
T 2ymu_A          254 LLQ--TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK  328 (577)
T ss_dssp             EEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             EEE--EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEE
Confidence            222  2347899999999999999999999999999999753   23566788999999999999999999999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      +||+... .+..+.+|...|.+++|+|++++|++++.|+.|++||.....                ......|...|.++
T Consensus       329 ~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~----------------~~~~~~~~~~v~~~  391 (577)
T 2ymu_A          329 LWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL----------------LQTLTGHSSSVRGV  391 (577)
T ss_dssp             EEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCE----------------EEEEECCSSCEEEE
T ss_pred             EEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCE----------------EEEecCCCCCeEEE
Confidence            9997654 556788899999999999999999999999999999965433                22334677889999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      +|+|++++|++++.|+.|++||...   .....+..|...+.+++|+|+++  ++++++.|+.|++||....      ..
T Consensus       392 ~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~--~l~~~~~d~~v~~w~~~~~------~~  460 (577)
T 2ymu_A          392 AFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQ--TIASASDDKTVKLWNRNGQ------LL  460 (577)
T ss_dssp             EECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTSC------EE
T ss_pred             EECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCC--EEEEEcCCCEEEEEECCCC------EE
Confidence            9999999999999999999999643   45566778899999999999998  8999999999999996431      12


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      .....|...|.+++|+|++++|++++.|+.|++||.. ++  ....+.+|...|++++|+||+++|++++.||.|++||.
T Consensus       461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  537 (577)
T ss_dssp             EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred             EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC--EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence            2334678899999999999999999999999999964 33  34456788899999999999999999999999999995


Q ss_pred             CCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        469 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       469 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                       +++++..+.+|.+.|++++|+||+++|+|+|.||+
T Consensus       538 -~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~  572 (577)
T 2ymu_A          538 -NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT  572 (577)
T ss_dssp             -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred             -CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence             68889999999999999999999999999999986

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.2e-52  Score=416.03  Aligned_cols=399  Identities=20%  Similarity=0.385  Sum_probs=340.2

Q ss_pred             ccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeC
Q psy17188         64 SLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDI  141 (504)
Q Consensus        64 ~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~  141 (504)
                      .|.||  ...|.+++|+|||+.++.+..+..+.+|+.  ..+.+.++ +|.+.|++++|+|++++|++++ |++|+|||+
T Consensus        11 ~L~GH--~~~V~~~a~spdg~~las~~~d~~v~iWd~--~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~   86 (577)
T 2ymu_A           11 RLEAH--SSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR   86 (577)
T ss_dssp             EECCC--SSCEEEEEECTTSSCEEEEETTSEEEEECT--TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EECCC--CCcEEEEEECCCCCEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            36678  778999999999999999988888988984  45666777 8999999999999999999998 999999996


Q ss_pred             CCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc----------------------------
Q psy17188        142 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP----------------------------  193 (504)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~----------------------------  193 (504)
                      ..    ..+.  ...+|...|.+++|+|++++|++++.|+.+++|+......                            
T Consensus        87 ~~----~~~~--~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  160 (577)
T 2ymu_A           87 NG----QLLQ--TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD  160 (577)
T ss_dssp             TS----CEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             CC----CEEE--EEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccc
Confidence            43    2233  3347899999999999999999999999999999653210                            


Q ss_pred             ----------cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        194 ----------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       194 ----------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                                ........|...|.++.|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~  239 (577)
T 2ymu_A          161 KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA  239 (577)
T ss_dssp             SEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred             cceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEE
Confidence                      012233456778899999999999999999999999995 677888899999999999999999999999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.|+.|++||.....                ......|...|.+++|+|+++.|++++.|+.+++||...   .....+.
T Consensus       240 ~~d~~i~~w~~~~~~----------------~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~  300 (577)
T 2ymu_A          240 SDDKTVKLWNRNGQL----------------LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLT  300 (577)
T ss_dssp             ETTSCEEEECTTSCE----------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEEC
T ss_pred             eCCCEEEEEeCCCCE----------------EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEe
Confidence            999999999976543                223346778899999999999999999999999999654   3455677


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .|...+.+++++|+++  .+++++.|+.|++||.....      ......+...+.+++|+|++++|++++.|+.|++||
T Consensus       301 ~h~~~v~~~~~~~~~~--~l~t~~~d~~i~~w~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~  372 (577)
T 2ymu_A          301 GHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNRNGQH------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN  372 (577)
T ss_dssp             CCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTSCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cCCCCeEEEEECCCCC--EEEEEeCCCeEEEEeCCCCe------eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence            8889999999999998  79999999999999976431      122345778899999999999999999999999999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ... +  ....+..|...|++++|+||+++|++++.|+.|++||. +++.+..+.+|...|++++|+||+++|++++.|+
T Consensus       373 ~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~  448 (577)
T 2ymu_A          373 RNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK  448 (577)
T ss_dssp             TTC-C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCC-C--EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC
Confidence            643 2  34456678889999999999999999999999999995 6788889999999999999999999999999997


Q ss_pred             C
Q psy17188        504 T  504 (504)
Q Consensus       504 t  504 (504)
                      +
T Consensus       449 ~  449 (577)
T 2ymu_A          449 T  449 (577)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-50  Score=417.91  Aligned_cols=422  Identities=11%  Similarity=0.108  Sum_probs=319.7

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCc
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTP  149 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~  149 (504)
                      ...|.+++|+|+|+.++.+..++.+.+|+... .+....+.|...|.+++|+| +++|++++ |++|+|||+++++   .
T Consensus        17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~-~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~---~   91 (902)
T 2oaj_A           17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ-VEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK---V   91 (902)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSEEEEECSTT-CEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS---E
T ss_pred             CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC-cEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc---E
Confidence            56799999999999999999999999987653 34455568999999999999 88888887 9999999998753   2


Q ss_pred             eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccce---------eeeecCcCceEEEEECCC-CCEEE
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK---------AELTSSAPACYALAISPD-SKVCF  219 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~---------~~~~~~~~~v~~~~~s~~-~~~l~  219 (504)
                      +..+   .|...|++++|+|++++|++|+.||.|++||+++++....         ..+.+|...|.+++|+|+ +..|+
T Consensus        92 ~~~~---~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~  168 (902)
T 2oaj_A           92 LTTV---FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL  168 (902)
T ss_dssp             EEEE---ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred             EEEE---cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence            2322   3668899999999999999999999999999987653210         234678899999999996 46899


Q ss_pred             EEeCCCcEEEEECCCCeEEEeecCC------------------CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEE
Q psy17188        220 SCCSDGNIAVWDLHNQTLVRQFQGH------------------TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV  281 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~  281 (504)
                      +++.|+.| +||+++++.+..+..|                  ...|.+++|+|++++|++++.||+|++||+++++...
T Consensus       169 ~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~  247 (902)
T 2oaj_A          169 ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM  247 (902)
T ss_dssp             EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred             EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence            99999999 9999999998888766                  4779999999999999999999999999998876532


Q ss_pred             E-eec-----CCC---------CCCC-------------------------------cccce------------------
Q psy17188        282 W-DIS-----QPG---------SKTP-------------------------------VSQLD------------------  297 (504)
Q Consensus       282 ~-~~~-----~~~---------~~~~-------------------------------~~~~~------------------  297 (504)
                      . .+.     .+.         ....                               +..+.                  
T Consensus       248 ~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~  327 (902)
T 2oaj_A          248 ARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNY  327 (902)
T ss_dssp             EECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHH
T ss_pred             EEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhh
Confidence            1 110     000         0000                               00000                  


Q ss_pred             --------e--cccCCceEEEEEcC----------CCCEEEEEeCCCcEEEEeCCCCCccce-----ee-----------
Q psy17188        298 --------C--LQRDNYIRSVKLLP----------DGRTLIVGGEASNLSIWDLASPTPRIK-----AE-----------  341 (504)
Q Consensus       298 --------~--~~~~~~v~~~~~~~----------~~~~l~~~~~dg~i~v~d~~~~~~~~~-----~~-----------  341 (504)
                              .  ..+...+.++.+.+          +...+++++.|+.|++||+.++.....     ..           
T Consensus       328 ~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~  407 (902)
T 2oaj_A          328 YANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTS  407 (902)
T ss_dssp             HHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEE
T ss_pred             hcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEE
Confidence                    0  01133344555543          233677777888888888765421110     01           


Q ss_pred             -----------------------eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-cccccc-----c
Q psy17188        342 -----------------------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-VSQLDC-----L  392 (504)
Q Consensus       342 -----------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~-----~  392 (504)
                                             +.+|...+..++|+|+++  ++++++.|++|++||+..+..... ......     .
T Consensus       408 ~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~--~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~  485 (902)
T 2oaj_A          408 MAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT--AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK  485 (902)
T ss_dssp             EEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE--EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred             EEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc--EEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence                                   122333444556677777  899999999999999987632211 000011     2


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------------------------------------------
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------------------------------------------  429 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-------------------------------------------  429 (504)
                      .|...|.+++|+||+++||+|+.||+|++||+.+++.                                           
T Consensus       486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  565 (902)
T 2oaj_A          486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF  565 (902)
T ss_dssp             SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred             CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence            6778999999999999999999999999999976531                                           


Q ss_pred             ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE-----EEe-ecCCceEEEEEc-----cCC---CE
Q psy17188        430 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-----QFQ-GHTDGASCIDIS-----ADG---TK  495 (504)
Q Consensus       430 ~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~-~h~~~v~~~~~s-----~d~---~~  495 (504)
                      .....+..|...|++++|+||| +||+|+.|++|+|||++++..+.     .+. +|.+.|++++|+     |||   ++
T Consensus       566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~  644 (902)
T 2oaj_A          566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSIL  644 (902)
T ss_dssp             EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred             ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceE
Confidence            1234566789999999999999 99999999999999998887654     232 788999999999     885   89


Q ss_pred             EEEecCCCC
Q psy17188        496 LWTGGLDNT  504 (504)
Q Consensus       496 l~s~s~Dgt  504 (504)
                      |++|+.|||
T Consensus       645 l~sgs~D~t  653 (902)
T 2oaj_A          645 MVCGTDMGE  653 (902)
T ss_dssp             EEEEETTSE
T ss_pred             EEEEecCCc
Confidence            999999985

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.8e-49  Score=398.22  Aligned_cols=407  Identities=16%  Similarity=0.214  Sum_probs=322.5

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccc---cceeee-cCCCc-EEEEEEcC--CCcEEEEec-CCeEEEEeCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHA---RQINTL-SHGEV-VCAVTISN--PTKYVYTGG-KGCVKVWDIS  142 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~h~~~-V~~v~~s~--~~~~l~~~~-d~~i~vw~~~  142 (504)
                      .+.+.+++|+|+|+.++++. ++.+.+|+.....   +.+..+ +|.+. |++++|+|  ++++|++++ |+.|++||+.
T Consensus        18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~   96 (615)
T 1pgu_A           18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT   96 (615)
T ss_dssp             TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred             cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence            56799999999998888877 5677777766441   455555 89999 99999999  999999998 9999999996


Q ss_pred             CCCCC---CceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCC
Q psy17188        143 QPGSK---TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  215 (504)
Q Consensus       143 ~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  215 (504)
                      ++...   ..........|...|.+++|+|++++|++++.+    +.|++||..  +  ....+.+|...|.+++|+|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~--~~~~~~~~~~~v~~~~~~~~~  172 (615)
T 1pgu_A           97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--N--SLGEVSGHSQRINACHLKQSR  172 (615)
T ss_dssp             EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--C--EEEECCSCSSCEEEEEECSSS
T ss_pred             CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--C--cceeeecCCccEEEEEECCCC
Confidence            43100   011222333688999999999999999999987    689999832  2  366778999999999999999


Q ss_pred             C-EEEEEeCCCcEEEEECCCCeEEEeecCCCC---CeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCC
Q psy17188        216 K-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTD---GASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK  290 (504)
Q Consensus       216 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~  290 (504)
                      + .+++++.|+.|++||+.+++.+..+.+|..   .|.+++|+|+ +++|++++.|+.|++||+++++..          
T Consensus       173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~----------  242 (615)
T 1pgu_A          173 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL----------  242 (615)
T ss_dssp             SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE----------
T ss_pred             CcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe----------
Confidence            8 899999999999999999999999999999   9999999999 999999999999999999988742          


Q ss_pred             CCccccee-c---ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce---------------------------
Q psy17188        291 TPVSQLDC-L---QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK---------------------------  339 (504)
Q Consensus       291 ~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~---------------------------  339 (504)
                           ... .   .|...|.+++|+ ++++|++++.|+.|++||+++.+....                           
T Consensus       243 -----~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  316 (615)
T 1pgu_A          243 -----KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS  316 (615)
T ss_dssp             -----EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred             -----EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE
Confidence                 111 2   677889999999 999999999999999999886532111                           


Q ss_pred             ----------------eeeccCCCce---------------------------------eeEEECCCCCCceeeeccCCC
Q psy17188        340 ----------------AELTSSAPAC---------------------------------YALAISPDSKSPFFSSHHYKS  370 (504)
Q Consensus       340 ----------------~~~~~~~~~i---------------------------------~~~~~~~~~~~~~~~~~~~~~  370 (504)
                                      ..+..|...+                                 .++++ +++.  .+++++.|+
T Consensus       317 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~--~l~~~~~d~  393 (615)
T 1pgu_A          317 LDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQ--EYSSISWDD  393 (615)
T ss_dssp             TTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTT--CCEEEETTT
T ss_pred             CCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCc--EEEEEeCCC
Confidence                            1122233333                                 33344 2233  455556666


Q ss_pred             eEEEEecCCCCC------------------------------------------------------------CCccc---
Q psy17188        371 CVKVWDISQPGS------------------------------------------------------------KTPVS---  387 (504)
Q Consensus       371 ~i~i~d~~~~~~------------------------------------------------------------~~~~~---  387 (504)
                      .+++||+.....                                                            ...+.   
T Consensus       394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~  473 (615)
T 1pgu_A          394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFK  473 (615)
T ss_dssp             EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEE
T ss_pred             CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEE
Confidence            666665542110                                                            00000   


Q ss_pred             -----c--cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-CCCceeEEEECC----------
Q psy17188        388 -----Q--LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SAPACYALAISP----------  449 (504)
Q Consensus       388 -----~--~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~s~----------  449 (504)
                           .  .....|...|.+++|+|++++|++++.||.|++||+.+++..  ..+.. |...|++++|+|          
T Consensus       474 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~h~~~v~~~~~sp~~~~~~~~~~  551 (615)
T 1pgu_A          474 LSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK--TSRWAFRTSKINAISWKPAEKGANEEEI  551 (615)
T ss_dssp             TTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--ECCSCCCSSCEEEEEECCCC------CC
T ss_pred             CCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce--eEeecCCCCceeEEEEcCcccccccccc
Confidence                 0  233457788999999999999999999999999999977543  34555 888999999999          


Q ss_pred             CCCEEEEeeCCCcEEEEEcCCc-ceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        450 DSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       450 ~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++++|++++.||.|++||+.++ +++..+.+|.+.|++++|+||++ |++++.||+
T Consensus       552 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~  606 (615)
T 1pgu_A          552 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC  606 (615)
T ss_dssp             SCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred             CCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence            9999999999999999999998 78889999999999999999999 999999985

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=8.3e-50  Score=431.62  Aligned_cols=435  Identities=19%  Similarity=0.299  Sum_probs=352.0

Q ss_pred             cccCCCcCcccCCCC---------------CccCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-c
Q psy17188         48 VGYDPHSQMRAPLGP---------------ASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-S  111 (504)
Q Consensus        48 ~~~~p~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  111 (504)
                      ++|+|++.+++.+..               ..+.+|  ...|.+++|+|+|+.++.+..++.+.+|+.... +.+..+ +
T Consensus       621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~  697 (1249)
T 3sfz_A          621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--EDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-KLVHTYDE  697 (1249)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEEC
T ss_pred             EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--CCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-ceEEEEcC
Confidence            689999887644321               123334  678999999999999999999999999887654 455555 8


Q ss_pred             CCCcEEEEEEcC--CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        112 HGEVVCAVTISN--PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       112 h~~~V~~v~~s~--~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      |...|.+++|+|  ++.++++++ |+.|++||+.++..   ..  ...+|.+.|.+++|+|++++|++++.||.|++||+
T Consensus       698 ~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~--~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~  772 (1249)
T 3sfz_A          698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RN--TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV  772 (1249)
T ss_dssp             CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EE--EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred             CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hh--eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence            999999999999  556888888 99999999987532   22  23379999999999999999999999999999998


Q ss_pred             CCCCccce-----------------------------------------------------eeeecCcCceEEEEECCCC
Q psy17188        189 ASPTPRIK-----------------------------------------------------AELTSSAPACYALAISPDS  215 (504)
Q Consensus       189 ~~~~~~~~-----------------------------------------------------~~~~~~~~~v~~~~~s~~~  215 (504)
                      .+++....                                                     ....+|...|.+++|+|++
T Consensus       773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~  852 (1249)
T 3sfz_A          773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD  852 (1249)
T ss_dssp             GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred             CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence            65432110                                                     0112677889999999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-------------------
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-------------------  276 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-------------------  276 (504)
                      +++++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+                   
T Consensus       853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~  932 (1249)
T 3sfz_A          853 HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE  932 (1249)
T ss_dssp             TEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred             CEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence            9999999999999999999999999999999999999999999999999999999999642                   


Q ss_pred             --------------------------------------------------CceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        277 --------------------------------------------------GCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       277 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                                                                        +.+.+|+.....     .......|...|.
T Consensus       933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-----~~~~~~~h~~~v~ 1007 (1249)
T 3sfz_A          933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-----VFSSGVGHKKAVR 1007 (1249)
T ss_dssp             TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS-----CEEECCCCSSCCC
T ss_pred             CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-----eeeecccCCCceE
Confidence                                                              112222222111     1222345778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCc--------------------------------------cceeeeccCCCc
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTP--------------------------------------RIKAELTSSAPA  348 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--------------------------------------~~~~~~~~~~~~  348 (504)
                      +++|+|++++|++++.|+.|++||+.+++.                                      .....+..|...
T Consensus      1008 ~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 1087 (1249)
T 3sfz_A         1008 HIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGT 1087 (1249)
T ss_dssp             CEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSC
T ss_pred             EEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCc
Confidence            999999999999999999999998766421                                      122334557778


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                      +.+++|+|+++  ++++++.|+.|++||+........     ...|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus      1088 v~~~~~s~d~~--~l~s~s~d~~v~iwd~~~~~~~~~-----l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A         1088 VLSCAISSDAT--KFSSTSADKTAKIWSFDLLSPLHE-----LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp             CCCEEECSSSS--SCEEECCSSCCCEECSSSSSCSBC-----CCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred             EEEEEECCCCC--EEEEEcCCCcEEEEECCCcceeee-----eccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence            99999999998  789999999999999987643322     23578899999999999999999999999999999876


Q ss_pred             cceee-------cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        429 PRIKA-------ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       429 ~~~~~-------~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      .....       ....|...|++++|+||+++|++++  |.|++||+.+++.+..+..|...|++++|+||+++|++++.
T Consensus      1161 ~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~ 1238 (1249)
T 3sfz_A         1161 LLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDN 1238 (1249)
T ss_dssp             CCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECT
T ss_pred             eEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecC
Confidence            54432       1256778899999999999999885  89999999999999999999999999999999999999999


Q ss_pred             CCC
Q psy17188        502 DNT  504 (504)
Q Consensus       502 Dgt  504 (504)
                      ||+
T Consensus      1239 dg~ 1241 (1249)
T 3sfz_A         1239 LGI 1241 (1249)
T ss_dssp             TCC
T ss_pred             CcE
Confidence            985

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=6.1e-49  Score=424.85  Aligned_cols=403  Identities=18%  Similarity=0.288  Sum_probs=329.7

Q ss_pred             cCCCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCC
Q psy17188         65 LAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQ  143 (504)
Q Consensus        65 ~~~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~  143 (504)
                      +.+|  ...|.+++|+|+|+.++.+..++.+.+|+...........+|.+.|.+++|+|++++|++++ |+.|+|||+.+
T Consensus       611 ~~~h--~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~  688 (1249)
T 3sfz_A          611 VRPH--TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT  688 (1249)
T ss_dssp             ECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             Eecc--cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence            3455  67899999999999999999999998888765544333338999999999999999999998 99999999988


Q ss_pred             CCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE
Q psy17188        144 PGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  221 (504)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  221 (504)
                      +.   .+..+  .+|...|.+++|+|  ++.++++++.|+.|++||+.+++  ....+.+|...|.+++|+|++++|+++
T Consensus       689 ~~---~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~  761 (1249)
T 3sfz_A          689 GK---LVHTY--DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLASC  761 (1249)
T ss_dssp             CC---EEEEE--ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred             Cc---eEEEE--cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEEE
Confidence            63   22322  37899999999999  56689999999999999998765  366778999999999999999999999


Q ss_pred             eCCCcEEEEECCCCeEEEee-------------------------------------------------------cCCCC
Q psy17188        222 CSDGNIAVWDLHNQTLVRQF-------------------------------------------------------QGHTD  246 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~-------------------------------------------------------~~h~~  246 (504)
                      +.||.|++||+.+++....+                                                       .+|..
T Consensus       762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~  841 (1249)
T 3sfz_A          762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS  841 (1249)
T ss_dssp             ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred             ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence            99999999999877544332                                                       16778


Q ss_pred             CeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce---------------------
Q psy17188        247 GASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI---------------------  305 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------------  305 (504)
                      .|.+++|+|+++++++++.|+.|++||+.++...               .....|...|                     
T Consensus       842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~---------------~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v  906 (1249)
T 3sfz_A          842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV---------------ADCRGHLSWVHGVMFSPDGSSFLTASDDQTI  906 (1249)
T ss_dssp             CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE---------------EEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee---------------eecCCCccceEEEEECCCCCEEEEEeCCCeE
Confidence            8999999999999999999999999999887532               1122333444                     


Q ss_pred             ----------------------------------------------------------EEEEEcCCCCEEEEEeCCCcEE
Q psy17188        306 ----------------------------------------------------------RSVKLLPDGRTLIVGGEASNLS  327 (504)
Q Consensus       306 ----------------------------------------------------------~~~~~~~~~~~l~~~~~dg~i~  327 (504)
                                                                                .+++|+|+++++++++.+|.|+
T Consensus       907 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~  986 (1249)
T 3sfz_A          907 RVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIK  986 (1249)
T ss_dssp             EEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCE
T ss_pred             EEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEE
Confidence                                                                      4455555555555555555555


Q ss_pred             EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188        328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  407 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g  407 (504)
                      +||+.++  ........|...|.+++|+|+++  ++++++.|+.|++||+..+...      ....+...+.+++|+|++
T Consensus       987 i~d~~~~--~~~~~~~~h~~~v~~l~~s~dg~--~l~s~~~dg~i~vwd~~~~~~~------~~~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A          987 IIELPNN--RVFSSGVGHKKAVRHIQFTADGK--TLISSSEDSVIQVWNWQTGDYV------FLQAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp             EEETTTT--SCEEECCCCSSCCCCEEECSSSS--CEEEECSSSBEEEEETTTTEEE------CCBCCSSCEEEEEECSSS
T ss_pred             EEEcCCC--ceeeecccCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCCceE------EEecCCCcEEEEEEcCCC
Confidence            5555444  23445567888999999999998  7999999999999999875322      234678899999999976


Q ss_pred             CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEE
Q psy17188        408 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI  487 (504)
Q Consensus       408 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~  487 (504)
                       .+++++.|+.|++||+.+++...  .+..|...|++++|+|++++|++++.||.|++||+.+++.+..+.+|.+.|+++
T Consensus      1057 -~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~ 1133 (1249)
T 3sfz_A         1057 -RLLSWSFDGTVKVWNVITGRIER--DFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCS 1133 (1249)
T ss_dssp             -EEEEEESSSEEEEEETTTTCCCE--EEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEE
T ss_pred             -cEEEEECCCcEEEEECCCCceeE--EEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEE
Confidence             57788899999999999876544  456778889999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCEEEEecCCCC
Q psy17188        488 DISADGTKLWTGGLDNT  504 (504)
Q Consensus       488 ~~s~d~~~l~s~s~Dgt  504 (504)
                      +|+||+++|++++.||+
T Consensus      1134 ~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A         1134 AFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp             EECSSSSEEEEEETTSC
T ss_pred             EECCCCCEEEEEeCCCE
Confidence            99999999999999985

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-48  Score=399.31  Aligned_cols=387  Identities=12%  Similarity=0.090  Sum_probs=283.9

Q ss_pred             cceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        105 RQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       105 ~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ......+|.+.|++++|+|++++||+|+ ||.|+||+....      .......|...|.+++|+| +++|++++.|++|
T Consensus         9 ~~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v   81 (902)
T 2oaj_A            9 AETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTV   81 (902)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEE
T ss_pred             ccccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeE
Confidence            4455569999999999999999999998 999999998653      1222235788999999999 8899999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE-----------EeecCCCCCeEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-----------RQFQGHTDGASCID  252 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~h~~~v~~~~  252 (504)
                      ++||+.+++.  ...+. |...|++++|+|++++|++|+.||.|++||++++++.           ..+.+|.+.|.+++
T Consensus        82 ~lWd~~~~~~--~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~  158 (902)
T 2oaj_A           82 YVLSLYSQKV--LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ  158 (902)
T ss_dssp             EEEETTTCSE--EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred             EEEECCCCcE--EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence            9999997654  33343 6678999999999999999999999999999998764           34567999999999


Q ss_pred             EccC-CCEEEEEcCCCeEEEEECCCCceEE-EeecCC-CCCCC-cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188        253 ISAD-GTKLWTGGLDNTVRSWDLREGCVKV-WDISQP-GSKTP-VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  328 (504)
Q Consensus       253 ~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  328 (504)
                      |+|+ +..|++++.|+.| +||+++++... +....+ +.... ........|...|.+++|+|+|++|++++.|+.|++
T Consensus       159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l  237 (902)
T 2oaj_A          159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF  237 (902)
T ss_dssp             EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred             EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence            9995 5689999999999 99999887432 111000 00000 000011234577999999999999999999999999


Q ss_pred             EeCCCCCccceeee---c-------------cCCCceeeEEECC----CCCCceeeeccC--------------------
Q psy17188        329 WDLASPTPRIKAEL---T-------------SSAPACYALAISP----DSKSPFFSSHHY--------------------  368 (504)
Q Consensus       329 ~d~~~~~~~~~~~~---~-------------~~~~~i~~~~~~~----~~~~~~~~~~~~--------------------  368 (504)
                      ||+++++......+   .             .+...|.+++|++    ++.. ++++++.                    
T Consensus       238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~-ll~sg~~~~~~~~~~v~~~~~~~~~~~  316 (902)
T 2oaj_A          238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS-LLISHKSISRGDNQSLTMIDLGYTPRY  316 (902)
T ss_dssp             EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE-EEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred             EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE-EEEeCCCCCCCCCceEEEEecCCCCCc
Confidence            99988654322111   1             1234678888853    2211 3344322                    


Q ss_pred             --------------------------------------------------------CCeEEEEecCCCCCCCcc--cccc
Q psy17188        369 --------------------------------------------------------KSCVKVWDISQPGSKTPV--SQLD  390 (504)
Q Consensus       369 --------------------------------------------------------~~~i~i~d~~~~~~~~~~--~~~~  390 (504)
                                                                              |+.|++||+..+......  ....
T Consensus       317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~  396 (902)
T 2oaj_A          317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN  396 (902)
T ss_dssp             GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred             cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence                                                                    344445544322100000  0000


Q ss_pred             c----------------------------------ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce--ee-
Q psy17188        391 C----------------------------------LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--KA-  433 (504)
Q Consensus       391 ~----------------------------------~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~--~~-  433 (504)
                      .                                  ..|...+..++|+|++++|++|+.|++|++||+.++....  .. 
T Consensus       397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~  476 (902)
T 2oaj_A          397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFE  476 (902)
T ss_dssp             GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE
T ss_pred             ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEE
Confidence            0                                  1122233445667999999999999999999998874321  11 


Q ss_pred             -cc-----cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc-----------------------------------
Q psy17188        434 -EL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----------------------------------  472 (504)
Q Consensus       434 -~~-----~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~-----------------------------------  472 (504)
                       .+     .+|...|++++|+||+++||+|+.||+|+|||+.+++                                   
T Consensus       477 ~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  556 (902)
T 2oaj_A          477 VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDR  556 (902)
T ss_dssp             EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGG
T ss_pred             eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccccc
Confidence             11     2678899999999999999999999999999998762                                   


Q ss_pred             ----------eEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        473 ----------LVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       473 ----------~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                                ++..+.+|.+.|++++||||| +||+|+.|||
T Consensus       557 ~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t  597 (902)
T 2oaj_A          557 APTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS  597 (902)
T ss_dssp             CCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred             CCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence                      367788899999999999999 9999999985

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.8e-47  Score=351.86  Aligned_cols=329  Identities=66%  Similarity=1.064  Sum_probs=290.4

Q ss_pred             CCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188         69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT  148 (504)
Q Consensus        69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~  148 (504)
                      .+.+.+.+++++|||+.++++..++.++.+..+...+.+..++|.+.|++++|+|++++|++++|+.|++||+.+++...
T Consensus         7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~   86 (337)
T 1gxr_A            7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKS   86 (337)
T ss_dssp             EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCS
T ss_pred             ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCcee
Confidence            34567999999999999999999998888888888888888899999999999999999999999999999999877666


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+..+....|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|++++|++++.|+.|+
T Consensus        87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~  166 (337)
T 1gxr_A           87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  166 (337)
T ss_dssp             CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence            77766666899999999999999999999999999999999877656777888999999999999999999999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      +||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.                .....+...+.++
T Consensus       167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----------------~~~~~~~~~v~~~  230 (337)
T 1gxr_A          167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----------------LQQHDFTSQIFSL  230 (337)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----------------EEEEECSSCEEEE
T ss_pred             EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce----------------EeeecCCCceEEE
Confidence            999999999999999999999999999999999999999999999998873                2334566789999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      +|+|+++++++++.++.|++||+++.+.   ..                                               
T Consensus       231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~---~~-----------------------------------------------  260 (337)
T 1gxr_A          231 GYCPTGEWLAVGMESSNVEVLHVNKPDK---YQ-----------------------------------------------  260 (337)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTSSCE---EE-----------------------------------------------
T ss_pred             EECCCCCEEEEEcCCCcEEEEECCCCCe---EE-----------------------------------------------
Confidence            9999999999999999999999876421   00                                               


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                        ...|...+.+++|+|++++|++++.||.|++||+.+++....   ..+...+.+++|+|++++|++++.||.|++|++
T Consensus       261 --~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          261 --LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             --ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             --EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE---ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence              012456688999999999999999999999999998765533   335678999999999999999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=347.41  Aligned_cols=323  Identities=14%  Similarity=0.214  Sum_probs=251.9

Q ss_pred             ccceeee-cCCC-cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC
Q psy17188        104 ARQINTL-SHGE-VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  180 (504)
Q Consensus       104 ~~~~~~~-~h~~-~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  180 (504)
                      .+.+.++ +|.+ .|.+++|+|++++|++++ |++|+|||++++...  .......+|...|.+++|+|++++|++++.|
T Consensus         5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D   82 (345)
T 3fm0_A            5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSPCGNYLASASFD   82 (345)
T ss_dssp             EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE--EEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce--eeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence            3455666 7887 999999999999999998 999999998764211  1122234799999999999999999999999


Q ss_pred             CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEeecCCCCCeEEEEEccCC
Q psy17188        181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISADG  257 (504)
Q Consensus       181 g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~  257 (504)
                      ++|++|++..........+.+|...|.+++|+|++++|++++.|++|++||++++   +.+..+.+|...|.+++|+|++
T Consensus        83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  162 (345)
T 3fm0_A           83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ  162 (345)
T ss_dssp             SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred             CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence            9999999987765567788899999999999999999999999999999999875   4567788999999999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ++|++++.|++|++||.++++...             ......|...|.+++|+|++++|++++.|++|++||.......
T Consensus       163 ~~l~s~s~d~~i~~w~~~~~~~~~-------------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~  229 (345)
T 3fm0_A          163 ELLASASYDDTVKLYREEEDDWVC-------------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE  229 (345)
T ss_dssp             SCEEEEETTSCEEEEEEETTEEEE-------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred             CEEEEEeCCCcEEEEEecCCCEEE-------------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence            999999999999999998775321             2344568889999999999999999999999999996433211


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE-EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK-VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      ..                       +.....+.... +..+.             ..|...|.+++|+|++..|++++.|
T Consensus       230 ~~-----------------------~~~~~~~~~~~~~~~~~-------------~~h~~~v~~v~~~~~~~~l~s~~~d  273 (345)
T 3fm0_A          230 QG-----------------------VACSGSDPSWKCICTLS-------------GFHSRTIYDIAWCQLTGALATACGD  273 (345)
T ss_dssp             TC-----------------------CCCC---CEEEEEEEEC-------------SSCSSCEEEEEECTTTCCEEEEETT
T ss_pred             cc-----------------------ceeeccCCccceeEEec-------------CCCCCcEEEEEEecCCCEEEEEeCC
Confidence            10                       00000011100 00000             1256779999999999999999999


Q ss_pred             CcEEEeeCCCCCcc-------eeecccCCCCceeEEEECCCC-CEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188        417 SNLSIWDLASPTPR-------IKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       417 g~i~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~  477 (504)
                      +.|++|+.......       ......+|...|++++|+|++ .+||+|+.||+|++|++.+++....+
T Consensus       274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred             CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence            99999998754311       112245788999999999987 59999999999999999988766544

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2e-46  Score=376.13  Aligned_cols=368  Identities=17%  Similarity=0.235  Sum_probs=294.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCC-CceeeeeecCCCCc-eEEEEEcc--CCCEEEEecCCCcEEEE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSK-TPVSQLDCLQRDNY-IRSVKLLP--DGRTLIVGGEASNLSIW  186 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~-v~~~~~s~--~~~~l~~~~~dg~i~iw  186 (504)
                      .|.+.|.+++|+|++++|++++++.|+|||++++... ....  .+.+|... |++++|+|  ++++|++++.||.|++|
T Consensus        16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~--~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw   93 (615)
T 1pgu_A           16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVV--QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW   93 (615)
T ss_dssp             CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEE--EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred             CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccce--EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence            6889999999999999999999999999999865211 2222  33479999 99999999  99999999999999999


Q ss_pred             eCCCC------CccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188        187 DLASP------TPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       187 ~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                      |+.++      +......+..|...|.+++|+|++++|++++.+    +.|++||  .++.+..+.+|...|.+++|+|+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~  171 (615)
T 1pgu_A           94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS  171 (615)
T ss_dssp             EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred             eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence            99755      344566778899999999999999999999987    6788887  67788899999999999999999


Q ss_pred             CC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC---ceEEEEEcCC-CCEEEEEeCCCcEEEEeC
Q psy17188        257 GT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLPD-GRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       257 ~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~v~d~  331 (504)
                      ++ ++++++.|+.|++||+.+++.               ......|..   .|.+++|+|+ +++|++++.|+.|++||+
T Consensus       172 ~~~~l~~~~~d~~v~vwd~~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~  236 (615)
T 1pgu_A          172 RPMRSMTVGDDGSVVFYQGPPFKF---------------SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG  236 (615)
T ss_dssp             SSCEEEEEETTTEEEEEETTTBEE---------------EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred             CCcEEEEEeCCCcEEEEeCCCcce---------------eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence            97 899999999999999988764               223344666   8999999999 999999999999999999


Q ss_pred             CCCCccceeee-c---cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-------------------
Q psy17188        332 ASPTPRIKAEL-T---SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-------------------  388 (504)
Q Consensus       332 ~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------  388 (504)
                      ++++  ....+ .   .|...+.+++|+ +++  ++++++.|+.|++||++..........                   
T Consensus       237 ~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (615)
T 1pgu_A          237 KSGE--FLKYIEDDQEPVQGGIFALSWL-DSQ--KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR  311 (615)
T ss_dssp             TTCC--EEEECCBTTBCCCSCEEEEEES-SSS--EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred             CCCC--EeEEecccccccCCceEEEEEc-CCC--EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence            8874  33444 4   788899999999 776  899999999999999875421111000                   


Q ss_pred             ---------------------ccc---------------------------------ccCCCceEEEEEcCCCC------
Q psy17188        389 ---------------------LDC---------------------------------LQRDNYIRSVKLLPDGR------  408 (504)
Q Consensus       389 ---------------------~~~---------------------------------~~~~~~i~~~~~s~~g~------  408 (504)
                                           ...                                 ..|...|.+++| +++.      
T Consensus       312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~  390 (615)
T 1pgu_A          312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS  390 (615)
T ss_dssp             EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred             EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence                                 000                                 112233333343 2233      


Q ss_pred             -------------------------------------------------------------------EEEEeeC-CCcEE
Q psy17188        409 -------------------------------------------------------------------TLIVGGE-ASNLS  420 (504)
Q Consensus       409 -------------------------------------------------------------------~l~~~~~-dg~i~  420 (504)
                                                                                         +|++++. |+.|+
T Consensus       391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~  470 (615)
T 1pgu_A          391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ  470 (615)
T ss_dssp             TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred             CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence                                                                               3444444 55555


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEcc--------
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISA--------  491 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~--------  491 (504)
                      +||+.+++... ..+..|...|++++|+|++++|++++.||.|++||+.+++.+..+.+ |...|++++|+|        
T Consensus       471 ~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~  549 (615)
T 1pgu_A          471 VFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE  549 (615)
T ss_dssp             EEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------
T ss_pred             EEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccc
Confidence            55554332211 45567888999999999999999999999999999999999999888 999999999999        


Q ss_pred             --CCCEEEEecCCCC
Q psy17188        492 --DGTKLWTGGLDNT  504 (504)
Q Consensus       492 --d~~~l~s~s~Dgt  504 (504)
                        ++++|++++.||+
T Consensus       550 ~~~~~~l~~~~~dg~  564 (615)
T 1pgu_A          550 EIEEDLVATGSLDTN  564 (615)
T ss_dssp             CCSCCEEEEEETTSC
T ss_pred             ccCCCEEEEEcCCCc
Confidence              9999999999985

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=6e-46  Score=339.77  Aligned_cols=288  Identities=19%  Similarity=0.323  Sum_probs=254.5

Q ss_pred             cCCCCceEEEEEccC----CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        156 LQRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      .+|.+.|.+++|+|+    +++|++|+.|++|++|++...+......+.+|...|.+++|++++.++++++.|++|++||
T Consensus        29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd  108 (321)
T 3ow8_A           29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD  108 (321)
T ss_dssp             TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            379999999999984    6799999999999999998766555667889999999999999999999999999999999


Q ss_pred             CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                      +.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++.               ......+...+.+++|+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~---------------~~~~~~~~~~v~~~~~s  173 (321)
T 3ow8_A          109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK---------------EYSLDTRGKFILSIAYS  173 (321)
T ss_dssp             TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE---------------EEEEECSSSCEEEEEEC
T ss_pred             CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce---------------eEEecCCCceEEEEEEC
Confidence            999999999999999999999999999999999999999999998864               23334566789999999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc
Q psy17188        312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC  391 (504)
Q Consensus       312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~  391 (504)
                      |++++|++++.|+.|++||++++  .....+..|...+.+++|+|+++  ++++++.|+.|++||++.....     ...
T Consensus       174 pdg~~lasg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spd~~--~l~s~s~dg~i~iwd~~~~~~~-----~~~  244 (321)
T 3ow8_A          174 PDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHANLA-----GTL  244 (321)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCCCEEEECTTSC--EEEEECTTSCEEEEETTTCCEE-----EEE
T ss_pred             CCCCEEEEEcCCCeEEEEECCCC--cEEEEEcccCCceeEEEEcCCCC--EEEEEcCCCeEEEEECCCccee-----EEE
Confidence            99999999999999999999876  45566778889999999999998  8999999999999999865322     233


Q ss_pred             ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       392 ~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ..|...|.+++|+|++++|++++.|+.|++||+.+++  ....+..|...|.+++|+|++++|++++.||.|+|||+.
T Consensus       245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE--EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            4688899999999999999999999999999998764  444567788999999999999999999999999999963

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.5e-46  Score=352.96  Aligned_cols=300  Identities=19%  Similarity=0.374  Sum_probs=260.1

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      ..+|...|++++|+|++++|++|+.|++|++||+.+++.  ...+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus       104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~--~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~  181 (410)
T 1vyh_C          104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG  181 (410)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence            348999999999999999999999999999999997664  567889999999999999999999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      ++++..+.+|...|.+++|+|++++|++++.|++|++||++++..               ......|...+.++.++|++
T Consensus       182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~~~~~g  246 (410)
T 1vyh_C          182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC---------------VKTFTGHREWVRMVRPNQDG  246 (410)
T ss_dssp             SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE---------------EEEEECCSSCEEEEEECTTS
T ss_pred             CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEEeCCCccEEEEEECCCC
Confidence            999999999999999999999999999999999999999998874               23345678889999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      ++|++++.|+.|++||+.+.  .....+..|...+.+++|+|++....+  ....+                        
T Consensus       247 ~~l~s~s~D~~v~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~--~~~~~------------------------  298 (410)
T 1vyh_C          247 TLIASCSNDQTVRVWVVATK--ECKAELREHRHVVECISWAPESSYSSI--SEATG------------------------  298 (410)
T ss_dssp             SEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECCSCGGGGG--GGCCS------------------------
T ss_pred             CEEEEEcCCCeEEEEECCCC--ceeeEecCCCceEEEEEEcCcccccch--hhhcc------------------------
Confidence            99999999999999999876  445567788889999999998763111  10000                        


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                         ........++.+|++|+.|+.|++||++++..  ...+.+|...|++++|+|++++|++++.||.|++||+.+++++
T Consensus       299 ---~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~  373 (410)
T 1vyh_C          299 ---SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  373 (410)
T ss_dssp             ---CC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             ---ccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence               00112234688999999999999999997754  4456678889999999999999999999999999999999999


Q ss_pred             EEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        475 RQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       475 ~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+.+|...|++++|+|++++|++||.||+
T Consensus       374 ~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~  403 (410)
T 1vyh_C          374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQT  403 (410)
T ss_dssp             EEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred             EEEcCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence            999999999999999999999999999985

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=8.8e-46  Score=350.96  Aligned_cols=288  Identities=16%  Similarity=0.324  Sum_probs=253.9

Q ss_pred             eeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        107 INTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       107 ~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      ....+|.+.|++++|+|++.+|++++ |++|+|||+.++.....     ..+|...|.+++|+|++++|++|+.|++|++
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~-----l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i  176 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-----LKGHTDSVQDISFDHSGKLLASCSADMTIKL  176 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE-----EeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            33449999999999999999999998 99999999988654332     2379999999999999999999999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      ||+.+.+  ....+.+|...|.+++|+|++++|++++.|++|++||+++++++..+.+|...|.++.++|++.+|++++.
T Consensus       177 wd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~  254 (410)
T 1vyh_C          177 WDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN  254 (410)
T ss_dssp             EETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             EeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC
Confidence            9998654  45677899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--------------------CCEEEEEeCCCc
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--------------------GRTLIVGGEASN  325 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~  325 (504)
                      |++|++||+++++.               ......|...|.+++|+|+                    +.+|++++.|+.
T Consensus       255 D~~v~vwd~~~~~~---------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~  319 (410)
T 1vyh_C          255 DQTVRVWVVATKEC---------------KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT  319 (410)
T ss_dssp             TSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred             CCeEEEEECCCCce---------------eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence            99999999998865               2334567888999999996                    678999999999


Q ss_pred             EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188        326 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  405 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  405 (504)
                      |++||++++  .....+..|...|.+++|+|+++  ++++++.|+.|++||+........     ...|...|.+++|+|
T Consensus       320 i~iwd~~~~--~~~~~~~~h~~~v~~v~~~~~g~--~l~s~s~D~~i~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~  390 (410)
T 1vyh_C          320 IKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKT-----LNAHEHFVTSLDFHK  390 (410)
T ss_dssp             EEEEETTTT--EEEEEEECCSSCEEEEEECSSSS--CEEEEETTTEEEEECCTTSCCCEE-----EECCSSCEEEEEECS
T ss_pred             EEEEECCCC--ceEEEEECCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCceEEE-----EcCCCCcEEEEEEcC
Confidence            999999877  45566778899999999999998  789999999999999976543322     236788999999999


Q ss_pred             CCCEEEEeeCCCcEEEeeCC
Q psy17188        406 DGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       406 ~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ++.+|++|+.|+.|++|+++
T Consensus       391 ~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          391 TAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             SSSCEEEEETTSEEEEEC--
T ss_pred             CCCEEEEEeCCCcEEEEeCC
Confidence            99999999999999999863

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.6e-45  Score=340.62  Aligned_cols=291  Identities=19%  Similarity=0.361  Sum_probs=250.2

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +...++ +|.+.|.+++|+|++++|++++ |++|+|||+.++..   +..+  ..|...|.+++|+|++++|++++.|+.
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~---~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~  120 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK---VHAI--PLRSSWVMTCAYAPSGNYVACGGLDNI  120 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE---EEEE--ECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc---ceEe--ecCCccEEEEEECCCCCEEEEEeCCCe
Confidence            334455 8999999999999999999998 99999999987532   2222  368889999999999999999999999


Q ss_pred             EEEEeCCCCCc--cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        183 LSIWDLASPTP--RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       183 i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      |++|++.+.+.  .....+.+|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|.+.|.+++|+|++++|
T Consensus       121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  199 (340)
T 1got_B          121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF  199 (340)
T ss_dssp             EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence            99999987542  34556789999999999998874 8899999999999999999999999999999999999999999


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++++.|++|++||++++..               ......|...|.+++|+|++++|++++.|+.|++||+++.+.....
T Consensus       200 ~sg~~d~~v~~wd~~~~~~---------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~  264 (340)
T 1got_B          200 VSGACDASAKLWDVREGMC---------------RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY  264 (340)
T ss_dssp             EEEETTSCEEEEETTTCSE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             EEEeCCCcEEEEECCCCee---------------EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence            9999999999999998864               2334567888999999999999999999999999999886544333


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      ....+...+.+++|+|+++  ++++++.|+.|++||+......     .....|...|.+++|+|+|++|++|+.|+.|+
T Consensus       265 ~~~~~~~~v~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~~-----~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~  337 (340)
T 1got_B          265 SHDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRA-----GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             CCTTCCSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEE-----EEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             ccCCcccceEEEEECCCCC--EEEEECCCCeEEEEEcccCcEe-----eEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence            3334445799999999998  8999999999999998764322     22346889999999999999999999999999


Q ss_pred             Eee
Q psy17188        421 IWD  423 (504)
Q Consensus       421 iwd  423 (504)
                      +||
T Consensus       338 iWd  340 (340)
T 1got_B          338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            997

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=6.3e-46  Score=344.97  Aligned_cols=323  Identities=16%  Similarity=0.243  Sum_probs=236.4

Q ss_pred             EEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC------CCcEEEEeCCC
Q psy17188        117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLAS  190 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~iw~~~~  190 (504)
                      ..+.+.+++.++.+.++.....|++...   .      ...|+..|++++|+|||++|++++.      |+.|++|+..+
T Consensus         9 sg~d~g~~~~~~~~~g~~~~~~w~~p~~---~------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~   79 (357)
T 4g56_B            9 SGVDLGTENLYFQSNGSSKGSAWGRPVT---A------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPE   79 (357)
T ss_dssp             ----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC
T ss_pred             cCCCCCccceEEecCCCccccccCCCCC---C------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCC
Confidence            4456667777777777888899997542   1      1268999999999999999999987      77899999876


Q ss_pred             CCcc--ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe----ecCCCCCeEEEEEccCCCEEEEEc
Q psy17188        191 PTPR--IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ----FQGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       191 ~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      +...  .......|...|.+++|+|++. +++++.||+|++||+.+++....    ..+|...|.+++|+|++++|++++
T Consensus        80 ~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs  158 (357)
T 4g56_B           80 GAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG  158 (357)
T ss_dssp             ---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred             CCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence            5533  2344567888999999999985 55678899999999998865433    347999999999999999999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      .|++|++||+++++.               ......|...|.+++|++++. ++++++.|+.|++||+++++........
T Consensus       159 ~dg~v~iwd~~~~~~---------------~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~  223 (357)
T 4g56_B          159 KDFSVKVWDLSQKAV---------------LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC  223 (357)
T ss_dssp             TTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred             CCCeEEEEECCCCcE---------------EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence            999999999998875               333456788999999999874 7889999999999999988776666677


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEe
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIW  422 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iw  422 (504)
                      .+...+.+++|+|++.. ++++++.|+.|++||++......     ....+...|.+++|+|++ ++|++++.|+.|+||
T Consensus       224 ~~~~~v~~v~~sp~~~~-~la~g~~d~~i~~wd~~~~~~~~-----~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw  297 (357)
T 4g56_B          224 ASDTIPTSVTWHPEKDD-TFACGDETGNVSLVNIKNPDSAQ-----TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL  297 (357)
T ss_dssp             TCCSCEEEEEECTTSTT-EEEEEESSSCEEEEESSCGGGCE-----EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred             cccccccchhhhhcccc-eEEEeecccceeEEECCCCcEeE-----EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence            77888999999998765 78899999999999998754322     234578889999999987 579999999999999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      |+++++...   ..+|...|++++|+| |+++|++++.||+|++|++.+...
T Consensus       298 d~~~~~~~~---~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~  346 (357)
T 4g56_B          298 DADFSEVFR---DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR  346 (357)
T ss_dssp             CTTSCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred             ECCCCcEeE---ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence            998775432   347889999999998 899999999999999999976433

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.1e-44  Score=334.97  Aligned_cols=282  Identities=20%  Similarity=0.341  Sum_probs=246.7

Q ss_pred             eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        154 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+.+|.+.|.+++|+|++++|++++.|++|++||+.+++.  ...+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus        50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~  127 (340)
T 1got_B           50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK  127 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE--EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc--ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence            3448999999999999999999999999999999987653  56678899999999999999999999999999999998


Q ss_pred             CC----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        234 NQ----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       234 ~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      ++    +....+.+|.+.|.++.|++++ .+++++.|++|++||+++++.               ......|...|.+++
T Consensus       128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~  191 (340)
T 1got_B          128 TREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ---------------TTTFTGHTGDVMSLS  191 (340)
T ss_dssp             TCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEE
T ss_pred             cCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE---------------EEEEcCCCCceEEEE
Confidence            75    4667788999999999999877 589999999999999998874               233456788999999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      |+|+++++++++.|+.|++||++++...  ..+                                               
T Consensus       192 ~~~~~~~l~sg~~d~~v~~wd~~~~~~~--~~~-----------------------------------------------  222 (340)
T 1got_B          192 LAPDTRLFVSGACDASAKLWDVREGMCR--QTF-----------------------------------------------  222 (340)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTTCSEE--EEE-----------------------------------------------
T ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCeeE--EEE-----------------------------------------------
Confidence            9999999999999999999998765211  110                                               


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                        ..|...|.+++|+|++++|++++.|+.|++||+++++.........+...|++++|+|++++|++|+.||.|++||+.
T Consensus       223 --~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~  300 (340)
T 1got_B          223 --TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             --CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             --cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence              134566889999999999999999999999999877655555444555679999999999999999999999999999


Q ss_pred             CcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        470 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       470 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +++.+..+.+|.+.|.+++|+||+++|++||.||+
T Consensus       301 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~  335 (340)
T 1got_B          301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF  335 (340)
T ss_dssp             TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred             cCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence            99999999999999999999999999999999986

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=8.4e-45  Score=330.16  Aligned_cols=286  Identities=17%  Similarity=0.329  Sum_probs=251.2

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|++|++||+
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            46678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      .+++.               ......|...|.+++|+|++++|++++.|++|++||+++.. .....+..|...|.+++|
T Consensus        85 ~~~~~---------------~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~  148 (304)
T 2ynn_A           85 NTGEK---------------VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAF  148 (304)
T ss_dssp             TTCCE---------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEE
T ss_pred             CCCcE---------------EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEE
Confidence            98874               33445788999999999999999999999999999998653 344567788999999999


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      +|++.. .+++++.|+.|++||++........    ...+...+..+.|+|  ++.+|++++.|+.|++||+++++  ..
T Consensus       149 ~p~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~--~~  221 (304)
T 2ynn_A          149 NPKDPS-TFASGCLDRTVKVWSLGQSTPNFTL----TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS--CV  221 (304)
T ss_dssp             CTTCTT-EEEEEETTSEEEEEETTCSSCSEEE----ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE--EE
T ss_pred             CCCCCC-EEEEEeCCCeEEEEECCCCCcccee----ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc--cc
Confidence            995433 7999999999999999765332221    123556788999987  78899999999999999999764  44


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC--EEEEecCCC
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT--KLWTGGLDN  503 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~--~l~s~s~Dg  503 (504)
                      ..+.+|...|.+++|+|++++|++++.||.|++||+.+++++..+..|...+++++|+|+++  ++++|+.||
T Consensus       222 ~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g  294 (304)
T 2ynn_A          222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG  294 (304)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred             eeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence            55678899999999999999999999999999999999999999999999999999999875  688888886

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2.2e-45  Score=380.61  Aligned_cols=401  Identities=15%  Similarity=0.239  Sum_probs=323.3

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKT  148 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~  148 (504)
                      .++|.+++|+|+|+.++++..++.+.+|+.... +.+..+ +|...|.+++|+|++++|++++ |+.|++||+.+++.  
T Consensus        13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~--   89 (814)
T 3mkq_A           13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK--   89 (814)
T ss_dssp             CSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE--
T ss_pred             CCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--
Confidence            668999999999999999999988888876554 444455 8999999999999999999988 99999999987632  


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNI  227 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i  227 (504)
                       +..  ...|...|.+++|+|++++|++++.|+.|++||+.++. .....+.+|...|.+++|+| +++.|++++.||.|
T Consensus        90 -~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v  165 (814)
T 3mkq_A           90 -VVD--FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (814)
T ss_dssp             -EEE--EECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred             -EEE--EecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence             222  23789999999999999999999999999999998653 34566788999999999999 88899999999999


Q ss_pred             EEEECCCCeEEEeecCCC-CCeEEEEEcc--CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        228 AVWDLHNQTLVRQFQGHT-DGASCIDISA--DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~~h~-~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      ++||+.+++....+..+. ..+.+++|+|  ++.+|++++.||.|++||+.+++.               ......|...
T Consensus       166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---------------~~~~~~~~~~  230 (814)
T 3mkq_A          166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC---------------VATLEGHMSN  230 (814)
T ss_dssp             EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE---------------EEEEECCSSC
T ss_pred             EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE---------------EEEEcCCCCC
Confidence            999999887777776554 8999999999  999999999999999999998864               2333457788


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      +.+++|+|++++|++++.||.|++||+.+.  .....+..+...+.+++|+|++...+++++ .++.+.+|++.......
T Consensus       231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  307 (814)
T 3mkq_A          231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTY--KVEKTLNVGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGNDEPTL  307 (814)
T ss_dssp             EEEEEECSSSSEEEEEETTSCEEEEETTTC--SEEEEECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCCSCCE
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEeecCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCCCcee
Confidence            999999999999999999999999999876  455566777789999999999986445554 46678888875432111


Q ss_pred             ccc--------------------------------------ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        385 PVS--------------------------------------QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       385 ~~~--------------------------------------~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      .+.                                      ......+...+.+++|+|+|+++++++ ++.+.+|++..
T Consensus       308 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~  386 (814)
T 3mkq_A          308 SLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALA  386 (814)
T ss_dssp             EECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred             EECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcc
Confidence            000                                      001122344678999999999999987 88999998753


Q ss_pred             CCc-----------------c----------eeecccCCCCceeEEEECCCC---CEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188        427 PTP-----------------R----------IKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       427 ~~~-----------------~----------~~~~~~~~~~~v~~l~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      ...                 .          ....+.++...+.++.|+|++   ++|++++.|+.|++||+.+++.+..
T Consensus       387 ~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~  466 (814)
T 3mkq_A          387 WRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRR  466 (814)
T ss_dssp             TEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEE
T ss_pred             ccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEE
Confidence            211                 0          001223455567778889988   6888888899999999999999988


Q ss_pred             EeecCCceEEEEEccCCCEEEEec
Q psy17188        477 FQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       477 ~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      +..|..   .+.|+|||++|++++
T Consensus       467 ~~~~~~---~v~~s~dg~~la~~~  487 (814)
T 3mkq_A          467 IDVNAK---DVIWSDNGELVMIVN  487 (814)
T ss_dssp             ESSCEE---EEEECTTSSEEEEEE
T ss_pred             EecCCC---EEEEcCCCCEEEEEE
Confidence            887764   899999999999994

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.9e-45  Score=333.23  Aligned_cols=286  Identities=20%  Similarity=0.325  Sum_probs=249.1

Q ss_pred             cCCCcEEEEEEcCC----CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEE
Q psy17188        111 SHGEVVCAVTISNP----TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  185 (504)
Q Consensus       111 ~h~~~V~~v~~s~~----~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  185 (504)
                      +|.+.|.+++|+|+    +++|++|+ |++|+||++..+.   ........+|...|.+++|++++.++++++.|++|++
T Consensus        30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~---~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l  106 (321)
T 3ow8_A           30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER---LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL  106 (321)
T ss_dssp             SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE---EEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred             cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC---eeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence            89999999999974    67899988 9999999987632   2223345589999999999999999999999999999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      ||+.+++.  ...+..+...+.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.
T Consensus       107 Wd~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~  184 (321)
T 3ow8_A          107 WDLENGKQ--IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI  184 (321)
T ss_dssp             EETTTTEE--EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred             EECCCCCE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence            99987653  5566778888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      |+.|++||+++++.               ......|...|.+++|+|++++|++++.|+.|++||+++.  .....+..|
T Consensus       185 dg~i~iwd~~~~~~---------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h  247 (321)
T 3ow8_A          185 DGIINIFDIATGKL---------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--NLAGTLSGH  247 (321)
T ss_dssp             TSCEEEEETTTTEE---------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--CEEEEECCC
T ss_pred             CCeEEEEECCCCcE---------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--ceeEEEcCC
Confidence            99999999998874               2233467788999999999999999999999999999876  445677889


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ...|.+++|+|+++  ++++++.|+.|++||+++....     .....|...|.+++|+|++++|++++.|+.|++||..
T Consensus       248 ~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~~~-----~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          248 ASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRTCV-----HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             SSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEE-----EEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCEEE-----EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            99999999999998  8999999999999999764322     2234678899999999999999999999999999963

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.4e-45  Score=346.30  Aligned_cols=307  Identities=20%  Similarity=0.332  Sum_probs=250.4

Q ss_pred             cccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC
Q psy17188        103 HARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  180 (504)
Q Consensus       103 ~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  180 (504)
                      .......+ +|.+.|++++|+|++++|++++ |++|+|||+.++..   ..  ....|...|.+++|+|++++|++|+.|
T Consensus        55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~---~~--~~~~h~~~v~~~~~s~~g~~las~~~d  129 (380)
T 3iz6_a           55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK---TH--AIKLHCPWVMECAFAPNGQSVACGGLD  129 (380)
T ss_dssp             CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EE--EEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred             eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---ce--EEecCCCCEEEEEECCCCCEEEEeeCC
Confidence            34455556 9999999999999999999998 99999999987532   22  233788999999999999999999999


Q ss_pred             CcEEEEeCCCCC-----ccceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEee-----cCCCCCeE
Q psy17188        181 SNLSIWDLASPT-----PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF-----QGHTDGAS  249 (504)
Q Consensus       181 g~i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~  249 (504)
                      +.+++|++.+..     ......+.+|...|.++.|+|++ ..|++++.|++|++||+.+++.+..+     .+|...|.
T Consensus       130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~  209 (380)
T 3iz6_a          130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL  209 (380)
T ss_dssp             SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred             CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence            999999987532     22345678999999999999964 57999999999999999999988877     67999999


Q ss_pred             EEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE
Q psy17188        250 CIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  328 (504)
Q Consensus       250 ~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v  328 (504)
                      +++|++ ++++|++|+.|++|++||++.....              ......|...|.+++|+|++++|++++.|++|++
T Consensus       210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~--------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~l  275 (380)
T 3iz6_a          210 SLSINSLNANMFISGSCDTTVRLWDLRITSRA--------------VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRL  275 (380)
T ss_dssp             EEEECSSSCCEEEEEETTSCEEEEETTTTCCC--------------CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEE
T ss_pred             EEEeecCCCCEEEEEECCCeEEEEECCCCCcc--------------eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEE
Confidence            999987 8889999999999999999743210              2334568889999999999999999999999999


Q ss_pred             EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188        329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  408 (504)
Q Consensus       329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~  408 (504)
                      ||+++++...                                   .+......         ...+...+.+++|+|+|+
T Consensus       276 wd~~~~~~~~-----------------------------------~~~~~~~~---------~~~~~~~v~~~~~s~~g~  311 (380)
T 3iz6_a          276 FDMRTGHQLQ-----------------------------------VYNREPDR---------NDNELPIVTSVAFSISGR  311 (380)
T ss_dssp             EETTTTEEEE-----------------------------------EECCCCSS---------SCCSSCSCSEEEECSSSS
T ss_pred             EECCCCcEEE-----------------------------------Eecccccc---------cccccCceEEEEECCCCC
Confidence            9998763211                                   11100000         001223467999999999


Q ss_pred             EEEEeeCCCcEEEeeCCCCCcceeec--ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        409 TLIVGGEASNLSIWDLASPTPRIKAE--LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       409 ~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      +|++|+.||.|++||+..++......  ..+|...|++++|+||+++|++|+.|++|+||++...+
T Consensus       312 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          312 LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            99999999999999998776544332  25788899999999999999999999999999997654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=9.6e-45  Score=334.09  Aligned_cols=293  Identities=16%  Similarity=0.228  Sum_probs=238.3

Q ss_pred             cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCC-------CCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQ-------PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      .|...|.+++|+|||++|++++|+++++||...       ...... .......++..|.+++|+|++ .|++|+.||+|
T Consensus        28 ~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v  105 (344)
T 4gqb_B           28 CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEG-FCSAGVQTEAGVADLTWVGER-GILVASDSGAV  105 (344)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGG-GCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred             cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcc-eeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence            466789999999999999999988888887321       000011 111222467789999999985 68899999999


Q ss_pred             EEEeCCCCCccce--eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188        184 SIWDLASPTPRIK--AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l  260 (504)
                      +|||+.+++....  ....+|...|++++|+|++++|++++.|++|++||+++++++..+.+|...|.+++|++++. +|
T Consensus       106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l  185 (344)
T 4gqb_B          106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF  185 (344)
T ss_dssp             EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred             EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence            9999998765433  34568999999999999999999999999999999999999999999999999999999874 78


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      ++++.|++|++||+++++...             .+....+...+.+++|+| ++++|++++.|+.|++||+++++  ..
T Consensus       186 ~s~s~D~~v~iwd~~~~~~~~-------------~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~--~~  250 (344)
T 4gqb_B          186 LSCSEDNRILLWDTRCPKPAS-------------QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS--CV  250 (344)
T ss_dssp             EEEETTSCEEEEETTSSSCEE-------------ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CC
T ss_pred             eeeccccccccccccccceee-------------eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc--EE
Confidence            999999999999999876321             233344556789999999 45788999999999999999874  45


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCc
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASN  418 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~  418 (504)
                      ..+..|...|.+++|+|++.. ++++++.|+.|++||++.++      ......|...|++++|+|+++ +|++++.|++
T Consensus       251 ~~~~~h~~~v~~v~fsp~g~~-~lasgs~D~~i~vwd~~~~~------~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~  323 (344)
T 4gqb_B          251 LSSAVHSQCVTGLVFSPHSVP-FLASLSEDCSLAVLDSSLSE------LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ  323 (344)
T ss_dssp             EEEECCSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTCCE------EEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred             EEEcCCCCCEEEEEEccCCCe-EEEEEeCCCeEEEEECCCCc------EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe
Confidence            667889999999999999864 78999999999999987642      223457899999999999986 5778999999


Q ss_pred             EEEeeCCCC
Q psy17188        419 LSIWDLASP  427 (504)
Q Consensus       419 i~iwd~~~~  427 (504)
                      |++|++.+.
T Consensus       324 v~~w~v~~~  332 (344)
T 4gqb_B          324 VVHHVVPTE  332 (344)
T ss_dssp             EEEEECCC-
T ss_pred             EEEEECCCC
Confidence            999999864

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.8e-44  Score=334.91  Aligned_cols=291  Identities=19%  Similarity=0.377  Sum_probs=248.6

Q ss_pred             ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ....+ +|.+.|++++|+|++++|++++ |++|+|||..++..   ...  ...|...|.+++|+|++++|++++.|+.+
T Consensus        56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~---~~~--~~~~~~~v~~~~~sp~g~~lasg~~d~~i  130 (354)
T 2pbi_B           56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---EHA--VTMPCTWVMACAYAPSGCAIACGGLDNKC  130 (354)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEE--EECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred             EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc---ceE--EecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence            34455 9999999999999999999999 99999999877532   222  22577889999999999999999999999


Q ss_pred             EEEeCCCCC----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc--CC
Q psy17188        184 SIWDLASPT----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA--DG  257 (504)
Q Consensus       184 ~iw~~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~  257 (504)
                      ++|++....    ......+..|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|+|  ++
T Consensus       131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g  210 (354)
T 2pbi_B          131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG  210 (354)
T ss_dssp             EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred             EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence            999986532    234556778999999999999999999999999999999999999999999999999999988  56


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      ++|++++.||+|++||+++++.               ......|...|.+++|+|++++|++++.|++|++||++.....
T Consensus       211 ~~l~sgs~Dg~v~~wd~~~~~~---------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~  275 (354)
T 2pbi_B          211 NTFVSGGCDKKAMVWDMRSGQC---------------VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV  275 (354)
T ss_dssp             CEEEEEETTSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcE---------------EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            8999999999999999998874               2334567889999999999999999999999999999876443


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                      .......+...+.+++|+|++.  ++++++.|+.|++||+..+...     .....|...|.+++|+|+|++|++++.|+
T Consensus       276 ~~~~~~~~~~~~~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~~-----~~l~~h~~~v~~l~~spdg~~l~sgs~D~  348 (354)
T 2pbi_B          276 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSRV-----SILFGHENRVSTLRVSPDGTAFCSGSWDH  348 (354)
T ss_dssp             EEECCTTCCSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCSEE-----EEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred             EEEcCCCcccceeEEEEeCCCC--EEEEEECCCcEEEEECCCCceE-----EEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence            3333333445788999999998  8999999999999999765322     22346889999999999999999999999


Q ss_pred             cEEEee
Q psy17188        418 NLSIWD  423 (504)
Q Consensus       418 ~i~iwd  423 (504)
                      .|++|+
T Consensus       349 ~v~vW~  354 (354)
T 2pbi_B          349 TLRVWA  354 (354)
T ss_dssp             EEEEEC
T ss_pred             CEEecC
Confidence            999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.5e-44  Score=335.76  Aligned_cols=293  Identities=17%  Similarity=0.284  Sum_probs=237.9

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      .|+..|++++|||||++|++++       |+.|++|+..++.....+. ....+|...|.+++|+|++++ ++++.||+|
T Consensus        40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v  117 (357)
T 4g56_B           40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKGI-LVASDSGAV  117 (357)
T ss_dssp             CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTEE-EEEETTSCE
T ss_pred             cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCCE-EEEECCCEE
Confidence            6999999999999999999987       4679999987764433332 223368889999999999865 456789999


Q ss_pred             EEEeCCCCCccc--eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188        184 SIWDLASPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL  260 (504)
Q Consensus       184 ~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l  260 (504)
                      +|||+.+++...  .....+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|++++. ++
T Consensus       118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~  197 (357)
T 4g56_B          118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF  197 (357)
T ss_dssp             EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred             EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence            999998766433  234557899999999999999999999999999999999999999999999999999999875 78


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      ++++.|++|++||+++++..             .......+...+.+++|+|+ +.+|++++.|+.|++||++++  ...
T Consensus       198 ~s~~~dg~v~~wd~~~~~~~-------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--~~~  262 (357)
T 4g56_B          198 LSCGEDGRILLWDTRKPKPA-------------TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--DSA  262 (357)
T ss_dssp             EEEETTSCEEECCTTSSSCB-------------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--GGC
T ss_pred             eeeccCCceEEEECCCCcee-------------eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC--cEe
Confidence            99999999999999987631             13334456778999999997 568899999999999999876  455


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCc
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASN  418 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~  418 (504)
                      ..+..+...|.+++|+|++.. ++++++.|+.|++||++..+      ......|...|++++|+| ++++|++++.||.
T Consensus       263 ~~~~~~~~~v~~l~~sp~~~~-~lasgs~D~~i~iwd~~~~~------~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~  335 (357)
T 4g56_B          263 QTSAVHSQNITGLAYSYHSSP-FLASISEDCTVAVLDADFSE------VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK  335 (357)
T ss_dssp             EEECCCSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTSCE------EEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred             EEEeccceeEEEEEEcCCCCC-EEEEEeCCCEEEEEECCCCc------EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence            667788889999999999865 78899999999999987642      223346889999999998 8999999999999


Q ss_pred             EEEeeCCCC
Q psy17188        419 LSIWDLASP  427 (504)
Q Consensus       419 i~iwd~~~~  427 (504)
                      |++|++.+.
T Consensus       336 v~iW~~~~~  344 (357)
T 4g56_B          336 VLHHHLPSE  344 (357)
T ss_dssp             EEEEECC--
T ss_pred             EEEEECCCC
Confidence            999999754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2.5e-44  Score=329.25  Aligned_cols=296  Identities=18%  Similarity=0.342  Sum_probs=239.9

Q ss_pred             cceeee-cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188        105 RQINTL-SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  181 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  181 (504)
                      ....++ +|.+.|++++|+|++ ++|++++ |++|++|++.............+.+|...|.+++|+|++++|++++.|+
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~   87 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK   87 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence            344455 899999999999965 8899888 9999999987543222222334458999999999999999999999999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC-----
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD-----  256 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-----  256 (504)
                      +|++||+.+++  ....+.+|...|.+++|+|++++|++++.|++|++||++ ++.+..+.+|...|.++.|.|.     
T Consensus        88 ~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~  164 (319)
T 3frx_A           88 TLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD  164 (319)
T ss_dssp             EEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred             EEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence            99999998765  366788999999999999999999999999999999986 5567788899999999999984     


Q ss_pred             -CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC
Q psy17188        257 -GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  335 (504)
Q Consensus       257 -~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~  335 (504)
                       +..|++++.|+.|++||+++.+.               ......|...|.+++|+|++++|++++.|+.|++||+.+.+
T Consensus       165 ~~~~l~s~~~d~~i~~wd~~~~~~---------------~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~  229 (319)
T 3frx_A          165 DSVTIISAGNDKMVKAWNLNQFQI---------------EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK  229 (319)
T ss_dssp             -CCEEEEEETTSCEEEEETTTTEE---------------EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred             CccEEEEEeCCCEEEEEECCcchh---------------heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence             44899999999999999998764               33445788899999999999999999999999999998652


Q ss_pred             ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC
Q psy17188        336 PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  415 (504)
Q Consensus       336 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~  415 (504)
                      ..  ..+                                                  .....|.+++|+|++.+|++++.
T Consensus       230 ~~--~~~--------------------------------------------------~~~~~v~~~~~sp~~~~la~~~~  257 (319)
T 3frx_A          230 AM--YTL--------------------------------------------------SAQDEVFSLAFSPNRYWLAAATA  257 (319)
T ss_dssp             EE--EEE--------------------------------------------------ECCSCEEEEEECSSSSEEEEEET
T ss_pred             EE--EEe--------------------------------------------------cCCCcEEEEEEcCCCCEEEEEcC
Confidence            11  110                                                  01234668899999988888765


Q ss_pred             CCcEEEeeCCCCCcceeec------ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        416 ASNLSIWDLASPTPRIKAE------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~------~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      + .+++|++..........      ...+...+.+++|+|||++|++|+.||.|+|||+.++
T Consensus       258 ~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          258 T-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             T-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             C-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            4 48999887543322221      1234556889999999999999999999999998764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.2e-44  Score=325.57  Aligned_cols=289  Identities=19%  Similarity=0.352  Sum_probs=238.7

Q ss_pred             eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEE
Q psy17188        107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  184 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  184 (504)
                      ..++ +|.+.|.+++|+|++++|++++ |++|++||++++.   .+..  ...|...|.+++|+|++++|++|+.|++|+
T Consensus         6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~--~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~   80 (304)
T 2ynn_A            6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRS--IQVTETPVRAGKFIARKNWIIVGSDDFRIR   80 (304)
T ss_dssp             EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEE--EECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred             EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEE--eeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence            3445 8999999999999999999998 9999999998753   2222  236889999999999999999999999999


Q ss_pred             EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEcc-CCCEEEE
Q psy17188        185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISA-DGTKLWT  262 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s  262 (504)
                      +||+.+++.  ...+.+|...|.+++|+|++++|++++.|++|++||++++ .....+.+|...|.+++|+| ++.+|++
T Consensus        81 vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s  158 (304)
T 2ynn_A           81 VFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS  158 (304)
T ss_dssp             EEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred             EEECCCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence            999997653  6678899999999999999999999999999999999887 66678899999999999999 6789999


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++.|++|++||++++...              ......+...+..+.|+|  ++++|++++.|+.|++||+++++.  ..
T Consensus       159 gs~D~~v~iwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~--~~  222 (304)
T 2ynn_A          159 GCLDRTVKVWSLGQSTPN--------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC--VA  222 (304)
T ss_dssp             EETTSEEEEEETTCSSCS--------------EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE--EE
T ss_pred             EeCCCeEEEEECCCCCcc--------------ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc--ce
Confidence            999999999999876521              111223456788888886  678999999999999999876521  11


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      .+                                                 ..|...|.+++|+|++++|++++.||.|+
T Consensus       223 ~~-------------------------------------------------~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~  253 (304)
T 2ynn_A          223 TL-------------------------------------------------EGHMSNVSFAVFHPTLPIIISGSEDGTLK  253 (304)
T ss_dssp             EE-------------------------------------------------ECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred             ee-------------------------------------------------CCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence            11                                                 13556688999999999999999999999


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCC--EEEEeeCCCcEEEEEcCC
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~--~l~s~~~dg~i~iwd~~~  470 (504)
                      +||+++++..  ..+..+...+.+++|+|++.  ++++|+.|| +.+|++.+
T Consensus       254 iWd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          254 IWNSSTYKVE--KTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             EEETTTCCEE--EEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred             EEECCCCcee--eeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence            9999977544  44566778899999999875  577777666 78888765

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-44  Score=342.77  Aligned_cols=335  Identities=15%  Similarity=0.213  Sum_probs=270.8

Q ss_pred             CCCCCccccceeeecCCCcEEEEEEcCCCc-EEEEec-CCeEEEEeC----CCCCCCC---ceeeee--e------cCCC
Q psy17188         97 GPGIPRHARQINTLSHGEVVCAVTISNPTK-YVYTGG-KGCVKVWDI----SQPGSKT---PVSQLD--C------LQRD  159 (504)
Q Consensus        97 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~----~~~~~~~---~~~~~~--~------~~~~  159 (504)
                      .+......+.+....|.+.|++++|+|+++ +|++++ |+.|++|++    .++....   ....+.  .      .+|.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (425)
T 1r5m_A           29 SDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT  108 (425)
T ss_dssp             -----CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C
T ss_pred             cccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC
Confidence            344444455556668889999999999999 999988 999999999    7654210   111111  1      1257


Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~  239 (504)
                      +.|++++|+|++++|++++.|+.|++||..   ......+..|...|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus       109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  185 (425)
T 1r5m_A          109 NQVTCLAWSHDGNSIVTGVENGELRLWNKT---GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ  185 (425)
T ss_dssp             BCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred             CceEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence            799999999999999999999999999933   23466778899999999999999999999999999999999999999


Q ss_pred             eecCCCCC---------------eEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        240 QFQGHTDG---------------ASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       240 ~~~~h~~~---------------v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      .+..+...               +.+++|++++ .+++++.|+.|++||+++++.               ......+...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~---------------~~~~~~~~~~  249 (425)
T 1r5m_A          186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTP---------------TGKLIGHHGP  249 (425)
T ss_dssp             EECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSC---------------SEEECCCSSC
T ss_pred             EeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCce---------------eeeeccCCCc
Confidence            99888777               9999999975 689999999999999998753               2333467788


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      +.+++|+|++++|++++.|+.|++||+++.+...  .+                                          
T Consensus       250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~------------------------------------------  285 (425)
T 1r5m_A          250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN--CF------------------------------------------  285 (425)
T ss_dssp             EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE--EE------------------------------------------
T ss_pred             eEEEEECCCCCEEEEEcCCCEEEEEECCCCccce--Ee------------------------------------------
Confidence            9999999999999999999999999987642110  00                                          


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  464 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~  464 (504)
                             ..+...|.+++|+|++ ++++++.|+.|++||+++++.  ...+..|...+.+++|+|++++|++++.||.|+
T Consensus       286 -------~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~  355 (425)
T 1r5m_A          286 -------YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL--LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN  355 (425)
T ss_dssp             -------CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE--EEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             -------cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE--eEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence                   1245567899999999 999999999999999987654  344556778899999999999999999999999


Q ss_pred             EEEcCCcc--------------------eEEEEeecCC--ceEEEEEccCCCEEEEecCCCC
Q psy17188        465 VWDLHNQT--------------------LVRQFQGHTD--GASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       465 iwd~~~~~--------------------~~~~~~~h~~--~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +||+.+++                    .+..+..|..  .|++++|+|++++|++++.||+
T Consensus       356 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  417 (425)
T 1r5m_A          356 VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE  417 (425)
T ss_dssp             EEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred             EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence            99999988                    8899999976  9999999999999999999985

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.6e-43  Score=328.52  Aligned_cols=294  Identities=18%  Similarity=0.312  Sum_probs=254.8

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....+.+|...|++++|+|++++|++++.|++|++||..+++....+..|...|.+++|+|++..|++++.|+.+++|++
T Consensus        56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~  135 (354)
T 2pbi_B           56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL  135 (354)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred             EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      ......         ...........|...|.+++|+|+++.|++++.|++|++||++++  .....+..|...+.++++
T Consensus       136 ~~~~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~~~~  204 (354)
T 2pbi_B          136 TFDKNE---------NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--QLLQSFHGHGADVLCLDL  204 (354)
T ss_dssp             CCCTTC---------CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEE
T ss_pred             eccccc---------cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEcCCCCCeEEEEE
Confidence            754210         001112334468889999999999999999999999999999887  455667788889999999


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~  434 (504)
                      +|+....++++++.|+.|++||++.....     .....|...|.+++|+|++.+|++++.|+.|++||++..+......
T Consensus       205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~  279 (354)
T 2pbi_B          205 APSETGNTFVSGGCDKKAMVWDMRSGQCV-----QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS  279 (354)
T ss_dssp             CCCSSCCEEEEEETTSCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EeCCCCCEEEEEeCCCeEEEEECCCCcEE-----EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence            98644338999999999999999875322     2234678899999999999999999999999999999776555444


Q ss_pred             ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        435 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       435 ~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ...+...+.+++|+|++++|++++.|+.|++||+.+++.+..+.+|.+.|++++|+||+++|++|+.||+
T Consensus       280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~  349 (354)
T 2pbi_B          280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT  349 (354)
T ss_dssp             CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred             CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence            4445567899999999999999999999999999999999999999999999999999999999999985

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.9e-44  Score=330.02  Aligned_cols=291  Identities=14%  Similarity=0.204  Sum_probs=233.7

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC---------CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcE
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  227 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  227 (504)
                      .++..|.+++|+|||++|++++ |+++++||...         ...........+...|.+++|+|++ .|++++.||+|
T Consensus        28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v  105 (344)
T 4gqb_B           28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV  105 (344)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred             cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence            4677899999999999999887 67777776321         0111122333456779999999985 68899999999


Q ss_pred             EEEECCCCeEEEe----ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        228 AVWDLHNQTLVRQ----FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       228 ~iwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      +|||+++++.+..    +.+|.+.|++++|+|++++|++++.|++|++||+++++.               ......|..
T Consensus       106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~---------------~~~~~~h~~  170 (344)
T 4gqb_B          106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV---------------LSSYRAHAA  170 (344)
T ss_dssp             EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---------------EEEECCCSS
T ss_pred             EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEEcCcCC
Confidence            9999998865433    458999999999999999999999999999999999875               334457889


Q ss_pred             ceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        304 YIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       304 ~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      .|.+++|++++ .+|++++.|++|++||+++++.........+...+.+++|+|++.. ++++++.|+.|++||++....
T Consensus       171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~l~sg~~dg~v~~wd~~~~~~  249 (344)
T 4gqb_B          171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE-VFVFGDENGTVSLVDTKSTSC  249 (344)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT-EEEEEETTSEEEEEESCC--C
T ss_pred             ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCc-ceEEeccCCcEEEEECCCCcE
Confidence            99999999988 4788999999999999998876655555666778999999997665 788999999999999987643


Q ss_pred             CCcccccccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC-EEEEeeCC
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSD  460 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~d  460 (504)
                      ..     ....|...|++++|+|++ ++|++++.|++|++||+++++.   ..+.+|...|++++|+|+++ +|++++.|
T Consensus       250 ~~-----~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~---~~~~~H~~~V~~v~~sp~~~~llas~s~D  321 (344)
T 4gqb_B          250 VL-----SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL---FRSQAHRDFVRDATWSPLNHSLLTTVGWD  321 (344)
T ss_dssp             CE-----EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE---EEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             EE-----EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE---EEEcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence            32     234688899999999998 5799999999999999987643   34578999999999999986 57799999


Q ss_pred             CcEEEEEcCCcce
Q psy17188        461 GNIAVWDLHNQTL  473 (504)
Q Consensus       461 g~i~iwd~~~~~~  473 (504)
                      ++|++|++.+...
T Consensus       322 ~~v~~w~v~~~~~  334 (344)
T 4gqb_B          322 HQVVHHVVPTEPL  334 (344)
T ss_dssp             SCEEEEECCC---
T ss_pred             CeEEEEECCCCCC
Confidence            9999999987543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.2e-43  Score=367.45  Aligned_cols=361  Identities=17%  Similarity=0.273  Sum_probs=296.5

Q ss_pred             eeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEE
Q psy17188        107 INTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  184 (504)
Q Consensus       107 ~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  184 (504)
                      .+.+ +|.+.|.+++|+|++++|++++ ||.|+|||+.++.   .+..+  ..|...|.+++|+|++++|++++.||.|+
T Consensus         6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~   80 (814)
T 3mkq_A            6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV---EVRSI--QVTETPVRAGKFIARKNWIIVGSDDFRIR   80 (814)
T ss_dssp             EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEE--ECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred             ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc---eEEEE--ecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence            3444 8999999999999999999998 9999999998753   22222  37899999999999999999999999999


Q ss_pred             EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEcc-CCCEEEE
Q psy17188        185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISA-DGTKLWT  262 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s  262 (504)
                      +||+.+++.  ...+.+|...|.+++|+|++++|++++.||.|++||++++ .....+.+|...|.+++|+| +++.|++
T Consensus        81 vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~  158 (814)
T 3mkq_A           81 VFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS  158 (814)
T ss_dssp             EEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred             EEECCCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence            999987653  5667889999999999999999999999999999999987 77888899999999999999 8889999


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++.||.|++||+.++...              ......+...+..++|+|  ++++|++++.||.|++||+.++  ....
T Consensus       159 ~~~dg~v~vwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~  222 (814)
T 3mkq_A          159 GCLDRTVKVWSLGQSTPN--------------FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--SCVA  222 (814)
T ss_dssp             EETTSEEEEEETTCSSCS--------------EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT--EEEE
T ss_pred             EeCCCeEEEEECCCCcce--------------eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC--cEEE
Confidence            999999999999876531              111223347799999999  9999999999999999999876  4456


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC--EEEEeeCCCc
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR--TLIVGGEASN  418 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~l~~~~~dg~  418 (504)
                      .+..|...+.+++|+|+++  ++++++.|+.|++||+.......     ....+...+.+++|+|++.  +++++ .++.
T Consensus       223 ~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~  294 (814)
T 3mkq_A          223 TLEGHMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSSTYKVEK-----TLNVGLERSWCIATHPTGRKNYIASG-FDNG  294 (814)
T ss_dssp             EEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCSEEE-----EECCSSSSEEEEEECTTCGGGEEEEE-ETTE
T ss_pred             EEcCCCCCEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCcEEE-----EeecCCCcEEEEEEccCCCceEEEEE-eCCC
Confidence            6677888999999999998  89999999999999997643221     2234567899999999987  45555 4666


Q ss_pred             EEEeeCCCCCcceee-----------------------------------------cccCCCCceeEEEECCCCCEEEEe
Q psy17188        419 LSIWDLASPTPRIKA-----------------------------------------ELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       419 i~iwd~~~~~~~~~~-----------------------------------------~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      +.+|++.........                                         ....+...+.+++|+|++++|+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~  374 (814)
T 3mkq_A          295 FTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVV  374 (814)
T ss_dssp             EEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEE
T ss_pred             EEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEe
Confidence            888887643221111                                         112334457899999999999999


Q ss_pred             eCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        458 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       458 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      + |+.+.+|++......     +.+.+.+++|+||+++|++++.||+
T Consensus       375 ~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~  415 (814)
T 3mkq_A          375 G-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQ  415 (814)
T ss_dssp             E-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCC
T ss_pred             c-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCc
Confidence            8 899999998654332     3467889999999999999999874

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=6.1e-43  Score=323.79  Aligned_cols=294  Identities=19%  Similarity=0.355  Sum_probs=244.9

Q ss_pred             ecCCCCceEEEEE-----cc-CCCEEEEecCCCcEEEEeCCCCCc-----cceeeeecCcCceEEEEECCCCCEEEEEeC
Q psy17188        155 CLQRDNYIRSVKL-----LP-DGRTLIVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAISPDSKVCFSCCS  223 (504)
Q Consensus       155 ~~~~~~~v~~~~~-----s~-~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  223 (504)
                      +.+|.+.|++++|     ++ ++++|++|+.|++|++||+...+.     .....+.+|...|.+++|+|++.+|++++.
T Consensus        17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~   96 (343)
T 2xzm_R           17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW   96 (343)
T ss_dssp             EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred             eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence            4489999999999     77 999999999999999999976432     234567899999999999999999999999


Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      |++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+.......             ......|..
T Consensus        97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~-------------~~~~~~~~~  163 (343)
T 2xzm_R           97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS-------------SAEKENHSD  163 (343)
T ss_dssp             TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE-------------CCTTTSCSS
T ss_pred             CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee-------------eecccCCCc
Confidence            9999999999999999999999999999999999999999999999999998543211             111235677


Q ss_pred             ceEEEEEcCCC----------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        304 YIRSVKLLPDG----------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       304 ~v~~~~~~~~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .+.+++|+|++          .+|++++.|+.|++||...   .....+..|...+.+++|+|+++  ++++++.|+.|+
T Consensus       164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~g~--~l~sgs~dg~v~  238 (343)
T 2xzm_R          164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPNGK--YIATGGKDKKLL  238 (343)
T ss_dssp             CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTTSS--EEEEEETTCEEE
T ss_pred             eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCCCC--EEEEEcCCCeEE
Confidence            89999999987          7899999999999999432   45556778889999999999998  899999999999


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-----------cCCCCce
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----------TSSAPAC  442 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v  442 (504)
                      +||+........     ...+...|.+++|+|++++++++ .|+.|++||+.+.+......+           .+|...|
T Consensus       239 iwd~~~~~~~~~-----~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  312 (343)
T 2xzm_R          239 IWDILNLTYPQR-----EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC  312 (343)
T ss_dssp             EEESSCCSSCSE-----EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE
T ss_pred             EEECCCCcccce-----eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce
Confidence            999954322111     11245569999999999988765 577899999987665432222           2577789


Q ss_pred             eEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        443 YALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       443 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ++++|+|++++|++|+.||.|++|++++++
T Consensus       313 ~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          313 TSLAWNALGKKLFAGFTDGVIRTFSFETSA  342 (343)
T ss_dssp             EEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred             EEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence            999999999999999999999999987653

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-45  Score=349.59  Aligned_cols=342  Identities=13%  Similarity=0.202  Sum_probs=273.7

Q ss_pred             ecCCCcEEEEEEcCCCc-EEEEe----------c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe
Q psy17188        110 LSHGEVVCAVTISNPTK-YVYTG----------G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  177 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~-~l~~~----------~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  177 (504)
                      +.+...|.+++|+|+++ +|+++          + |+.|+|||+.++.....+.   ...|...|.+++|+|++++|+++
T Consensus         9 l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~   85 (416)
T 2pm9_A            9 LAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIA---SLQVDSKFNDLDWSHNNKIIAGA   85 (416)
T ss_dssp             -CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSC---CCCCSSCEEEEEECSSSSCEEEE
T ss_pred             HhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEE---EEecCCceEEEEECCCCCeEEEE
Confidence            34556789999999987 99998          6 8999999998764322222   23688999999999999999999


Q ss_pred             cCCCcEEEEeCCCC--CccceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCe------EEEe---ecCCC
Q psy17188        178 GEASNLSIWDLASP--TPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQT------LVRQ---FQGHT  245 (504)
Q Consensus       178 ~~dg~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~---~~~h~  245 (504)
                      +.|+.|++||+...  .......+..|...|.+++|+|+ +++|++++.|+.|++||+.+++      ....   +..|.
T Consensus        86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  165 (416)
T 2pm9_A           86 LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV  165 (416)
T ss_dssp             ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred             ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence            99999999999862  12346677889999999999998 8899999999999999999876      3333   46799


Q ss_pred             CCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCC
Q psy17188        246 DGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEA  323 (504)
Q Consensus       246 ~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d  323 (504)
                      ..|.+++|+|+ +.+|++++.|+.|++||+++++.... +..        ......+...+.+++|+|++ .++++++.|
T Consensus       166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  236 (416)
T 2pm9_A          166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIH-LSY--------TSPNSGIKQQLSVVEWHPKNSTRVATATGS  236 (416)
T ss_dssp             CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEE-ECC--------CCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred             CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceE-Eec--------cccccccCCceEEEEECCCCCCEEEEEECC
Confidence            99999999998 78999999999999999998864211 000        00001226789999999997 689999999


Q ss_pred             C---cEEEEeCCCCCccceeeec-cCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        324 S---NLSIWDLASPTPRIKAELT-SSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       324 g---~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      +   .|++||+++.. .....+. .|...+.+++|+| ++.  ++++++.|+.|++||++.....     .....|...|
T Consensus       237 ~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~--~l~s~~~dg~v~~wd~~~~~~~-----~~~~~~~~~v  308 (416)
T 2pm9_A          237 DNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEH--LLLSSGRDNTVLLWNPESAEQL-----SQFPARGNWC  308 (416)
T ss_dssp             SSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSS--CEEEEESSSEEEEECSSSCCEE-----EEEECSSSCC
T ss_pred             CCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCC--eEEEEeCCCCEEEeeCCCCccc-----eeecCCCCce
Confidence            8   99999998753 2334455 7888999999999 666  7999999999999999875322     2223577889


Q ss_pred             EEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeec---------------------------------ccCCCCceeE
Q psy17188        399 RSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAE---------------------------------LTSSAPACYA  444 (504)
Q Consensus       399 ~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------------------------~~~~~~~v~~  444 (504)
                      .+++|+|++ .+|++++.|+.|++||+.+........                                 ...+...+++
T Consensus       309 ~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (416)
T 2pm9_A          309 FKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPA  388 (416)
T ss_dssp             CCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCC
T ss_pred             EEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccc
Confidence            999999999 899999999999999998765332210                                 0114566778


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        445 LAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       445 l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      ++|+|||++|++++.|+.|+||++.+.
T Consensus       389 ~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          389 AHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             eEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence            999999999999999999999999764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.9e-43  Score=332.04  Aligned_cols=314  Identities=24%  Similarity=0.441  Sum_probs=245.5

Q ss_pred             ceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeee-------------ecCCCCceEEEEEccCCC
Q psy17188        106 QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLD-------------CLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus       106 ~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~-------------~~~~~~~v~~~~~s~~~~  172 (504)
                      ....++|.+.|++++|+|+|++|++++++.++||++.++.....+....             ...+...|.+++|+|+++
T Consensus        57 ~~~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~  136 (393)
T 1erj_A           57 LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK  136 (393)
T ss_dssp             EEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred             eEEecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence            3455689999999999999999999999999999998764322211100             001234599999999999


Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEE
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID  252 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~  252 (504)
                      +|++|+.|+.|++||+.+++  ....+.+|...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+++
T Consensus       137 ~l~s~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~  213 (393)
T 1erj_A          137 FLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA  213 (393)
T ss_dssp             EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred             EEEEEcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence            99999999999999998654  456788999999999999999999999999999999999999888887 677899999


Q ss_pred             Ecc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        253 ISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       253 ~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      |+| ++++|++++.|+.|++||+++++.... +...       ......|...|.+++|+|++++|++++.|+.|++||+
T Consensus       214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~-~~~~-------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~  285 (393)
T 1erj_A          214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVER-LDSE-------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL  285 (393)
T ss_dssp             ECSTTCCEEEEEETTSCEEEEETTTCCEEEE-EC-------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             EECCCCCEEEEEcCCCcEEEEECCCCcEEEe-eccc-------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            999 899999999999999999998864211 0000       1112457788999999999999999999999999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ++.........             +..          ....                .....|...|.+++|+|++++|+
T Consensus       286 ~~~~~~~~~~~-------------~~~----------~~~~----------------~~~~~h~~~v~~~~~~~~~~~l~  326 (393)
T 1erj_A          286 QNANNKSDSKT-------------PNS----------GTCE----------------VTYIGHKDFVLSVATTQNDEYIL  326 (393)
T ss_dssp             --------------------------------------CEE----------------EEEECCSSCEEEEEECGGGCEEE
T ss_pred             CCCCCcccccC-------------CCC----------Ccce----------------EEEecccCcEEEEEECCCCCEEE
Confidence            76532110000             000          0000                11124677899999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC------CCCEEEEeeCCCcEEEEEcCCc
Q psy17188        412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP------DSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~------~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +++.|+.|++||+.+++..  ..+.+|...|.+++|++      ++++|++|+.||+|+||++...
T Consensus       327 sgs~D~~v~iwd~~~~~~~--~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          327 SGSKDRGVLFWDKKSGNPL--LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             EEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             EEeCCCeEEEEECCCCeEE--EEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            9999999999999987644  45667889999999986      6889999999999999998643

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=7.2e-43  Score=323.11  Aligned_cols=317  Identities=18%  Similarity=0.265  Sum_probs=265.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      -|.+.|.+++|+|+|++++++. ++.+.+|....     ....+...+|...|.+++|+|++++|++++ |+.|++||+.
T Consensus         7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~   80 (337)
T 1gxr_A            7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS   80 (337)
T ss_dssp             EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCS-----EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred             ccCCceeEEEECCCCCEEEeecCCCcEeccccCC-----ccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence            4567899999999999999877 66666664432     223344447999999999999999999998 9999999998


Q ss_pred             CCCccc-eeeee--cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEEEc
Q psy17188        190 SPTPRI-KAELT--SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       190 ~~~~~~-~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      +++... ...+.  .|...|.+++|+|++++|++++.|+.|++||+++++  ....+..|...|.+++|+|++++|++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  160 (337)
T 1gxr_A           81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC  160 (337)
T ss_dssp             STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence            764321 22222  788999999999999999999999999999999887  6677888999999999999999999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .|+.|++||+++++.               ......+...+.+++|+|++++|++++.|+.|++||+++.+...      
T Consensus       161 ~dg~v~~~d~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~------  219 (337)
T 1gxr_A          161 SDGNIAVWDLHNQTL---------------VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ------  219 (337)
T ss_dssp             TTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE------
T ss_pred             CCCcEEEEeCCCCce---------------eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEe------
Confidence            999999999998864               22334577889999999999999999999999999987652110      


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                                                   .+                 .+...+.+++|+|++++|++++.++.|++||+
T Consensus       220 -----------------------------~~-----------------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~  253 (337)
T 1gxr_A          220 -----------------------------QH-----------------DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV  253 (337)
T ss_dssp             -----------------------------EE-----------------ECSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             -----------------------------ee-----------------cCCCceEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence                                         00                 12345779999999999999999999999999


Q ss_pred             CCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        425 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++.+.   .....|...|.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||+
T Consensus       254 ~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~  329 (337)
T 1gxr_A          254 NKPDK---YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             TSSCE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             CCCCe---EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCe
Confidence            87653   345678889999999999999999999999999999999888554 58899999999999999999999985

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.3e-42  Score=314.91  Aligned_cols=293  Identities=19%  Similarity=0.333  Sum_probs=242.5

Q ss_pred             ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ....+ +|.+.|++++|+|++++|++++ |+.|++|++.++..   ..  ...+|...|.+++|+|++++|++++.|+.|
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~---~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i   89 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF---EK--TISGHKLGISDVAWSSDSNLLVSASDDKTL   89 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE---EE--EECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc---ch--hhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence            33444 8999999999999999999988 99999999977532   22  233789999999999999999999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ++||+.+++  ....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++++|+++
T Consensus        90 ~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  167 (312)
T 4ery_A           90 KIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS  167 (312)
T ss_dssp             EEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             EEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence            999998765  356778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.|+.|++||+++++...              .....+...+..++|+|++++|++++.|+.|++||+++.+.  ...+.
T Consensus       168 ~~d~~i~~wd~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~  231 (312)
T 4ery_A          168 SYDGLCRIWDTASGQCLK--------------TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYT  231 (312)
T ss_dssp             ETTSCEEEEETTTCCEEE--------------EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE--EEEEC
T ss_pred             eCCCcEEEEECCCCceee--------------EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--EEEEE
Confidence            999999999999876421              11123456789999999999999999999999999987531  11111


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .+...                                              ...+......+++.+|++++.||.|++||
T Consensus       232 ~~~~~----------------------------------------------~~~~~~~~~~~~~~~l~sg~~dg~i~vwd  265 (312)
T 4ery_A          232 GHKNE----------------------------------------------KYCIFANFSVTGGKWIVSGSEDNLVYIWN  265 (312)
T ss_dssp             SSCCS----------------------------------------------SSCCCEEEECSSSCEEEECCTTSCEEEEE
T ss_pred             ecCCc----------------------------------------------eEEEEEEEEeCCCcEEEEECCCCEEEEEE
Confidence            11100                                              00111233346788999999999999999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEee--CCCcEEEEEcC
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLH  469 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~--~dg~i~iwd~~  469 (504)
                      +.+++.  ...+.+|...|.+++|+|++++|++++  .|+.|++|+.+
T Consensus       266 ~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          266 LQTKEI--VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             TTTCCE--EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             CCCchh--hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            997654  455678889999999999999999987  69999999864

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=5.4e-43  Score=324.12  Aligned_cols=287  Identities=16%  Similarity=0.225  Sum_probs=222.8

Q ss_pred             CCCC-ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee-eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        157 QRDN-YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       157 ~~~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +|.. .|.+++|+|++++||+|+.|++|+|||+.+++..... ...+|...|.+++|+|++++|++++.|++|++||+.+
T Consensus        13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~   92 (345)
T 3fm0_A           13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ   92 (345)
T ss_dssp             CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred             CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence            6776 8999999999999999999999999999876533222 3368999999999999999999999999999999987


Q ss_pred             C--eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC
Q psy17188        235 Q--TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  312 (504)
Q Consensus       235 ~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  312 (504)
                      +  +.+..+.+|...|.+++|+|++++|++++.|++|++||++++....            .......|...|.+++|+|
T Consensus        93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~------------~~~~~~~h~~~v~~~~~~p  160 (345)
T 3fm0_A           93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE------------CVSVLNSHTQDVKHVVWHP  160 (345)
T ss_dssp             C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE------------EEEEECCCCSCEEEEEECS
T ss_pred             CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE------------EEEEecCcCCCeEEEEECC
Confidence            6  4678899999999999999999999999999999999998764210            0223346778899999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc
Q psy17188        313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL  392 (504)
Q Consensus       313 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~  392 (504)
                      ++++|++++.|+.|++||.+..+......+..|...                                            
T Consensus       161 ~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~--------------------------------------------  196 (345)
T 3fm0_A          161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHEST--------------------------------------------  196 (345)
T ss_dssp             SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--------------------------------------------
T ss_pred             CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc--------------------------------------------
Confidence            999999999999999999876533333334444444                                            


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------------ceeeccc-CCCCceeEEEECCCCCEEEEee
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------------RIKAELT-SSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                           |.+++|+|+|++|++++.|+.|++||......             .....+. .|...|.+++|+|++..|++++
T Consensus       197 -----v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~  271 (345)
T 3fm0_A          197 -----VWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC  271 (345)
T ss_dssp             -----EEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred             -----eEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence                 44555555555555555555555555321110             0111122 3677899999999999999999


Q ss_pred             CCCcEEEEEcCCcce---------EEEEeecCCceEEEEEccCC-CEEEEecCCCC
Q psy17188        459 SDGNIAVWDLHNQTL---------VRQFQGHTDGASCIDISADG-TKLWTGGLDNT  504 (504)
Q Consensus       459 ~dg~i~iwd~~~~~~---------~~~~~~h~~~v~~~~~s~d~-~~l~s~s~Dgt  504 (504)
                      .|+.|++|+...+..         .....+|...|++++|+|++ .+|++||.||+
T Consensus       272 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~  327 (345)
T 3fm0_A          272 GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE  327 (345)
T ss_dssp             TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred             CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence            999999999876421         12234789999999999998 59999999986

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-43  Score=321.19  Aligned_cols=301  Identities=14%  Similarity=0.157  Sum_probs=235.5

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee-ec-CcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+|.+.|.+++|+|+  +|++|+.|++|++||+..+.......+ .. |...|.+++|+|++++|++++.|++|++||+.
T Consensus        11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~   88 (330)
T 2hes_X           11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE   88 (330)
T ss_dssp             ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred             ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence            389999999999987  999999999999999987544334444 34 99999999999999999999999999999985


Q ss_pred             C-------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        234 N-------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       234 ~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      .       .+.+..+.+|...|.+++|+|++++|++++.|++|++||++.....           .........|...|.
T Consensus        89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~-----------~~~~~~~~~h~~~v~  157 (330)
T 2hes_X           89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE-----------YECISVLQEHSQDVK  157 (330)
T ss_dssp             ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC-----------CEEEEEECCCSSCEE
T ss_pred             cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC-----------eEEEEEeccCCCceE
Confidence            3       4567888999999999999999999999999999999999543100           000223456788999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV  386 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~  386 (504)
                      +++|+|++++|++++.|++|++||...........+..|...|.+++|+|++....+++++.|+.|++||+.........
T Consensus       158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~  237 (330)
T 2hes_X          158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ  237 (330)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence            99999999999999999999999987765456677888999999999999965448999999999999998754221110


Q ss_pred             ---ccccc-ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee-ecccCCCC-ceeEEEECC--CCCEEEEee
Q psy17188        387 ---SQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK-AELTSSAP-ACYALAISP--DSKVCFSCC  458 (504)
Q Consensus       387 ---~~~~~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~-~v~~l~~s~--~~~~l~s~~  458 (504)
                         ..... ..|...|.+++|++++ +|++++.||.|++||..+++.... .....|.. .|++++|+|  ++++|++++
T Consensus       238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s  316 (330)
T 2hes_X          238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG  316 (330)
T ss_dssp             EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred             eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence               11111 1377889999999765 799999999999999876542222 23355665 899999999  789999999


Q ss_pred             CCCcEEEEEcCC
Q psy17188        459 SDGNIAVWDLHN  470 (504)
Q Consensus       459 ~dg~i~iwd~~~  470 (504)
                      .||.|+|||+++
T Consensus       317 ~Dg~v~~W~~~~  328 (330)
T 2hes_X          317 DDGIVNFWSLEK  328 (330)
T ss_dssp             TTSEEEEEEC--
T ss_pred             CCCcEEEEEecc
Confidence            999999999864

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.8e-42  Score=325.34  Aligned_cols=286  Identities=22%  Similarity=0.383  Sum_probs=236.1

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC------------------cCceEEEEECCCCCE
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS------------------APACYALAISPDSKV  217 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~  217 (504)
                      .+|...|.+++|+|||++||+|+ ++.+++|++.+++.  ...+..+                  ...|.+++|+|++++
T Consensus        61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~  137 (393)
T 1erj_A           61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF  137 (393)
T ss_dssp             EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred             cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE--EEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence            36899999999999999999986 68999999987654  2233322                  224899999999999


Q ss_pred             EEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       218 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      |++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++..                .
T Consensus       138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~----------------~  201 (393)
T 1erj_A          138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS----------------L  201 (393)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----------------E
T ss_pred             EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE----------------E
Confidence            999999999999999999999999999999999999999999999999999999999988742                2


Q ss_pred             ecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188        298 CLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      ...+...+.+++|+| ++++|++++.|+.|++||++++....  .+...                               
T Consensus       202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~--~~~~~-------------------------------  248 (393)
T 1erj_A          202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE--RLDSE-------------------------------  248 (393)
T ss_dssp             EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE--EEC---------------------------------
T ss_pred             EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE--eeccc-------------------------------
Confidence            233556799999999 89999999999999999998753211  11000                               


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc----------ceeecccCCCCceeEEE
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP----------RIKAELTSSAPACYALA  446 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~~~~~~v~~l~  446 (504)
                                 ......|...|.+++|+|++++|++++.|+.|++||+++...          .....+.+|...|.+++
T Consensus       249 -----------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  317 (393)
T 1erj_A          249 -----------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA  317 (393)
T ss_dssp             ---------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEE
T ss_pred             -----------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEE
Confidence                       000124567788999999999999999999999999875422          22344567888999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEcc------CCCEEEEecCCCC
Q psy17188        447 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA------DGTKLWTGGLDNT  504 (504)
Q Consensus       447 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~------d~~~l~s~s~Dgt  504 (504)
                      |+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|++      ++++|++||.||+
T Consensus       318 ~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~  381 (393)
T 1erj_A          318 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK  381 (393)
T ss_dssp             ECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred             ECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence            999999999999999999999999999999999999999999986      6889999999985

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2.3e-42  Score=319.86  Aligned_cols=302  Identities=16%  Similarity=0.331  Sum_probs=239.6

Q ss_pred             cccceeee-cCCCcEEEEEE-----cC-CCcEEEEec-CCeEEEEeCCCCCCCC--ceeeeeecCCCCceEEEEEccCCC
Q psy17188        103 HARQINTL-SHGEVVCAVTI-----SN-PTKYVYTGG-KGCVKVWDISQPGSKT--PVSQLDCLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus       103 ~~~~~~~~-~h~~~V~~v~~-----s~-~~~~l~~~~-d~~i~vw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~  172 (504)
                      ..+....+ +|.+.|++++|     ++ ++++|++++ |++|++||+...+...  ........+|...|.+++|+|++.
T Consensus        10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~   89 (343)
T 2xzm_R           10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC   89 (343)
T ss_dssp             EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred             EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence            34455556 89999999999     76 899999998 9999999997643221  112234458999999999999999


Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee--cCCCCCeEE
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASC  250 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~  250 (504)
                      +|++++.|++|++||+.+++  ....+.+|...|.+++|+|++++|++++.|+.|++||+.........  ..|...|.+
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~  167 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC  167 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred             EEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence            99999999999999998765  35678899999999999999999999999999999999854433222  368999999


Q ss_pred             EEEccCC----------CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        251 IDISADG----------TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       251 ~~~~~~~----------~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      ++|+|++          .+|++++.|+.|++||.....                ......|...|.+++|+|++++|+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------~~~~~~h~~~v~~~~~s~~g~~l~sg  231 (343)
T 2xzm_R          168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQI----------------RYTFKAHESNVNHLSISPNGKYIATG  231 (343)
T ss_dssp             EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEE----------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             eeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCce----------------eEEEcCccccceEEEECCCCCEEEEE
Confidence            9999986          689999999999999954322                23345678899999999999999999


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC--ccc------ccccc
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT--PVS------QLDCL  392 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~~------~~~~~  392 (504)
                      +.|+.|++||+....... ..+ .+...+.+++|+|++.  +++ ++.|+.+++||+.......  .+.      .....
T Consensus       232 s~dg~v~iwd~~~~~~~~-~~~-~~~~~v~~v~~sp~~~--~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~  306 (343)
T 2xzm_R          232 GKDKKLLIWDILNLTYPQ-REF-DAGSTINQIAFNPKLQ--WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQK  306 (343)
T ss_dssp             ETTCEEEEEESSCCSSCS-EEE-ECSSCEEEEEECSSSC--EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBC
T ss_pred             cCCCeEEEEECCCCcccc-eee-cCCCcEEEEEECCCCC--EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhc
Confidence            999999999995443222 222 2344799999999986  454 4568889999997654332  111      00112


Q ss_pred             cCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       393 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .|...+.+++|+|+|++|++|+.||.|++|+++++
T Consensus       307 ~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          307 GKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             CSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred             CCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence            56778999999999999999999999999998643

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.6e-44  Score=340.67  Aligned_cols=330  Identities=15%  Similarity=0.249  Sum_probs=267.4

Q ss_pred             CceEEEEEccCCC-EEEEe----------cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        160 NYIRSVKLLPDGR-TLIVG----------GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       160 ~~v~~~~~s~~~~-~l~~~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      ..|.+++|+|+++ +|+++          +.|+.|++||+.+++.........|...|.+++|+|++++|++++.|+.|+
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~   92 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE   92 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence            4688999999987 99999          889999999998765322233345888999999999999999999999999


Q ss_pred             EEECCC----CeEEEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        229 VWDLHN----QTLVRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       229 iwd~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      +||+.+    .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+++++...      .............+..
T Consensus        93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~------~~~~~~~~~~~~~~~~  166 (416)
T 2pm9_A           93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESP------SNYTPLTPGQSMSSVD  166 (416)
T ss_dssp             EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCT------TTCCCBCCCCSCCSSC
T ss_pred             EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccc------ccccccccccccCCCC
Confidence            999988    4588889999999999999998 8999999999999999998875100      0000001112345778


Q ss_pred             ceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceeeeccC------CCceeeEEECCCCCCceeeeccCCC---eEE
Q psy17188        304 YIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSS------APACYALAISPDSKSPFFSSHHYKS---CVK  373 (504)
Q Consensus       304 ~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~---~i~  373 (504)
                      .+.+++|+|+ +.+|++++.|+.|++||+++.+.  ...+..+      ...+.+++|+|++.. ++++++.++   .|+
T Consensus       167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~~~~i~  243 (416)
T 2pm9_A          167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHPKNST-RVATATGSDNDPSIL  243 (416)
T ss_dssp             CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECSSCTT-EEEEEECCSSSCCCC
T ss_pred             CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECCCCCC-EEEEEECCCCCceEE
Confidence            8999999998 78999999999999999998743  3333333      678999999999854 788888888   999


Q ss_pred             EEecCCCCCCCcccccccc-cCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        374 VWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      +||++......    .... .|...|.+++|+| ++++|++++.|+.|++||+++++..  ..+..|...|++++|+|++
T Consensus       244 ~~d~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~v~~~~~s~~~  317 (416)
T 2pm9_A          244 IWDLRNANTPL----QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL--SQFPARGNWCFKTKFAPEA  317 (416)
T ss_dssp             EEETTSTTSCS----BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE--EEEECSSSCCCCEEECTTC
T ss_pred             EEeCCCCCCCc----EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc--eeecCCCCceEEEEECCCC
Confidence            99998753211    1122 5778899999999 9999999999999999999987543  4456778889999999999


Q ss_pred             -CEEEEeeCCCcEEEEEcCCcceEEEEee-----------------------------------cCCceEEEEEccCCCE
Q psy17188        452 -KVCFSCCSDGNIAVWDLHNQTLVRQFQG-----------------------------------HTDGASCIDISADGTK  495 (504)
Q Consensus       452 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------------------------h~~~v~~~~~s~d~~~  495 (504)
                       ++|++++.|+.|++||+.+++.......                                   |...+.+++|+|||++
T Consensus       318 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~  397 (416)
T 2pm9_A          318 PDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKL  397 (416)
T ss_dssp             TTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEE
T ss_pred             CCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeE
Confidence             8999999999999999987764332211                                   6677889999999999


Q ss_pred             EEEecCCCC
Q psy17188        496 LWTGGLDNT  504 (504)
Q Consensus       496 l~s~s~Dgt  504 (504)
                      |++++.||+
T Consensus       398 la~~~~d~~  406 (416)
T 2pm9_A          398 VQITPDGKG  406 (416)
T ss_dssp             ECBCTTSSC
T ss_pred             EEEeCCCCe
Confidence            999999985

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-42  Score=318.22  Aligned_cols=301  Identities=20%  Similarity=0.245  Sum_probs=231.1

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +.+..+ +|.+.|.+++|+++  +|++++ |++|++||+..+.. .....+....|...|.+++|+|++++|++++.|++
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~   81 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST   81 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence            345555 89999999999988  788877 99999999976421 22222222248999999999999999999999999


Q ss_pred             EEEEeCCCCC-----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEeecCCCCCeEEEEE
Q psy17188        183 LSIWDLASPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----QTLVRQFQGHTDGASCIDI  253 (504)
Q Consensus       183 i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~  253 (504)
                      |++||+....     ......+.+|...|.+++|+|++++|++++.|++|++||++.    .+++..+.+|...|.+++|
T Consensus        82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~  161 (330)
T 2hes_X           82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW  161 (330)
T ss_dssp             EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred             EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence            9999986421     234556789999999999999999999999999999999943    3677888999999999999


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeC
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~  331 (504)
                      +|++++|++++.|++|++||..++....             ......|...|.+++|+|+  +.+|++++.|++|++||+
T Consensus       162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~-------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~  228 (330)
T 2hes_X          162 HPSEALLASSSYDDTVRIWKDYDDDWEC-------------VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY  228 (330)
T ss_dssp             CSSSSEEEEEETTSCEEEEEEETTEEEE-------------EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCeeE-------------EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence            9999999999999999999987763211             2334568889999999998  778999999999999998


Q ss_pred             CCCCc------cceeeecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC-ceEEEEE
Q psy17188        332 ASPTP------RIKAELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKL  403 (504)
Q Consensus       332 ~~~~~------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~-~i~~~~~  403 (504)
                      +....      .....+.. |...|.+++|++++   ++++++.|+.|++||...+...  ........|.. .|.+++|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~---~l~s~~~dg~v~iw~~~~~~~~--~~~~~~~~h~~~~v~~v~~  303 (330)
T 2hes_X          229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG---LIASVGADGVLAVYEEVDGEWK--VFAKRALCHGVYEINVVKW  303 (330)
T ss_dssp             EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS---CEEEEETTSCEEEEEEETTEEE--EEEEESCTTTTSCEEEEEE
T ss_pred             cCCCccccceeEEeeecccccccceEEEEEcCCC---EEEEEeCCCEEEEEEcCCCceE--EEeccccccccceEEEEEE
Confidence            65421      12222333 78899999999665   6899999999999998643210  01111234555 8999999


Q ss_pred             cC--CCCEEEEeeCCCcEEEeeCCC
Q psy17188        404 LP--DGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       404 s~--~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      +|  ++++|++++.||.|++||++.
T Consensus       304 ~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          304 LELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             C-----CCEEEEETTSEEEEEEC--
T ss_pred             ecCCCceEEEEecCCCcEEEEEecc
Confidence            99  789999999999999999864

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.1e-43  Score=330.26  Aligned_cols=307  Identities=20%  Similarity=0.349  Sum_probs=252.6

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW  261 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  261 (504)
                      .+..|+...  ......+.+|...|++++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|+
T Consensus        47 ~~~~~~~~~--~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la  124 (380)
T 3iz6_a           47 TAVSFNPTD--LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA  124 (380)
T ss_dssp             GCCCCCCCC--CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred             cccccccce--eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence            344555543  334677899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      +++.|+.+++||+.+....        ............|...+.++.|.|+ +..|++++.|++|++||+++++.....
T Consensus       125 s~~~d~~v~iw~~~~~~~~--------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~  196 (380)
T 3iz6_a          125 CGGLDSACSIFNLSSQADR--------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF  196 (380)
T ss_dssp             ECCSSSCCEEEECCCCSSC--------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred             EeeCCCcEEEEECCCCccc--------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence            9999999999999764310        0000012234578888999999996 457999999999999999987543322


Q ss_pred             e---eccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        341 E---LTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       341 ~---~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                      .   ...|...+.++++++ ++.  ++++++.|+.|++||++.....    ......|...|.+++|+|++++|++++.|
T Consensus       197 ~~~~~~~h~~~v~~~~~~~~~~~--~l~sgs~D~~v~~wd~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D  270 (380)
T 3iz6_a          197 GSEFPSGHTADVLSLSINSLNAN--MFISGSCDTTVRLWDLRITSRA----VRTYHGHEGDINSVKFFPDGQRFGTGSDD  270 (380)
T ss_dssp             CCCSSSSCCSCEEEEEECSSSCC--EEEEEETTSCEEEEETTTTCCC----CEEECCCSSCCCEEEECTTSSEEEEECSS
T ss_pred             ecccCCCCccCeEEEEeecCCCC--EEEEEECCCeEEEEECCCCCcc----eEEECCcCCCeEEEEEecCCCeEEEEcCC
Confidence            1   156788999999987 555  8999999999999999753221    12234688899999999999999999999


Q ss_pred             CcEEEeeCCCCCcceeeccc-----CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE----eecCCceEEE
Q psy17188        417 SNLSIWDLASPTPRIKAELT-----SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF----QGHTDGASCI  487 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~~  487 (504)
                      +.|++||+++++........     .+...|++++|+|++++|++|+.||.|++||+.+++.+..+    .+|.+.|+++
T Consensus       271 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l  350 (380)
T 3iz6_a          271 GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL  350 (380)
T ss_dssp             SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred             CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence            99999999987655443322     22335889999999999999999999999999999988877    5799999999


Q ss_pred             EEccCCCEEEEecCCCC
Q psy17188        488 DISADGTKLWTGGLDNT  504 (504)
Q Consensus       488 ~~s~d~~~l~s~s~Dgt  504 (504)
                      +|+|||++|++||.||+
T Consensus       351 ~~s~dg~~l~sgs~D~~  367 (380)
T 3iz6_a          351 GLSSDGSALCTGSWDKN  367 (380)
T ss_dssp             EECSSSSEEEEECTTSC
T ss_pred             EECCCCCEEEEeeCCCC
Confidence            99999999999999986

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=6e-42  Score=313.46  Aligned_cols=280  Identities=21%  Similarity=0.419  Sum_probs=235.2

Q ss_pred             eecCCCCceEEEEEccCC-CEEEEecCCCcEEEEeCCCCCc---cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEE
Q psy17188        154 DCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  229 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  229 (504)
                      .+.+|.+.|++++|+|++ ++|++|+.|++|++|++.....   .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus        12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~   91 (319)
T 3frx_A           12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL   91 (319)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence            345899999999999965 8999999999999999865332   234567899999999999999999999999999999


Q ss_pred             EECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      ||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++...                ......|...+.++.
T Consensus        92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~----------------~~~~~~h~~~v~~~~  155 (319)
T 3frx_A           92 WDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC----------------LATLLGHNDWVSQVR  155 (319)
T ss_dssp             EETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE----------------EEEECCCSSCEEEEE
T ss_pred             EECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe----------------EEEEeccCCcEEEEE
Confidence            9999999999999999999999999999999999999999999997654                233456788899999


Q ss_pred             EcCC------CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        310 LLPD------GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       310 ~~~~------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      ++|.      +..+++++.|+.|++||+++.+.  ..                                           
T Consensus       156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~-------------------------------------------  190 (319)
T 3frx_A          156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EA-------------------------------------------  190 (319)
T ss_dssp             ECCC------CCEEEEEETTSCEEEEETTTTEE--EE-------------------------------------------
T ss_pred             EccCCCCCCCccEEEEEeCCCEEEEEECCcchh--he-------------------------------------------
Confidence            9985      44788888888888888765311  00                                           


Q ss_pred             CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                            ....|...|.+++|+|++++|++++.||.|++||+.+++......  . ...|.+++|+|++.+|++++.++ +
T Consensus       191 ------~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~-~~~v~~~~~sp~~~~la~~~~~~-i  260 (319)
T 3frx_A          191 ------DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--A-QDEVFSLAFSPNRYWLAAATATG-I  260 (319)
T ss_dssp             ------EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-CSCEEEEEECSSSSEEEEEETTE-E
T ss_pred             ------eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--C-CCcEEEEEEcCCCCEEEEEcCCC-c
Confidence                  012456778899999999999999999999999999776544433  2 35799999999999999887655 9


Q ss_pred             EEEEcCCcceEEEEee--------cCCceEEEEEccCCCEEEEecCCCC
Q psy17188        464 AVWDLHNQTLVRQFQG--------HTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       464 ~iwd~~~~~~~~~~~~--------h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ++|++..+..+..+..        |...+.+++|+|||++|++|+.||+
T Consensus       261 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~  309 (319)
T 3frx_A          261 KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV  309 (319)
T ss_dssp             EEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred             EEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce
Confidence            9999998887776643        4567999999999999999999985

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=7.8e-42  Score=312.42  Aligned_cols=289  Identities=19%  Similarity=0.327  Sum_probs=246.7

Q ss_pred             ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        193 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ......+.+|...|++++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW   92 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence            34566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      |+++++.               ......|...|.+++|+|++++|++++.|+.|++||++++  .....+..|...+.++
T Consensus        93 d~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~  155 (312)
T 4ery_A           93 DVSSGKC---------------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAV  155 (312)
T ss_dssp             ETTTCCE---------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEE
T ss_pred             ECCCCcE---------------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--EEEEEecCCCCcEEEE
Confidence            9998864               2334567888999999999999999999999999999876  4456677788899999


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      +|+|+++  ++++++.|+.|++||++........    ...+...+..++|+|++++|++++.|+.|++||+++++....
T Consensus       156 ~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  229 (312)
T 4ery_A          156 HFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTL----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT  229 (312)
T ss_dssp             EECTTSS--EEEEEETTSCEEEEETTTCCEEEEE----CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             EEcCCCC--EEEEEeCCCcEEEEECCCCceeeEE----eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence            9999998  8999999999999999865322111    124566789999999999999999999999999998765444


Q ss_pred             ecccCCCCc-eeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec--CCCC
Q psy17188        433 AELTSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNT  504 (504)
Q Consensus       433 ~~~~~~~~~-v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s--~Dgt  504 (504)
                      ......... +......+++++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++  .|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~  304 (312)
T 4ery_A          230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT  304 (312)
T ss_dssp             ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCC
T ss_pred             EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCcc
Confidence            332222222 22333446889999999999999999999999999999999999999999999999997  5764

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=3.7e-43  Score=335.39  Aligned_cols=339  Identities=15%  Similarity=0.167  Sum_probs=266.2

Q ss_pred             cEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc
Q psy17188        115 VVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  193 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  193 (504)
                      .+++++|+|++++|++++ |+.|++||+.+......+.     .+ ..+....|++++++|++++.|+.|++||+.+++ 
T Consensus        58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-  130 (420)
T 3vl1_A           58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK-----RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL-  130 (420)
T ss_dssp             CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC-----SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE-
T ss_pred             cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe-----cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc-
Confidence            345789999999999998 9999999998754333222     23 455666789999999999999999999998654 


Q ss_pred             cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                       ....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus       131 -~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  209 (420)
T 3vl1_A          131 -QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE  209 (420)
T ss_dssp             -EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             -eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence             3455678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      +++++....            ......+...+.++++.+.+...                       ....+...+.+++
T Consensus       210 ~~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~-----------------------~~~~~~~~v~~~~  254 (420)
T 3vl1_A          210 CGTGTTIHT------------FNRKENPHDGVNSIALFVGTDRQ-----------------------LHEISTSKKNNLE  254 (420)
T ss_dssp             TTTTEEEEE------------ECBTTBTTCCEEEEEEEECCCSS-----------------------CGGGCCCCCCTTC
T ss_pred             CCCCceeEE------------eecCCCCCCCccEEEEecCCcce-----------------------eeecccCcccceE
Confidence            998874211            01111345667777776543211                       1122334777888


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCCCccee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      |+|+++  ++++++.|+.|++||++........    ...+...|.+++|+|+++ +|++++.||.|++||+++++....
T Consensus       255 ~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~  328 (420)
T 3vl1_A          255 FGTYGK--YVIAGHVSGVITVHNVFSKEQTIQL----PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG  328 (420)
T ss_dssp             SSCTTE--EEEEEETTSCEEEEETTTCCEEEEE----CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred             EcCCCC--EEEEEcCCCeEEEEECCCCceeEEc----ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence            888887  7888888999999998765322111    224678899999999999 999999999999999998754333


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc---------ceEEEEeecCCceEEEEEccCCC---EEEEec
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISADGT---KLWTGG  500 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~s~d~~---~l~s~s  500 (504)
                      .....+...++++.+ +++++|++++.|+.|++|++.+.         .....+..|.+.|.+++|+||++   .|+++|
T Consensus       329 ~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g  407 (420)
T 3vl1_A          329 EFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG  407 (420)
T ss_dssp             EEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred             hhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence            223336667888855 57889999999999999998873         22334567889999999999999   666666


Q ss_pred             CCC
Q psy17188        501 LDN  503 (504)
Q Consensus       501 ~Dg  503 (504)
                      .+|
T Consensus       408 ~~g  410 (420)
T 3vl1_A          408 KNN  410 (420)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            665

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=8.1e-42  Score=321.85  Aligned_cols=307  Identities=15%  Similarity=0.170  Sum_probs=243.9

Q ss_pred             ceeee-cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCC
Q psy17188        106 QINTL-SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEAS  181 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg  181 (504)
                      ....+ +|.+.|++++|+|++ ++|++++ |+.|+|||+.++.   ....+...+|...|.+++|+| ++++|++++.|+
T Consensus        65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~  141 (383)
T 3ei3_B           65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN---KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG  141 (383)
T ss_dssp             EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT---CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred             eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc---cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence            34445 899999999999998 8999988 9999999998753   233334447999999999999 789999999999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KL  260 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l  260 (504)
                      .|++||+.+...........|...|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|
T Consensus       142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l  220 (383)
T 3ei3_B          142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLM  220 (383)
T ss_dssp             EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred             EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence            999999986433222223345588999999999999999999999999999 5778889999999999999999998 99


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      ++++.|+.|++||+++++..            ........+...|.+++|+| ++++|++++.|+.|++||+++.+....
T Consensus       221 ~s~~~d~~i~iwd~~~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  288 (383)
T 3ei3_B          221 ATSSVDATVKLWDLRNIKDK------------NSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ  288 (383)
T ss_dssp             EEEETTSEEEEEEGGGCCST------------TCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred             EEEeCCCEEEEEeCCCCCcc------------cceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence            99999999999999873210            00223336788999999999 999999999999999999987754322


Q ss_pred             eeecc-----CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        340 AELTS-----SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       340 ~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      .....     +...+. ..|+|                                      ...+..++|+|++++  +++
T Consensus       289 ~~~~~~~~~~~~~~~~-~~~~p--------------------------------------~~~~~~~~~s~dg~~--s~s  327 (383)
T 3ei3_B          289 IIIHPHRQFQHLTPIK-ATWHP--------------------------------------MYDLIVAGRYPDDQL--LLN  327 (383)
T ss_dssp             EEECCBCCCTTSCCCC-CEECS--------------------------------------SSSEEEEECBCCTTT--CTT
T ss_pred             cccccccccccccceE-EeccC--------------------------------------CCCceEEEecCCccc--ccC
Confidence            22111     111111 12222                                      234557889999988  889


Q ss_pred             CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      .|+.|++||+.+++.........+...+..++|+|++++|++++ ||.|+|||+++
T Consensus       328 ~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          328 DKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             CCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             CCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            99999999999887766665555667788889999999999997 99999999874

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=9e-41  Score=309.48  Aligned_cols=305  Identities=19%  Similarity=0.362  Sum_probs=246.5

Q ss_pred             Cccccceeee-cCCCcEEEEEEcCC-CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe
Q psy17188        101 PRHARQINTL-SHGEVVCAVTISNP-TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  177 (504)
Q Consensus       101 ~~~~~~~~~~-~h~~~V~~v~~s~~-~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  177 (504)
                      +.+.+...+| ||.+.|++|+|+|+ +++|++++ |++|+|||+.+.+...........+|...|.+++|+|++++|+++
T Consensus        25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~  104 (340)
T 4aow_A           25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG  104 (340)
T ss_dssp             -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence            3344555566 99999999999997 68999988 999999999886655544444556899999999999999999999


Q ss_pred             cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEEccC
Q psy17188        178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~  256 (504)
                      +.|+.|++|+.....  .......+...+..+.+++++++|++++.|+.+++||+..... .....+|...+..++|+++
T Consensus       105 ~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~  182 (340)
T 4aow_A          105 SWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN  182 (340)
T ss_dssp             ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred             cccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence            999999999998654  3555667777889999999999999999999999999987644 4456779999999999886


Q ss_pred             C--CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188        257 G--TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       257 ~--~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      +  .++++++.|+.|++||+++++.               ......|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus       183 ~~~~~~~s~~~d~~i~i~d~~~~~~---------------~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~  247 (340)
T 4aow_A          183 SSNPIIVSCGWDKLVKVWNLANCKL---------------KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG  247 (340)
T ss_dssp             SSSCEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred             CCCcEEEEEcCCCEEEEEECCCCce---------------eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence            4  5788999999999999998875               3334567889999999999999999999999999999876


Q ss_pred             CccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc----ccccccccCCCceEEEEEcCCCCEE
Q psy17188        335 TPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP----VSQLDCLQRDNYIRSVKLLPDGRTL  410 (504)
Q Consensus       335 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~~~i~~~~~s~~g~~l  410 (504)
                      +.  ...+. +...+..+.++|++.   +++++.|+.|++||++.......    ........|...|++++|+|||++|
T Consensus       248 ~~--~~~~~-~~~~v~~~~~~~~~~---~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l  321 (340)
T 4aow_A          248 KH--LYTLD-GGDIINALCFSPNRY---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL  321 (340)
T ss_dssp             EE--EEEEE-CSSCEEEEEECSSSS---EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred             ce--eeeec-CCceEEeeecCCCCc---eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence            43  33333 345899999999874   66677899999999976432111    1122234578889999999999999


Q ss_pred             EEeeCCCcEEEeeCCCCC
Q psy17188        411 IVGGEASNLSIWDLASPT  428 (504)
Q Consensus       411 ~~~~~dg~i~iwd~~~~~  428 (504)
                      ++|+.||.|++||+++|+
T Consensus       322 ~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          322 FAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EEEETTSCEEEEEEEC--
T ss_pred             EEEeCCCEEEEEeCCCcC
Confidence            999999999999998875

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-42  Score=330.75  Aligned_cols=341  Identities=11%  Similarity=0.066  Sum_probs=246.7

Q ss_pred             cccceeeecCCCcEEEEEEcCCC---------cEEEE-------------------ec-CCeEEEEeCCCCCCCCceeee
Q psy17188        103 HARQINTLSHGEVVCAVTISNPT---------KYVYT-------------------GG-KGCVKVWDISQPGSKTPVSQL  153 (504)
Q Consensus       103 ~~~~~~~~~h~~~V~~v~~s~~~---------~~l~~-------------------~~-d~~i~vw~~~~~~~~~~~~~~  153 (504)
                      ..+....+.+.+.|.+|+|+|++         ++||+                   ++ |++|+||++++++.... ...
T Consensus       123 ~~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-~~~  201 (524)
T 2j04_B          123 GKRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-KVQ  201 (524)
T ss_dssp             CCSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE-EEE
T ss_pred             CCcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-EEE
Confidence            34444456678888888888875         56665                   44 78999999977543211 112


Q ss_pred             eecCCCCceEEEEEccC------CCEEEEecCCCcEEEEeCCCCCcc---------ceeeeecCcCceEEEEECCCCCEE
Q psy17188        154 DCLQRDNYIRSVKLLPD------GRTLIVGGEASNLSIWDLASPTPR---------IKAELTSSAPACYALAISPDSKVC  218 (504)
Q Consensus       154 ~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l  218 (504)
                      ....|.+.|.+++|+|+      +.+||+++.||+|++||+..+...         ....+.+|...|++++|++++ .|
T Consensus       202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l  280 (524)
T 2j04_B          202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV  280 (524)
T ss_dssp             EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred             EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence            22356788999999996      579999999999999999865421         123577899999999999864 89


Q ss_pred             EEEeCCCcEEEEECCCCe-EEEeecCCCCCeEEE--EEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188        219 FSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCI--DISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS  294 (504)
Q Consensus       219 ~~~~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~  294 (504)
                      ++|+.||+|++||++++. ....+.+|...|.++  .|+|++ .+|++++.|++|++||+++++.               
T Consensus       281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~---------------  345 (524)
T 2j04_B          281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT---------------  345 (524)
T ss_dssp             EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH---------------
T ss_pred             EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc---------------
Confidence            999999999999999763 455688999999999  567887 8999999999999999987653               


Q ss_pred             cceecccC--CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeE
Q psy17188        295 QLDCLQRD--NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV  372 (504)
Q Consensus       295 ~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i  372 (504)
                      ......+.  ..+.+++|+|+++.+++++.|++|++||+++...  ...+..|...|.+++|+|+++  ++++++.|++|
T Consensus       346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~--~l~Sgs~Dgtv  421 (524)
T 2j04_B          346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHP--MVLAGSADGSL  421 (524)
T ss_dssp             HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCC--BCEEEETTTEE
T ss_pred             ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCC--eEEEEECCCEE
Confidence            11111222  3478999999999999999999999999988643  345667999999999999998  78999999999


Q ss_pred             EEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEECCCC
Q psy17188        373 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      ++||.... ............+...+..++|+|+++.+.. ..  ...+|+.. ++  .....+.+|...|.+++|+|++
T Consensus       422 ~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g--~~~~~l~gh~~~V~~Vafsp~~  495 (524)
T 2j04_B          422 IITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVND--VSKAKIDAHGINITCTKWNETS  495 (524)
T ss_dssp             ECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC---------------CCCSCCCEEECCST
T ss_pred             EEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCC--cceeeecCCCceEEEEECCCCC
Confidence            99998643 1111000000112235779999999985532 22  23344332 12  2345567888999999999996


Q ss_pred             C---EEEEeeCCCcEEEEEcCC
Q psy17188        452 K---VCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       452 ~---~l~s~~~dg~i~iwd~~~  470 (504)
                      +   +||+|+.||.|+||++.-
T Consensus       496 ~~~~~lAsg~~~g~vrlw~l~~  517 (524)
T 2j04_B          496 AGGKCYAFSNSAGLLTLEYLSL  517 (524)
T ss_dssp             TTTTEEEEECTTSEEEEEECSC
T ss_pred             CccHHHHhhccCceEEEEEccc
Confidence            4   999999999999999864

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1e-39  Score=302.30  Aligned_cols=293  Identities=20%  Similarity=0.409  Sum_probs=246.6

Q ss_pred             ecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        155 CLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      +.+|.+.|++++|+|+ +++|++|+.|++|+|||+.+.+..   ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~  113 (340)
T 4aow_A           34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW  113 (340)
T ss_dssp             ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence            4589999999999997 689999999999999999865432   345678899999999999999999999999999999


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      +............+...+..+.+++++++|++++.|+.+++||.......              ......+...+..++|
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~--------------~~~~~~~~~~v~~~~~  179 (340)
T 4aow_A          114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY--------------TVQDESHSEWVSCVRF  179 (340)
T ss_dssp             ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE--------------EECSSSCSSCEEEEEE
T ss_pred             eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE--------------EEEeccccCcccceEE
Confidence            99999999999889999999999999999999999999999998876532              2333456788999999


Q ss_pred             cCCC--CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        311 LPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       311 ~~~~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      ++++  .++++++.|+.|++||+++.  .....+..|...|.+++|+|+++  ++++++.|+.|++||++....      
T Consensus       180 ~~~~~~~~~~s~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~Dg~i~iwd~~~~~~------  249 (340)
T 4aow_A          180 SPNSSNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGS--LCASGGKDGQAMLWDLNEGKH------  249 (340)
T ss_dssp             CSCSSSCEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSS--EEEEEETTCEEEEEETTTTEE------
T ss_pred             ccCCCCcEEEEEcCCCEEEEEECCCC--ceeeEecCCCCcEEEEEECCCCC--EEEEEeCCCeEEEEEeccCce------
Confidence            8864  57889999999999999876  45566778889999999999998  899999999999999986432      


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee-------cccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA-------ELTSSAPACYALAISPDSKVCFSCCSDG  461 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~~l~~s~~~~~l~s~~~dg  461 (504)
                      .....+...+.+++|+|++.++ +++.|+.|++||+++.......       ....|...|++++|+||+++|++|+.||
T Consensus       250 ~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg  328 (340)
T 4aow_A          250 LYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN  328 (340)
T ss_dssp             EEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred             eeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            2223456789999999998755 5567999999999876433222       2346788999999999999999999999


Q ss_pred             cEEEEEcCCcc
Q psy17188        462 NIAVWDLHNQT  472 (504)
Q Consensus       462 ~i~iwd~~~~~  472 (504)
                      .|+|||+++|+
T Consensus       329 ~v~iW~~~tGt  339 (340)
T 4aow_A          329 LVRVWQVTIGT  339 (340)
T ss_dssp             CEEEEEEEC--
T ss_pred             EEEEEeCCCcC
Confidence            99999999885

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8.2e-41  Score=313.03  Aligned_cols=309  Identities=17%  Similarity=0.251  Sum_probs=246.8

Q ss_pred             cCCCcEEEEEEcCC---C--cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCEEEEecCCC
Q psy17188        111 SHGEVVCAVTISNP---T--KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRTLIVGGEAS  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~~---~--~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~dg  181 (504)
                      +|.+.|++++|+|+   +  .++++++++.|++||+.+++....+.......|...|.+++|+|+    +++|++++.||
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg   95 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG   95 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence            79999999999983   3  366666688999999987655444544444447889999999998    67999999999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADG  257 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~  257 (504)
                      .|++||+.+++.  ...+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+   ..|...|.+++|+|++
T Consensus        96 ~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  173 (366)
T 3k26_A           96 IIRIINPITMQC--IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG  173 (366)
T ss_dssp             EEEEECTTTCCE--EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred             EEEEEEchhceE--eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence            999999987653  566788999999999999 8999999999999999999999999888   7899999999999999


Q ss_pred             CEEEEEcCCCeEEEEECCCCceEE-Eee----cCCCCC--------CCcccceecccCCceEEEEEcCCCCEEEEEeCCC
Q psy17188        258 TKLWTGGLDNTVRSWDLREGCVKV-WDI----SQPGSK--------TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  324 (504)
Q Consensus       258 ~~l~s~~~dg~i~~wd~~~~~~~~-~~~----~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  324 (504)
                      ++|++++.||.|++||+++++... +..    ......        ..........+...|.+++|+  ++++++++.|+
T Consensus       174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~  251 (366)
T 3k26_A          174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN  251 (366)
T ss_dssp             SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS
T ss_pred             CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC
Confidence            999999999999999999765210 000    000000        000011112378889999998  77999999999


Q ss_pred             cEEEEeCCCCCc------------cceeeeccCCCceeeEEECCC--CCCceeeeccCCCeEEEEecCCCCCCC-ccccc
Q psy17188        325 NLSIWDLASPTP------------RIKAELTSSAPACYALAISPD--SKSPFFSSHHYKSCVKVWDISQPGSKT-PVSQL  389 (504)
Q Consensus       325 ~i~v~d~~~~~~------------~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~  389 (504)
                      .|++||+.+...            .....+..|...+.+++|+|+  ++  ++++++.|+.|++||+....... ....+
T Consensus       252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  329 (366)
T 3k26_A          252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK--MLALGNQVGKLYVWDLEVEDPHKAKCTTL  329 (366)
T ss_dssp             EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS--EEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred             EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc--EEEEEecCCcEEEEECCCCCCccccceEE
Confidence            999999987654            335566778889999999999  66  89999999999999998754332 12223


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ....+...|.+++|+|++++|++++.||.|++||+.
T Consensus       330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            333347899999999999999999999999999985

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-41  Score=325.23  Aligned_cols=353  Identities=12%  Similarity=0.181  Sum_probs=260.1

Q ss_pred             ccceeee--cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        104 ARQINTL--SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       104 ~~~~~~~--~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      .+.+..+  +|.+.|++++|+| ++++|++++ |++|+|||+.+.+............|...|.+++|+|++++|++++.
T Consensus        52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~  131 (437)
T 3gre_A           52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK  131 (437)
T ss_dssp             CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred             ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC
Confidence            3445555  6899999999999 999999998 99999999876211111111122258999999999999999999999


Q ss_pred             CCcEEEEeCC---CCCccce------eee--ec--CcCceEEEE--ECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-
Q psy17188        180 ASNLSIWDLA---SPTPRIK------AEL--TS--SAPACYALA--ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-  243 (504)
Q Consensus       180 dg~i~iw~~~---~~~~~~~------~~~--~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  243 (504)
                      |+.|++||+.   +++....      ..+  ..  +...+.++.  +++++.+|++++.|+.|++||+++++.+..+.+ 
T Consensus       132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (437)
T 3gre_A          132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS  211 (437)
T ss_dssp             TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence            9999999995   3322111      011  11  455566666  567899999999999999999999999999988 


Q ss_pred             -CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC----CCCEEE
Q psy17188        244 -HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP----DGRTLI  318 (504)
Q Consensus       244 -h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~  318 (504)
                       |...|.+++|+|++++|++++.||.|++||+++++..              ......+...|.+++|+|    ++++|+
T Consensus       212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~s~~~~~l~  277 (437)
T 3gre_A          212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI--------------RSWSFGDHAPITHVEVCQFYGKNSVIVV  277 (437)
T ss_dssp             GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE--------------EEEBCTTCEEEEEEEECTTTCTTEEEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE--------------EEEecCCCCceEEEEeccccCCCccEEE
Confidence             8999999999999999999999999999999987642              111125567899996664    678999


Q ss_pred             EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      +++.|+.|++||++++  .....+..+...+..+.++|+++.  +.    +..                 +....|...|
T Consensus       278 s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--l~----~~~-----------------~~~~~~~~~v  332 (437)
T 3gre_A          278 GGSSKTFLTIWNFVKG--HCQYAFINSDEQPSMEHFLPIEKG--LE----ELN-----------------FCGIRSLNAL  332 (437)
T ss_dssp             EESTTEEEEEEETTTT--EEEEEEESSSSCCCGGGGSCBCSS--GG----GCC-----------------CCCCCSGGGG
T ss_pred             EEcCCCcEEEEEcCCC--cEEEEEEcCCCCCccceecccccc--cc----cce-----------------ecccccCCce
Confidence            9999999999999877  455566777777888888887763  20    000                 1112367789


Q ss_pred             EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188        399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  477 (504)
                      .+++|+ ++++|++++.|+.|++||+.+++........ .....+....++++..+++..        |+...+......
T Consensus       333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  403 (437)
T 3gre_A          333 STISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDS  403 (437)
T ss_dssp             CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC----------
T ss_pred             EEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCcc
Confidence            999999 7899999999999999999987655444322 234445566677666655544        333444555666


Q ss_pred             eecCCceEEEEEccC--CCEEEEecCCCC
Q psy17188        478 QGHTDGASCIDISAD--GTKLWTGGLDNT  504 (504)
Q Consensus       478 ~~h~~~v~~~~~s~d--~~~l~s~s~Dgt  504 (504)
                      ..|.+.|++++|+++  +.+|++|+.||+
T Consensus       404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~  432 (437)
T 3gre_A          404 LYHHDIINSISTCEVDETPLLVACDNSGL  432 (437)
T ss_dssp             ---CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred             cccccceeeEeeeccCCceEEEEEcCCce
Confidence            779999999999998  889999999985

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5.5e-40  Score=332.96  Aligned_cols=289  Identities=22%  Similarity=0.415  Sum_probs=229.3

Q ss_pred             cCCCcEEEEEEcCCC-cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPT-KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~-~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +|.+.|++++|+|++ ++|++++ |++|++|++...............+|...|.+++|+|++++|++|+.|++|+|||+
T Consensus       380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~  459 (694)
T 3dm0_A          380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL  459 (694)
T ss_dssp             CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            899999999999864 7898888 99999999987544333333445589999999999999999999999999999999


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCC--CEEEEE
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADG--TKLWTG  263 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~--~~l~s~  263 (504)
                      .+++  ....+.+|...|.+++|+|++++|++++.|++|++||+.........   .+|...|.+++|+|++  ..|+++
T Consensus       460 ~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~  537 (694)
T 3dm0_A          460 AAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA  537 (694)
T ss_dssp             TTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred             CCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence            8754  35677899999999999999999999999999999998765443332   4689999999999986  589999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.|++|++||++++++               ......|...|.+++|+|++++|++++.|+.|++||+++++..  ..+.
T Consensus       538 s~d~~v~vwd~~~~~~---------------~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~--~~~~  600 (694)
T 3dm0_A          538 SWDKTVKVWNLSNCKL---------------RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL--YSLE  600 (694)
T ss_dssp             ETTSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE--ECCB
T ss_pred             eCCCeEEEEECCCCcE---------------EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE--EEec
Confidence            9999999999998764               3334568889999999999999999999999999999876311  1111


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                                                                        +...+.+++|+|++.+|++++ ++.|++||
T Consensus       601 --------------------------------------------------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd  629 (694)
T 3dm0_A          601 --------------------------------------------------ANSVIHALCFSPNRYWLCAAT-EHGIKIWD  629 (694)
T ss_dssp             --------------------------------------------------CSSCEEEEEECSSSSEEEEEE-TTEEEEEE
T ss_pred             --------------------------------------------------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEE
Confidence                                                              122355777777776666554 34477777


Q ss_pred             CCCCCcceeecc-----------------cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        424 LASPTPRIKAEL-----------------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       424 ~~~~~~~~~~~~-----------------~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      +++++.......                 ..+...+++++|+||+++|++|+.||.|+||++.
T Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            766543322211                 1122347889999999999999999999999985

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-40  Score=318.10  Aligned_cols=329  Identities=17%  Similarity=0.161  Sum_probs=253.5

Q ss_pred             cCCCCCCCcceEEEECCCCC-cccCCCCCCcccCCCC----Ccccc-----ceeee-c----------CCCcEEEEEEcC
Q psy17188         65 LAGIPGGKPAYSYHVTTDGQ-MQPVPFPPDALIGPGI----PRHAR-----QINTL-S----------HGEVVCAVTISN  123 (504)
Q Consensus        65 ~~~~~~~~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~----~~~~~-----~~~~~-~----------h~~~V~~v~~s~  123 (504)
                      +..+...+.|.+++|+|+|+ .++.+..++.+.+|+.    .....     ....+ .          |.+.|++++|+|
T Consensus        39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  118 (425)
T 1r5m_A           39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH  118 (425)
T ss_dssp             CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred             eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence            33444457899999999998 8888888888888887    44331     23333 2          688999999999


Q ss_pred             CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecC
Q psy17188        124 PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS  202 (504)
Q Consensus       124 ~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  202 (504)
                      ++++|++++ |+.|++||...    ..+.  ....|...|.+++|+|++++|++++.|+.|++||+.+++.  ...+..+
T Consensus       119 ~~~~l~~~~~dg~i~i~~~~~----~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~  190 (425)
T 1r5m_A          119 DGNSIVTGVENGELRLWNKTG----ALLN--VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV--MQHFELK  190 (425)
T ss_dssp             TSSEEEEEETTSCEEEEETTS----CEEE--EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE--EEEECCC
T ss_pred             CCCEEEEEeCCCeEEEEeCCC----Ceee--eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE--EEEeecc
Confidence            999999988 99999999332    2222  2337899999999999999999999999999999987653  4445555


Q ss_pred             cCc---------------eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        203 APA---------------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       203 ~~~---------------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                      ...               +.+++|++++ .+++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  269 (425)
T 1r5m_A          191 ETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG  269 (425)
T ss_dssp             ---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred             ccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence            555               8899999885 688899999999999999999999999999999999999999999999999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP  347 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~  347 (504)
                      .|++||+++++.               ......+...+.+++|+|++ .+++++.|+.|++||+++.+  ....+..+..
T Consensus       270 ~i~i~d~~~~~~---------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~  331 (425)
T 1r5m_A          270 TLRIWHGGNGNS---------------QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--LLALSIVDGV  331 (425)
T ss_dssp             CEEEECSSSBSC---------------SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE--EEEEEECTTC
T ss_pred             EEEEEECCCCcc---------------ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc--EeEecccCCc
Confidence            999999988753               23334577889999999999 99999999999999998753  2223333333


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      .                                                 +.+++|+|++++|++++.||.|++||+.+.
T Consensus       332 ~-------------------------------------------------i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~  362 (425)
T 1r5m_A          332 P-------------------------------------------------IFAGRISQDGQKYAVAFMDGQVNVYDLKKL  362 (425)
T ss_dssp             C-------------------------------------------------EEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred             c-------------------------------------------------EEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence            4                                                 445555555555555555555555555433


Q ss_pred             C------------------cceeecccCCCC--ceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        428 T------------------PRIKAELTSSAP--ACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       428 ~------------------~~~~~~~~~~~~--~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      +                  ......+..|..  .|++++|+|++++|++++.||.|++||++
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          363 NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             HC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             ccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            2                  113444556655  89999999999999999999999999985

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=6.1e-41  Score=320.81  Aligned_cols=306  Identities=16%  Similarity=0.207  Sum_probs=228.8

Q ss_pred             cCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~  187 (504)
                      +|+..|+||+|+| ++++||+|+ ||.|+|||+.++..   ...+...+|.+.|++++|+| ++++|++++.|++|++||
T Consensus       117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC---CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence            7999999999999 567899988 99999999987532   23334458999999999998 789999999999999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCC
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLD  266 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d  266 (504)
                      +++...........+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++++.|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d  272 (435)
T 4e54_B          194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD  272 (435)
T ss_dssp             TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred             ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence            9865433333333445567899999999999999999999999986 456778899999999999999876 78899999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      ++|++||+++.+..            ........|...|.+++|+|++++|++++.|+.|++||+.+.+....  +..|.
T Consensus       273 ~~v~iwd~~~~~~~------------~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~--~~~~~  338 (435)
T 4e54_B          273 QTVKIWDLRQVRGK------------ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG--LIPHP  338 (435)
T ss_dssp             SBCCEEETTTCCSS------------SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE--ECCCC
T ss_pred             ceeeEEeccccccc------------ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE--Eeccc
Confidence            99999999876521            01233356788999999999999999999999999999987643222  11111


Q ss_pred             C------ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcE
Q psy17188        347 P------ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNL  419 (504)
Q Consensus       347 ~------~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i  419 (504)
                      .      .+....|+|+                                      ..+..+.+++++..+++++ .++.|
T Consensus       339 ~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~d~~~~~~~~~~~~~i  380 (435)
T 4e54_B          339 HRHFQHLTPIKAAWHPR--------------------------------------YNLIVVGRYPDPNFKSCTPYELRTI  380 (435)
T ss_dssp             CCCCSSSCCCBCEECSS--------------------------------------SSCEEEECCCCTTSCCSSTTCCCCE
T ss_pred             ccccccceeEEEEEcCC--------------------------------------CCEEEEEEcCCCCeEEEEecCCCEE
Confidence            0      0111122222                                      2233455556665555444 44679


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEE-EECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYAL-AISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                      ++||..+++..... ...|...|.++ +|+|++++|++|+ |+.|+||++++++..
T Consensus       381 ~iwd~~~g~~~~~l-~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          381 DVFDGNSGKMMCQL-YDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             EEECSSSCCEEEEE-CCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             EEEECCCCcEEEEE-eCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence            99999988655433 34566677776 6999999999876 789999999988753

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.3e-39  Score=311.23  Aligned_cols=322  Identities=17%  Similarity=0.344  Sum_probs=265.6

Q ss_pred             eeee-cCCCc-EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        107 INTL-SHGEV-VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       107 ~~~~-~h~~~-V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ...+ +|.+. ++++.+  ++++|++++ ||.|++||+.+++.   +.  ...+|...|.+++|+  +++|++++.|++|
T Consensus       111 ~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~---~~--~~~~h~~~v~~~~~~--~~~l~s~~~dg~i  181 (445)
T 2ovr_B          111 PKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKC---LR--TLVGHTGGVWSSQMR--DNIIISGSTDRTL  181 (445)
T ss_dssp             CEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE---EE--ECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred             eEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcE---EE--EEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence            3444 89886 466555  588999888 99999999987632   22  233799999999997  6799999999999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ++||+.+++  ....+.+|...|.++.|+  ++.+++++.|+.|++||+.+++.+..+.+|...|.+++|  ++++++++
T Consensus       182 ~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  255 (445)
T 2ovr_B          182 KVWNAETGE--CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSG  255 (445)
T ss_dssp             EEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEE
T ss_pred             EEEECCcCc--EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEE
Confidence            999998765  366778999999999995  568999999999999999999999999999999999999  67899999


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.||.|++||+++++.               ......|...+.++.|  +++++++++.|+.|++||+++++  ....+.
T Consensus       256 ~~dg~i~iwd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~  316 (445)
T 2ovr_B          256 AYDFMVKVWDPETETC---------------LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--CIHTLT  316 (445)
T ss_dssp             ETTSCEEEEEGGGTEE---------------EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC--EEEEEC
T ss_pred             cCCCEEEEEECCCCcE---------------eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC--EEEEEc
Confidence            9999999999998764               2233457788999999  78899999999999999998874  455667


Q ss_pred             cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      .|...+.++.+.++    ++++++.|+.|++||++.......+.  ....|...|.+++|+  +++|++++.||.|++||
T Consensus       317 ~~~~~v~~~~~~~~----~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd  388 (445)
T 2ovr_B          317 GHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQCLQTLQ--GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD  388 (445)
T ss_dssp             CCCSCEEEEEEETT----EEEEEETTSCEEEEETTTCCEEEEEC--STTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred             CCcccEEEEEEeCC----EEEEEeCCCeEEEEECCCCcEEEEEc--cCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence            78888888887543    89999999999999997653322111  112377889999996  57999999999999999


Q ss_pred             CCCCCcceeec---ccCCCCceeEEEECCCCCEEEEeeCCCc----EEEEEcCC
Q psy17188        424 LASPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDGN----IAVWDLHN  470 (504)
Q Consensus       424 ~~~~~~~~~~~---~~~~~~~v~~l~~s~~~~~l~s~~~dg~----i~iwd~~~  470 (504)
                      +.+++......   ...+...|++++|+|++.+|++++.||+    |.|||+..
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          389 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             TTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence            99887655442   2467788999999999999999999998    99999875

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.5e-40  Score=317.43  Aligned_cols=328  Identities=16%  Similarity=0.185  Sum_probs=261.1

Q ss_pred             ceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceee
Q psy17188         74 AYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQ  152 (504)
Q Consensus        74 v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~  152 (504)
                      +..++|+|+|+.++.+..++.+.+|+............| ..+....|++++++|++++ |+.|++||+.++.   ..  
T Consensus        59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~--  132 (420)
T 3vl1_A           59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QR--  132 (420)
T ss_dssp             CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EE--
T ss_pred             ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---ee--
Confidence            446789999998888888888888877654433222244 6666678999999999998 9999999987642   11  


Q ss_pred             eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188        153 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       153 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~  232 (504)
                      .....|...|++++|+|++++|++++.|+.|++||+.+++.  ...+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus       133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  210 (420)
T 3vl1_A          133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN--PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC  210 (420)
T ss_dssp             EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC--CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence            22237999999999999999999999999999999987654  5667889999999999999999999999999999999


Q ss_pred             CCCeEEEeecC---CCCCeEEE---------------------EEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188        233 HNQTLVRQFQG---HTDGASCI---------------------DISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG  288 (504)
Q Consensus       233 ~~~~~~~~~~~---h~~~v~~~---------------------~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~  288 (504)
                      ++++.+..+..   |...+.++                     +|+|++++|++++.||.|++||+++++..        
T Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~--------  282 (420)
T 3vl1_A          211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT--------  282 (420)
T ss_dssp             TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE--------
T ss_pred             CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee--------
Confidence            99999988875   33444444                     45788999999999999999999988642        


Q ss_pred             CCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                            ......+...+.+++|+|+++ +|++++.||.|++||+++.+.........+...+..+.+. +++  ++++++
T Consensus       283 ------~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~--~l~s~~  353 (420)
T 3vl1_A          283 ------IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGA--LFVSSG  353 (420)
T ss_dssp             ------EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTE--EEEEET
T ss_pred             ------EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCC--EEEEec
Confidence                  111234677899999999998 9999999999999999987543333333366677888554 555  899999


Q ss_pred             CCCeEEEEecCCCCCCCccc----ccccccCCCceEEEEEcCCCC---EEEEeeCCCcEEEeeCCC
Q psy17188        368 YKSCVKVWDISQPGSKTPVS----QLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       368 ~~~~i~i~d~~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~g~---~l~~~~~dg~i~iwd~~~  426 (504)
                      .|+.|++|++..........    ......+...|.+++|+|+++   .+++.+.+|.+.+|++++
T Consensus       354 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          354 FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             CCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence            99999999998754433222    112345778899999999999   777778899999999874

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=3.4e-39  Score=310.08  Aligned_cols=308  Identities=19%  Similarity=0.382  Sum_probs=261.4

Q ss_pred             CCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        157 QRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       157 ~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                      +|.+.+ .+  +++++++|++|+.||.|++||+.+++  ....+.+|...|.+++|+  +++|++++.||.|++||+.++
T Consensus       116 ~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~  189 (445)
T 2ovr_B          116 GHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG  189 (445)
T ss_dssp             CSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred             ccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence            677765 54  55578999999999999999998765  366778999999999997  569999999999999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      +.+..+.+|...|.++.|+  ++.+++++.||.|++||+++++.               ......|...+.++++  +++
T Consensus       190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~  250 (445)
T 2ovr_B          190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC---------------LHVLMGHVAAVRCVQY--DGR  250 (445)
T ss_dssp             EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE---------------EEEEECCSSCEEEEEE--CSS
T ss_pred             cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE---------------EEEEcCCcccEEEEEE--CCC
Confidence            9999999999999999996  56899999999999999998864               2333467888999999  788


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      ++++++.|+.|++||+++.  .....+..|...+.++.+  ++.  .+++++.|+.|++||+++.....     ....|.
T Consensus       251 ~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~--~~~--~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~  319 (445)
T 2ovr_B          251 RVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQF--DGI--HVVSGSLDTSIRVWDVETGNCIH-----TLTGHQ  319 (445)
T ss_dssp             CEEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEE--CSS--EEEEEETTSCEEEEETTTCCEEE-----EECCCC
T ss_pred             EEEEEcCCCEEEEEECCCC--cEeEEecCCCCceEEEEE--CCC--EEEEEeCCCeEEEEECCCCCEEE-----EEcCCc
Confidence            9999999999999999876  455666788889999999  444  79999999999999998754322     223566


Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc-cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                      ..+.++.+  ++++|++++.||.|++||+++++....... ..|...|++++|+  +++|++++.||.|++||+.+++.+
T Consensus       320 ~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~  395 (445)
T 2ovr_B          320 SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI  395 (445)
T ss_dssp             SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred             ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee
Confidence            77777777  467999999999999999998766554433 2378889999995  689999999999999999999999


Q ss_pred             EEE-----eecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        475 RQF-----QGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       475 ~~~-----~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+     ..|.+.|++++|+|++.+|++|+.||+
T Consensus       396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~  430 (445)
T 2ovr_B          396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT  430 (445)
T ss_dssp             EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred             eeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence            888     468889999999999999999999985

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-39  Score=301.13  Aligned_cols=288  Identities=17%  Similarity=0.242  Sum_probs=250.2

Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEE
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRS  271 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~  271 (504)
                      .......+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus        21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i  100 (369)
T 3zwl_B           21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL  100 (369)
T ss_dssp             CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred             cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            34456678899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCCcc---------
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPR---------  337 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~---------  337 (504)
                      ||+.+++.                .....+...+.+++|+|+++++++++.+     +.|++||+......         
T Consensus       101 wd~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~  164 (369)
T 3zwl_B          101 WDVSNGQC----------------VATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE  164 (369)
T ss_dssp             EETTTCCE----------------EEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred             EECCCCcE----------------EEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence            99998874                2233477889999999999999999999     99999999766432         


Q ss_pred             ceeeeccCCC--ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC
Q psy17188        338 IKAELTSSAP--ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  415 (504)
Q Consensus       338 ~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~  415 (504)
                      .......+..  .+.+++|+|+++  ++++++.++.|++||++....    .......+...|.+++|+|++++|++++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  238 (369)
T 3zwl_B          165 PIHKIITHEGLDAATVAGWSTKGK--YIIAGHKDGKISKYDVSNNYE----YVDSIDLHEKSISDMQFSPDLTYFITSSR  238 (369)
T ss_dssp             CSEEEECCTTCCCEEEEEECGGGC--EEEEEETTSEEEEEETTTTTE----EEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             eeeeccCCcCccceeEEEEcCCCC--EEEEEcCCCEEEEEECCCCcE----eEEEEecCCCceeEEEECCCCCEEEEecC
Confidence            2223334444  899999999998  789999999999999976311    12223357888999999999999999999


Q ss_pred             CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC--------------cEEEEEcCCcceEEEEeecC
Q psy17188        416 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------------NIAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~h~  481 (504)
                      |+.|++||+++++......   +...+..++|+|+++++++++.++              .+++||+.+++.+..+.+|.
T Consensus       239 d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~  315 (369)
T 3zwl_B          239 DTNSFLVDVSTLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF  315 (369)
T ss_dssp             TSEEEEEETTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred             CceEEEEECCCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence            9999999999877655544   566799999999999999999988              89999999999999999999


Q ss_pred             CceEEEEEccCCCEEEEecCCCC
Q psy17188        482 DGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       482 ~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..|++++|+|++++|++++.||+
T Consensus       316 ~~v~~~~~s~~~~~l~s~~~dg~  338 (369)
T 3zwl_B          316 GPLNTVAISPQGTSYASGGEDGF  338 (369)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSE
T ss_pred             CcEEEEEECCCCCEEEEEcCCCe
Confidence            99999999999999999999984

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=308.18  Aligned_cols=303  Identities=16%  Similarity=0.233  Sum_probs=242.4

Q ss_pred             ecCCCCceEEEEEccCCCEE-EEecC---CCcEEEEeCCCCCccceeeeecCcCceEEEEECCC---CCEEEEEeCCCcE
Q psy17188        155 CLQRDNYIRSVKLLPDGRTL-IVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNI  227 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l-~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i  227 (504)
                      ..+|...|.+++|+|+++.+ ++++.   |+.|++||+.+++... .....|...|.+++|+|+   +++|++++.|+.|
T Consensus        14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i   92 (357)
T 3i2n_A           14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL   92 (357)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred             ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence            34699999999999998655 45655   8999999999766432 223478889999999998   6999999999999


Q ss_pred             EEEECCCCe-EEEeecCCCCCeEEEEE------ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        228 AVWDLHNQT-LVRQFQGHTDGASCIDI------SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       228 ~iwd~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      ++||+.+++ .+..+.+|...|.+++|      +|++++|++++.|+.|++||+++++.....+.          .....
T Consensus        93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~----------~~~~~  162 (357)
T 3i2n_A           93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME----------PVQGE  162 (357)
T ss_dssp             EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC----------CCTTS
T ss_pred             EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc----------ccCCC
Confidence            999999988 88889999999999965      67899999999999999999998752111000          00111


Q ss_pred             cCCceEEEE----EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECC---CCCCceeeeccCCCeEE
Q psy17188        301 RDNYIRSVK----LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP---DSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       301 ~~~~v~~~~----~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~i~  373 (504)
                      ....+.+++    |+|+++++++++.|+.|++||+++.+.   .....+...+.+++|+|   ++.  .+++++.++.|+
T Consensus       163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~--~l~~~~~dg~i~  237 (357)
T 3i2n_A          163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDRKDISMN--KLVATSLEGKFH  237 (357)
T ss_dssp             CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESCSSSSCC--EEEEEESTTEEE
T ss_pred             CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCCCCCCCC--EEEEECCCCeEE
Confidence            234688888    788999999999999999999988753   33455677999999999   777  789999999999


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCCCCcc-----------------eeecc
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPR-----------------IKAEL  435 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~~~~~-----------------~~~~~  435 (504)
                      +||++...............|...|.+++|+|+++ +|++++.||.|++||++.+...                 ....+
T Consensus       238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  317 (357)
T 3i2n_A          238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV  317 (357)
T ss_dssp             EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred             EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence            99998765444443333346889999999999998 8999999999999999865432                 34556


Q ss_pred             cCCCCceeEEEECCCCCEEE-EeeCCCcEEEEEcCCcce
Q psy17188        436 TSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~~~~  473 (504)
                      ..|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus       318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            77889999999999999998 899999999999987654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-39  Score=302.30  Aligned_cols=312  Identities=14%  Similarity=0.213  Sum_probs=258.5

Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      ......+.+|...|++++|+|++++|++++.|+.|++||+.+++  ....+..|...|.+++|+|++++|++++.|+.|+
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~   99 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK   99 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred             ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence            44555666899999999999999999999999999999998765  3667788999999999999999999999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEE-EeecCCCCCCCcccceecccC
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      +||+.+++.+..+. +...|.+++|+|++++|++++.+     +.|++||+..+.... +....   .............
T Consensus       100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~  175 (369)
T 3zwl_B          100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS---EEPIHKIITHEGL  175 (369)
T ss_dssp             EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC---SSCSEEEECCTTC
T ss_pred             EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc---cceeeeccCCcCc
Confidence            99999999999988 89999999999999999999999     999999988654210 00000   0011112212222


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      ..+.+++|+|++++|++++.||.|++||+++.. .....+..+...+.+++|+|+++  ++++++.|+.|++||++....
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~~  252 (369)
T 3zwl_B          176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDLT--YFITSSRDTNSFLVDVSTLQV  252 (369)
T ss_dssp             CCEEEEEECGGGCEEEEEETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCE
T ss_pred             cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCCC--EEEEecCCceEEEEECCCCce
Confidence            389999999999999999999999999998732 45566777888999999999988  789999999999999986532


Q ss_pred             CCcccccccccCCCceEEEEEcCCCCEEEEeeCCC--------------cEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--------------NLSIWDLASPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      ...      ..+...+..++|+|+++++++++.++              .+++||..+++..  ..+..|...|++++|+
T Consensus       253 ~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~s  324 (369)
T 3zwl_B          253 LKK------YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI--GRVQGHFGPLNTVAIS  324 (369)
T ss_dssp             EEE------EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE--EEEECCSSCEEEEEEC
T ss_pred             eee------ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch--hheecccCcEEEEEEC
Confidence            222      23677899999999999999999988              8999999877544  4456788899999999


Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188        449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  477 (504)
                      |++++|++++.||.|++|+++++.....+
T Consensus       325 ~~~~~l~s~~~dg~v~iw~~~~~~~~~~~  353 (369)
T 3zwl_B          325 PQGTSYASGGEDGFIRLHHFEKSYFDFKY  353 (369)
T ss_dssp             TTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred             CCCCEEEEEcCCCeEEEEECccccchhHH
Confidence            99999999999999999999877654443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-39  Score=306.10  Aligned_cols=290  Identities=19%  Similarity=0.303  Sum_probs=238.8

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  240 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~  240 (504)
                      .+.++.|++  ..+++++.|+.|++||+.+++..... ...|...|.+++|+|++++|++++.||.|++||+.+++.+..
T Consensus        95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~-~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~  171 (401)
T 4aez_A           95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALA-ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT  171 (401)
T ss_dssp             TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEee-ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE
Confidence            456677765  55778889999999999987653222 223788999999999999999999999999999999999999


Q ss_pred             ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      +.+|...|.+++|+  ++.|++++.||.|++||++.....              ......|...|.+++|+|++++|+++
T Consensus       172 ~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~l~s~  235 (401)
T 4aez_A          172 MAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ--------------IGTLQGHSSEVCGLAWRSDGLQLASG  235 (401)
T ss_dssp             ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             ecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce--------------eeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence            99999999999994  579999999999999999854321              33345678899999999999999999


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      +.|+.|++||+++.  .....+..|...+.+++|+|++.. ++++++  .|+.|++||+.......      ...+...+
T Consensus       236 ~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~-ll~~~~gs~d~~i~i~d~~~~~~~~------~~~~~~~v  306 (401)
T 4aez_A          236 GNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSN-LLATGGGTMDKQIHFWNAATGARVN------TVDAGSQV  306 (401)
T ss_dssp             ETTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTT-EEEEECCTTTCEEEEEETTTCCEEE------EEECSSCE
T ss_pred             eCCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCC-EEEEecCCCCCEEEEEECCCCCEEE------EEeCCCcE
Confidence            99999999999876  445566778889999999998876 555544  89999999998653222      22456789


Q ss_pred             EEEEEcCCCCEEEE--eeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188        399 RSVKLLPDGRTLIV--GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       399 ~~~~~s~~g~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      .+++|+|++++|++  |+.||.|++||+.+++......+..|...|.+++|+|++++|++++.||.|++|++.+++.+..
T Consensus       307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~  386 (401)
T 4aez_A          307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR  386 (401)
T ss_dssp             EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred             EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence            99999999999999  5589999999999876666667788999999999999999999999999999999999988765


Q ss_pred             Ee
Q psy17188        477 FQ  478 (504)
Q Consensus       477 ~~  478 (504)
                      ..
T Consensus       387 ~~  388 (401)
T 4aez_A          387 PI  388 (401)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-41  Score=316.20  Aligned_cols=322  Identities=11%  Similarity=0.076  Sum_probs=252.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .-...|.+++|+|||+++|+++ |++|+  |.+.+   ..+     .+|...|.+++|+|+|       .++.+.+|+.+
T Consensus        13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l-----~gh~~~v~~V~FsPdg-------~~~~~~~~~~~   75 (588)
T 2j04_A           13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDI-----NCNSKNLFHVKEFPLE-------FENKLDFELAQ   75 (588)
T ss_dssp             CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCC-----SSBGGGTEEEEEECCC-------CCCTTTTSCCC
T ss_pred             HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---cee-----cCCCccEEEEEECCCC-------CcceEEEEeCC
Confidence            3458899999999999999999 99999  64443   222     2799999999999999       45665555543


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCC-----CeEEEEEccCCCEEEEEc
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISADGTKLWTGG  264 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~  264 (504)
                         ......+ .|...|.+++|+|+|++|++++.||.|++||.+.  ++..+. |..     .+.+++|+|||++|++|+
T Consensus        76 ---~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs  148 (588)
T 2j04_A           76 ---QNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN  148 (588)
T ss_dssp             ---SSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred             ---CceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc
Confidence               2222322 3478899999999999999999999999999544  667777 665     499999999999999999


Q ss_pred             CCCeEEEEECCCCce------EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc-
Q psy17188        265 LDNTVRSWDLREGCV------KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-  337 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-  337 (504)
                      .||+|++||+.++.+      .+..+          .....+|...|.+++|+|+|  +++++.|+.+++||+...... 
T Consensus       149 ~DGtVkIWd~~~~~l~~~~~i~l~ti----------~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~  216 (588)
T 2j04_A          149 EDGELQFFSIRKNSENTPEFYFESSI----------RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP  216 (588)
T ss_dssp             TTSEEEEEECCCCTTTCCCCEEEEEE----------ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred             CCCEEEEEECCCCccccccceeeeee----------ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence            999999999998752      10000          01124467899999999999  888889999999999886532 


Q ss_pred             ceeee-ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE--cCCCCEEEEee
Q psy17188        338 IKAEL-TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL--LPDGRTLIVGG  414 (504)
Q Consensus       338 ~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~~~~  414 (504)
                      ....+ ..|...|.+++|+  ++  .+++++ ++.|++||+......    .. ..+|...+..++|  +||+..|++++
T Consensus       217 ~~~tL~~~h~~~V~svaFs--g~--~LASa~-~~tIkLWd~~~~~~~----~~-~~gh~~~V~~va~~~s~d~~~La~a~  286 (588)
T 2j04_A          217 VSRMIQNASRRKITDLKIV--DY--KVVLTC-PGYVHKIDLKNYSIS----SL-KTGSLENFHIIPLNHEKESTILLMSN  286 (588)
T ss_dssp             CEEEEECCCSSCCCCEEEE--TT--EEEEEC-SSEEEEEETTTTEEE----EE-ECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred             ceeeecccccCcEEEEEEE--CC--EEEEEe-CCeEEEEECCCCeEE----EE-EcCCCceEEEEEeeeCCCCCEEEEEc
Confidence            22334 3677899999999  34  677776 699999998764211    11 2268889999999  99999999999


Q ss_pred             CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      ++|+ ++|..+                  .++++||+..+++.  |+++++|+...+. +..+.+ ...|.+++|||||+
T Consensus       287 edG~-klw~~d------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~  343 (588)
T 2j04_A          287 KTSY-KVLLED------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGY  343 (588)
T ss_dssp             SCEE-EEEESS------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSS
T ss_pred             CCCC-EEEeec------------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCC
Confidence            9999 999876                  14799999988875  9999999975554 445554 66799999999999


Q ss_pred             EEEEecC
Q psy17188        495 KLWTGGL  501 (504)
Q Consensus       495 ~l~s~s~  501 (504)
                      .+|+++.
T Consensus       344 ~lA~~~~  350 (588)
T 2j04_A          344 SIAIVYD  350 (588)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            9999874

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.6e-38  Score=302.61  Aligned_cols=308  Identities=17%  Similarity=0.285  Sum_probs=245.7

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      .+-+++.|+||++ +.||+|. |++|+|||..+++......+.+|...|++++|+|++++|++|+.||.|++||+++++.
T Consensus       104 ~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~  181 (420)
T 4gga_A          104 NDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR  181 (420)
T ss_dssp             CCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             ccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence            3456788999975 5777775 8999999999988666666778888999999999999999999999999999999999


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      +..+.+|...+.++.++  +..|++++.|+.+++||.......              ......|...+..+.++|+++++
T Consensus       182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~--------------~~~~~~h~~~~~~~~~~~~g~~l  245 (420)
T 4gga_A          182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH--------------VATLSGHSQEVCGLRWAPDGRHL  245 (420)
T ss_dssp             EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEE
T ss_pred             EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee--------------eEEecccccceeeeeecCCCCee
Confidence            99999999999998875  679999999999999998876532              23345678889999999999999


Q ss_pred             EEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCCCceee-eccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        318 IVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSKSPFFS-SHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      ++++.|+.+++|+...++..  .......+...|..++|+|++...+.. +++.|+.|++||+.++...      .....
T Consensus       246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~------~~~~~  319 (420)
T 4gga_A          246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL------SAVDA  319 (420)
T ss_dssp             EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE------EEEEC
T ss_pred             eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc------eeecc
Confidence            99999999999999876532  345567788899999999988874333 4678999999999875322      22234


Q ss_pred             CCceEEEEEcCCCCEEEEee--CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        395 DNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ...+.++.|+|+++.+++++  .|+.|++||+.+++.  ...+.+|...|++++|+||+++|++|+.|++|+|||+.+..
T Consensus       320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~--v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            56789999999999988765  789999999998764  44567899999999999999999999999999999998877


Q ss_pred             eEEEEeecCCceEEEEEcc
Q psy17188        473 LVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       473 ~~~~~~~h~~~v~~~~~s~  491 (504)
                      .....+.+...+....|..
T Consensus       398 ~~~~~~~~~~~~~~~s~~~  416 (420)
T 4gga_A          398 PARRREREKASAAKSSLIH  416 (420)
T ss_dssp             CC-----------------
T ss_pred             ccchhhhccCCccccccCC
Confidence            7766666665554444443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.5e-39  Score=305.18  Aligned_cols=298  Identities=14%  Similarity=0.131  Sum_probs=246.6

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .|...|.+++|+|++++|++++.|+.|++||+.+++......+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   85 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence            47889999999999999999999999999999876544577788999999999999999999999999999999999887


Q ss_pred             EEEe--ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      ....  +..|...|.+++|+|++++|++++.|+.|++||++.+.....           .......|...|.+++|+|++
T Consensus        86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~  154 (372)
T 1k8k_C           86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV-----------CKHIKKPIRSTVLSLDWHPNS  154 (372)
T ss_dssp             EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE-----------EEEECTTCCSCEEEEEECTTS
T ss_pred             eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee-----------eeeeecccCCCeeEEEEcCCC
Confidence            5444  466999999999999999999999999999999987752100           012224567889999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCC----------------CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        315 RTLIVGGEASNLSIWDLAS----------------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      ++|++++.|+.|++||++.                ........+..|...+.+++|+|+++  ++++++.|+.|++||++
T Consensus       155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~  232 (372)
T 1k8k_C          155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS--RVAWVSHDSTVCLADAD  232 (372)
T ss_dssp             SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS--EEEEEETTTEEEEEEGG
T ss_pred             CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC--EEEEEeCCCEEEEEECC
Confidence            9999999999999999752                12345556667888999999999998  89999999999999998


Q ss_pred             CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC--CCcce-------------------------
Q psy17188        379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS--PTPRI-------------------------  431 (504)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~--~~~~~-------------------------  431 (504)
                      ......     ....+...|.+++|+|++++|+++ .|+.|++|++.+  ++...                         
T Consensus       233 ~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (372)
T 1k8k_C          233 KKMAVA-----TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD  306 (372)
T ss_dssp             GTTEEE-----EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred             CCceeE-----EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcc
Confidence            653222     223567789999999999988887 899999999987  31000                         


Q ss_pred             -----e------ecc-cCCCCceeEEEEC-CCC---CEEEEeeCCCcEEEEEcCCcce
Q psy17188        432 -----K------AEL-TSSAPACYALAIS-PDS---KVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       432 -----~------~~~-~~~~~~v~~l~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                           .      ..+ .+|...|++++|. +++   ++|++++.||.|++||+.+++.
T Consensus       307 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          307 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             CCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred             cccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence                 0      222 4788999999966 676   9999999999999999987654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=8.4e-39  Score=309.30  Aligned_cols=319  Identities=19%  Similarity=0.303  Sum_probs=258.8

Q ss_pred             ceeee-cCCCc-EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        106 QINTL-SHGEV-VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       106 ~~~~~-~h~~~-V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      ....+ +|.+. ++++.+  ++++|++++ ||+|++||+.+++   .+.  ...+|.+.|.+++|+|++ +|++|+.||+
T Consensus       113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~---~~~--~~~~h~~~V~~l~~~~~~-~l~s~s~dg~  184 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---FLL--QLSGHDGGVWALKYAHGG-ILVSGSTDRT  184 (464)
T ss_dssp             EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE---EEE--EECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred             ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc---EEE--EEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence            33444 88777 577776  466888887 9999999998753   222  233799999999999988 9999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECCCCe-----------------------E
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLHNQT-----------------------L  237 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~~~~-----------------------~  237 (504)
                      |++||+.+++  ....+.+|...|.+++|+  +++++|++++.|+.|++||+.+++                       .
T Consensus       185 i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (464)
T 3v7d_B          185 VRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF  262 (464)
T ss_dssp             EEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred             EEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence            9999998765  466778899999999998  577899999999999999998765                       2


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      +..+.+|...|.++  +++++++++++.|+.|++||+++++.               ......|...|.+++|+|+++++
T Consensus       263 ~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~l  325 (464)
T 3v7d_B          263 VGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC---------------LYILSGHTDRIYSTIYDHERKRC  325 (464)
T ss_dssp             EEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEEETTTTEE
T ss_pred             EEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE---------------EEEecCCCCCEEEEEEcCCCCEE
Confidence            55678899998887  56788999999999999999998874               23345678889999999999999


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      ++++.|+.|++||++++  .....+..|...+.++++++  +  ++++++.|+.|++||+......      ....+...
T Consensus       326 ~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~--~--~l~s~s~dg~v~vwd~~~~~~~------~~~~~~~~  393 (464)
T 3v7d_B          326 ISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLSD--K--FLVSAAADGSIRGWDANDYSRK------FSYHHTNL  393 (464)
T ss_dssp             EEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECS--S--EEEEEETTSEEEEEETTTCCEE------EEEECTTC
T ss_pred             EEEeCCCcEEEEECCCC--cEEEEEeCCCCcEEEEEEcC--C--EEEEEeCCCcEEEEECCCCcee------eeecCCCC
Confidence            99999999999999887  45667778999999999984  2  8999999999999999864321      11235666


Q ss_pred             eEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      +..++|++++++|++++ ||.|++||+++++.+.. ....+...|.+++|+ +..++++++.||.+.+|
T Consensus       394 ~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~-~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          394 SAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA-NILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             CCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES-CTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred             ccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh-hhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence            77899999999999998 89999999998875543 245568889999997 34555566667765554

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.9e-39  Score=303.77  Aligned_cols=296  Identities=15%  Similarity=0.207  Sum_probs=238.6

Q ss_pred             CCCCceEEEEEccC----CCEEEEecCCCcEEEEeCCCCCccceeeee-----cCcCceEEEEECCC----CCEEEEEeC
Q psy17188        157 QRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDLASPTPRIKAELT-----SSAPACYALAISPD----SKVCFSCCS  223 (504)
Q Consensus       157 ~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~----~~~l~~~~~  223 (504)
                      +|...|++++|+|+    ...+++++.++.|++||+.+++..  ..+.     .|...|.+++|+|+    +++|++++.
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~   93 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI--RLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS   93 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE--EeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence            79999999999984    456666666779999999865532  2222     25678999999998    679999999


Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      ||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....            ......+.
T Consensus        94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~~~~~~~  161 (366)
T 3k26_A           94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI------------FGGVEGHR  161 (366)
T ss_dssp             TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE------------ECSTTSCS
T ss_pred             CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE------------eccccccc
Confidence            99999999999999999999999999999999 899999999999999999998864210            00014678


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce--------------------------eeeccCCCceeeEEECC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK--------------------------AELTSSAPACYALAISP  356 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--------------------------~~~~~~~~~i~~~~~~~  356 (504)
                      ..|.+++|+|++++|++++.|+.|++||+++.+....                          .....|...+.+++|+ 
T Consensus       162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-  240 (366)
T 3k26_A          162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-  240 (366)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred             CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence            8999999999999999999999999999987532211                          1122378899999998 


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCc---------ccccccccCCCceEEEEEcCC--CCEEEEeeCCCcEEEeeCC
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTP---------VSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~---------~~~~~~~~~~~~i~~~~~s~~--g~~l~~~~~dg~i~iwd~~  425 (504)
                       ++  ++++++.|+.|++||+........         ........|...|.+++|+|+  +++|++++.||.|++||+.
T Consensus       241 -~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~  317 (366)
T 3k26_A          241 -GD--LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE  317 (366)
T ss_dssp             -TT--EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred             -CC--EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence             33  899999999999999987543111         112223346778999999999  9999999999999999999


Q ss_pred             CCCcce--eecccCC--CCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        426 SPTPRI--KAELTSS--APACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       426 ~~~~~~--~~~~~~~--~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      +++...  ...+..|  ...|++++|+|++++|++++.||.|++||+.+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  366 (366)
T 3k26_A          318 VEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR  366 (366)
T ss_dssp             SSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             CCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence            876442  2234444  78999999999999999999999999999853

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.5e-38  Score=307.56  Aligned_cols=325  Identities=15%  Similarity=0.268  Sum_probs=259.2

Q ss_pred             cCCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        156 LQRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       156 ~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      .+|...+ .++.+  ++++|++|+.||+|++||+.+++  ....+.+|...|.+++|++++ +|++++.||+|++||+++
T Consensus       118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~  192 (464)
T 3v7d_B          118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK  192 (464)
T ss_dssp             ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred             cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc--EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence            3777764 66665  57899999999999999998765  466778999999999999988 999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEc--cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC--------CCCCcccceecccCCc
Q psy17188        235 QTLVRQFQGHTDGASCIDIS--ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG--------SKTPVSQLDCLQRDNY  304 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~  304 (504)
                      ++.+..+.+|...|.+++|+  +++++|++++.|++|++||++++...........        ...+........|...
T Consensus       193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (464)
T 3v7d_B          193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS  272 (464)
T ss_dssp             TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred             CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence            99999999999999999998  4778999999999999999987653211000000        0000012233456666


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      +.++  +++++++++++.|+.|++||+++.  .....+..|...+.+++|+|+++  .+++++.|+.|++||++++... 
T Consensus       273 v~~~--~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~--~l~sg~~dg~i~vwd~~~~~~~-  345 (464)
T 3v7d_B          273 VRTV--SGHGNIVVSGSYDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERK--RCISASMDTTIRIWDLENGELM-  345 (464)
T ss_dssp             EEEE--EEETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTTEEE-
T ss_pred             EEEE--cCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCcEE-
Confidence            6666  677899999999999999999876  45566778889999999999998  8999999999999999865322 


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  464 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~  464 (504)
                          .....|...|.+++|+  +++|++++.||.|++||+.+........   +...+..++|++++++|++++ ||.|+
T Consensus       346 ----~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~  415 (464)
T 3v7d_B          346 ----YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFN  415 (464)
T ss_dssp             ----EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEE
T ss_pred             ----EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEE
Confidence                2234678899999997  5799999999999999999876443332   445577789999999999998 89999


Q ss_pred             EEEcCCcceEEE-EeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        465 VWDLHNQTLVRQ-FQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       465 iwd~~~~~~~~~-~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +||+.+++++.. +..|...|++++|+ +...+++++.||
T Consensus       416 iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g  454 (464)
T 3v7d_B          416 IYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDG  454 (464)
T ss_dssp             EEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETT
T ss_pred             EEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCC
Confidence            999999999876 66788999999997 344555555554

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-40  Score=312.95  Aligned_cols=341  Identities=13%  Similarity=0.089  Sum_probs=231.0

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  190 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  190 (504)
                      |.+.|++++|+|++++|++++ |+.|+|||+.++.   ........+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~   86 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG---WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP   86 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE---EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc---eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence            567999999999999999997 9999999998641   012222337999999999999999999999999999999987


Q ss_pred             CC-ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEeecC-CCCCeEEEEEccCCCEEEEEcC
Q psy17188        191 PT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQG-HTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       191 ~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      ++ ......+..|...|.+++|+|++++|++++.|+.|++||+++++   ....+.. |...|.+++|+|++++|++++.
T Consensus        87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~  166 (377)
T 3dwl_C           87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA  166 (377)
T ss_dssp             --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred             CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence            66 44466677899999999999999999999999999999999887   4677777 9999999999999999999999


Q ss_pred             CCeEEEEECCCCceEEEeecCCC-CC-CCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccc--eee
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPG-SK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI--KAE  341 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~  341 (504)
                      |+.|++||++.+....-...... .. ..........|...|.+++|+|++++|++++.|+.|++||+++.+...  ...
T Consensus       167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  246 (377)
T 3dwl_C          167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT  246 (377)
T ss_dssp             SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred             CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence            99999999975432110000000 00 000011112788889999999999999999999999999999875422  566


Q ss_pred             eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC-------------CCceEEEEEcCCCC
Q psy17188        342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR-------------DNYIRSVKLLPDGR  408 (504)
Q Consensus       342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~g~  408 (504)
                      +..|...+.+++|+|+++  ++++++.++.+ +|+........ ...+.....             ......+.|++...
T Consensus       247 ~~~~~~~v~~~~~s~~~~--~l~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (377)
T 3dwl_C          247 VKLSQLPLRSLLWANESA--IVAAGYNYSPI-LLQGNESGWAH-TRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRS  322 (377)
T ss_dssp             EECSSSCEEEEEEEETTE--EEEEESSSSEE-EECCCC---CC-SBCCCSCCCCCCBSSSSSBCCCCCC-----------
T ss_pred             ecCCCCceEEEEEcCCCC--EEEEEcCCcEE-EEEeCCCceEE-Eeeecccccccccccccccccccccccccccccccc
Confidence            778888999999999998  77887766665 77665322110 001100000             01133444443332


Q ss_pred             EEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC-C---EEEEeeCCCcEEEEEc
Q psy17188        409 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-K---VCFSCCSDGNIAVWDL  468 (504)
Q Consensus       409 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~-~---~l~s~~~dg~i~iwd~  468 (504)
                      .+......|...         ........|...|+++++.++. .   .|++++.||.|+|||+
T Consensus       323 ~~~~~~~~g~~~---------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          323 TFRNMDLKGSSQ---------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccchhhccccc---------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            222222222111         1122345688899999976543 3   6999999999999985

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.2e-39  Score=306.92  Aligned_cols=303  Identities=13%  Similarity=0.204  Sum_probs=244.7

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC----ccceeeeecCcCceEEEEECCC----C---CEEEEEeC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT----PRIKAELTSSAPACYALAISPD----S---KVCFSCCS  223 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~  223 (504)
                      ..+|.+.|++++|+|  ++|++++.||.|++|++.+.+    ......+..|...|.+++|+|+    +   ++|++++.
T Consensus        12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~   89 (397)
T 1sq9_A           12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF   89 (397)
T ss_dssp             SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred             hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence            347999999999998  899999999999999998766    3346677899999999999999    9   99999999


Q ss_pred             CCcEEEEECCCCeE-----EEeecCC-----CCCeEEEEEc----cCCCE-EEEEcCCCeEEEEECCC------CceEEE
Q psy17188        224 DGNIAVWDLHNQTL-----VRQFQGH-----TDGASCIDIS----ADGTK-LWTGGLDNTVRSWDLRE------GCVKVW  282 (504)
Q Consensus       224 dg~i~iwd~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~~wd~~~------~~~~~~  282 (504)
                      |+.|++||+.+++.     +..+..|     ...|.+++|+    |++++ |++++.||.|++||+++      ++...+
T Consensus        90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  169 (397)
T 1sq9_A           90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW  169 (397)
T ss_dssp             TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred             CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence            99999999998876     8888888     5999999999    99999 99999999999999987      432100


Q ss_pred             eecCCCCCCCccccee-----cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc---C---CCceee
Q psy17188        283 DISQPGSKTPVSQLDC-----LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS---S---APACYA  351 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---~---~~~i~~  351 (504)
                      .        +...+..     ..+...+.+++|+|++ ++++++.|+.|++||+++.  .....+..   |   ...+.+
T Consensus       170 ~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i~~  238 (397)
T 1sq9_A          170 S--------PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL--RPLYNFESQHSMINNSNSIRS  238 (397)
T ss_dssp             C--------CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--EEEEEEECCC---CCCCCEEE
T ss_pred             c--------CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--ceeEEEeccccccccCCccce
Confidence            0        0001111     3467889999999999 9999999999999999876  44455555   7   889999


Q ss_pred             EEECCCCCCceeeeccCC---CeEEEEecCCCCCCCccccc--------ccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        352 LAISPDSKSPFFSSHHYK---SCVKVWDISQPGSKTPVSQL--------DCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~---~~i~i~d~~~~~~~~~~~~~--------~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      ++|+|+++  ++++++.+   +.|++||++.......+...        ....|...|.+++|+|++++|++++.||.|+
T Consensus       239 i~~~~~~~--~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  316 (397)
T 1sq9_A          239 VKFSPQGS--LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR  316 (397)
T ss_dssp             EEECSSTT--EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred             EEECCCCC--EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence            99999988  78899999   99999999865322221110        0001788999999999999999999999999


Q ss_pred             EeeCCCCCcceeeccc----CC---------------CCceeEEEECCCC----------CEEEEeeCCCcEEEEEcCCc
Q psy17188        421 IWDLASPTPRIKAELT----SS---------------APACYALAISPDS----------KVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~----~~---------------~~~v~~l~~s~~~----------~~l~s~~~dg~i~iwd~~~~  471 (504)
                      +||+++++........    .|               ...|++++|+|++          ++|++++.||.|++|++++|
T Consensus       317 iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          317 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             EEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            9999987655444311    45               7889999999998          79999999999999999876


Q ss_pred             c
Q psy17188        472 T  472 (504)
Q Consensus       472 ~  472 (504)
                      +
T Consensus       397 ~  397 (397)
T 1sq9_A          397 K  397 (397)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-40  Score=320.45  Aligned_cols=311  Identities=11%  Similarity=0.048  Sum_probs=220.2

Q ss_pred             ccCCCEEEEecCCCcEEEEeCCCCCccc--eeeeecCcCceEEEEECCC------CCEEEEEeCCCcEEEEECCCCeE--
Q psy17188        168 LPDGRTLIVGGEASNLSIWDLASPTPRI--KAELTSSAPACYALAISPD------SKVCFSCCSDGNIAVWDLHNQTL--  237 (504)
Q Consensus       168 s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~iwd~~~~~~--  237 (504)
                      +|+++.|++++.|++|+||++.+++...  ...+..|...|.+++|+|+      +.+|++++.||+|++||+.+++.  
T Consensus       170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~  249 (524)
T 2j04_B          170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV  249 (524)
T ss_dssp             ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred             chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence            3444455667788999999998765322  2345677888999999996      57999999999999999987632  


Q ss_pred             ---------EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        238 ---------VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       238 ---------~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                               ...+.+|...|++++|++++ .|++|+.||+|++||++++...              ......|...|.++
T Consensus       250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~--------------~~~~~~H~~~V~sv  314 (524)
T 2j04_B          250 HVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP--------------SFYDQVHDSYILSV  314 (524)
T ss_dssp             SEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC--------------SEEEECSSSCEEEE
T ss_pred             ccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc--------------eEEeecccccEEEE
Confidence                     23677899999999999864 8999999999999999876310              22345688899999


Q ss_pred             --EEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188        309 --KLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP  385 (504)
Q Consensus       309 --~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~  385 (504)
                        +|++++ ++|++++.|++|++||+++.+.............+.+++|+|+++  .+++++.|+.|++||++...... 
T Consensus       315 ~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~--~l~s~~~d~tv~lwd~~~~~~~~-  391 (524)
T 2j04_B          315 STAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY--SYIYSDGASSLRAVPSRAAFAVH-  391 (524)
T ss_dssp             EEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT--EEEEECSSSEEEEEETTCTTCCE-
T ss_pred             EEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC--eEEEeCCCCcEEEEECcccccce-
Confidence              578887 899999999999999998764332222112223578999999988  68899999999999998754322 


Q ss_pred             ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-c--cCCCCceeEEEECCCCCEEEEeeCCCc
Q psy17188        386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-L--TSSAPACYALAISPDSKVCFSCCSDGN  462 (504)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~--~~~~~~v~~l~~s~~~~~l~s~~~dg~  462 (504)
                          ....|...|.+++|+|+|++|++|+.|++|++||+.... ..... .  ..+...+..++|+|+++.+.. ..+  
T Consensus       392 ----~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~-~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~~--  463 (524)
T 2j04_B          392 ----PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRL-LHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DSS--  463 (524)
T ss_dssp             ----EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST-TTCC------CCCCEEEECBCCSSSCEEEE-CCC--
T ss_pred             ----eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh-ccccccCccceeeeEEEEeccCCCCCeEEc-cCC--
Confidence                223688999999999999999999999999999986531 11100 0  012224678999999986532 222  


Q ss_pred             EEEEEcC-CcceEEEEeecCCceEEEEEccCCC---EEEEecCCCC
Q psy17188        463 IAVWDLH-NQTLVRQFQGHTDGASCIDISADGT---KLWTGGLDNT  504 (504)
Q Consensus       463 i~iwd~~-~~~~~~~~~~h~~~v~~~~~s~d~~---~l~s~s~Dgt  504 (504)
                      +.+|+.. ++.++..+.+|...|++++|+|+++   +|++|+.||+
T Consensus       464 ~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~  509 (524)
T 2j04_B          464 YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGL  509 (524)
T ss_dssp             CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred             ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCce
Confidence            3444443 5777888999999999999999964   9999999985

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=301.71  Aligned_cols=296  Identities=15%  Similarity=0.225  Sum_probs=240.7

Q ss_pred             cCCCcEEEEEEcCCCc-EEEEec----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC---CCEEEEecCCCc
Q psy17188        111 SHGEVVCAVTISNPTK-YVYTGG----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGEASN  182 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~-~l~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~  182 (504)
                      +|.+.|.+++|+|++. ++++++    |+.|+|||+.+++.    ......+|...|.+++|+|+   +++|++++.|+.
T Consensus        16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~   91 (357)
T 3i2n_A           16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL----KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN   91 (357)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE----EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred             CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc----cceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence            7999999999999885 555553    79999999987532    22223368899999999998   699999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEE------ECCCCCEEEEEeCCCcEEEEECCCCe-EEEeecCCCC----CeEEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALA------ISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTD----GASCI  251 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~h~~----~v~~~  251 (504)
                      |++||+.+++. ....+.+|...|.++.      |+|++++|++++.|+.|++||+++++ .+..+..|.+    .+.++
T Consensus        92 i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~  170 (357)
T 3i2n_A           92 LHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV  170 (357)
T ss_dssp             EEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred             EEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence            99999987652 3566788999999995      57899999999999999999999886 6777766555    78999


Q ss_pred             E----EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC---CCCEEEEEeCCC
Q psy17188        252 D----ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEAS  324 (504)
Q Consensus       252 ~----~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg  324 (504)
                      +    |+|++++|++++.|+.|++||+++++.                .....+...+.+++|+|   ++++|++++.||
T Consensus       171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg  234 (357)
T 3i2n_A          171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL----------------RWETNIKNGVCSLEFDRKDISMNKLVATSLEG  234 (357)
T ss_dssp             EEECCCC-CCCEEEEEETTSEEEEEETTTTEE----------------EEEEECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred             EEEeccCCCCCEEEEEccCCeEEEEECccCce----------------eeecCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence            8    678999999999999999999999873                23355678899999999   999999999999


Q ss_pred             cEEEEeCCCCCcccee---eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc--------------cc
Q psy17188        325 NLSIWDLASPTPRIKA---ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP--------------VS  387 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~--------------~~  387 (504)
                      .|++||+++.+.....   ....|...+.+++|+|+++. ++++++.|+.|++||++.......              ..
T Consensus       235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~  313 (357)
T 3i2n_A          235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRE-LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL  313 (357)
T ss_dssp             EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred             eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCc-EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence            9999999876443332   23478889999999999874 688999999999999986543311              11


Q ss_pred             ccccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCCCCC
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPT  428 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~~~~  428 (504)
                      ......|...|.+++|+|++++|+ +++.|+.|++||+.+.+
T Consensus       314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            223445788999999999999998 79999999999998654

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.4e-38  Score=322.54  Aligned_cols=283  Identities=20%  Similarity=0.404  Sum_probs=234.1

Q ss_pred             ecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCCCCc---cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEE
Q psy17188        155 CLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW  230 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  230 (504)
                      +.+|.+.|++++|+|+ +++|++|+.|++|++|++.....   .....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus       378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw  457 (694)
T 3dm0_A          378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW  457 (694)
T ss_dssp             EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            4489999999999986 47999999999999999976432   2345678999999999999999999999999999999


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      |+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||.........            ......|...|.+++|
T Consensus       458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~------------~~~~~~h~~~v~~~~~  525 (694)
T 3dm0_A          458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI------------SEGGEGHRDWVSCVRF  525 (694)
T ss_dssp             ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE------------CSSTTSCSSCEEEEEE
T ss_pred             ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceee------------ccCCCCCCCcEEEEEE
Confidence            9999999999999999999999999999999999999999999876542211            1112357778999999


Q ss_pred             cCCC--CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        311 LPDG--RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       311 ~~~~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      +|++  ..+++++.|+.|++||+++.+.  ...                                               
T Consensus       526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~-----------------------------------------------  556 (694)
T 3dm0_A          526 SPNTLQPTIVSASWDKTVKVWNLSNCKL--RST-----------------------------------------------  556 (694)
T ss_dssp             CSCSSSCEEEEEETTSCEEEEETTTCCE--EEE-----------------------------------------------
T ss_pred             eCCCCcceEEEEeCCCeEEEEECCCCcE--EEE-----------------------------------------------
Confidence            9986  5799999999999999876421  000                                               


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                        ...|...|.+++|+|++++|++++.||.|++||+.+++.+..  +. +...+.+++|+|++.+|++++ ++.|+|||+
T Consensus       557 --~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~--~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~  630 (694)
T 3dm0_A          557 --LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS--LE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDL  630 (694)
T ss_dssp             --ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC--CB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEET
T ss_pred             --EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE--ec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEEC
Confidence              013566788999999999999999999999999998754433  22 345699999999999888776 456999999


Q ss_pred             CCcceEEEEeecC-------------------CceEEEEEccCCCEEEEecCCCC
Q psy17188        469 HNQTLVRQFQGHT-------------------DGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       469 ~~~~~~~~~~~h~-------------------~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      .+++.+..+..+.                   ..+++++|+|||++|++|+.||+
T Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~  685 (694)
T 3dm0_A          631 ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV  685 (694)
T ss_dssp             TTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE
T ss_pred             CCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe
Confidence            9999887775322                   13789999999999999999985

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.8e-39  Score=301.76  Aligned_cols=310  Identities=13%  Similarity=0.128  Sum_probs=242.3

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .|.+.|++++|+|++++|++++ |+.|++||+++++ ...+.  ...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVH--ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-EEEEE--EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-EEeee--eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            4889999999999999999997 9999999997642 01222  233789999999999999999999999999999998


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEeecCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      +++......+..|...|.+++|+|++++|++++.|+.|++||++.++    .......|...|.+++|+|++++|++++.
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  162 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  162 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence            77655555567789999999999999999999999999999998875    23334678999999999999999999999


Q ss_pred             CCeEEEEECCCCceEEEeecCC---CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        266 DNTVRSWDLREGCVKVWDISQP---GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      |+.|++||++............   .............+...+.+++|+|++++|++++.|+.|++||+++.+  ....+
T Consensus       163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~  240 (372)
T 1k8k_C          163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--AVATL  240 (372)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--EEEEE
T ss_pred             CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--eeEEE
Confidence            9999999975322100000000   000000122233677889999999999999999999999999998774  55566


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC--CC----------------------------CCCccc-----
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ--PG----------------------------SKTPVS-----  387 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~--~~----------------------------~~~~~~-----  387 (504)
                      ..+...+.+++|+|++.  +++++ .|+.|++|+++.  +.                            ......     
T Consensus       241 ~~~~~~v~~~~~~~~~~--~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (372)
T 1k8k_C          241 ASETLPLLAVTFITESS--LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA  317 (372)
T ss_dssp             ECSSCCEEEEEEEETTE--EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred             ccCCCCeEEEEEecCCC--EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence            77888999999999987  66666 899999999987  21                            000000     


Q ss_pred             -ccccccCCCceEEEEEc-CCC---CEEEEeeCCCcEEEeeCCCCC
Q psy17188        388 -QLDCLQRDNYIRSVKLL-PDG---RTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       388 -~~~~~~~~~~i~~~~~s-~~g---~~l~~~~~dg~i~iwd~~~~~  428 (504)
                       ......|...|++++|. ++|   .+|++++.||.|++||+++++
T Consensus       318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence             11113688899999966 676   999999999999999987543

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-38  Score=288.81  Aligned_cols=293  Identities=17%  Similarity=0.261  Sum_probs=237.7

Q ss_pred             ccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188        104 ARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  181 (504)
Q Consensus       104 ~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  181 (504)
                      .+.+..+ +|.+.|++++| +++++|++++ ||.|++||+.++.   ...  ....|...|.+++|+|++++|++++.|+
T Consensus         8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg   81 (313)
T 3odt_A            8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW---LGT--VVYTGQGFLNSVCYDSEKELLLFGGKDT   81 (313)
T ss_dssp             CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE---EEE--EEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred             HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE---EEE--EeecCCccEEEEEECCCCCEEEEecCCC
Confidence            3555666 89999999999 8898899888 9999999997642   222  2236889999999999999999999999


Q ss_pred             cEEEEeCCCCC-ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc-CCCE
Q psy17188        182 NLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA-DGTK  259 (504)
Q Consensus       182 ~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~  259 (504)
                      .|++|++.... ......+..|...|.+++|  ++++|++++.|+.|++||  .++.+..+..|...+.+++|.| ++++
T Consensus        82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~  157 (313)
T 3odt_A           82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK  157 (313)
T ss_dssp             CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred             eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence            99999987643 2345667889999999999  577999999999999999  7788888999999999999998 8999


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      +++++.|+.|++||.....                ......+...+.+++|+|++. +++++.|+.|++||+++++..  
T Consensus       158 l~~~~~d~~i~i~d~~~~~----------------~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~--  218 (313)
T 3odt_A          158 FLTASADKTIKLWQNDKVI----------------KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL--  218 (313)
T ss_dssp             EEEEETTSCEEEEETTEEE----------------EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE--
T ss_pred             EEEEECCCCEEEEecCceE----------------EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh--
Confidence            9999999999999943221                111223678899999999998 899999999999998765211  


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      ..+                                                 ..|...|.+++|+|++ .|++++.||.|
T Consensus       219 ~~~-------------------------------------------------~~~~~~i~~~~~~~~~-~l~~~~~dg~v  248 (313)
T 3odt_A          219 RTY-------------------------------------------------EGHESFVYCIKLLPNG-DIVSCGEDRTV  248 (313)
T ss_dssp             EEE-------------------------------------------------ECCSSCEEEEEECTTS-CEEEEETTSEE
T ss_pred             hhh-------------------------------------------------hcCCceEEEEEEecCC-CEEEEecCCEE
Confidence            111                                                 1345668899999999 58899999999


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  478 (504)
                      ++||+++++...  .+..+...|++++|+|+++ +++++.||.|++||+++++.+....
T Consensus       249 ~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~  304 (313)
T 3odt_A          249 RIWSKENGSLKQ--VITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE  304 (313)
T ss_dssp             EEECTTTCCEEE--EEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred             EEEECCCCceeE--EEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence            999999876544  3456677899999999998 5678999999999999987765543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=5.6e-39  Score=299.00  Aligned_cols=295  Identities=13%  Similarity=0.134  Sum_probs=222.1

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-C-------CeEEEEeCCCCCCCCc-----eeeeeecCCCCceEEEEEccCCCEEEEe-
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-K-------GCVKVWDISQPGSKTP-----VSQLDCLQRDNYIRSVKLLPDGRTLIVG-  177 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d-------~~i~vw~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~-  177 (504)
                      -.-+|++++|+||+++|++|+ |       +.|++|+++.......     .....+.+|+..|.+++++  ++.+++| 
T Consensus        13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~   90 (365)
T 4h5i_A           13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC   90 (365)
T ss_dssp             CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred             CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence            346899999999999999986 2       3599999987543321     1223445778888888765  5566665 


Q ss_pred             ----------cCCCcEEEEeCCCCCcccee-------eeecCcCceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEE
Q psy17188        178 ----------GEASNLSIWDLASPTPRIKA-------ELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLV  238 (504)
Q Consensus       178 ----------~~dg~i~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~  238 (504)
                                +.|+.+++|++...+.....       ....+...+.+++|+|||++|++++  .|++|+|||+++++++
T Consensus        91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~  170 (365)
T 4h5i_A           91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK  170 (365)
T ss_dssp             CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred             CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence                      45788999998765432211       1123445688999999999877554  6899999999999999


Q ss_pred             EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188        239 RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  318 (504)
Q Consensus       239 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  318 (504)
                      ..+. |...|.+++|+|||++|++++.| .+++|+..+++...             ......+...+.+++|+|++++++
T Consensus       171 ~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~v~~v~fspdg~~l~  235 (365)
T 4h5i_A          171 FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIA-------------RKTDFDKNWSLSKINFIADDTVLI  235 (365)
T ss_dssp             EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEE-------------EECCCCTTEEEEEEEEEETTEEEE
T ss_pred             EEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCccee-------------eeecCCCCCCEEEEEEcCCCCEEE
Confidence            9887 88899999999999999999855 56667666665321             223345677899999999999999


Q ss_pred             EEeCCC----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        319 VGGEAS----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       319 ~~~~dg----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      +++.++    .+++|++........                                 +              ......|
T Consensus       236 ~~s~d~~~~~~i~~~~~~~~~~~~~---------------------------------~--------------~~~~~~~  268 (365)
T 4h5i_A          236 AASLKKGKGIVLTKISIKSGNTSVL---------------------------------R--------------SKQVTNR  268 (365)
T ss_dssp             EEEESSSCCEEEEEEEEETTEEEEE---------------------------------E--------------EEEEESS
T ss_pred             EEecCCcceeEEeecccccceecce---------------------------------e--------------eeeecCC
Confidence            998776    466676554311100                                 0              0111245


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      ...|++++|+|||++||+|+.|+.|+|||+++++.+. ..+.+|...|++++|+||+++||+|+.|++|+|||+...
T Consensus       269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~-~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK-IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE-EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE-EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            6678999999999999999999999999999775432 225679999999999999999999999999999999643

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=7.2e-38  Score=297.55  Aligned_cols=347  Identities=16%  Similarity=0.234  Sum_probs=236.6

Q ss_pred             ecCCCcEEEEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeee--------ecCCCCceEEEEEcc-CCCEEEEec
Q psy17188        110 LSHGEVVCAVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD--------CLQRDNYIRSVKLLP-DGRTLIVGG  178 (504)
Q Consensus       110 ~~h~~~V~~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~-~~~~l~~~~  178 (504)
                      .+|.+.|++++|+| ++++|++++ ||.|++||+.++..........        ...|...|.+++|+| ++++|++++
T Consensus        40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~  119 (408)
T 4a11_B           40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS  119 (408)
T ss_dssp             CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred             eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence            37999999999999 999999998 9999999999865544433211        124899999999999 788999999


Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC---CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEcc
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  255 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~  255 (504)
                      .|+.|++||+.+++..  .. ..+...+.++.|++.   +.++++++.|+.|++||+++++.+..+..|...|.+++|+|
T Consensus       120 ~d~~i~iwd~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~  196 (408)
T 4a11_B          120 FDKTLKVWDTNTLQTA--DV-FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP  196 (408)
T ss_dssp             TTSEEEEEETTTTEEE--EE-EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred             CCCeEEEeeCCCCccc--ee-ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence            9999999999876532  22 236677999999984   44999999999999999999999999999999999999999


Q ss_pred             CCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCC-CCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17188        256 DGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGS-KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       256 ~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~  333 (504)
                      +++ +|++++.||.|++||++++............ ...........+...|.+++|+|++++|++++.|+.|++||+.+
T Consensus       197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~  276 (408)
T 4a11_B          197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN  276 (408)
T ss_dssp             SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence            988 5899999999999999887533222221111 11111222346788899999999999999999999999999998


Q ss_pred             CCccceeeecc--CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        334 PTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       334 ~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      .+.........  .........+...... .++.++.++.|++||+.......     ....|...|.+++|+|++++|+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~  350 (408)
T 4a11_B          277 GENTLVNYGKVCNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGEQIT-----MLKGHYKTVDCCVFQSNFQELY  350 (408)
T ss_dssp             CCBCCCCCCCCCCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCCEEE-----EECCCSSCEEEEEEETTTTEEE
T ss_pred             CccceeccccccccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCccee-----eeccCCCeEEEEEEcCCCCEEE
Confidence            75433222111  1111112222222222 46666789999999998754322     2235788999999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-CCCEEEEeeCCCcEEEEEcCC
Q psy17188        412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      +++.||.|++||+++.+..........     ...+.+ +...+.+.+.++.+++|+...
T Consensus       351 s~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~~  405 (408)
T 4a11_B          351 SGSRDCNILAWVPSLYEPVPDDDETTT-----KSQLNPAFEDAWSSSDEEGGTSAWSHPQ  405 (408)
T ss_dssp             EEETTSCEEEEEECC---------------------------------------------
T ss_pred             EECCCCeEEEEeCCCCCccCCCCceEe-----ccccccccceeecccCccCceeecCCcc
Confidence            999999999999998765443222111     113333 334455677889999998653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=3.6e-38  Score=296.92  Aligned_cols=288  Identities=14%  Similarity=0.206  Sum_probs=236.0

Q ss_pred             ceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEeec--CCCCCeEEEEEcc-CCCEEEEEcCCCeEE
Q psy17188        195 IKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISA-DGTKLWTGGLDNTVR  270 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~~l~s~~~dg~i~  270 (504)
                      ....+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++....+.  +|...|.+++|+| ++++|++++.|+.|+
T Consensus        65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~  144 (383)
T 3ei3_B           65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT  144 (383)
T ss_dssp             EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred             eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence            355678899999999999998 899999999999999999887776665  6999999999999 778999999999999


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  350 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~  350 (504)
                      +||+++.....+             .....+...+.+++|+|++++|++++.|+.|++||++.   .....+..|...+.
T Consensus       145 iwd~~~~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h~~~v~  208 (383)
T 3ei3_B          145 LRDFSGSVIQVF-------------AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLHKAKVT  208 (383)
T ss_dssp             EEETTSCEEEEE-------------ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECSSSCEE
T ss_pred             EEECCCCceEEE-------------eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccCCCcEE
Confidence            999997654321             11223457799999999999999999999999999942   45667778899999


Q ss_pred             eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCc
Q psy17188        351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTP  429 (504)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~  429 (504)
                      +++|+|+++. ++++++.|+.|++||++.........  ....|...|.+++|+| ++++|++++.|+.|++||+++++.
T Consensus       209 ~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~  285 (383)
T 3ei3_B          209 HAEFNPRCDW-LMATSSVDATVKLWDLRNIKDKNSYI--AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK  285 (383)
T ss_dssp             EEEECSSCTT-EEEEEETTSEEEEEEGGGCCSTTCEE--EEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred             EEEECCCCCC-EEEEEeCCCEEEEEeCCCCCcccceE--EEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence            9999999876 78899999999999998754322221  2225788999999999 999999999999999999998765


Q ss_pred             ceeeccc-----CCC----------CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee--cCCceEEEEEccC
Q psy17188        430 RIKAELT-----SSA----------PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCIDISAD  492 (504)
Q Consensus       430 ~~~~~~~-----~~~----------~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~s~d  492 (504)
                      .......     .+.          ..+..++|+|++++  +++.|+.|++||+.+++++..+.+  |...+..++|+||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~  363 (383)
T 3ei3_B          286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT  363 (383)
T ss_dssp             CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT
T ss_pred             ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC
Confidence            4433211     112          23444666777766  778999999999999999999987  4577888899999


Q ss_pred             CCEEEEecCCCC
Q psy17188        493 GTKLWTGGLDNT  504 (504)
Q Consensus       493 ~~~l~s~s~Dgt  504 (504)
                      +++|++++ ||+
T Consensus       364 g~~l~s~s-d~~  374 (383)
T 3ei3_B          364 GDVLASGM-GFN  374 (383)
T ss_dssp             SSEEEEEE-TTE
T ss_pred             ccEEEEec-CCc
Confidence            99999997 763

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=301.27  Aligned_cols=322  Identities=14%  Similarity=0.165  Sum_probs=248.1

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeee-----------e
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAEL-----------T  200 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~  200 (504)
                      ++.+++|+++....   ...  ...|.+.|++++|+| ++++|++++.||.|++||+.+.+.......           .
T Consensus        22 ~~~~~v~~~~~~~~---~~~--~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~   96 (408)
T 4a11_B           22 ESTRRVLGLELNKD---RDV--ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPD   96 (408)
T ss_dssp             HHHHHHHTEEECTT---EEE--CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTT
T ss_pred             cCcceeeccccCcc---eee--eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccc
Confidence            45677888766432   222  226999999999999 999999999999999999998765433322           2


Q ss_pred             cCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC---CCEEEEEcCCCeEEEEECCC
Q psy17188        201 SSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD---GTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       201 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~  276 (504)
                      +|...|.+++|+| ++.+|++++.|+.|++||+.+++.+..+. +...+.++.+++.   +.++++++.|+.|++||+++
T Consensus        97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~  175 (408)
T 4a11_B           97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS  175 (408)
T ss_dssp             CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred             cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence            4899999999999 77899999999999999999999988887 8889999999984   45999999999999999998


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccce--------------ee
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIK--------------AE  341 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~--------------~~  341 (504)
                      ++.               ......|...|.+++|+|+++ .+++++.||.|++||+++......              ..
T Consensus       176 ~~~---------------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  240 (408)
T 4a11_B          176 GSC---------------SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA  240 (408)
T ss_dssp             SCC---------------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred             cce---------------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence            763               233446788999999999998 588999999999999987642211              11


Q ss_pred             eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188        342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  421 (504)
Q Consensus       342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i  421 (504)
                      ...|...+.+++|+|+++  ++++++.|+.|++||+....................+........+..+++++.++.|++
T Consensus       241 ~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  318 (408)
T 4a11_B          241 NTAHNGKVNGLCFTSDGL--HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV  318 (408)
T ss_dssp             SCSCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred             cccccCceeEEEEcCCCC--EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence            256778999999999988  899999999999999987654333222111112222223333344556777788999999


Q ss_pred             eeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        422 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       422 wd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      ||+.+++..  ..+..|...|++++|+|++++|++++.||.|++||+.+++.+.....
T Consensus       319 ~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~  374 (408)
T 4a11_B          319 YTVYSGEQI--TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE  374 (408)
T ss_dssp             EETTTCCEE--EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred             EECcCCcce--eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence            999987644  45567888999999999999999999999999999999988765543

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.4e-38  Score=301.28  Aligned_cols=295  Identities=17%  Similarity=0.250  Sum_probs=238.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCce-eeeeecCCCCceEEEEEccC----C---CEEEEecCCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPD----G---RTLIVGGEAS  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~dg  181 (504)
                      +|.+.|++++|+|  ++|++++ |+.|++|++.++...... .......|...|.+++|+|+    +   ++|++++.|+
T Consensus        14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg   91 (397)
T 1sq9_A           14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG   91 (397)
T ss_dssp             CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred             hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC
Confidence            8999999999999  6777777 999999999886422211 12233478999999999999    9   9999999999


Q ss_pred             cEEEEeCCCCCcc---ceeeeecC-----cCceEEEEEC----CCCCE-EEEEeCCCcEEEEECCC------CeEEE---
Q psy17188        182 NLSIWDLASPTPR---IKAELTSS-----APACYALAIS----PDSKV-CFSCCSDGNIAVWDLHN------QTLVR---  239 (504)
Q Consensus       182 ~i~iw~~~~~~~~---~~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~iwd~~~------~~~~~---  239 (504)
                      .|++|++.+++..   ....+..|     ...|.+++|+    |++++ |++++.|+.|++||+.+      ++.+.   
T Consensus        92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  171 (397)
T 1sq9_A           92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP  171 (397)
T ss_dssp             CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC
T ss_pred             CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccC
Confidence            9999999866531   14556667     5889999999    99999 99999999999999998      66555   


Q ss_pred             --ee-------cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc---c---CCc
Q psy17188        240 --QF-------QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ---R---DNY  304 (504)
Q Consensus       240 --~~-------~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~  304 (504)
                        .+       ..|...|.+++|+|++ +|++++.|+.|++||+++++..               .....   |   ...
T Consensus       172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~---------------~~~~~~~~h~~~~~~  235 (397)
T 1sq9_A          172 TLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL---------------YNFESQHSMINNSNS  235 (397)
T ss_dssp             EEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE---------------EEEECCC---CCCCC
T ss_pred             cceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee---------------EEEeccccccccCCc
Confidence              66       4489999999999999 9999999999999999987642               22223   5   788


Q ss_pred             eEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCccceeeecc-------------CCCceeeEEECCCCCCceeeeccC
Q psy17188        305 IRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTS-------------SAPACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                      +.+++|+|++++|++++.|   +.|++||+++.+  ....+..             |...+.+++|+|+++  ++++++.
T Consensus       236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~  311 (397)
T 1sq9_A          236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE--TLCSAGW  311 (397)
T ss_dssp             EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSS--EEEEEET
T ss_pred             cceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCC--EEEEEeC
Confidence            9999999999999999999   999999998774  4445555             888999999999998  8999999


Q ss_pred             CCeEEEEecCCCCCCCccccc-ccccC---------------CCceEEEEEcCCC----------CEEEEeeCCCcEEEe
Q psy17188        369 KSCVKVWDISQPGSKTPVSQL-DCLQR---------------DNYIRSVKLLPDG----------RTLIVGGEASNLSIW  422 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~~-~~~~~---------------~~~i~~~~~s~~g----------~~l~~~~~dg~i~iw  422 (504)
                      |+.|++||++.......+... ....|               ...|.+++|+|++          ++|++++.||.|++|
T Consensus       312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw  391 (397)
T 1sq9_A          312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF  391 (397)
T ss_dssp             TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred             CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence            999999999875432222200 00033               7889999999998          799999999999999


Q ss_pred             eCCCC
Q psy17188        423 DLASP  427 (504)
Q Consensus       423 d~~~~  427 (504)
                      +++++
T Consensus       392 ~~~~g  396 (397)
T 1sq9_A          392 REAGG  396 (397)
T ss_dssp             EEEC-
T ss_pred             EcCCC
Confidence            98765

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=4.3e-38  Score=284.91  Aligned_cols=257  Identities=15%  Similarity=0.273  Sum_probs=214.6

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+|...|++++|+|++++||+|+.|++|+|||+..........+.+|...|.+++|+++  +++|++++.|++|++||++
T Consensus         6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~   85 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE   85 (297)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred             cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence            47999999999999999999999999999999986554557788999999999999864  8899999999999999999


Q ss_pred             CCe--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        234 NQT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       234 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      +++  .+..+.+|...|.+++|+|+  +.+|++++.|++|++||++++...             .......|...|.+++
T Consensus        86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-------------~~~~~~~h~~~v~~~~  152 (297)
T 2pm7_B           86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSAS  152 (297)
T ss_dssp             SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-------------CCEEEECCSSCEEEEE
T ss_pred             CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-------------eeeeeecccCccceEe
Confidence            874  55677889999999999997  889999999999999999875310             0223456788899999


Q ss_pred             EcCC-------------CCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCC-CceeeeccCCCeEE
Q psy17188        310 LLPD-------------GRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSK-SPFFSSHHYKSCVK  373 (504)
Q Consensus       310 ~~~~-------------~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~i~  373 (504)
                      |+|+             +++|++++.|+.|++||+++....  ....+..|...|.+++|+|++. ..++++++.|+.|+
T Consensus       153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~  232 (297)
T 2pm7_B          153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI  232 (297)
T ss_dssp             ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred             ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence            9997             579999999999999999875422  4456778999999999999961 13899999999999


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      +||++...............+...|.+++|+|++++|++++.|+.|++|+..
T Consensus       233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence            9999764322111222223567889999999999999999999999999976

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.8e-38  Score=292.10  Aligned_cols=275  Identities=18%  Similarity=0.239  Sum_probs=230.8

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc-cceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEEC-C
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDL-H  233 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~-~  233 (504)
                      +|.+.|.+++|+|++++|++++.|+.|++|++.+++. ........|...|.+++|+|+++ +|++++.||.|++||+ .
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence            6899999999999999999999999999999987651 12344568999999999999999 9999999999999999 7


Q ss_pred             CCeEEEeecC--CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC---------CceEEEeecCCCCCCCcccceecccC
Q psy17188        234 NQTLVRQFQG--HTDGASCIDISADGTKLWTGGLDNTVRSWDLRE---------GCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       234 ~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      +++. ..+.+  |...|.+++|+| +++|++++.|+.|++||+++         ++                ......+.
T Consensus        89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~  150 (342)
T 1yfq_A           89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL----------------NSNNTKVK  150 (342)
T ss_dssp             SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES----------------CSSSSSSC
T ss_pred             CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC----------------eeeEEeeC
Confidence            7755 67788  999999999999 99999999999999999876         33                22223377


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~  381 (504)
                      ..+.+++|+|++  +++++.++.|++||+++ .........                                       
T Consensus       151 ~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~---------------------------------------  189 (342)
T 1yfq_A          151 NKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEE---------------------------------------  189 (342)
T ss_dssp             CCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEE---------------------------------------
T ss_pred             CceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeee---------------------------------------
Confidence            889999999887  88999999999999886 421111000                                       


Q ss_pred             CCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCC------CcceeecccCC---------CCceeEE
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASP------TPRIKAELTSS---------APACYAL  445 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~---------~~~v~~l  445 (504)
                                ..+...+.+++|+| +++++++++.||.|++|+++..      +....  +..|         ...|+++
T Consensus       190 ----------~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~  257 (342)
T 1yfq_A          190 ----------SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA--FRCHRLNLKDTNLAYPVNSI  257 (342)
T ss_dssp             ----------CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE--EECCCCCTTCCSSCCCEEEE
T ss_pred             ----------cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee--eecccccccccccceeEEEE
Confidence                      12345577999999 9999999999999999998765      33333  3333         3489999


Q ss_pred             EECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec-CCceEEEEEccCCCEEEEecCCCC
Q psy17188        446 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       446 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +|+|++++|++++.||.|++||+.+++++..+.+| ...|++++  |++++|++++.||+
T Consensus       258 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             EECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             EEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence            99999999999999999999999999999999998 99999999  99999999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-40  Score=307.53  Aligned_cols=317  Identities=15%  Similarity=0.102  Sum_probs=248.2

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCce
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPV  150 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~  150 (504)
                      ...|.+++|+|||+.++.+..|..+..   +...+.+  -+|...|.+++|+|+|      .++.+.+|+.+.   ...+
T Consensus        15 ~~~v~sv~~SpDG~~iASas~D~TV~d---~~~~~~l--~gh~~~v~~V~FsPdg------~~~~~~~~~~~~---~~~~   80 (588)
T 2j04_A           15 EDWKNNLTWARDGTLYLTTFPDISIGQ---PKYAKDI--NCNSKNLFHVKEFPLE------FENKLDFELAQQ---NGLL   80 (588)
T ss_dssp             SSSSCCEEECTTSCEEEECSSSEEEEE---ECCCSCC--SSBGGGTEEEEEECCC------CCCTTTTSCCCS---SCSS
T ss_pred             hccEEEEEECCCCCEEEEEcCCceeec---cccccee--cCCCccEEEEEECCCC------CcceEEEEeCCC---ceEe
Confidence            357999999999999999999888772   3333333  2899999999999998      455555555332   2211


Q ss_pred             eeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC-----ceEEEEECCCCCEEEEEeCCC
Q psy17188        151 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-----ACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       151 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      .    ..|...|.+++|||+|++||+++.||.|++||.+.    ....+. |..     .+.+++|||||++|++|+.||
T Consensus        81 ~----~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG  151 (588)
T 2j04_A           81 N----SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG  151 (588)
T ss_dssp             T----TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred             e----cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence            1    14578999999999999999999999999999543    334445 554     599999999999999999999


Q ss_pred             cEEEEECCCCe-------EEEee----cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188        226 NIAVWDLHNQT-------LVRQF----QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS  294 (504)
Q Consensus       226 ~i~iwd~~~~~-------~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~  294 (504)
                      +|++||+.++.       .+.++    .+|...|.+++|+|||  +++++.|+++++||+.+++...          .  
T Consensus       152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~----------~--  217 (588)
T 2j04_A          152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP----------V--  217 (588)
T ss_dssp             EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC----------C--
T ss_pred             EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc----------c--
Confidence            99999999875       35666    6788999999999999  8888999999999998775210          0  


Q ss_pred             ccee-cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE--CCCCCCceeeeccCCCe
Q psy17188        295 QLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       295 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~  371 (504)
                      .... ..|...|.+++|+  ++.|++++ ++.|++||+.+.+  ......+|...+..+++  +|++.  .++++..+|+
T Consensus       218 ~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~--~~~~~~gh~~~V~~va~~~s~d~~--~La~a~edG~  290 (588)
T 2j04_A          218 SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS--ISSLKTGSLENFHIIPLNHEKEST--ILLMSNKTSY  290 (588)
T ss_dssp             EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE--EEEEECSCCSCCCEEEETTCSSCE--EEEECSSCEE
T ss_pred             eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe--EEEEEcCCCceEEEEEeeeCCCCC--EEEEEcCCCC
Confidence            0111 2566889999999  68888887 6999999998763  21222268899999999  99987  7999999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                       ++|..+                     .++++||+..+++.  |+++++|+..... ..  .+.+ ...|.+++|+|||
T Consensus       291 -klw~~d---------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~--~~~~-~~~I~~va~SPdG  342 (588)
T 2j04_A          291 -KVLLED---------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FN--NYET-TLVIHGISLSPDG  342 (588)
T ss_dssp             -EEEESS---------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SS--SSCC-EEEEEEEEECTTS
T ss_pred             -EEEeec---------------------cEEECCCceEEEEc--CCEEEEEECCCCc-ee--eecc-ceEEEEEEECCCC
Confidence             999875                     25699999887775  9999999986543 11  3333 5669999999999


Q ss_pred             CEEEEeeC
Q psy17188        452 KVCFSCCS  459 (504)
Q Consensus       452 ~~l~s~~~  459 (504)
                      +.+|+++.
T Consensus       343 ~~lA~~~~  350 (588)
T 2j04_A          343 YSIAIVYD  350 (588)
T ss_dssp             SEEEEEEE
T ss_pred             CEEEEEEe
Confidence            99998864

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=3.8e-38  Score=301.43  Aligned_cols=287  Identities=15%  Similarity=0.230  Sum_probs=228.7

Q ss_pred             eeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEE
Q psy17188        196 KAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRS  271 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~  271 (504)
                      ......|...|++++|+| ++++|++|+.||.|+|||+.+++  ....+.+|.+.|++++|+| ++++|++++.||+|++
T Consensus       112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i  191 (435)
T 4e54_B          112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL  191 (435)
T ss_dssp             CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred             cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence            345567888999999999 56799999999999999998764  4455678999999999998 6889999999999999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  351 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~  351 (504)
                      ||++++....+             .........+.+++|+|++++|++|+.||.|++||++..   ....+..|...|.+
T Consensus       192 wd~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~  255 (435)
T 4e54_B          192 QDFKGNILRVF-------------ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTH  255 (435)
T ss_dssp             EETTSCEEEEE-------------ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEE
T ss_pred             eeccCCceeEE-------------eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEe
Confidence            99988765432             111233455788999999999999999999999998753   34566788899999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      ++|+|++.. ++++++.|+.|++||++.......+  .....|...|.+++|+|+|++|++++.||.|++||+.+++...
T Consensus       256 v~~~p~~~~-~~~s~s~d~~v~iwd~~~~~~~~~~--~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~  332 (435)
T 4e54_B          256 VALNPCCDW-FLATASVDQTVKIWDLRQVRGKASF--LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL  332 (435)
T ss_dssp             EEECTTCSS-EEEEEETTSBCCEEETTTCCSSSCC--SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred             eeecCCCce-EEEEecCcceeeEEecccccccceE--EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence            999999876 7889999999999999876543332  2234678899999999999999999999999999999876544


Q ss_pred             eecccCC----CCceeEEEECCCCCEEEEee------------CCCcEEEEEcCCcceEEEEe-ecCCceEEE-EEccCC
Q psy17188        432 KAELTSS----APACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQ-GHTDGASCI-DISADG  493 (504)
Q Consensus       432 ~~~~~~~----~~~v~~l~~s~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~-~~s~d~  493 (504)
                      ......+    ...+....|+|++.+++++.            .++.|++||..+++++..+. +|...|.++ +|+|||
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg  412 (435)
T 4e54_B          333 GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG  412 (435)
T ss_dssp             EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS
T ss_pred             EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC
Confidence            3322211    11233456777777766654            34579999999999988875 577888887 699999


Q ss_pred             CEEEEecC
Q psy17188        494 TKLWTGGL  501 (504)
Q Consensus       494 ~~l~s~s~  501 (504)
                      ++|++|+.
T Consensus       413 ~~lasg~d  420 (435)
T 4e54_B          413 DTLASAMG  420 (435)
T ss_dssp             SCEEEECS
T ss_pred             CEEEEEcC
Confidence            99999873

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=278.72  Aligned_cols=286  Identities=18%  Similarity=0.310  Sum_probs=239.6

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEe
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  240 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~  240 (504)
                      +.++|+||+++ +||+| .|++|+|||+.+++......+.+|...|++++|+|++++|++|+.|++|++||+++++.+..
T Consensus        27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~  104 (318)
T 4ggc_A           27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  104 (318)
T ss_dssp             TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence            46789999886 77776 58999999999887665666678888999999999999999999999999999999999999


Q ss_pred             ecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       241 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      +.+|...+.++.+  ++..+++++.++.+++|+.......              ......|...+..+.+++++++|+++
T Consensus       105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~s~  168 (318)
T 4ggc_A          105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHH--------------VATLSGHSQEVCGLRWAPDGRHLASG  168 (318)
T ss_dssp             EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE--------------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCcee--------------EEEEcCccCceEEEEEcCCCCEEEEE
Confidence            9999998887665  4679999999999999998876532              33345678889999999999999999


Q ss_pred             eCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCCCCCce-eeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        321 GEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPDSKSPF-FSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      +.|+.|++||+++++..  .......+...+..+.++|++...+ +++++.++.|++||.+....      .....+...
T Consensus       169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~------~~~~~~~~~  242 (318)
T 4ggc_A          169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------LSAVDAHSQ  242 (318)
T ss_dssp             ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE------EEEEECSSC
T ss_pred             ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc------cccccceee
Confidence            99999999999876532  3445566777899999999887643 35678899999999876432      222346677


Q ss_pred             eEEEEEcCCCCEEEEee--CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        398 IRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      +..+.|+|++..+++++  .|+.|++||+++++.+  ..+.+|...|++++|+||+++|++|+.||+|+|||+.+..
T Consensus       243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~--~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV--AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             eeeeeecccccceEEEEEcCCCEEEEEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            99999999999887654  7999999999987654  4567899999999999999999999999999999997653

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=290.53  Aligned_cols=280  Identities=18%  Similarity=0.289  Sum_probs=224.7

Q ss_pred             cCCCCceEEEEEccC---CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188        156 LQRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~  232 (504)
                      .+|.+.|++++|+|+   +++|++++.||.|++||+.+........+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus        36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~  115 (368)
T 3mmy_A           36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL  115 (368)
T ss_dssp             SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence            379999999999998   69999999999999999987444445778899999999999999999999999999999999


Q ss_pred             CCCeEEEeecCCCCCeEEEEE--ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        233 HNQTLVRQFQGHTDGASCIDI--SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       233 ~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      ++++.+.. ..|...|.+++|  ++++++|++++.|+.|++||+++++.                .........+.++.+
T Consensus       116 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----------------~~~~~~~~~~~~~~~  178 (368)
T 3mmy_A          116 SSNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP----------------MMVLQLPERCYCADV  178 (368)
T ss_dssp             TTTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC----------------SEEEECSSCEEEEEE
T ss_pred             CCCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE----------------EEEEecCCCceEEEe
Confidence            99988774 459999999999  88999999999999999999998762                222333445666666


Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188        311 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD  390 (504)
Q Consensus       311 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~  390 (504)
                      .  ...+++++.++.+.+|+++.............                                             
T Consensus       179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------------------------------------  211 (368)
T 3mmy_A          179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPL---------------------------------------------  211 (368)
T ss_dssp             E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSC---------------------------------------------
T ss_pred             c--CCeeEEEeCCCcEEEEEeccccchhhhccccc---------------------------------------------
Confidence            5  45788899999999999976532111111111                                             


Q ss_pred             cccCCCceEEEEEcCCCC----EEEEeeCCCcEEEeeCCCCCc-ceeecccCCCC------------ceeEEEECCCCCE
Q psy17188        391 CLQRDNYIRSVKLLPDGR----TLIVGGEASNLSIWDLASPTP-RIKAELTSSAP------------ACYALAISPDSKV  453 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~----~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~------------~v~~l~~s~~~~~  453 (504)
                          ...+.++++.++..    .+++++.||.|++||++.... .....+..|..            .|++++|+|++++
T Consensus       212 ----~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  287 (368)
T 3mmy_A          212 ----KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT  287 (368)
T ss_dssp             ----SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC
T ss_pred             ----cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE
Confidence                11122333333332    288888888899998886643 23333444443            6999999999999


Q ss_pred             EEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        454 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       454 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      |++++.||.|++||+.+++++..+.+|...|++++|+||+++|+++|.|+
T Consensus       288 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~  337 (368)
T 3mmy_A          288 LATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD  337 (368)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred             EEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence            99999999999999999999999999999999999999999999999986

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2e-37  Score=280.59  Aligned_cols=253  Identities=14%  Similarity=0.197  Sum_probs=208.8

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~  187 (504)
                      +|.+.|.+++|+|+|++|++++ |++|+|||++... ...+.  .+.+|.+.|.+++|++  ++++|++++.|++|++||
T Consensus         7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~--~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLID--TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCE--EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEE--EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            8999999999999999999998 9999999997532 12222  3348999999999986  489999999999999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccC-------
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISAD-------  256 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~-------  256 (504)
                      +.+++......+..|...|.+++|+|+  +.+|++++.|+.|++||++++.  ....+.+|...|.+++|+|+       
T Consensus        84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~  163 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  163 (297)
T ss_dssp             BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred             cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence            987755556667889999999999997  8899999999999999998763  24567789999999999996       


Q ss_pred             ------CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEE
Q psy17188        257 ------GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLS  327 (504)
Q Consensus       257 ------~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~  327 (504)
                            +++|++++.|++|++||+++++....           .......|...|.+++|+|++   ++|++++.|++|+
T Consensus       164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-----------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~  232 (297)
T 2pm7_B          164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-----------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI  232 (297)
T ss_dssp             ------CCEEEEEETTSCEEEEEEETTTTEEE-----------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred             CCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-----------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence                  56999999999999999987641100           022345688899999999984   8999999999999


Q ss_pred             EEeCCCCCccce-eee--ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        328 IWDLASPTPRIK-AEL--TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       328 v~d~~~~~~~~~-~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      +||++....... ..+  ..+...+.+++|+|+++  ++++++.|+.|++|+...
T Consensus       233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC--CEEEEETTSCEEEEEECT
T ss_pred             EEEeCCCCCccceeeeecccCCCcEEEEEECCCCC--EEEEEcCCCcEEEEEECC
Confidence            999987532211 122  45677899999999998  799999999999999764

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2.5e-38  Score=294.63  Aligned_cols=278  Identities=14%  Similarity=0.190  Sum_probs=213.1

Q ss_pred             CCceEEEEEccCCCEEEEecCCC-------cEEEEeCCCCCccc--------eeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEAS-------NLSIWDLASPTPRI--------KAELTSSAPACYALAISPDSKVCFSCC-  222 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg-------~i~iw~~~~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~-  222 (504)
                      ..+|++++|+||+++|++|+.+.       .|++|++.......        ...+..|...+.+++++  ++.++++. 
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~   91 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN   91 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence            45799999999999999987533       59999987654321        23456778888888774  44666653 


Q ss_pred             ----------CCCcEEEEECCCCeE----EEee-----cCCCCCeEEEEEccCCCEEEE--EcCCCeEEEEECCCCceEE
Q psy17188        223 ----------SDGNIAVWDLHNQTL----VRQF-----QGHTDGASCIDISADGTKLWT--GGLDNTVRSWDLREGCVKV  281 (504)
Q Consensus       223 ----------~dg~i~iwd~~~~~~----~~~~-----~~h~~~v~~~~~~~~~~~l~s--~~~dg~i~~wd~~~~~~~~  281 (504)
                                .|+.+++|++.....    +...     ..+...+.+++|+|||+++++  ++.|++|++||+++++.  
T Consensus        92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~--  169 (365)
T 4h5i_A           92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE--  169 (365)
T ss_dssp             CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--
T ss_pred             CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--
Confidence                      477899999865421    1111     234556899999999998764  45789999999999874  


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP  361 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  361 (504)
                                    .....+...|.+++|+|+|+++++++.+ .+.+|+..++.......                    
T Consensus       170 --------------~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~--------------------  214 (365)
T 4h5i_A          170 --------------KFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT--------------------  214 (365)
T ss_dssp             --------------EEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC--------------------
T ss_pred             --------------EEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee--------------------
Confidence                          2334567789999999999999999755 56666655542111100                    


Q ss_pred             eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC----cEEEeeCCCCCcc--eeecc
Q psy17188        362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS----NLSIWDLASPTPR--IKAEL  435 (504)
Q Consensus       362 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg----~i~iwd~~~~~~~--~~~~~  435 (504)
                                                   ...|...|.+++|+|+++++++++.|+    .+++|++......  ....+
T Consensus       215 -----------------------------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~  265 (365)
T 4h5i_A          215 -----------------------------DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV  265 (365)
T ss_dssp             -----------------------------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred             -----------------------------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence                                         012455677999999999999988877    5788887755432  23456


Q ss_pred             cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE-eecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..|...|++++|+|||++||+|+.|++|+|||+++++++..+ .+|...|++++|+|||++|+|||.|+|
T Consensus       266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t  335 (365)
T 4h5i_A          266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT  335 (365)
T ss_dssp             ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred             cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence            778889999999999999999999999999999999999885 689999999999999999999999986

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.9e-37  Score=292.24  Aligned_cols=291  Identities=23%  Similarity=0.318  Sum_probs=231.4

Q ss_pred             cCCCc--EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        111 SHGEV--VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~--V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +|...  +.+++|++ +.+++++.|+.|++||+.++...   .. ....|...|.+++|+|++++|++++.||.|++||+
T Consensus        89 ~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~---~~-~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~  163 (401)
T 4aez_A           89 GIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVS---AL-AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV  163 (401)
T ss_dssp             TCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEE---EE-EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEe---Ee-eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence            55544  55677775 44565556999999999875322   22 22248899999999999999999999999999999


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                      .+++  ....+..|...|.+++|  ++++|++++.|+.|++||++ ....+..+.+|...|.+++|+|++++|++++.|+
T Consensus       164 ~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~  239 (401)
T 4aez_A          164 ESQT--KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN  239 (401)
T ss_dssp             TTCC--EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cCCe--EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence            8765  35667799999999999  55699999999999999999 5677888999999999999999999999999999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC-EEEEEe--CCCcEEEEeCCCCCccceeeecc
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGG--EASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .|++||+++++.               ......+...|.+++|+|++. ++++++  .|+.|++||+.+++...  .+ .
T Consensus       240 ~v~iwd~~~~~~---------------~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~--~~-~  301 (401)
T 4aez_A          240 VVQIWDARSSIP---------------KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN--TV-D  301 (401)
T ss_dssp             CEEEEETTCSSE---------------EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE--EE-E
T ss_pred             eEEEccCCCCCc---------------cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE--EE-e
Confidence            999999998764               233446788899999999764 555554  79999999999875433  33 2


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      +...+.+++|+|+++.++.+++..++.|++||+.....   ........|...|.+++|+|++++|++++.||.|++|++
T Consensus       302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~  378 (401)
T 4aez_A          302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL---TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV  378 (401)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE---EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred             CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc---eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            45689999999999943333377899999999976422   222234467889999999999999999999999999999


Q ss_pred             CCCCcce
Q psy17188        425 ASPTPRI  431 (504)
Q Consensus       425 ~~~~~~~  431 (504)
                      .+++...
T Consensus       379 ~~~~~~~  385 (401)
T 4aez_A          379 YDGDHVK  385 (401)
T ss_dssp             CC-----
T ss_pred             CCCcccc
Confidence            9876543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.9e-38  Score=298.30  Aligned_cols=323  Identities=11%  Similarity=0.061  Sum_probs=224.3

Q ss_pred             CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-
Q psy17188        158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-  236 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-  236 (504)
                      +.+.|++++|+|++++|++++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.|+.|++||+.+++ 
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~   89 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT   89 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence            5678999999999999999999999999999876435567788999999999999999999999999999999999887 


Q ss_pred             --EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc-cCCceEEEEEcCC
Q psy17188        237 --LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ-RDNYIRSVKLLPD  313 (504)
Q Consensus       237 --~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~  313 (504)
                        ....+.+|...|.+++|+|++++|++++.|+.|++||+++++...            ....... |...|.+++|+|+
T Consensus        90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~  157 (377)
T 3dwl_C           90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW------------VSKHLKRPLRSTILSLDWHPN  157 (377)
T ss_dssp             CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC------------CCEEECSSCCSCEEEEEECTT
T ss_pred             eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce------------eeeEeecccCCCeEEEEEcCC
Confidence              677788899999999999999999999999999999998875100            0112223 7889999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCC----------------ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        314 GRTLIVGGEASNLSIWDLASPT----------------PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      +++|++++.|+.|++||++...                ......+ .|...+.+++|+|+++  ++++++.|+.|++||+
T Consensus       158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~--~l~~~~~d~~i~iwd~  234 (377)
T 3dwl_C          158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN--ALAYAGHDSSVTIAYP  234 (377)
T ss_dssp             SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS--CEEEEETTTEEC-CEE
T ss_pred             CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC--EEEEEeCCCcEEEEEC
Confidence            9999999999999999986332                1223333 7888999999999998  7999999999999999


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---------------Cce
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---------------PAC  442 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------~~v  442 (504)
                      ........ .......|...|.+++|+|++++|++++.++.+ +|+...........+....               ...
T Consensus       235 ~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (377)
T 3dwl_C          235 SAPEQPPR-ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE  312 (377)
T ss_dssp             CSTTSCEE-ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred             CCCCCcce-eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence            87654110 022234578889999999999999998766655 7766533222111111110               112


Q ss_pred             eEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC-C---EEEEecCCCC
Q psy17188        443 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG-T---KLWTGGLDNT  504 (504)
Q Consensus       443 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~-~---~l~s~s~Dgt  504 (504)
                      ..+.|++....+......|...       ........|.+.|+++.+.++. .   .|+|+|.||+
T Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~  371 (377)
T 3dwl_C          313 GPVSFTALRSTFRNMDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGR  371 (377)
T ss_dssp             -------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSE
T ss_pred             cccccccccccccchhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCc
Confidence            3333333322222222222111       1122234699999999976644 3   6999999985

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-36  Score=275.32  Aligned_cols=279  Identities=14%  Similarity=0.244  Sum_probs=238.0

Q ss_pred             cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      .....+.+|...|.+++| +++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus         9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~   87 (313)
T 3odt_A            9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP   87 (313)
T ss_dssp             EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence            456778899999999999 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      +.....            .........|...+.+++|  +++++++++.|+.|++||    .......+..|...+.++.
T Consensus        88 ~~~~~~------------~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~  149 (313)
T 3odt_A           88 LFATSG------------EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAK  149 (313)
T ss_dssp             TTCCTT------------SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE----TTEEEEEEECCSSCEEEEE
T ss_pred             eeecCC------------CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc----CCcEEEecccCCCceeEEE
Confidence            876531            0012334567888999999  577999999999999999    2255666778888999999


Q ss_pred             ECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        354 ISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       354 ~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      +.| +++  .+++++.++.+++||...     ... .....+...+.+++|+|++. +++++.||.|++||+++++..  
T Consensus       150 ~~~~~~~--~l~~~~~d~~i~i~d~~~-----~~~-~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~--  218 (313)
T 3odt_A          150 VVSFSEN--KFLTASADKTIKLWQNDK-----VIK-TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL--  218 (313)
T ss_dssp             EEETTTT--EEEEEETTSCEEEEETTE-----EEE-EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE--
T ss_pred             EccCCCC--EEEEEECCCCEEEEecCc-----eEE-EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh--
Confidence            998 666  789999999999999432     111 11123778899999999998 999999999999999977544  


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+..|...|++++|+|++ .|++++.||.|++||+.+++++..+..|...|++++|+|+++ +++++.||+
T Consensus       219 ~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~  288 (313)
T 3odt_A          219 RTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL  288 (313)
T ss_dssp             EEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred             hhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence            4456788899999999999 588999999999999999999999999999999999999998 667888874

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.6e-36  Score=288.87  Aligned_cols=288  Identities=20%  Similarity=0.312  Sum_probs=234.9

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  194 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  194 (504)
                      ....|+||++ ++||+|.|++|+|||..+++   ....+...+|...|++++|+|+|++|++|+.|+.|+|||+.+++  
T Consensus       107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~---~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--  180 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGD---ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--  180 (420)
T ss_dssp             TCBCEEECTT-SEEEEEETTEEEEEETTTCC---EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--
T ss_pred             cceeEEECCC-CEEEEEeCCEEEEEECCCCC---EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc--
Confidence            4577999975 58888889999999998863   33445556788999999999999999999999999999998765  


Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....+.+|...+.+++++  +.+|++++.|+.+++||... ...+..+.+|...+..+.|+|+++++++++.|+.+++|+
T Consensus       181 ~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~  258 (420)
T 4gga_A          181 RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  258 (420)
T ss_dssp             EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence            466788999999988874  56999999999999999886 456678899999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEE--EeCCCcEEEEeCCCCCccceeeeccCCCcee
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIV--GGEASNLSIWDLASPTPRIKAELTSSAPACY  350 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~  350 (504)
                      ..+++..           .........+...|.+++|+|.+ ..+++  |+.|+.|++||+.+++.  ...+.. ...+.
T Consensus       259 ~~~~~~~-----------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~~-~~~v~  324 (420)
T 4gga_A          259 SAPGEGG-----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVDA-HSQVC  324 (420)
T ss_dssp             SSCCSSC-----------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE--EEEEEC-SSCEE
T ss_pred             ecccccc-----------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc--ceeecc-cccee
Confidence            9877521           11123445678889999999965 45554  35799999999998743  333333 34789


Q ss_pred             eEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc
Q psy17188        351 ALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  429 (504)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~  429 (504)
                      ++.|+++++.++.+++..|+.|++||+.+....     .....|...|.+++|+|||++|++|+.|++|++||+....+
T Consensus       325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v-----~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~  398 (420)
T 4gga_A          325 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-----AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP  398 (420)
T ss_dssp             EEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred             eeeecCCCCeEEEEEecCCCEEEEEECCCCcEE-----EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence            999999999755556678999999999865332     22346889999999999999999999999999999976543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.4e-37  Score=282.49  Aligned_cols=251  Identities=16%  Similarity=0.235  Sum_probs=205.7

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~  187 (504)
                      +|.+.|++++|+|++++|++++ |++|+|||+.++.   ......+.+|.+.|.+++|++  ++++|++++.|++|++||
T Consensus        11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~---~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A           11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG---QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE---EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC---cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            8999999999999999999998 9999999997642   112223448999999999986  489999999999999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe---EEEeecCCCCCeEEEEEccC------
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISAD------  256 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~------  256 (504)
                      +++++......+.+|...|.+++|+|+  +.+|++++.|+.|++||++++.   ....+.+|...|.+++|+|+      
T Consensus        88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~  167 (316)
T 3bg1_A           88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL  167 (316)
T ss_dssp             CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred             CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence            987655556677889999999999997  7899999999999999998763   24566789999999999997      


Q ss_pred             -----------CCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCC----CEEEEE
Q psy17188        257 -----------GTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG----RTLIVG  320 (504)
Q Consensus       257 -----------~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~  320 (504)
                                 +++|++++.|++|++||++.+. ...             ......|...|.+++|+|++    ++|+++
T Consensus       168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~-------------~~~l~~h~~~V~~v~~sp~~~~~~~~las~  234 (316)
T 3bg1_A          168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE-------------EQKLEAHSDWVRDVAWAPSIGLPTSTIASC  234 (316)
T ss_dssp             ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE-------------EECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred             cccccccCccccceEEEecCCCeEEEEEeCCCCccce-------------eeecccCCCceEEEEecCCCCCCCceEEEE
Confidence                       4689999999999999997542 111             22345688899999999986    899999


Q ss_pred             eCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        321 GEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      +.|++|++|+++....  .....+..+...+.+++|+|+++  ++++++.|+.|++|+...
T Consensus       235 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~--~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          235 SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN--ILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC--CEEEEESSSCEEEEEECT
T ss_pred             cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC--EEEEEcCCCeEEEEEECC
Confidence            9999999999876321  12233456778999999999998  799999999999999753

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.6e-37  Score=282.35  Aligned_cols=256  Identities=15%  Similarity=0.211  Sum_probs=208.6

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEECC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+|.+.|++++|+|++++||+|+.|++|+|||+.+++......+.+|...|.+++|++  ++++|++++.|++|++||++
T Consensus        10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~   89 (316)
T 3bg1_A           10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE   89 (316)
T ss_dssp             ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred             ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence            3799999999999999999999999999999998765445677889999999999986  48899999999999999999


Q ss_pred             CC--eEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        234 NQ--TLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       234 ~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      ++  +....+.+|...|.+++|+|+  +.+|++++.|++|++||++.+. ...             ......|...+.++
T Consensus        90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~-------------~~~~~~h~~~v~~~  156 (316)
T 3bg1_A           90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV-------------KKINNAHTIGCNAV  156 (316)
T ss_dssp             SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE-------------CCBTTSSSSCBCCC
T ss_pred             CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce-------------eeeeccccCCcceE
Confidence            87  466778899999999999997  7899999999999999998753 110             11223566778899


Q ss_pred             EEcCC-----------------CCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCC--CceeeeccC
Q psy17188        309 KLLPD-----------------GRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSK--SPFFSSHHY  368 (504)
Q Consensus       309 ~~~~~-----------------~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~  368 (504)
                      +|+|+                 +++|++++.|+.|++||++... ......+..|...|.+++|+|++.  ..++++++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~  236 (316)
T 3bg1_A          157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ  236 (316)
T ss_dssp             EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred             EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence            99987                 4789999999999999997542 234566788999999999999872  138999999


Q ss_pred             CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      |+.|++|+++........ ......+...|.+++|+|++++|++++.|+.|++|+..
T Consensus       237 D~~v~iw~~~~~~~~~~~-~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          237 DGRVFIWTCDDASSNTWS-PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             TCEEEEEECSSTTCCCCB-CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             CCeEEEEEccCccccchh-hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            999999998763211110 11123467889999999999999999999999999975

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.7e-36  Score=291.74  Aligned_cols=305  Identities=14%  Similarity=0.238  Sum_probs=226.2

Q ss_pred             ecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCC-----Cce-eeeeecCCC------------CceEEEEEccC
Q psy17188        110 LSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSK-----TPV-SQLDCLQRD------------NYIRSVKLLPD  170 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~-----~~~-~~~~~~~~~------------~~v~~~~~s~~  170 (504)
                      +.|.+.|++++|+|++++|++++ ||.|+|||+.++...     ... ......+|.            ..|++++|+|+
T Consensus        25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~  104 (447)
T 3dw8_B           25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ  104 (447)
T ss_dssp             CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred             ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence            46789999999999999999998 999999999875421     111 122333677            88999999999


Q ss_pred             C--CEEEEecCCCcEEEEeCCCCCccc--------------------------------------eeeeecCcCceEEEE
Q psy17188        171 G--RTLIVGGEASNLSIWDLASPTPRI--------------------------------------KAELTSSAPACYALA  210 (504)
Q Consensus       171 ~--~~l~~~~~dg~i~iw~~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~  210 (504)
                      +  .+|++++.|+.|++||+.+.+...                                      .....+|...|.+++
T Consensus       105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  184 (447)
T 3dw8_B          105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS  184 (447)
T ss_dssp             CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred             CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence            8  799999999999999987532210                                      011357999999999


Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCC-CeEEE-------eecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCce--
Q psy17188        211 ISPDSKVCFSCCSDGNIAVWDLHN-QTLVR-------QFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCV--  279 (504)
Q Consensus       211 ~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~--  279 (504)
                      |+|++++|+++ .|+.|++||+++ ++.+.       .+.+|...|.+++|+|++ ++|++++.||.|++||+++++.  
T Consensus       185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  263 (447)
T 3dw8_B          185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD  263 (447)
T ss_dssp             ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred             EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence            99999999998 799999999994 44444       366899999999999998 8999999999999999998763  


Q ss_pred             ---EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCccceeeeccCCCc-------
Q psy17188        280 ---KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPA-------  348 (504)
Q Consensus       280 ---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~-------  348 (504)
                         ..+......    ........+...|.+++|+|++++|++++. +.|++||++. .+  ....+..|...       
T Consensus       264 ~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~--~~~~~~~~~~~~~~l~~~  336 (447)
T 3dw8_B          264 RHSKLFEEPEDP----SNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR--PVETYQVHEYLRSKLCSL  336 (447)
T ss_dssp             TTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS--CSCCEESCGGGTTTHHHH
T ss_pred             ceeeEeccCCCc----cccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc--ccceeecccccccccccc
Confidence               221111000    000011123348999999999999999999 9999999986 43  33334444321       


Q ss_pred             --------eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc---------------------------ccccccc
Q psy17188        349 --------CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV---------------------------SQLDCLQ  393 (504)
Q Consensus       349 --------i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~---------------------------~~~~~~~  393 (504)
                              +..++|+|+++  ++++++.|+.|++||+.........                           .......
T Consensus       337 ~~~~~i~~~~~~~~s~~~~--~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (447)
T 3dw8_B          337 YENDCIFDKFECCWNGSDS--VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLD  414 (447)
T ss_dssp             HHTSGGGCCCCEEECTTSS--EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCC
T ss_pred             ccccccccceEEEECCCCC--EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccc
Confidence                    23499999998  7899999999999999865321100                           0011223


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      ....|..++|+|++.+||+++.++ +++|..+
T Consensus       415 ~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          415 FNKKILHTAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             TTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred             cCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence            456788999999999999998776 8888643

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-37  Score=298.53  Aligned_cols=347  Identities=13%  Similarity=0.177  Sum_probs=254.3

Q ss_pred             CCcceEEEECC-CCCcccCCCCCCcccCCCCCc---c--ccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCC-
Q psy17188         71 GKPAYSYHVTT-DGQMQPVPFPPDALIGPGIPR---H--ARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDIS-  142 (504)
Q Consensus        71 ~~~v~~~~~s~-~g~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~-  142 (504)
                      .+.|.+++|+| +++.++.+..++.+.+|+...   .  .+....++|...|.+++|+|++++|++++ |+.|++||++ 
T Consensus        63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~  142 (437)
T 3gre_A           63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH  142 (437)
T ss_dssp             TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred             CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence            57899999999 999999999999999888654   2  22345558999999999999999999988 9999999985 


Q ss_pred             --CCCCCC-----ceeeeeecC--CCCceEEEE--EccCCCEEEEecCCCcEEEEeCCCCCccceeeeec--CcCceEEE
Q psy17188        143 --QPGSKT-----PVSQLDCLQ--RDNYIRSVK--LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS--SAPACYAL  209 (504)
Q Consensus       143 --~~~~~~-----~~~~~~~~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~v~~~  209 (504)
                        .+....     .+..+....  +...+.++.  +++++++|++++.|+.|++||+.+++.  ...+..  |...|+++
T Consensus       143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~  220 (437)
T 3gre_A          143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER--LQIIENSPRHGAVSSI  220 (437)
T ss_dssp             EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE--EEEEECCGGGCCEEEE
T ss_pred             ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee--eEEEccCCCCCceEEE
Confidence              322111     112222222  667788888  668999999999999999999987664  445555  88999999


Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEcc----CCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISA----DGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      +|+|++++|++++.||.|++||+++++.+..+. .|...|.+++|+|    ++.+|++++.||.|++||+++++.     
T Consensus       221 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-----  295 (437)
T 3gre_A          221 CIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC-----  295 (437)
T ss_dssp             EECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE-----
T ss_pred             EECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE-----
Confidence            999999999999999999999999999999886 6888999997665    577999999999999999998875     


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS  364 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  364 (504)
                                ......+...+..+.|+|+++.+    .+..              ..-..|...|.+++|+ +++  +++
T Consensus       296 ----------~~~~~~~~~~~~~~~~~~~~~~l----~~~~--------------~~~~~~~~~v~~l~~~-~~~--~l~  344 (437)
T 3gre_A          296 ----------QYAFINSDEQPSMEHFLPIEKGL----EELN--------------FCGIRSLNALSTISVS-NDK--ILL  344 (437)
T ss_dssp             ----------EEEEESSSSCCCGGGGSCBCSSG----GGCC--------------CCCCCSGGGGCCEEEE-TTE--EEE
T ss_pred             ----------EEEEEcCCCCCccceeccccccc----ccce--------------ecccccCCceEEEEEC-Cce--EEE
Confidence                      22334455566666677765544    0000              1112366789999999 554  789


Q ss_pred             eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeE
Q psy17188        365 SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  444 (504)
Q Consensus       365 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  444 (504)
                      +++.|+.|++||+..+.....+...  ......+....++++..+++..        |+......  ......|...|++
T Consensus       345 s~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~~~h~~~I~~  412 (437)
T 3gre_A          345 TDEATSSIVMFSLNELSSSKAVISP--SRFSDVFIPTQVTANLTMLLRK--------MKRTSTHS--VDDSLYHHDIINS  412 (437)
T ss_dssp             EEGGGTEEEEEETTCGGGCEEEECC----CCCEEEEEEEETTEEEEEEE--------CC---------------CCCEEE
T ss_pred             ecCCCCeEEEEECCCcccceEEecc--cccCceEEEEEeecceEEEEEe--------cccccccc--cCcccccccceee
Confidence            9999999999999875433322211  1123445566677666555544        22222221  2334568889999


Q ss_pred             EEECCC--CCEEEEeeCCCcEEEEE
Q psy17188        445 LAISPD--SKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       445 l~~s~~--~~~l~s~~~dg~i~iwd  467 (504)
                      ++|+++  +.+|++|+.||.|+||+
T Consensus       413 i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          413 ISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             EEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             EeeeccCCceEEEEEcCCceEEEeC
Confidence            999998  78999999999999995

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=6e-36  Score=274.26  Aligned_cols=285  Identities=20%  Similarity=0.295  Sum_probs=232.7

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  195 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  195 (504)
                      ..+|+||+++ +||+|.|++|+|||+++++   .+..+...+|...|++++|+|++++|++|+.|++|++||+++++  .
T Consensus        28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~---~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~  101 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVALDNSVYLWSASSGD---ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--R  101 (318)
T ss_dssp             CBCEEECTTS-EEEEEETTEEEEEETTTCC---EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--E
T ss_pred             ceEEEECCCC-EEEEEeCCEEEEEECCCCC---EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce--e
Confidence            4679999886 8888889999999998863   34455566889999999999999999999999999999999765  3


Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ...+.+|...+.++.+  ++..+++++.++.+++|+.... ..+..+.+|...+..+.+.+++++|++++.|+.|++||+
T Consensus       102 ~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~  179 (318)
T 4ggc_A          102 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS  179 (318)
T ss_dssp             EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred             EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence            6677889888877665  5669999999999999998865 566778899999999999999999999999999999999


Q ss_pred             CCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE---EEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188        275 REGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL---IVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  351 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~  351 (504)
                      ++++..           .........+...+.++.++|++..+   ++++.++.|++||......   .....+...+..
T Consensus       180 ~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---~~~~~~~~~v~~  245 (318)
T 4ggc_A          180 APGEGG-----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAVDAHSQVCS  245 (318)
T ss_dssp             SCBTTB-----------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---EEEEECSSCEEE
T ss_pred             CCCccc-----------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---cccccceeeeee
Confidence            876521           11133344567789999999976533   3556789999999887643   233445568999


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      +.++++++..++++++.|+.|++||+++.....     ....|...|++++|+|+|++|++++.||+|+|||+.+.
T Consensus       246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~-----~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA-----ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             EEEETTTTEEEEEECTTTCCEEEEETTTCCEEE-----EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             eeecccccceEEEEEcCCCEEEEEECCCCcEEE-----EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            999999997666677789999999998754322     23468899999999999999999999999999998754

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=291.94  Aligned_cols=294  Identities=12%  Similarity=0.192  Sum_probs=225.5

Q ss_pred             cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEeecCCC------------CCeEEEEEccCC
Q psy17188        201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----------LVRQFQGHT------------DGASCIDISADG  257 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~  257 (504)
                      .+...|++++|+|++++|++|+.||.|++||+.+++           ....+.+|.            ..|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            457789999999999999999999999999999877           578889998            889999999998


Q ss_pred             --CEEEEEcCCCeEEEEECCCCceEEEeecCCCCC---------C--Ccc--------------cceecccCCceEEEEE
Q psy17188        258 --TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK---------T--PVS--------------QLDCLQRDNYIRSVKL  310 (504)
Q Consensus       258 --~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~---------~--~~~--------------~~~~~~~~~~v~~~~~  310 (504)
                        .+|++++.|++|++||+.++.............         .  ...              ......|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              799999999999999998755321111100000         0  000              0112468889999999


Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCCCcccee------eeccCCCceeeEEECCCC-CCceeeeccCCCeEEEEecCCCCCC
Q psy17188        311 LPDGRTLIVGGEASNLSIWDLASPTPRIKA------ELTSSAPACYALAISPDS-KSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       311 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      +|++++|+++ .|+.|++||++........      .+..|...+.+++|+|++ .  ++++++.|+.|++||++.....
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~l~s~~~dg~i~iwd~~~~~~~  262 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN--TFVYSSSKGTIRLCDMRASALC  262 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT--EEEEEETTSCEEEEETTTCSSS
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc--EEEEEeCCCeEEEEECcCCccc
Confidence            9999999998 8999999999843222111      356788899999999998 5  8999999999999999876531


Q ss_pred             C-cccccccccCC------------CceEEEEEcCCCCEEEEeeCCCcEEEeeCCC-CCcceeecccCCCCc--------
Q psy17188        384 T-PVSQLDCLQRD------------NYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKAELTSSAPA--------  441 (504)
Q Consensus       384 ~-~~~~~~~~~~~------------~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~--------  441 (504)
                      . ....+  ..+.            ..|.+++|+|++++|++++. +.|++||+++ ++.....  ..|...        
T Consensus       263 ~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~--~~~~~~~~~l~~~~  337 (447)
T 3dw8_B          263 DRHSKLF--EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY--QVHEYLRSKLCSLY  337 (447)
T ss_dssp             CTTCEEE--CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE--ESCGGGTTTHHHHH
T ss_pred             cceeeEe--ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee--eccccccccccccc
Confidence            1 11111  1233            38999999999999999998 9999999986 5444333  333221        


Q ss_pred             -------eeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee---------------------------------cC
Q psy17188        442 -------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---------------------------------HT  481 (504)
Q Consensus       442 -------v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------h~  481 (504)
                             +..++|+|++++|++++.||.|++||+.+++.+. +..                                 +.
T Consensus       338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (447)
T 3dw8_B          338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFN  416 (447)
T ss_dssp             HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTT
T ss_pred             cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccC
Confidence                   2348999999999999999999999999988753 332                                 23


Q ss_pred             CceEEEEEccCCCEEEEecCCC
Q psy17188        482 DGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       482 ~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ..|..++|+|++++|++++.|+
T Consensus       417 ~~i~~~~~~p~~~~la~~~~~~  438 (447)
T 3dw8_B          417 KKILHTAWHPKENIIAVATTNN  438 (447)
T ss_dssp             SCCCEEEECSSSSEEEEECSSC
T ss_pred             CceeEEEECCCCCEEEEEecce
Confidence            5688999999999999999875

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.9e-36  Score=280.66  Aligned_cols=291  Identities=14%  Similarity=0.160  Sum_probs=235.8

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC-EEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~  188 (504)
                      +|.+.|++++|+|++++|++++ |+.|++|++.++.......  ....|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~   86 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL   86 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence            7999999999999999999888 9999999998754222222  3337899999999999999 9999999999999999


Q ss_pred             -CCCCccceeeeec--CcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccC
Q psy17188        189 -ASPTPRIKAELTS--SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       189 -~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                       .+++   ...+..  |...|.+++|+| +++|++++.|+.|++||+++         ++.+..+. |...|.+++|+|+
T Consensus        87 ~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~  161 (342)
T 1yfq_A           87 IGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS  161 (342)
T ss_dssp             SSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred             ccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence             7664   356677  999999999999 99999999999999999988         77777777 9999999999988


Q ss_pred             CCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC
Q psy17188        257 GTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      +  +++++.|+.|++||+++ +....             ......+...+.+++|+| +++++++++.||.+++|+++..
T Consensus       162 ~--l~~~~~d~~i~i~d~~~~~~~~~-------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~  226 (342)
T 1yfq_A          162 R--LIVGMNNSQVQWFRLPLCEDDNG-------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ  226 (342)
T ss_dssp             E--EEEEESTTEEEEEESSCCTTCCC-------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred             c--EEEEeCCCeEEEEECCccccccc-------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence            7  99999999999999987 54210             223345677899999999 9999999999999999998765


Q ss_pred             --C--ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE
Q psy17188        335 --T--PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  410 (504)
Q Consensus       335 --~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l  410 (504)
                        .  ......+..|...                                        .....+...|.+++|+|++++|
T Consensus       227 ~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~i~~~~~s~~~~~l  266 (342)
T 1yfq_A          227 GDDYNSSKRFAFRCHRLN----------------------------------------LKDTNLAYPVNSIEFSPRHKFL  266 (342)
T ss_dssp             CCSTTCTTCEEEECCCCC----------------------------------------TTCCSSCCCEEEEEECTTTCCE
T ss_pred             Ccccccccceeeeccccc----------------------------------------ccccccceeEEEEEEcCCCCEE
Confidence              1  0111111111100                                        0011356679999999999999


Q ss_pred             EEeeCCCcEEEeeCCCCCcceeecccCC-CCceeEEEECCCCCEEEEeeCCCc-EEEEE
Q psy17188        411 IVGGEASNLSIWDLASPTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGN-IAVWD  467 (504)
Q Consensus       411 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~~~~~l~s~~~dg~-i~iwd  467 (504)
                      ++++.||.|++||+.+++.  ...+..| ...|++++  |++++|++++.||. .+.|.
T Consensus       267 ~~~~~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          267 YTAGSDGIISCWNLQTRKK--IKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             EEEETTSCEEEEETTTTEE--EEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             EEecCCceEEEEcCccHhH--hhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence            9999999999999997754  4446666 88999999  99999999999998 55554

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-36  Score=286.35  Aligned_cols=256  Identities=16%  Similarity=0.284  Sum_probs=223.1

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +|.+.|++++|+|++++|++++.|+.|++||+..........+.+|...|++++|+++  +++|++++.||.|++||+.+
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~   88 (379)
T 3jrp_A            9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN   88 (379)
T ss_dssp             ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred             CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence            7999999999999999999999999999999986665667778899999999999987  89999999999999999999


Q ss_pred             Ce--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        235 QT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       235 ~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      ++  .+..+..|...|.+++|+|+  +.+|++++.|+.|++||++++...             .......+...|.+++|
T Consensus        89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-------------~~~~~~~~~~~v~~~~~  155 (379)
T 3jrp_A           89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSASW  155 (379)
T ss_dssp             TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC-------------CEEEEECCTTCEEEEEE
T ss_pred             CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce-------------eeEEecCCCCceEEEEE
Confidence            87  77888889999999999998  999999999999999999887421             13344567888999999


Q ss_pred             cC-------------CCCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCC---CCCceeeeccCCCeE
Q psy17188        311 LP-------------DGRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPD---SKSPFFSSHHYKSCV  372 (504)
Q Consensus       311 ~~-------------~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~i  372 (504)
                      +|             ++++|++++.|+.|++||+++....  ....+..|...+.+++|+|+   +.  ++++++.|+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~dg~i  233 (379)
T 3jrp_A          156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YLASVSQDRTC  233 (379)
T ss_dssp             CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEETTSCE
T ss_pred             cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC--eEEEEeCCCEE
Confidence            99             6999999999999999999876533  44567788899999999999   56  89999999999


Q ss_pred             EEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        373 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      ++||++...............+...|.+++|+|++++|++++.||.|++|++...
T Consensus       234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            9999987654444444444557889999999999999999999999999999754

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=5.4e-36  Score=278.26  Aligned_cols=313  Identities=11%  Similarity=0.148  Sum_probs=229.3

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeecCcCceEEEEECC--CCCEEEEEeCCCcEEEEE
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd  231 (504)
                      .+|.+.|++++|+|++++|++++.||.|++||+.++..  .....+.+|...|.+++|+|  ++++|++++.|+.|++||
T Consensus         8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A            8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE   87 (351)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence            38999999999999999999999999999999986543  34566788999999999999  689999999999999999


Q ss_pred             CCCC---------eEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceE-EEeecCCCCCCCcccceec
Q psy17188        232 LHNQ---------TLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVK-VWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       232 ~~~~---------~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~  299 (504)
                      ++++         +.+..+..|...|.+++|+|+  +++|++++.||.|++||+++++.. .+.....   .........
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~  164 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE---MKVLSIPPA  164 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE---EESCSCCCS
T ss_pred             cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc---ccccccccC
Confidence            9987         668888899999999999999  999999999999999999877521 0000000   000011223


Q ss_pred             ccCCceEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC--ceeeeccCCCeEEE
Q psy17188        300 QRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS--PFFSSHHYKSCVKV  374 (504)
Q Consensus       300 ~~~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~i~i  374 (504)
                      .+...+.+++|+|+   +..+++++.++.+.+|+...........+..|...|.+++|+|++..  .++++++.|+.|++
T Consensus       165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i  244 (351)
T 3f3f_A          165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI  244 (351)
T ss_dssp             SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred             CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence            56778999999997   89999999999998888887766667778889999999999999832  38999999999999


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee----CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      ||++.........     ...........++....+..+.    ....+.+|+....  .....+.+|...|++++|+|+
T Consensus       245 wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~  317 (351)
T 3f3f_A          245 FKITEKLSPLASE-----ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV--ELLSEHDDHNGEVWSVSWNLT  317 (351)
T ss_dssp             EEEEECC--------------------------------------------CCSEEE--EEEEEECTTSSCEEEEEECSS
T ss_pred             EeCCCCcCccccC-----CcccceeccCCCcccccccccccccccceeeeecccccc--cEEEEEecccccEEEEEEcCC
Confidence            9998653322211     1122223333444444444333    2334555554432  344556788899999999999


Q ss_pred             CCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188        451 SKVCFSCCSDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       451 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~  478 (504)
                      +++|++++.||.|++|++.+++.+..+.
T Consensus       318 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~  345 (351)
T 3f3f_A          318 GTILSSAGDDGKVRLWKATYSNEFKCMS  345 (351)
T ss_dssp             SCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             CCEEEEecCCCcEEEEecCcCcchhhee
Confidence            9999999999999999999887655544

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2e-36  Score=286.73  Aligned_cols=290  Identities=16%  Similarity=0.251  Sum_probs=233.9

Q ss_pred             EEEEEcCCCcEEEE-ec-CCeEEEEeCCCCCCC-CceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCC
Q psy17188        117 CAVTISNPTKYVYT-GG-KGCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       117 ~~v~~s~~~~~l~~-~~-d~~i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ..++++|+...++. ++ ||.|+||++...+.. ..+..  ..+|.+.|++++|+| ++++|++++.||.|++||+.++.
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPL--VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCC--BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCce--EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence            45788888765553 44 999999999654222 22222  337999999999999 99999999999999999998764


Q ss_pred             c-----cceeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEee--cCCCCCeEEEEEccCCCEEEEEc
Q psy17188        193 P-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       193 ~-----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      .     .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+  ..|...|.+++|+|++++|++++
T Consensus       116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  195 (402)
T 2aq5_A          116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC  195 (402)
T ss_dssp             CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred             CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence            3     3466788999999999999998 69999999999999999999999999  88999999999999999999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCccccee-cccCC-ceEEEEEcCCCCEEEEE---eCCCcEEEEeCCCCCccce
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDN-YIRSVKLLPDGRTLIVG---GEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~v~~~~~~~~~~~l~~~---~~dg~i~v~d~~~~~~~~~  339 (504)
                      .|+.|++||+++++..               ... ..+.. .+.++.|+|++++|+++   +.|+.|++||+++.+....
T Consensus       196 ~d~~i~iwd~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~  260 (402)
T 2aq5_A          196 RDKRVRVIEPRKGTVV---------------AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS  260 (402)
T ss_dssp             TTSEEEEEETTTTEEE---------------EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred             cCCcEEEEeCCCCcee---------------eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence            9999999999988742               111 23443 38899999999999999   7899999999998765344


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      .....+...+..++|+|+++. ++++++.|+.|++||+.....  .+..+....+...+.+++|+|++.++++  .++.+
T Consensus       261 ~~~~~~~~~v~~~~~s~~~~~-l~~~g~~dg~i~i~d~~~~~~--~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~  335 (402)
T 2aq5_A          261 LQELDTSSGVLLPFFDPDTNI-VYLCGKGDSSIRYFEITSEAP--FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIA  335 (402)
T ss_dssp             EEECCCCSSCEEEEEETTTTE-EEEEETTCSCEEEEEECSSTT--CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEE
T ss_pred             EEeccCCCceeEEEEcCCCCE-EEEEEcCCCeEEEEEecCCCc--ceEeecccccCCcccceEEeccccccee--cceeE
Confidence            444456678999999999984 445677899999999987542  1223333346788999999999998765  56689


Q ss_pred             EEeeCCCCC
Q psy17188        420 SIWDLASPT  428 (504)
Q Consensus       420 ~iwd~~~~~  428 (504)
                      ++|++.++.
T Consensus       336 ~~~~l~~~~  344 (402)
T 2aq5_A          336 RFYKLHERK  344 (402)
T ss_dssp             EEEEEETTE
T ss_pred             EEEEcCCCc
Confidence            999998654

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-35  Score=279.49  Aligned_cols=259  Identities=15%  Similarity=0.216  Sum_probs=221.5

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRS  271 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~  271 (504)
                      ...+.+|...|++++|+|++++|++++.||.|++||+.  +++.+..+.+|...|.+++|+++  +++|++++.||.|++
T Consensus         4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i   83 (379)
T 3jrp_A            4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI   83 (379)
T ss_dssp             -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred             cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence            45678999999999999999999999999999999998  66788889999999999999976  899999999999999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ||+.+++...             ......+...|.+++|+|+  +++|++++.|+.|++||++.........+..|...+
T Consensus        84 wd~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v  150 (379)
T 3jrp_A           84 WKEENGRWSQ-------------IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV  150 (379)
T ss_dssp             EEEETTEEEE-------------EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred             EEcCCCceeE-------------eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence            9999886321             3334457788999999999  999999999999999999988766777778899999


Q ss_pred             eeEEECC-------------CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEe
Q psy17188        350 YALAISP-------------DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVG  413 (504)
Q Consensus       350 ~~~~~~~-------------~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~  413 (504)
                      .+++|+|             ++.  ++++++.|+.|++||++....... .......|...|.+++|+|+   +++|+++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~  227 (379)
T 3jrp_A          151 NSASWAPATIEEDGEHNGTKESR--KFVTGGADNLVKIWKYNSDAQTYV-LESTLEGHSDWVRDVAWSPTVLLRSYLASV  227 (379)
T ss_dssp             EEEEECCCC----------CTTC--EEEEEETTSCEEEEEEETTTTEEE-EEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred             EEEEEcCccccccccccCCCCCC--EEEEEeCCCeEEEEEecCCCccee-eEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence            9999999             455  899999999999999986532211 12233457889999999999   8999999


Q ss_pred             eCCCcEEEeeCCCCCc---ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        414 GEASNLSIWDLASPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       414 ~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      +.||.|++||++++..   ........+...|++++|+|++++|++++.||.|++|++..
T Consensus       228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence            9999999999987652   23334455788899999999999999999999999999874

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=275.64  Aligned_cols=306  Identities=14%  Similarity=0.222  Sum_probs=232.8

Q ss_pred             ccceeee-cCCCcEEEEEEcCC---CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec
Q psy17188        104 ARQINTL-SHGEVVCAVTISNP---TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  178 (504)
Q Consensus       104 ~~~~~~~-~h~~~V~~v~~s~~---~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  178 (504)
                      .+.+..+ +|.+.|++++|+|+   +++|++++ |+.|+|||+++.+.   .......+|...|.+++|+|++++|++++
T Consensus        29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  105 (368)
T 3mmy_A           29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTAS  105 (368)
T ss_dssp             TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred             cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence            3445555 89999999999999   59999988 99999999986321   11123337899999999999999999999


Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEE--CCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAI--SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                      .|+.|++||+.+++   ...+..|...|.+++|  ++++++|++++.|+.|++||+++++.+..+..+. .+.++.+.+ 
T Consensus       106 ~dg~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~-  180 (368)
T 3mmy_A          106 CDKTAKMWDLSSNQ---AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY-  180 (368)
T ss_dssp             TTSEEEEEETTTTE---EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET-
T ss_pred             CCCcEEEEEcCCCC---ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC-
Confidence            99999999998765   3346779999999999  8999999999999999999999999988888654 666776664 


Q ss_pred             CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE----EEEEeCCCcEEEEeCC
Q psy17188        257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT----LIVGGEASNLSIWDLA  332 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~dg~i~v~d~~  332 (504)
                       ..+++++.++.+++|+++.........             .........++.+.++...    +++++.|+.|++||++
T Consensus       181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~  246 (368)
T 3mmy_A          181 -PMAVVATAERGLIVYQLENQPSEFRRI-------------ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN  246 (368)
T ss_dssp             -TEEEEEEGGGCEEEEECSSSCEEEEEC-------------CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred             -CeeEEEeCCCcEEEEEeccccchhhhc-------------cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence             478889999999999998765432111             1122334555555554443    9999999999999998


Q ss_pred             CCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        333 SPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       333 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      .... .....+..|....                                     .......+...|.+++|+|++++|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~sp~~~~l~  289 (368)
T 3mmy_A          247 PPNPAKDNFTFKCHRSNG-------------------------------------TNTSAPQDIYAVNGIAFHPVHGTLA  289 (368)
T ss_dssp             CSCHHHHSEEEECSEEC-----------------------------------------CCCEEECCEEEEEECTTTCCEE
T ss_pred             CCCccccceeeeeeeccc-------------------------------------ccccccccccceEEEEEecCCCEEE
Confidence            7633 2222222221100                                     0001113345788999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      +++.||.|++||+.+++.  ...+..|...|++++|+|++++|++++.|+..+.|++.+
T Consensus       290 s~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~  346 (368)
T 3mmy_A          290 TVGSDGRFSFWDKDARTK--LKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN  346 (368)
T ss_dssp             EEETTSCEEEEETTTTEE--EEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred             EEccCCeEEEEECCCCcE--EEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence            999999999999997644  455667888999999999999999999988666555443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=9.8e-36  Score=282.01  Aligned_cols=289  Identities=16%  Similarity=0.223  Sum_probs=233.3

Q ss_pred             ceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCc--cceeeeecCcCceEEEEECC-CCCEEEEEeCCCcEEEEECCCC-
Q psy17188        161 YIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQ-  235 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~-  235 (504)
                      ....++++|+...++ +++.||.|+||++.....  .....+.+|...|.+++|+| ++++|++++.||.|++||+.++ 
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence            344678888765544 478899999999965422  23445778999999999999 8999999999999999999988 


Q ss_pred             ------eEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee--cccCCceE
Q psy17188        236 ------TLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC--LQRDNYIR  306 (504)
Q Consensus       236 ------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~  306 (504)
                            +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++..               ...  ..|...|.
T Consensus       116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---------------~~~~~~~~~~~v~  180 (402)
T 2aq5_A          116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV---------------LTLGPDVHPDTIY  180 (402)
T ss_dssp             CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE---------------EEECTTTCCSCEE
T ss_pred             CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc---------------EEEecCCCCCceE
Confidence                  5678889999999999999997 69999999999999999988742               222  45788999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-ccCCCc-eeeEEECCCCCCceeeec---cCCCeEEEEecCCCC
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPA-CYALAISPDSKSPFFSSH---HYKSCVKVWDISQPG  381 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~---~~~~~i~i~d~~~~~  381 (504)
                      +++|+|++++|++++.|+.|++||+++++  ....+ ..|... +..+.|+|++.  +++++   +.++.|++||++...
T Consensus       181 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~l~~g~~~~~d~~i~iwd~~~~~  256 (402)
T 2aq5_A          181 SVDWSRDGALICTSCRDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSEGK--ILTTGFSRMSERQVALWDTKHLE  256 (402)
T ss_dssp             EEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECSTTE--EEEEEECTTCCEEEEEEETTBCS
T ss_pred             EEEECCCCCEEEEEecCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCCCc--EEEEeccCCCCceEEEEcCcccc
Confidence            99999999999999999999999999864  33344 455444 89999999987  78887   789999999998754


Q ss_pred             CCCcccccccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeCCCCCc-ceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188        382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       382 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                      .....   ....+...+.+++|+|++++|++ ++.|+.|++||+.+++. ........+...+.+++|+|++.++++  .
T Consensus       257 ~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~  331 (402)
T 2aq5_A          257 EPLSL---QELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--K  331 (402)
T ss_dssp             SCSEE---EECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--G
T ss_pred             CCceE---EeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--c
Confidence            32211   22346677999999999999975 55799999999998774 333333346788999999999998775  4


Q ss_pred             CCcEEEEEcCCcce
Q psy17188        460 DGNIAVWDLHNQTL  473 (504)
Q Consensus       460 dg~i~iwd~~~~~~  473 (504)
                      ++.+++|++.++++
T Consensus       332 ~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          332 CEIARFYKLHERKC  345 (402)
T ss_dssp             TEEEEEEEEETTEE
T ss_pred             ceeEEEEEcCCCcE
Confidence            66899999988754

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3.8e-35  Score=280.82  Aligned_cols=296  Identities=15%  Similarity=0.316  Sum_probs=231.9

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +|...|.+++|  ++++|++|+.||.|++||+.+++  ....+.+|...|.+++|  ++++|++|+.||.|++||+.+++
T Consensus       131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence            56678988877  79999999999999999998765  36678899999999999  78899999999999999999999


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .+..+.+|...|.+++|++  ..+++++.||.|++||+++++....            ......|...|.++++  ++++
T Consensus       205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~------------~~~~~~~~~~v~~~~~--~~~~  268 (435)
T 1p22_A          205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITL------------RRVLVGHRAAVNVVDF--DDKY  268 (435)
T ss_dssp             EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEE------------EEEECCCSSCEEEEEE--ETTE
T ss_pred             EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCcee------------eeEecCCCCcEEEEEe--CCCE
Confidence            9999999999999999974  5999999999999999988753110            1334567888999999  7889


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.||.|++||++++  .....+..|...+.++.+.+  .  ++++++.|+.|++||++++...     .....|..
T Consensus       269 l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~--~--~l~~g~~dg~i~iwd~~~~~~~-----~~~~~h~~  337 (435)
T 1p22_A          269 IVSASGDRTIKVWNTSTC--EFVRTLNGHKRGIACLQYRD--R--LVVSGSSDNTIRLWDIECGACL-----RVLEGHEE  337 (435)
T ss_dssp             EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEEET--T--EEEEEETTSCEEEEETTTCCEE-----EEECCCSS
T ss_pred             EEEEeCCCeEEEEECCcC--cEEEEEcCCCCcEEEEEeCC--C--EEEEEeCCCeEEEEECCCCCEE-----EEEeCCcC
Confidence            999999999999999887  45566778888999999853  3  8999999999999999875322     22235788


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc-------ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .|.+++|  ++++|++|+.||.|++||+.++..       .....+..|...|++++|  ++++|++++.||.|++||+.
T Consensus       338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~  413 (435)
T 1p22_A          338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL  413 (435)
T ss_dssp             CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred             cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence            8999999  788999999999999999865431       145566788899999999  78899999999999999998


Q ss_pred             CcceEEEEeecCCceEEEEEc
Q psy17188        470 NQTLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       470 ~~~~~~~~~~h~~~v~~~~~s  490 (504)
                      +........ ...+..++.|.
T Consensus       414 ~~~~~~~~~-~~~~~~~~~~~  433 (435)
T 1p22_A          414 NDPAAQAEP-PRSPSRTYTYI  433 (435)
T ss_dssp             ---------------------
T ss_pred             CCCCcccCC-CCCCccceeee
Confidence            876654443 23345555554

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.8e-35  Score=273.38  Aligned_cols=297  Identities=15%  Similarity=0.199  Sum_probs=215.5

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~  187 (504)
                      +|.+.|++++|+|++++|++++ |+.|++||+.++..... ......+|...|.+++|+|  ++++|++++.|+.|++||
T Consensus         9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A            9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE-LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE   87 (351)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence            8999999999999999999998 99999999987533211 2223347999999999999  699999999999999999


Q ss_pred             CCCCCc-------cceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEeec-------------CCC
Q psy17188        188 LASPTP-------RIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------------GHT  245 (504)
Q Consensus       188 ~~~~~~-------~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~h~  245 (504)
                      +.+++.       .....+..|...|.+++|+|+  +++|++++.|+.|++||+++++.+..+.             .|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL  167 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred             cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence            987643       335667789999999999999  9999999999999999999876544432             588


Q ss_pred             CCeEEEEEccC---CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC----CEEE
Q psy17188        246 DGASCIDISAD---GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG----RTLI  318 (504)
Q Consensus       246 ~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~  318 (504)
                      ..+.+++|+|+   +.++++++.|+.+.+|+...++...             ......|...|.+++|+|++    ++|+
T Consensus       168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~  234 (351)
T 3f3f_A          168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV-------------AAKLPGHKSLIRSISWAPSIGRWYQLIA  234 (351)
T ss_dssp             CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE-------------EEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred             cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee-------------eeecCCCCcceeEEEECCCCCCcceEEE
Confidence            89999999997   8999999999999888888776432             22334578889999999998    8999


Q ss_pred             EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc----CCCeEEEEecCCCCCCCcccccccccC
Q psy17188        319 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH----YKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       319 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      +++.||.|++||++.......  ..............+...  ....+.    ....+.+|+...     .........|
T Consensus       235 s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h  305 (351)
T 3f3f_A          235 TGCKDGRIRIFKITEKLSPLA--SEESLTNSNMFDNSADVD--MDAQGRSDSNTEEKAELQSNLQ-----VELLSEHDDH  305 (351)
T ss_dssp             EEETTSCEEEEEEEECC-------------------------------------------CCSEE-----EEEEEEECTT
T ss_pred             EEcCCCeEEEEeCCCCcCccc--cCCcccceeccCCCcccc--cccccccccccceeeeeccccc-----ccEEEEEecc
Confidence            999999999999986532221  111111222222222222  122221    122233332211     1112223357


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  430 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~  430 (504)
                      ...|++++|+|++++|++++.||.|++||+.+++..
T Consensus       306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~  341 (351)
T 3f3f_A          306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF  341 (351)
T ss_dssp             SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred             cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence            889999999999999999999999999999876543

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=6e-35  Score=279.46  Aligned_cols=280  Identities=18%  Similarity=0.344  Sum_probs=227.4

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      +|...|.++++  ++++|++++ ||.|++||+.+++.   ..  ...+|...|.+++|  ++++|++|+.||.|++||+.
T Consensus       131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~---~~--~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~  201 (435)
T 1p22_A          131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC---KR--ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN  201 (435)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE---EE--EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred             CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE---EE--EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence            67788999987  688898888 99999999987532   22  23379999999999  78999999999999999999


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE---EeecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV---RQFQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      +++.  ...+..|...|.+++|++  .++++++.|+.|++||+.+++..   ..+.+|...|.+++|  ++++|++++.|
T Consensus       202 ~~~~--~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d  275 (435)
T 1p22_A          202 TGEM--LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD  275 (435)
T ss_dssp             SCCE--EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred             CCcE--EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence            7653  667788999999999974  49999999999999999987654   677889999999999  67899999999


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      |.|++||+++++.               ......|...+.++.+  +++++++++.||.|++||++++  .....+..|.
T Consensus       276 g~i~vwd~~~~~~---------------~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~  336 (435)
T 1p22_A          276 RTIKVWNTSTCEF---------------VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHE  336 (435)
T ss_dssp             SEEEEEETTTCCE---------------EEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--CEEEEECCCS
T ss_pred             CeEEEEECCcCcE---------------EEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC--CEEEEEeCCc
Confidence            9999999998874               2333467788999988  4689999999999999999987  4556677888


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc----ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP----VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ..+.++++  ++.  ++++++.|+.|++||+........    ........|...|.+++|  ++++|++++.||.|++|
T Consensus       337 ~~v~~~~~--~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iw  410 (435)
T 1p22_A          337 ELVRCIRF--DNK--RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW  410 (435)
T ss_dssp             SCEEEEEC--CSS--EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEE
T ss_pred             CcEEEEEe--cCC--EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEE
Confidence            89999999  444  899999999999999865432111    122334568889999999  78899999999999999


Q ss_pred             eCCCCCcc
Q psy17188        423 DLASPTPR  430 (504)
Q Consensus       423 d~~~~~~~  430 (504)
                      |+.+....
T Consensus       411 d~~~~~~~  418 (435)
T 1p22_A          411 DFLNDPAA  418 (435)
T ss_dssp             C-------
T ss_pred             ECCCCCCc
Confidence            99876543

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.3e-36  Score=303.43  Aligned_cols=258  Identities=16%  Similarity=0.274  Sum_probs=222.9

Q ss_pred             cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECC
Q psy17188        156 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       156 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~  233 (504)
                      .+|.+.|++++|+|++++|++|+.||.|++||+..+.......+.+|...|++++|+++  +++|++++.||.|++||+.
T Consensus         6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~   85 (753)
T 3jro_A            6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE   85 (753)
T ss_dssp             --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred             ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence            38999999999999999999999999999999986666667788899999999999988  8999999999999999999


Q ss_pred             CCe--EEEeecCCCCCeEEEEEccC--CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        234 NQT--LVRQFQGHTDGASCIDISAD--GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       234 ~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      +++  .+..+.+|...|.+++|+|+  ++.+++++.||.|++||++++...             .......+...|.+++
T Consensus        86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-------------~~~~~~~~~~~v~~l~  152 (753)
T 3jro_A           86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------SPIIIDAHAIGVNSAS  152 (753)
T ss_dssp             TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-------------CCEEEECCSSCEEEEE
T ss_pred             CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-------------ceeEeecCCCceEEEE
Confidence            987  77888899999999999998  999999999999999999877321             1334456788999999


Q ss_pred             EcC-------------CCCEEEEEeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCC---CCCceeeeccCCCe
Q psy17188        310 LLP-------------DGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPD---SKSPFFSSHHYKSC  371 (504)
Q Consensus       310 ~~~-------------~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~  371 (504)
                      |+|             +++.+++++.||.|++||+++...  .....+..|...|.+++|+|+   +.  ++++++.|+.
T Consensus       153 ~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~--~l~s~s~Dg~  230 (753)
T 3jro_A          153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YLASVSQDRT  230 (753)
T ss_dssp             ECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEESSSC
T ss_pred             ecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC--EEEEEecCCE
Confidence            999             589999999999999999987643  344566788999999999999   66  8999999999


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                      |++||+................+...|.+++|+|+|++|++++.||.|++|++....
T Consensus       231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            999999886544333444445678889999999999999999999999999998543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.2e-33  Score=270.75  Aligned_cols=329  Identities=13%  Similarity=0.132  Sum_probs=249.0

Q ss_pred             cCCCcEEEEE---EcCCCcEEEEe--------------c-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCC
Q psy17188        111 SHGEVVCAVT---ISNPTKYVYTG--------------G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus       111 ~h~~~V~~v~---~s~~~~~l~~~--------------~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  172 (504)
                      .....+..++   |+|+++.+...              . ++.+.||.++....  .............+.+++|+|++.
T Consensus        58 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~~~~  135 (433)
T 3bws_A           58 DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI--THRFISRFKTGFQPKSVRFIDNTR  135 (433)
T ss_dssp             ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC--SEEEEEEEECSSCBCCCEESSSSE
T ss_pred             ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC--cceEEEEEcCCCCceEEEEeCCCe
Confidence            3456677777   77776655432              1 33335555543211  112222223345577999999888


Q ss_pred             EEEEecCCCcEEEEeCCCCCcccee---eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKA---ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      ++++++.++.|++||+.+++.....   .+.+|...|.+++|+++++++++++.|+.|++||+++++.+..+..|...+.
T Consensus       136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~  215 (433)
T 3bws_A          136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK  215 (433)
T ss_dssp             EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE
T ss_pred             EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee
Confidence            8888888999999999977643211   3457888999999999999999999999999999999999999998999999


Q ss_pred             EEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------
Q psy17188        250 CIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------  321 (504)
Q Consensus       250 ~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------  321 (504)
                      +++|+|+++.++ +++.|+.|++||+++++.                .........+.+++|+|+++++++++       
T Consensus       216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~  279 (433)
T 3bws_A          216 ILLYDPIRDLVYCSNWISEDISVIDRKTKLE----------------IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE  279 (433)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEE----------------EEECCCCSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred             EEEEcCCCCEEEEEecCCCcEEEEECCCCcE----------------EEEecCCCCceEEEEcCCCCEEEEEECCCCccc
Confidence            999999999875 555899999999998864                22223345689999999999999887       


Q ss_pred             -CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE
Q psy17188        322 -EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS  400 (504)
Q Consensus       322 -~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~  400 (504)
                       .|+.|++||+.+++....   ..+...+..++|+|+++. ++++++.++.+++||+......      ....+...+.+
T Consensus       280 ~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g~~-l~~~~~~~~~v~v~d~~~~~~~------~~~~~~~~~~~  349 (433)
T 3bws_A          280 SGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNTENK-IYVSDMCCSKIEVYDLKEKKVQ------KSIPVFDKPNT  349 (433)
T ss_dssp             SCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSSTTE-EEEEETTTTEEEEEETTTTEEE------EEEECSSSEEE
T ss_pred             cCCCeEEEEECCCCcEEee---ccCCCCcceEEECCCCCE-EEEEecCCCEEEEEECCCCcEE------EEecCCCCCCe
Confidence             588999999987643222   233447889999999975 6677789999999999854321      12235677899


Q ss_pred             EEEcCCCCEEEEeeC---------------CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC-CCcEE
Q psy17188        401 VKLLPDGRTLIVGGE---------------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIA  464 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~i~  464 (504)
                      ++|+|+|++|++++.               ||.|++||+.+++.......   ...+.+++|+|++++|++++. |+.|+
T Consensus       350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~  426 (433)
T 3bws_A          350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIR  426 (433)
T ss_dssp             EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred             EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence            999999999988876               57999999988765444332   346899999999999998875 99999


Q ss_pred             EEEcCC
Q psy17188        465 VWDLHN  470 (504)
Q Consensus       465 iwd~~~  470 (504)
                      +|+++.
T Consensus       427 v~~~~~  432 (433)
T 3bws_A          427 VYRRDG  432 (433)
T ss_dssp             EEEETT
T ss_pred             EEEecC
Confidence            999864

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-34  Score=275.73  Aligned_cols=294  Identities=13%  Similarity=0.139  Sum_probs=224.7

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeee---------------------------------------
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLD---------------------------------------  154 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~---------------------------------------  154 (504)
                      .++.+++|+++|++|+++.++.|++||+.+++....+..+.                                       
T Consensus         5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            57889999999999988889999999998875111111111                                       


Q ss_pred             -------------ecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCC--CCCccceeeeecCcCceEEEEECCCCCEE
Q psy17188        155 -------------CLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVC  218 (504)
Q Consensus       155 -------------~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  218 (504)
                                   ..+|.+.|.+++|+|++++| ++++.|+.|++||+.  +++.........|...|.+++|+|++++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l  164 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV  164 (450)
T ss_dssp             ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence                         01344579999999999996 889999999999998  55543333333677889999999999999


Q ss_pred             EEEeCCCcEEEEECCCCeEEE----eecCCCCCeEEEEEccC---CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        219 FSCCSDGNIAVWDLHNQTLVR----QFQGHTDGASCIDISAD---GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       219 ~~~~~dg~i~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                      ++++.++.|++|++.+++...    .+.+|...|.+++|+|+   +++|++++.|+.|++||+++++..           
T Consensus       165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~-----------  233 (450)
T 2vdu_B          165 IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV-----------  233 (450)
T ss_dssp             EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE-----------
T ss_pred             EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee-----------
Confidence            999999999999998877554    77889999999999999   999999999999999999987632           


Q ss_pred             CcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec-----------------------cCCCc
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------------------SSAPA  348 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-----------------------~~~~~  348 (504)
                         ......|...|.+++|+ ++++|++++.|+.|++||+++++........                       .....
T Consensus       234 ---~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (450)
T 2vdu_B          234 ---DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA  309 (450)
T ss_dssp             ---EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred             ---eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence               11134678899999999 9999999999999999999987644333321                       23356


Q ss_pred             eeeEEECCCCCCceeeecc-CCCeEEEEec--CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC------CCcE
Q psy17188        349 CYALAISPDSKSPFFSSHH-YKSCVKVWDI--SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNL  419 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~------dg~i  419 (504)
                      +..++++|+++  ++++++ .++.|++|++  ...........+.  .+ ..+.+++|+|++.++++++.      +..|
T Consensus       310 v~~i~~~~~~~--~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i  384 (450)
T 2vdu_B          310 VSKIIKSKNLP--FVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFA  384 (450)
T ss_dssp             EEEEEECSSSS--EEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSE
T ss_pred             EEEEEEeCCCC--EEEEEECCCCeEEEEEeccCCCCceeeccEec--cC-CceEEEEecCCcEEEEEecccCCCCCCcce
Confidence            88999999988  566666 8999999999  3322222222222  23 78999999996544444443      4458


Q ss_pred             EEeeCCCC
Q psy17188        420 SIWDLASP  427 (504)
Q Consensus       420 ~iwd~~~~  427 (504)
                      .+|.+...
T Consensus       385 ~v~~~~~~  392 (450)
T 2vdu_B          385 KFIEYNLN  392 (450)
T ss_dssp             EEEEEETT
T ss_pred             EEEEEEcC
Confidence            88876543

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.4e-34  Score=272.35  Aligned_cols=260  Identities=16%  Similarity=0.125  Sum_probs=177.1

Q ss_pred             cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE-----EeecCCCCCeEEEEEcc--------CCCEEEEEcCCC
Q psy17188        201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-----RQFQGHTDGASCIDISA--------DGTKLWTGGLDN  267 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~~~h~~~v~~~~~~~--------~~~~l~s~~~dg  267 (504)
                      .|........+.+++.+|++++.|++|++||+++++..     ..+.+|.+.|.+++|+|        |+++|++++.|+
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            34444555666778889999999999999999988643     45789999999999998        788999999999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      +|++||++++..               ......+...+.+++|+|++ ++|++++.|++|++||+++++...........
T Consensus       167 tv~~Wd~~~~~~---------------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~  231 (393)
T 4gq1_A          167 TLIIWRLTDEGP---------------ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV  231 (393)
T ss_dssp             EEEEEEEETTEE---------------EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred             eEEEEECCCCce---------------eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence            999999987653               34455778899999999987 47999999999999999887533222111111


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      .....+...+..            ..              .......+...+.++.|+ +|++.|++++.|+.+++||+.
T Consensus       232 ~~~~~~s~~~~~------------~~--------------~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~  285 (393)
T 4gq1_A          232 KNPWLLTLNTLP------------LV--------------NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF  285 (393)
T ss_dssp             SCCCSEEEESGG------------GC--------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred             ccceEEeccccc------------ce--------------eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence            111111111110            00              001112456667788886 799999999999999999997


Q ss_pred             CCCcceeecccCCCCce------------------eEEEECC--CCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceE
Q psy17188        426 SPTPRIKAELTSSAPAC------------------YALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  485 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v------------------~~l~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  485 (504)
                      .+......  ..+...+                  ....++|  ++.++++|+.||.|++||+.+++++..+..|..+|+
T Consensus       286 ~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~  363 (393)
T 4gq1_A          286 ANNDYNEI--SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIV  363 (393)
T ss_dssp             --------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEE
T ss_pred             cCCCCceE--eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEE
Confidence            65432211  1111111                  1223443  444677888999999999999999998899999999


Q ss_pred             EEEEccCCCEEEEecCCC
Q psy17188        486 CIDISADGTKLWTGGLDN  503 (504)
Q Consensus       486 ~~~~s~d~~~l~s~s~Dg  503 (504)
                      +++|+|||++||++++||
T Consensus       364 svafspdG~~LA~as~~G  381 (393)
T 4gq1_A          364 DFCWHQDGSHLAIATEGS  381 (393)
T ss_dssp             EEEECTTSSEEEEEESSE
T ss_pred             EEEEcCCCCEEEEEeCCC
Confidence            999999999999999987

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-33  Score=268.28  Aligned_cols=276  Identities=11%  Similarity=0.102  Sum_probs=221.0

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEeecC-------------------------------------
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQG-------------------------------------  243 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-------------------------------------  243 (504)
                      .++.+++|+++|++|+++ .++.|++||+.+++   .+..+..                                     
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            457899999999966655 57899999999988   5555543                                     


Q ss_pred             -----------------CCCCeEEEEEccCCCEE-EEEcCCCeEEEEECC--CCceEEEeecCCCCCCCcccceecccCC
Q psy17188        244 -----------------HTDGASCIDISADGTKL-WTGGLDNTVRSWDLR--EGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       244 -----------------h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                                       |.+.|.+++|+|++++| ++++.||.|++||+.  +++...             .+....+..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~-------------~~~~~~~~~  150 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK-------------LRKRFCFSK  150 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE-------------EEEEEECSS
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee-------------eeecccCCC
Confidence                             33379999999999996 899999999999998  665311             222235678


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc--ceeeeccCCCceeeEEECCC---CCCceeeeccCCCeEEEEecC
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKAELTSSAPACYALAISPD---SKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      .|.+++|+|++++|++++.+|.+++|++.+....  ....+..|...+.+++|+|+   ++  ++++++.|+.|++||++
T Consensus       151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~d~~i~vwd~~  228 (450)
T 2vdu_B          151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--FIITSDRDEHIKISHYP  228 (450)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--EEEEEETTSCEEEEEES
T ss_pred             CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--EEEEEcCCCcEEEEECC
Confidence            8999999999999999999999999999876543  33356678889999999999   66  89999999999999998


Q ss_pred             CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc----------------------
Q psy17188        379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT----------------------  436 (504)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------------  436 (504)
                      .......    ....|...|.+++|+ ++++|++++.|+.|++||+.+++........                      
T Consensus       229 ~~~~~~~----~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (450)
T 2vdu_B          229 QCFIVDK----WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN  303 (450)
T ss_dssp             CTTCEEE----ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred             CCceeee----eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence            6532211    123578899999999 9999999999999999999988765544321                      


Q ss_pred             -CCCCceeEEEECCCCCEEEEee-CCCcEEEEEc--CCc---ceEEEEeecCCceEEEEEccCCCEEEEecC
Q psy17188        437 -SSAPACYALAISPDSKVCFSCC-SDGNIAVWDL--HNQ---TLVRQFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       437 -~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~--~~~---~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                       .....|..++|+|++++|++++ .|+.|+||++  .++   +.+..+..| ..|.+++|+|++.++++++.
T Consensus       304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~  374 (450)
T 2vdu_B          304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK  374 (450)
T ss_dssp             -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred             ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence             2345689999999999999998 8999999999  665   677788887 88999999996544444443

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5.2e-33  Score=265.27  Aligned_cols=263  Identities=15%  Similarity=0.275  Sum_probs=215.5

Q ss_pred             eeeeeecCCCCceEEEEEccC-CCEEEEecCCCcEEEEeCCC--------CCccceeeeecCcCceEEEEECCCCC-EEE
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLAS--------PTPRIKAELTSSAPACYALAISPDSK-VCF  219 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~  219 (504)
                      +.......|.+.|++++|+|+ +++|++++.||.|++|++..        +.......+.+|...|.+++|+|++. +|+
T Consensus       119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~  198 (430)
T 2xyi_A          119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL  198 (430)
T ss_dssp             EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred             eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence            334455679999999999997 78999999999999999975        22445677889999999999999988 999


Q ss_pred             EEeCCCcEEEEECCCCeE-------EEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        220 SCCSDGNIAVWDLHNQTL-------VRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                      +++.||.|++||+.++..       ...+.+|...|.+++|+| ++.+|++++.|+.|++||++++...          .
T Consensus       199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----------~  268 (430)
T 2xyi_A          199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----------K  268 (430)
T ss_dssp             EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS----------S
T ss_pred             EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC----------c
Confidence            999999999999987422       456778999999999999 6789999999999999999976310          0


Q ss_pred             CcccceecccCCceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS  370 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  370 (504)
                        .......|...|.+++|+|+++ ++++++.||.|++||++... .....+..|...+.+++|+|+++. ++++++.|+
T Consensus       269 --~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~-~l~s~~~d~  344 (430)
T 2xyi_A          269 --PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNET-ILASSGTDR  344 (430)
T ss_dssp             --CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTT-EEEEEETTS
T ss_pred             --ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCC-EEEEEeCCC
Confidence              0223346788899999999887 68899999999999998743 345566778889999999999875 788999999


Q ss_pred             eEEEEecCCCCCCCc---------ccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEEeeCCC
Q psy17188        371 CVKVWDISQPGSKTP---------VSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       371 ~i~i~d~~~~~~~~~---------~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~iwd~~~  426 (504)
                      .|++||+........         ........|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus       345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence            999999987432211         22233345778899999999999 899999999999999874

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-34  Score=292.25  Aligned_cols=256  Identities=15%  Similarity=0.201  Sum_probs=214.5

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC--CCEEEEecCCCcEEEEe
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWD  187 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iw~  187 (504)
                      +|.+.|++++|+|++++|++++ ||.|+|||+..+.   ........+|.+.|++++|+|+  +++|++|+.||.|++||
T Consensus         7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            8999999999999999999998 9999999987421   1222334479999999999988  99999999999999999


Q ss_pred             CCCCCccceeeeecCcCceEEEEECCC--CCEEEEEeCCCcEEEEECCCC--eEEEeecCCCCCeEEEEEcc--------
Q psy17188        188 LASPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISA--------  255 (504)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~--------  255 (504)
                      +.+++......+..|...|.+++|+|+  ++++++++.||.|++||++++  .....+.+|...|.+++|+|        
T Consensus        84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~  163 (753)
T 3jro_A           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  163 (753)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred             CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence            998765567778889999999999999  999999999999999999887  34455678999999999999        


Q ss_pred             -----CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC---CCEEEEEeCCCcEE
Q psy17188        256 -----DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGEASNLS  327 (504)
Q Consensus       256 -----~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~  327 (504)
                           ++.+|++++.||.|++||++++....           ........|...|.+++|+|+   +++|++++.||.|+
T Consensus       164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~  232 (753)
T 3jro_A          164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTY-----------VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI  232 (753)
T ss_dssp             ---CGGGCCEEEEETTSCEEEEEEETTTTEE-----------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred             cccCCCCCEEEEEECCCeEEEEeccCCcccc-----------eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence                 58899999999999999998764210           002334567889999999999   89999999999999


Q ss_pred             EEeCCCCCcc---ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        328 IWDLASPTPR---IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       328 v~d~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      +||+.+....   .......+...+.+++|+|+++  ++++++.|+.|++|++.....
T Consensus       233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~--~l~s~s~Dg~I~vwd~~~~~~  288 (753)
T 3jro_A          233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENLEGK  288 (753)
T ss_dssp             EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC--CEEEECSSSCEECCBCCSSSC
T ss_pred             EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC--EEEEEcCCCEEEEEecCCCCC
Confidence            9999886432   2333445778999999999998  789999999999999986543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5.1e-33  Score=265.34  Aligned_cols=263  Identities=15%  Similarity=0.222  Sum_probs=215.2

Q ss_pred             eeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCC----------CeEEEeecCCCCCeEEEEEccCCC-EEEEEc
Q psy17188        197 AELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHN----------QTLVRQFQGHTDGASCIDISADGT-KLWTGG  264 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~  264 (504)
                      .....|...|++++|+|+ +.+|++++.||.|++||+.+          .+.+..+.+|...|.+++|+|++. +|++++
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~  201 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS  201 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence            445678999999999997 67999999999999999986          577788889999999999999988 999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCC-ccceeee
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT-PRIKAEL  342 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~  342 (504)
                      .||.|++||+..+.......        ........|...|.+++|+| ++.+|++++.|+.|++||+++.. ......+
T Consensus       202 ~dg~i~vwd~~~~~~~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~  273 (430)
T 2xyi_A          202 DDHTICLWDINATPKEHRVI--------DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV  273 (430)
T ss_dssp             TTSCEEEEETTSCCBGGGEE--------ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred             CCCeEEEEeCCCCCCCCcee--------ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence            99999999998743100000        00223346788899999999 77899999999999999999763 2344556


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC-EEEEeeCCCcEEE
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR-TLIVGGEASNLSI  421 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~i  421 (504)
                      ..|...+.+++|+|+++. ++++++.|+.|++||++.....  +  .....|...|.+++|+|+++ +|++++.|+.|++
T Consensus       274 ~~~~~~v~~i~~~p~~~~-~l~tg~~dg~v~vwd~~~~~~~--~--~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i  348 (430)
T 2xyi_A          274 DAHTAEVNCLSFNPYSEF-ILATGSADKTVALWDLRNLKLK--L--HSFESHKDEIFQVQWSPHNETILASSGTDRRLHV  348 (430)
T ss_dssp             ECCSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCTTSC--S--EEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred             ecCCCCeEEEEeCCCCCC-EEEEEeCCCeEEEEeCCCCCCC--e--EEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence            688889999999999875 6889999999999999874321  1  22235788999999999985 7999999999999


Q ss_pred             eeCCCCC------------cceeecccCCCCceeEEEECCCCC-EEEEeeCCCcEEEEEcCCcc
Q psy17188        422 WDLASPT------------PRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       422 wd~~~~~------------~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ||+....            ........+|...|++++|+|+++ +|++++.||.|+||++.+..
T Consensus       349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~  412 (430)
T 2xyi_A          349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV  412 (430)
T ss_dssp             EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred             EeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence            9998632            244556678888999999999999 99999999999999987643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=4.2e-32  Score=259.97  Aligned_cols=348  Identities=14%  Similarity=0.153  Sum_probs=250.8

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEE---EccCCCEEEE---------
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK---LLPDGRTLIV---------  176 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~---~s~~~~~l~~---------  176 (504)
                      .....|..+.+.|....++...  ....+++...               ....+..++   |+|+++.++.         
T Consensus        25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~   89 (433)
T 3bws_A           25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLEMD---------------KNIALVEMAIPVYKDEKEIELKLSSPGFQNS   89 (433)
T ss_dssp             --CEEEEEEEEECCTTCEEEETTEECCEEEEEEE---------------TTEEEEEEEEECCCTTCCEEEEEECTTBCCE
T ss_pred             cCCcEEEEEecccccCceEEcCceecceeeeecc---------------cCCccEEEEEeeccCCCcEEEEEEccccCcc
Confidence            4556778888888543333333  2223333221               223345555   5665554443         


Q ss_pred             -----ecCCC--cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----eecCC
Q psy17188        177 -----GGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-----QFQGH  244 (504)
Q Consensus       177 -----~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~h  244 (504)
                           ++.++  .|..||..++.......+..+. .+.+++|+|++.++++++.++.|++||+.+++.+.     .+.+|
T Consensus        90 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~  168 (433)
T 3bws_A           90 SYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKK  168 (433)
T ss_dssp             EEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTT
T ss_pred             eeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccccc
Confidence                 33344  4444444434333444444443 45689999977788888889999999999998887     45678


Q ss_pred             CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCC
Q psy17188        245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEA  323 (504)
Q Consensus       245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d  323 (504)
                      ...|.+++|+++++++++++.|+.|++||+++++..               .....+...+.+++|+|+++.++++ +.+
T Consensus       169 ~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  233 (433)
T 3bws_A          169 LGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK---------------ATVDLTGKWSKILLYDPIRDLVYCSNWIS  233 (433)
T ss_dssp             CCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE---------------EEEECSSSSEEEEEEETTTTEEEEEETTT
T ss_pred             CCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE---------------EEEcCCCCCeeEEEEcCCCCEEEEEecCC
Confidence            999999999999999999999999999999987642               2223566789999999999988655 479


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--------CCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--------YKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      +.|++||+++++.  ...+.. ...+..++++|+++  .+++++        .|+.|++||+......      ....+.
T Consensus       234 ~~i~~~d~~~~~~--~~~~~~-~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~------~~~~~~  302 (433)
T 3bws_A          234 EDISVIDRKTKLE--IRKTDK-IGLPRGLLLSKDGK--ELYIAQFSASNQESGGGRLGIYSMDKEKLI------DTIGPP  302 (433)
T ss_dssp             TEEEEEETTTTEE--EEECCC-CSEEEEEEECTTSS--EEEEEEEESCTTCSCCEEEEEEETTTTEEE------EEEEEE
T ss_pred             CcEEEEECCCCcE--EEEecC-CCCceEEEEcCCCC--EEEEEECCCCccccCCCeEEEEECCCCcEE------eeccCC
Confidence            9999999987643  333333 34689999999998  455544        4889999999864221      112344


Q ss_pred             CceEEEEEcCCCCEE-EEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC---------------
Q psy17188        396 NYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---------------  459 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~---------------  459 (504)
                      ..+..++|+|+++.+ ++++.++.|++||+.+++......   +...+.+++|+|++++|++++.               
T Consensus       303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~  379 (433)
T 3bws_A          303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV  379 (433)
T ss_dssp             ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred             CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence            578899999999755 566889999999999765444332   4566889999999999988876               


Q ss_pred             CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecC-CCC
Q psy17188        460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNT  504 (504)
Q Consensus       460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~-Dgt  504 (504)
                      ||.|++||+.+++.+..+.. ...+.+++|+||+++|++++. |++
T Consensus       380 dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~  424 (433)
T 3bws_A          380 LGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQ  424 (433)
T ss_dssp             CCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTE
T ss_pred             ceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCe
Confidence            57999999999999988875 457999999999999998875 663

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=9.5e-32  Score=253.84  Aligned_cols=332  Identities=16%  Similarity=0.201  Sum_probs=237.5

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCCCCCccceeeeecCc
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSA  203 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  203 (504)
                      .++++++ |+.|++||+++++   .+..+   .+...+.+++|+|++++| ++++.|+.|++||+.+++.  ...+..+.
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~---~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~--~~~~~~~~   74 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNK---VTATI---PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--IATVPAGS   74 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTE---EEEEE---ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--EEEEECSS
T ss_pred             EEEEEcCCCCEEEEEECCCCe---EEEEe---ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE--EEEEECCC
Confidence            4566666 9999999998752   22222   234568999999999987 6677899999999987654  33444443


Q ss_pred             CceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEE
Q psy17188        204 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKV  281 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~  281 (504)
                       .+.+++|+|++++|+++ +.++.|++||+.+++.+..+.. ...+.+++|+|+++.| ++++.|+.|++||+.+++.. 
T Consensus        75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-  151 (391)
T 1l0q_A           75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI-  151 (391)
T ss_dssp             -SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-
T ss_pred             -CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-
Confidence             79999999999977654 4679999999999999888874 4578999999999977 78888999999999988742 


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                                     ........+.+++|+|+++.+ ++++.++.|++||+++.+..  ..+ .+...+..++|+|+++.
T Consensus       152 ---------------~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~-~~~~~~~~~~~~~~g~~  213 (391)
T 1l0q_A          152 ---------------NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI--DTV-KVEAAPSGIAVNPEGTK  213 (391)
T ss_dssp             ---------------EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEE-ECSSEEEEEEECTTSSE
T ss_pred             ---------------EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE--EEE-ecCCCccceEECCCCCE
Confidence                           222334557899999999987 56678899999999886432  222 23457899999999984


Q ss_pred             ceeeecc---CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE-EEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        361 PFFSSHH---YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       361 ~~~~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                        +++++   .++.|++||+......   ..   ......+.+++|+|++++| ++++.|+.|++||+.+++........
T Consensus       214 --l~~~~~~~~~~~v~~~d~~~~~~~---~~---~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~  285 (391)
T 1l0q_A          214 --AYVTNVDKYFNTVSMIDTGTNKIT---AR---IPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG  285 (391)
T ss_dssp             --EEEEEECSSCCEEEEEETTTTEEE---EE---EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred             --EEEEecCcCCCcEEEEECCCCeEE---EE---EecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence              44444   6899999999765321   11   1223457899999999987 56678999999999987654433222


Q ss_pred             CCC---------------CceeEEEECCC------C--CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188        437 SSA---------------PACYALAISPD------S--KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  493 (504)
Q Consensus       437 ~~~---------------~~v~~l~~s~~------~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~  493 (504)
                      ...               ..+........      .  ..+...+.|...++|++.++...    .+..+  ...|+++|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~~--~~~~~~~g  359 (391)
T 1l0q_A          286 KNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQNP--THTYSETG  359 (391)
T ss_dssp             SSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----CSSSC--EECCSSCE
T ss_pred             cCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----CcCCC--eEEeCCCc
Confidence            110               01111111111      1  34556667889999999888642    12222  35688888


Q ss_pred             CEEEEec
Q psy17188        494 TKLWTGG  500 (504)
Q Consensus       494 ~~l~s~s  500 (504)
                      .|.++..
T Consensus       360 ~y~~~~~  366 (391)
T 1l0q_A          360 IYTVRLT  366 (391)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEE
Confidence            8876643

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=5e-33  Score=258.07  Aligned_cols=282  Identities=10%  Similarity=0.091  Sum_probs=211.1

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~  235 (504)
                      .|...|.+++|+||+++|++|+.++ +++|++.+.+..  ..  .+...+..+++.++++.+ ++++.|++|++||+.++
T Consensus        17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~   91 (355)
T 3vu4_A           17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI--MS--QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK   91 (355)
T ss_dssp             --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE--EE--EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred             cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee--ee--eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence            7899999999999999999998765 789998764432  22  222247788888888877 56778899999999999


Q ss_pred             eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      +.+..+. +...|.+++++++.  ++++ .|+.|++||+.++ +.                +.....  ....+++++  
T Consensus        92 ~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~----------------~~~~~~--~~~~~~~s~--  147 (355)
T 3vu4_A           92 QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR----------------ITDDIR--FGGVCEFSN--  147 (355)
T ss_dssp             EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB----------------SSCCEE--EEEEEEEET--
T ss_pred             cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee----------------eEEecc--CCceEEEEc--
Confidence            9999988 77899999999764  4443 4789999999887 31                111111  344556666  


Q ss_pred             CEEEE--EeCCCcEEEEeCCCCCc-------------cc-eeeeccCCCceeeEEECCCCCCceeeeccCCCe-EEEEec
Q psy17188        315 RTLIV--GGEASNLSIWDLASPTP-------------RI-KAELTSSAPACYALAISPDSKSPFFSSHHYKSC-VKVWDI  377 (504)
Q Consensus       315 ~~l~~--~~~dg~i~v~d~~~~~~-------------~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-i~i~d~  377 (504)
                      .++++  ++.+|.|++||+++...             .. ...+..|...|.+++|+|+++  ++++++.|++ |++||+
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~--~l~s~s~d~~~v~iwd~  225 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD--MVATCSQDGTIIRVFKT  225 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS--EEEEEETTCSEEEEEET
T ss_pred             cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC--EEEEEeCCCCEEEEEEC
Confidence            56666  58899999999987531             01 566788999999999999998  8999999998 999999


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc---------------------
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---------------------  436 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------------  436 (504)
                      +++....   .+....|...|.+++|+|++++|++++.|+.|++||++.........+.                     
T Consensus       226 ~~~~~~~---~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (355)
T 3vu4_A          226 EDGVLVR---EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV  302 (355)
T ss_dssp             TTCCEEE---EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC
T ss_pred             CCCcEEE---EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc
Confidence            8753322   2211127889999999999999999999999999999765322211111                     


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ........++|++|+++|++++.||.+++|++..++
T Consensus       303 ~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          303 DKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             CTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             CCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence            111223668999999999999999999999986543

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.7e-33  Score=257.52  Aligned_cols=278  Identities=13%  Similarity=0.139  Sum_probs=208.3

Q ss_pred             EcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188        121 ISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  199 (504)
Q Consensus       121 ~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  199 (504)
                      +.+++.+|++|+ ||.|++||+++++....+.       ...|.++.|+|+   +++++.|++|++|+...         
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~---------  104 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-------TPNPRTGGEHPA---IISRGPCNRLLLLYPGN---------  104 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-------EECCCTTCCCCS---EEEECSTTEEEEEETTT---------
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-------cCCceeeeeCCc---eEEecCCCeEEEEEccC---------
Confidence            345677888887 8888888887754322222       345667777777   88888888888888653         


Q ss_pred             ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEcc--CCCEEEEEcCCCeEEEEECCC
Q psy17188        200 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISA--DGTKLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       200 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~  276 (504)
                                                .+.+||+.+++.+..+. +|...|.+++|+|  ++++|++++.||+|++||+++
T Consensus       105 --------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~  158 (343)
T 3lrv_A          105 --------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED  158 (343)
T ss_dssp             --------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS
T ss_pred             --------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC
Confidence                                      45678888887666654 6888999999999  999999999999999999998


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-CCCceeeEEEC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SAPACYALAIS  355 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~~i~~~~~~  355 (504)
                      ++..              ......+...+.+++|+|++++|++|+.||.|++||+++++.. ...+.. |...|.+++|+
T Consensus       159 ~~~~--------------~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs  223 (343)
T 3lrv_A          159 DSQY--------------IVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFA  223 (343)
T ss_dssp             SCEE--------------EEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEEC
T ss_pred             CcEE--------------EEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEe
Confidence            8752              1112234556999999999999999999999999999987543 134455 88899999999


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce--EEEEEcCCCCEEEEeeC-CCcEEEeeCCCCCccee
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI--RSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIK  432 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~~~~~~  432 (504)
                      |++.  ++++++ ++.|++||++.......+....  .+...+  .+++|+|+|++|++++. |+.|++|++........
T Consensus       224 ~~g~--~l~s~~-~~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~  298 (343)
T 3lrv_A          224 DNGY--WMVVEC-DQTVVCFDLRKDVGTLAYPTYT--IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT  298 (343)
T ss_dssp             TTSS--EEEEEE-SSBEEEEETTSSTTCBSSCCCB--C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred             CCCC--EEEEEe-CCeEEEEEcCCCCcceeecccc--cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence            9998  788887 5599999998865443333221  122222  46999999999999988 99999999976544333


Q ss_pred             ecccCCCCceeEEEECC---CCCEEEEeeCCCcEEEEEcC
Q psy17188        433 AELTSSAPACYALAISP---DSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~---~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .      ..+..++|.+   +.+.+++++.||.++++-..
T Consensus       299 ~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~  332 (343)
T 3lrv_A          299 K------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT  332 (343)
T ss_dssp             E------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred             e------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence            2      4567788988   88999999999999987543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=2.1e-32  Score=253.87  Aligned_cols=287  Identities=9%  Similarity=0.094  Sum_probs=202.5

Q ss_pred             EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEE
Q psy17188        185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTG  263 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~  263 (504)
                      ||++.+.+.  ......|...|.+++|+||+++|++|+.++ +++||+.+++.......  ..+..+++.++++.+ +++
T Consensus         3 i~s~~~~~~--~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   77 (355)
T 3vu4_A            3 LGSMITRNP--IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVT   77 (355)
T ss_dssp             ------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEEC
T ss_pred             cccccccCC--ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEE
Confidence            344443332  345578999999999999999999998775 78999998877665442  257888898888777 567


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-Cccceeee
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-TPRIKAEL  342 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~  342 (504)
                      +.|++|++||..+++.                .....+...|.+++++++.  ++++ .++.|++||+.+. +.......
T Consensus        78 ~~d~~v~iWd~~~~~~----------------~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~  138 (355)
T 3vu4_A           78 GVKEVVHIWDDVKKQD----------------VSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR  138 (355)
T ss_dssp             SSTTEEEEEETTTTEE----------------EEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE
T ss_pred             CCccEEEEEECCCCcE----------------EEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc
Confidence            8889999999999874                2233456689999998864  4444 4789999999876 33222222


Q ss_pred             ccCCCceeeEEECCCCCCceeee--ccCCCeEEEEecCCCCCCCc----------cc-ccccccCCCceEEEEEcCCCCE
Q psy17188        343 TSSAPACYALAISPDSKSPFFSS--HHYKSCVKVWDISQPGSKTP----------VS-QLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~i~i~d~~~~~~~~~----------~~-~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                           ....+++++  .  +++.  ++.++.|++||+........          .. ......|...|.+++|+|+|++
T Consensus       139 -----~~~~~~~s~--~--~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~  209 (355)
T 3vu4_A          139 -----FGGVCEFSN--G--LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM  209 (355)
T ss_dssp             -----EEEEEEEET--T--EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred             -----CCceEEEEc--c--EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence                 334455666  3  3333  78999999999986531100          00 2334578899999999999999


Q ss_pred             EEEeeCCCc-EEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE--EE---------
Q psy17188        410 LIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QF---------  477 (504)
Q Consensus       410 l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~---------  477 (504)
                      |++++.|++ |++||+++++.........|...|++++|+|++++|++++.|++|++||+.++....  .+         
T Consensus       210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~  289 (355)
T 3vu4_A          210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF  289 (355)
T ss_dssp             EEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred             EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccc
Confidence            999999998 999999988765544323378899999999999999999999999999997653211  10         


Q ss_pred             -----------e-ecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        478 -----------Q-GHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       478 -----------~-~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                                 . .+......++|++|+++|++++.||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~  328 (355)
T 3vu4_A          290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM  328 (355)
T ss_dssp             CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred             ccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence                       0 11223467999999999999999984

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=9.9e-32  Score=284.02  Aligned_cols=399  Identities=10%  Similarity=0.056  Sum_probs=286.7

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-C------CeEEEEeCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-K------GCVKVWDISQ  143 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d------~~i~vw~~~~  143 (504)
                      .+.+...+||+  +.+++... +.++++.... .+.....+|...|.+++|||||++|++++ +      ..|++|++.+
T Consensus        14 ~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~g-g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~   89 (1045)
T 1k32_A           14 PNLLLNPDIHG--DRIIFVCC-DDLWEHDLKS-GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN   89 (1045)
T ss_dssp             CCCCEEEEEET--TEEEEEET-TEEEEEETTT-CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred             cceEeCcEEeC--CEEEEEEC-CcEEEEECCC-CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence            34566777774  34444443 3555555433 23333348999999999999999999775 3      3799999877


Q ss_pred             CCCCCceeeeeecCCCCce-------EEEEEccCCCEEEEecCC------CcEEEEeCCCCCccc---------------
Q psy17188        144 PGSKTPVSQLDCLQRDNYI-------RSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRI---------------  195 (504)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~---------------  195 (504)
                      +.    ..  ....|...+       .+++|+|||+++++++.+      ..|++|++.+++...               
T Consensus        90 g~----~~--~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~  163 (1045)
T 1k32_A           90 GE----IK--RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGR  163 (1045)
T ss_dssp             TE----EE--ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTE
T ss_pred             CC----eE--EcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCE
Confidence            52    22  223677777       899999999977777644      358888875543210               


Q ss_pred             --------------------------------eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeec
Q psy17188        196 --------------------------------KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQ  242 (504)
Q Consensus       196 --------------------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~  242 (504)
                                                      ...+.+|...+.++.|+++ .++++++.|+.+.+|.+.. +.....+.
T Consensus       164 l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~  242 (1045)
T 1k32_A          164 RVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT  242 (1045)
T ss_dssp             EEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred             EEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec
Confidence                                            1123456777888999988 6777778889999998653 44445565


Q ss_pred             CCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCCEEEEEe
Q psy17188        243 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGG  321 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~  321 (504)
                      .|. .+...+|+|||+.|+++ .++.|++||+...++.  .+......   .......+...+.+++|+ |+|++|++++
T Consensus       243 ~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~--~l~~~~~~---~~~~~~~~~~~v~~~~~S~pdG~~la~~~  315 (1045)
T 1k32_A          243 SFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE--KIEIGDLE---SPEDRIISIPSKFAEDFSPLDGDLIAFVS  315 (1045)
T ss_dssp             CCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE--ECCCCCCC---BCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred             CCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee--eeccCccc---ccccccccccccceeeecCCCCCEEEEEE
Confidence            555 46678999999988887 4899999999655443  21111100   011112345578999999 9999999887


Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCC-ceeeEEECCCCCCceeeeccCCCeEE-EEecCCCCCCCcccccccccCCCceE
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAP-ACYALAISPDSKSPFFSSHHYKSCVK-VWDISQPGSKTPVSQLDCLQRDNYIR  399 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~~~~~~i~  399 (504)
                       ++.+.+|+...+..   ..+..+.. .+..++|+ +++  .++..+.+..+. +||+.....    ..+.  .+...+.
T Consensus       316 -~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~s-dg~--~l~~~s~~~~l~~~~d~~~~~~----~~l~--~~~~~~~  382 (1045)
T 1k32_A          316 -RGQAFIQDVSGTYV---LKVPEPLRIRYVRRGGD-TKV--AFIHGTREGDFLGIYDYRTGKA----EKFE--ENLGNVF  382 (1045)
T ss_dssp             -TTEEEEECTTSSBE---EECSCCSCEEEEEECSS-SEE--EEEEEETTEEEEEEEETTTCCE----EECC--CCCCSEE
T ss_pred             -cCEEEEEcCCCCce---EEccCCCcceEEeeeEc-CCC--eEEEEECCCceEEEEECCCCCc----eEec--CCcccee
Confidence             78999999876532   23445555 78899999 887  455555577888 889875421    1121  4567889


Q ss_pred             EEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC----------cEEEEEcC
Q psy17188        400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG----------NIAVWDLH  469 (504)
Q Consensus       400 ~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg----------~i~iwd~~  469 (504)
                      .++|+|||++|++++.++.|++||+.+++.....  ..+...+..++|+|||++|++++.++          .|++||+.
T Consensus       383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~--~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~  460 (1045)
T 1k32_A          383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE--RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME  460 (1045)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred             eeEECCCCCEEEEECCCCeEEEEECCCCceEEec--cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence            9999999999999999999999999987654433  35667788899999999999887654          89999999


Q ss_pred             CcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        470 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       470 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      +++ +..+..|...+..++|+|||++|++++.++
T Consensus       461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~  493 (1045)
T 1k32_A          461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSYRS  493 (1045)
T ss_dssp             TTE-EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred             CCc-EEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence            887 667778888899999999999999988754

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2.9e-31  Score=250.56  Aligned_cols=279  Identities=15%  Similarity=0.251  Sum_probs=220.8

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCCCCCeEE
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC  250 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~  250 (504)
                      ..+++++.|+.|++||+.+++.  ...+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~--~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~   78 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKV--TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQG   78 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEE--EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeE--EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence            4678888999999999987653  44455554 48999999999976 667789999999999999999888555 8999


Q ss_pred             EEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEE
Q psy17188        251 IDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSI  328 (504)
Q Consensus       251 ~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v  328 (504)
                      ++|+|++++|+ +++.|+.|++||+.+++..                ........+.+++|+|+++.+ ++++.++.|++
T Consensus        79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~----------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~  142 (391)
T 1l0q_A           79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVA----------------GTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSV  142 (391)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEETTTTEEE----------------EEEECSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             eEECCCCCEEEEEECCCCEEEEEECCCCeEE----------------EEEeCCCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence            99999999775 5557799999999988742                222344568999999999987 67778999999


Q ss_pred             EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188        329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  408 (504)
Q Consensus       329 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~  408 (504)
                      ||+.+++..  ..+..+ ..+..++|+|+++. +++++..++.|++||++.....      ....+...+.+++|+|+++
T Consensus       143 ~d~~~~~~~--~~~~~~-~~~~~~~~~~dg~~-l~~~~~~~~~v~~~d~~~~~~~------~~~~~~~~~~~~~~~~~g~  212 (391)
T 1l0q_A          143 INTVTKAVI--NTVSVG-RSPKGIAVTPDGTK-VYVANFDSMSISVIDTVTNSVI------DTVKVEAAPSGIAVNPEGT  212 (391)
T ss_dssp             EETTTTEEE--EEEECC-SSEEEEEECTTSSE-EEEEETTTTEEEEEETTTTEEE------EEEECSSEEEEEEECTTSS
T ss_pred             EECCCCcEE--EEEecC-CCcceEEECCCCCE-EEEEeCCCCEEEEEECCCCeEE------EEEecCCCccceEECCCCC
Confidence            999876433  333333 36789999999984 4467888999999999765321      2223456788999999999


Q ss_pred             EEEEee---CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE-EEeeCCCcEEEEEcCCcceEEEEeecCCc
Q psy17188        409 TLIVGG---EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDG  483 (504)
Q Consensus       409 ~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~h~~~  483 (504)
                      +|++++   .++.|++||+.+++......  .+. .+.+++|+|++++| ++++.|+.|++||+.+++++..+..|..+
T Consensus       213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~  288 (391)
T 1l0q_A          213 KAYVTNVDKYFNTVSMIDTGTNKITARIP--VGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP  288 (391)
T ss_dssp             EEEEEEECSSCCEEEEEETTTTEEEEEEE--CCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred             EEEEEecCcCCCcEEEEECCCCeEEEEEe--cCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence            999888   68999999999775544333  333 47889999999988 56688999999999999999988877654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=7e-33  Score=260.87  Aligned_cols=274  Identities=9%  Similarity=0.026  Sum_probs=183.4

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc---eeeeecCcCceEEEEECC--------CCCEEEEEeCCCcEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI---KAELTSSAPACYALAISP--------DSKVCFSCCSDGNIA  228 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~  228 (504)
                      .......+++++++|++++.|++|+|||.+.++...   ...+.+|...|.+++|+|        |+++|++++.|++|+
T Consensus        90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~  169 (393)
T 4gq1_A           90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI  169 (393)
T ss_dssp             -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred             CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence            334444555677889999999999999998765432   234678999999999997        788999999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCC----------CCcccce
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK----------TPVSQLD  297 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~----------~~~~~~~  297 (504)
                      |||+.++..+..+..|...|.+++|+|++ ++|++++.|++|++||+++++............          .......
T Consensus       170 ~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  249 (393)
T 4gq1_A          170 IWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH  249 (393)
T ss_dssp             EEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred             EEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence            99999998888888899999999999987 489999999999999999876422111100000          0001122


Q ss_pred             ecccCCceEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188        298 CLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       298 ~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      ...+...+.++.|+ ++++.|++++.|+.+++||+....  ....+..+...+..+.+.|+.+.  ..            
T Consensus       250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~--~~~~l~~~~~~~~~~~~~~~~~~--~~------------  313 (393)
T 4gq1_A          250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN--DYNEISDSTMKLGPKNLLPNVQG--IS------------  313 (393)
T ss_dssp             --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEE--EC------------
T ss_pred             cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC--CCceEeeecCccccEEEcccccc--cc------------
Confidence            23567788899987 799999999999999999998763  23334444445555555554321  10            


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC  454 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l  454 (504)
                                       .........++|  ++.++++|+.||.|++||+.+++....  ...|...|++++|+|||++|
T Consensus       314 -----------------~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~--~~~~~~~V~svafspdG~~L  374 (393)
T 4gq1_A          314 -----------------LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI--PIQLGMPIVDFCWHQDGSHL  374 (393)
T ss_dssp             -----------------SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE--EEECSSCEEEEEECTTSSEE
T ss_pred             -----------------ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE--ecCCCCcEEEEEEcCCCCEE
Confidence                             011111233443  455677888999999999998765443  34566789999999999999


Q ss_pred             EEeeCCCcEEEEEcC
Q psy17188        455 FSCCSDGNIAVWDLH  469 (504)
Q Consensus       455 ~s~~~dg~i~iwd~~  469 (504)
                      |+++.+| +.+|++.
T Consensus       375 A~as~~G-v~lvrL~  388 (393)
T 4gq1_A          375 AIATEGS-VLLTRLM  388 (393)
T ss_dssp             EEEESSE-EEEEEEG
T ss_pred             EEEeCCC-eEEEEEe
Confidence            9998877 6666653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=1.1e-30  Score=254.47  Aligned_cols=334  Identities=12%  Similarity=0.123  Sum_probs=247.2

Q ss_pred             EEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC--CCCCccce
Q psy17188        120 TISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL--ASPTPRIK  196 (504)
Q Consensus       120 ~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~--~~~~~~~~  196 (504)
                      +++|++++++++. |++|.+||..+++.   +..+.. ++.  +.+++|+||+++|++++.|+.|.+||+  .+.+  ..
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~---~~~i~~-g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--~~  215 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKI---VKVIDT-GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--KV  215 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCE---EEEEEC-STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--EE
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceE---EEEEec-Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc--EE
Confidence            4889999888888 99999999987643   233221 232  889999999999999999999999999  5543  34


Q ss_pred             eeeecCcCceEEEEECC----CCCEEEEEeC-CCcEEEEECCCCeEEEeecCC-----------CCCeEEEEEccCCC-E
Q psy17188        197 AELTSSAPACYALAISP----DSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGH-----------TDGASCIDISADGT-K  259 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~~-~  259 (504)
                      ..+. +...+..++|+|    |+++|++++. +++|.+||..+++++.++..+           ...+..+.++|++. +
T Consensus       216 ~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~  294 (543)
T 1nir_A          216 AEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF  294 (543)
T ss_dssp             EEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred             EEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence            4454 345579999999    9999998884 899999999999998887642           23788999999765 5


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccc
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRI  338 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~  338 (504)
                      +++...++.|.+||+.+.+..              ......+...+..+.|+|+|+++++++ .+++|.+||..+++...
T Consensus       295 ~vs~~~~g~i~vvd~~~~~~l--------------~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~  360 (543)
T 1nir_A          295 IVNVKETGKVLLVNYKDIDNL--------------TVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA  360 (543)
T ss_dssp             EEEETTTTEEEEEECTTSSSC--------------EEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EEEECCCCeEEEEEecCCCcc--------------eeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence            667788999999999876421              111223455678899999999877654 58899999999875433


Q ss_pred             eeeecc--CCCceeeEEECCCCCCceeeecc-CCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        339 KAELTS--SAPACYALAISPDSKSPFFSSHH-YKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       339 ~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ......  |......+ ++|++.. +++++. .+++|.+||......    .+.+..+  ..+...+..++++|++++|+
T Consensus       361 ~i~~g~~ph~g~g~~~-~~p~~g~-~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l--~~~g~~~~~v~~~pdg~~l~  436 (543)
T 1nir_A          361 LVDVGKTPHPGRGANF-VHPKYGP-VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL--QGQGGGSLFIKTHPKSSHLY  436 (543)
T ss_dssp             EEECSSSBCCTTCEEE-EETTTEE-EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE--ECSCSCCCCEECCTTCCEEE
T ss_pred             eeccCCCCCCCCCccc-CCCCCcc-EEEeccCCCceEEEEEeCCCCCchhcCeEEEEE--EcCCCCceEEEcCCCCCcEE
Confidence            332211  33222232 4677554 566654 689999999987322    1222222  23456677899999999999


Q ss_pred             Eee-------CCCcEEEeeCCCCCcc-eeec------ccCCCCceeEEEECCCCCEEEEee-----CCCcEEEEEcCCcc
Q psy17188        412 VGG-------EASNLSIWDLASPTPR-IKAE------LTSSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQT  472 (504)
Q Consensus       412 ~~~-------~dg~i~iwd~~~~~~~-~~~~------~~~~~~~v~~l~~s~~~~~l~s~~-----~dg~i~iwd~~~~~  472 (504)
                      +++       .+++|.+||+.+.+.. ....      +..+...+..++|+|||+.|+++.     .|+.|.|||.++++
T Consensus       437 v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~  516 (543)
T 1nir_A          437 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  516 (543)
T ss_dssp             ECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             EecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence            987       2679999999988765 2221      234567899999999999998763     47999999999999


Q ss_pred             eEEEEeec
Q psy17188        473 LVRQFQGH  480 (504)
Q Consensus       473 ~~~~~~~h  480 (504)
                      ++.+++.+
T Consensus       517 ~~~~i~~~  524 (543)
T 1nir_A          517 LKAVVKDP  524 (543)
T ss_dssp             EEEEECCT
T ss_pred             EEEeecCC
Confidence            99998854

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-32  Score=249.98  Aligned_cols=274  Identities=14%  Similarity=0.146  Sum_probs=203.7

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCC
Q psy17188        210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGS  289 (504)
Q Consensus       210 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~  289 (504)
                      .+.+++.+|++|+.||.|++||+.+++.+..+.  ...|.++.|+|+   +++++.|++|++|+... ...+|+......
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~-~~~~~~~~~~~~  116 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN-QITILDSKTNKV  116 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-EEEEEETTTCCE
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-ceEEeecCCcce
Confidence            344578899999999999999999998888776  567888888887   99999999999999874 334444332210


Q ss_pred             CCCcccceecccCCceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        290 KTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       290 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                         + ......+...|.+++|+|  +++++++++.|+.|++||+++++.. ......+...+.+++|+|++.  ++++++
T Consensus       117 ---~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~~i~~~~~~pdg~--~lasg~  189 (343)
T 3lrv_A          117 ---L-REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY-IVHSAKSDVEYSSGVLHKDSL--LLALYS  189 (343)
T ss_dssp             ---E-EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-EEECCCSSCCCCEEEECTTSC--EEEEEC
T ss_pred             ---e-EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-EEEecCCCCceEEEEECCCCC--EEEEEc
Confidence               0 122234567899999999  9999999999999999999987542 222234555799999999998  899999


Q ss_pred             CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCce--eE
Q psy17188        368 YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPAC--YA  444 (504)
Q Consensus       368 ~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v--~~  444 (504)
                      .|+.|++||++......  ..+. ..|...|.+++|+|++.+|++++ ++.|++||+++.+...... +..+...+  .+
T Consensus       190 ~dg~i~iwd~~~~~~~~--~~~~-~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  265 (343)
T 3lrv_A          190 PDGILDVYNLSSPDQAS--SRFP-VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT  265 (343)
T ss_dssp             TTSCEEEEESSCTTSCC--EECC-CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred             CCCEEEEEECCCCCCCc--cEEe-ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence            99999999998764331  1111 13788999999999999999999 4599999999876543222 12233333  36


Q ss_pred             EEECCCCCEEEEeeC-CCcEEEEEcCCcceEEEEeecCCceEEEEEcc---CCCEEEEecCCCC
Q psy17188        445 LAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA---DGTKLWTGGLDNT  504 (504)
Q Consensus       445 l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~---d~~~l~s~s~Dgt  504 (504)
                      ++|+|++++|++++. |+.|+||++.+.......    .++..+.|.+   +.+.|++++.||+
T Consensus       266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~  325 (343)
T 3lrv_A          266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG  325 (343)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE
T ss_pred             EEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc
Confidence            899999999999998 999999999766543332    4566777777   7778888777763

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.98  E-value=9.3e-30  Score=268.99  Aligned_cols=345  Identities=12%  Similarity=0.074  Sum_probs=256.5

Q ss_pred             CCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC------CcEEE
Q psy17188        112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSI  185 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i  185 (504)
                      +.+.+...+||+  +.|+..+++.|.+|+++++.    ..  ....|...+.+++|||||++||+++.+      ..|++
T Consensus        13 ~~~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~----~~--~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~   84 (1045)
T 1k32_A           13 MPNLLLNPDIHG--DRIIFVCCDDLWEHDLKSGS----TR--KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYF   84 (1045)
T ss_dssp             CCCCCEEEEEET--TEEEEEETTEEEEEETTTCC----EE--EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEE
T ss_pred             ccceEeCcEEeC--CEEEEEECCcEEEEECCCCc----EE--EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEE
Confidence            456788999995  57887777899999997753    12  223688999999999999999988543      47999


Q ss_pred             EeCCCCCccceeeeecCcCce-------EEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEE-------------
Q psy17188        186 WDLASPTPRIKAELTSSAPAC-------YALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVR-------------  239 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~-------------  239 (504)
                      |++.+++   ...+..|...+       ..++|+|||+++++++.+      ..|++|++.+++...             
T Consensus        85 ~d~~~g~---~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp  161 (1045)
T 1k32_A           85 YNGENGE---IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD  161 (1045)
T ss_dssp             EETTTTE---EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET
T ss_pred             EECCCCC---eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC
Confidence            9998765   45567787777       899999999977777644      358888876665332             


Q ss_pred             ------------------------------------eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC--CceEE
Q psy17188        240 ------------------------------------QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE--GCVKV  281 (504)
Q Consensus       240 ------------------------------------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~--~~~~~  281 (504)
                                                          .+.+|...+.++.|+++ .++++++.|+.+.+|.+..  +..  
T Consensus       162 G~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~--  238 (1045)
T 1k32_A          162 GRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL--  238 (1045)
T ss_dssp             TEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC--
T ss_pred             CEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc--
Confidence                                                12345666777777776 5566667777777776542  221  


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-----------CCCcee
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-----------SAPACY  350 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------~~~~i~  350 (504)
                                     ........+...+|+|+|+.|+++ .++.|.+||+....   ...+..           +...+.
T Consensus       239 ---------------~~l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~  299 (1045)
T 1k32_A          239 ---------------RKHTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKF  299 (1045)
T ss_dssp             ---------------EECCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGG
T ss_pred             ---------------eEecCCCCcceeeEcCCCCEEEEE-eCCEEEEecCCceE---eeeeccCcccccccccccccccc
Confidence                           111112235677999999988887 48899999984322   112222           234689


Q ss_pred             eEEEC-CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC-ceEEEEEcCCCCEEEEeeCCCcEE-EeeCCCC
Q psy17188        351 ALAIS-PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLIVGGEASNLS-IWDLASP  427 (504)
Q Consensus       351 ~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~~~~~dg~i~-iwd~~~~  427 (504)
                      .++|+ |+++.  ++.++ ++.+.+|+.......      ....+.. .+..++|+ ||+.|++++.++.+. +|++.++
T Consensus       300 ~~~~S~pdG~~--la~~~-~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~  369 (1045)
T 1k32_A          300 AEDFSPLDGDL--IAFVS-RGQAFIQDVSGTYVL------KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG  369 (1045)
T ss_dssp             EEEEEECGGGC--EEEEE-TTEEEEECTTSSBEE------ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred             eeeecCCCCCE--EEEEE-cCEEEEEcCCCCceE------EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence            99999 99985  44443 789999998754211      1223445 78899999 999999998888888 9999876


Q ss_pred             CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188        428 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       428 ~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      +...   +..+...+..++|+|||++|++++.++.|++||+.+++....+.+|...+.+++|+|||++|++++.+
T Consensus       370 ~~~~---l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~  441 (1045)
T 1k32_A          370 KAEK---FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL  441 (1045)
T ss_dssp             CEEE---CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred             CceE---ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence            5332   22566789999999999999999999999999999999888887899999999999999999988764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.98  E-value=1.4e-30  Score=246.35  Aligned_cols=302  Identities=14%  Similarity=0.097  Sum_probs=229.6

Q ss_pred             CceEEEEEccCCC-EEEEec----CCC----cEEEEeC--CCCCccceeeeecCcCceEEEEECC--------------C
Q psy17188        160 NYIRSVKLLPDGR-TLIVGG----EAS----NLSIWDL--ASPTPRIKAELTSSAPACYALAISP--------------D  214 (504)
Q Consensus       160 ~~v~~~~~s~~~~-~l~~~~----~dg----~i~iw~~--~~~~~~~~~~~~~~~~~v~~~~~s~--------------~  214 (504)
                      ..+....|.+.+. ++++|+    .+|    .|++||+  .+++......+.+|...+..+++++              .
T Consensus        63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~  142 (415)
T 2hqs_A           63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF  142 (415)
T ss_dssp             GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred             cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence            4567778888765 555765    467    8999999  8776544466788888777777664              1


Q ss_pred             CCEEEEEeCC------CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeec
Q psy17188        215 SKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       215 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~  285 (504)
                      +..++.++.+      +.|++||++. .....+..|...+.+++|+|||++|++++.|+   .|++||+.+++..     
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-----  216 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-----  216 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-----
Confidence            5566666554      7999999974 44667777999999999999999999999885   9999999988742     


Q ss_pred             CCCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        286 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                                 ....+...+.+++|+|+|+.|+ +++.++.  |++||+.+++.   ..+..+...+..++|+|+++.  
T Consensus       217 -----------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~--  280 (415)
T 2hqs_A          217 -----------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQN--  280 (415)
T ss_dssp             -----------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSE--
T ss_pred             -----------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCE--
Confidence                       2334556789999999999888 5555554  99999987643   455566778999999999984  


Q ss_pred             eeeccC-CC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCCCcceeeccc
Q psy17188        363 FSSHHY-KS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       363 ~~~~~~-~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~  436 (504)
                      ++.++. ++  .|.+||+......      ....+...+..++|+|||++|++++.+   ..|++||+.+++...   +.
T Consensus       281 l~~~s~~~g~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~---l~  351 (415)
T 2hqs_A          281 LAFTSDQAGRPQVYKVNINGGAPQ------RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV---LS  351 (415)
T ss_dssp             EEEEECTTSSCEEEEEETTSSCCE------ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE---CC
T ss_pred             EEEEECCCCCcEEEEEECCCCCEE------EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE---ec
Confidence            444333 44  6777787764321      112345678899999999999988764   579999999876532   23


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCC---cEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      .+. .+..++|+|||++|++++.++   .|++||+. ++....+..|.+.|.+++|+|...
T Consensus       352 ~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          352 STF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             CSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred             CCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence            333 788999999999999988877   79999987 556778889999999999999654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=2.8e-29  Score=221.56  Aligned_cols=297  Identities=12%  Similarity=0.041  Sum_probs=184.3

Q ss_pred             EEEEEEcCCCc---EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-C---CcEEEEeC
Q psy17188        116 VCAVTISNPTK---YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A---SNLSIWDL  188 (504)
Q Consensus       116 V~~v~~s~~~~---~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d---g~i~iw~~  188 (504)
                      ++++-|-..+-   .+++++...|++|+...+..-..+..  ...|+.+|..+.+.||..-|++..- +   +.|+..-+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~  119 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYT--WHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC  119 (356)
T ss_dssp             EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEE--EECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred             EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEE--EeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence            45555554332   67778899999999987522233333  3468888999999986543333211 1   11211111


Q ss_pred             CCC--CccceeeeecCcCceEEEEECCCCCEEEEEe--CCCcEEEEEC-CCCeEEEeecCCCCCeEEEEEcc---CCCEE
Q psy17188        189 ASP--TPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDL-HNQTLVRQFQGHTDGASCIDISA---DGTKL  260 (504)
Q Consensus       189 ~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~h~~~v~~~~~~~---~~~~l  260 (504)
                      ...  .......-.+|...|..+   ++++++.+++  .|+.|++|++ .+++.+..+.+|...++.++|++   ++.+|
T Consensus       120 spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L  196 (356)
T 2w18_A          120 SSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL  196 (356)
T ss_dssp             ------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred             CCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence            111  111122223444445443   5666666543  5999999999 55888888889999999999999   77999


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      ++++.|++|++||+++++...             .+.. ..+...+.+++|+|+|.++++++.+..  +|          
T Consensus       197 aSgS~D~TIkIWDl~TGk~l~-------------tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w----------  251 (356)
T 2w18_A          197 LGTTIMNNIVIWNLKTGQLLK-------------KMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE----------  251 (356)
T ss_dssp             EEEETTSEEEEEETTTCCEEE-------------EEECCC---CCCEEEEEEETTEEEEEEC------------------
T ss_pred             EEecCCCcEEEEECCCCcEEE-------------EEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc----------
Confidence            999999999999999997421             1110 012245778899999998877664322  12          


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                                            .+++++.|+++++||..++.............|...+.+..++  +.++++++.|++|
T Consensus       252 ----------------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTI  307 (356)
T 2w18_A          252 ----------------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTI  307 (356)
T ss_dssp             ----------------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCE
T ss_pred             ----------------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcE
Confidence                                  2556666777777776654221110000011233333333333  7789999999999


Q ss_pred             EEeeCCCCCcceeecccCCCCcee-EEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      +|||+.+++.+.  .+.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus       308 kIWDl~tGk~l~--tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          308 AIWDLLLGQCTA--LLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEEETTTCSEEE--EECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EEEECCCCcEEE--EecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            999999886544  4556655544 5899999999999999999999995

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.97  E-value=2.4e-29  Score=257.46  Aligned_cols=331  Identities=14%  Similarity=0.111  Sum_probs=232.6

Q ss_pred             CCceEEEEEccCCCEEEEecC-CC-----cEEEEeCCCCCccceeeeecCc----------------------CceEEEE
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGE-AS-----NLSIWDLASPTPRIKAELTSSA----------------------PACYALA  210 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~----------------------~~v~~~~  210 (504)
                      ...+.+++|+|||++|++++. |+     .|++||+.+++.........+.                      ..+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            456899999999999999988 88     8999999987643332222222                      2378899


Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCC
Q psy17188        211 ISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPG  288 (504)
Q Consensus       211 ~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~  288 (504)
                      |+|||++|++++. +.|++||+.++.  ....+..|...+.+++|+|||++|++++ ++.|++||+.+++........  
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~--  191 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG--  191 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC--
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC--
Confidence            9999999999886 899999999873  4456677888999999999999999887 569999999988753211100  


Q ss_pred             CCCCcc---cceecccCCceEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEeCC
Q psy17188        289 SKTPVS---QLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---------------------------------NLSIWDLA  332 (504)
Q Consensus       289 ~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~v~d~~  332 (504)
                      ......   ..........+..++|+|||++|++++.|+                                 .|.+||+.
T Consensus       192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~  271 (741)
T 2ecf_A          192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA  271 (741)
T ss_dssp             CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred             ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence            000000   000000012257899999999999987665                                 78899998


Q ss_pred             C-CCccceeeeccCCCceeeEEECCCCCCceeeec---cCCCeEEEEecCCCCCCCcccccccccCCC---ceEEEEEcC
Q psy17188        333 S-PTPRIKAELTSSAPACYALAISPDSKSPFFSSH---HYKSCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLP  405 (504)
Q Consensus       333 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~---~i~~~~~s~  405 (504)
                      + ++.........+...+..++| ||++.+++...   ..+..|.+||+.++........    ....   .+..++|+|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----~~~~~~~~~~~~~~sp  346 (741)
T 2ecf_A          272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE----TSPTWVPLHNSLRFLD  346 (741)
T ss_dssp             TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE----ECSSCCCCCSCCEECT
T ss_pred             CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc----CCCCcCCcCCceEECC
Confidence            7 653322222246678899999 99995333332   2467899999887543221111    1111   345889999


Q ss_pred             CCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEE-EECCCCCEEEE-eeCCC--cEEEEEcCC-cceEEEEeec
Q psy17188        406 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL-AISPDSKVCFS-CCSDG--NIAVWDLHN-QTLVRQFQGH  480 (504)
Q Consensus       406 ~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~s-~~~dg--~i~iwd~~~-~~~~~~~~~h  480 (504)
                      ||+++++++.+|.++||.++....  ...+..+...+..+ .|+||++.|+. ++.++  .++||++.. ++....+.. 
T Consensus       347 dg~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-  423 (741)
T 2ecf_A          347 DGSILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-  423 (741)
T ss_dssp             TSCEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-
T ss_pred             CCeEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-
Confidence            999999999999888887653222  34455566677777 59999998764 44555  899999864 555666665 


Q ss_pred             CCceEEEEEccCCCEEEEecC
Q psy17188        481 TDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       481 ~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ...+..++|+|||++|+....
T Consensus       424 ~~~~~~~~~spdg~~l~~~~~  444 (741)
T 2ecf_A          424 APGMHSASFARNASVYVDSWS  444 (741)
T ss_dssp             SCSEEEEEECTTSSEEEEEEE
T ss_pred             CCCceEEEECCCCCEEEEEec
Confidence            667899999999999887643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=6.5e-29  Score=219.19  Aligned_cols=281  Identities=11%  Similarity=0.061  Sum_probs=191.3

Q ss_pred             eEEEEEccCCC---EEEEecCCCcEEEEeCCCC-CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy17188        162 IRSVKLLPDGR---TLIVGGEASNLSIWDLASP-TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       162 v~~~~~s~~~~---~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~  237 (504)
                      +.++.|-..+-   .+++++ ...|++|+..+. +.+....+..|+.+|..+.+.||..-|++..-              
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------------  106 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL--------------  106 (356)
T ss_dssp             EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--------------
T ss_pred             EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee--------------
Confidence            44555544332   566666 478999999875 23567888999999999999998654443221              


Q ss_pred             EEeecCCCCCeEEEEEccC----CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        238 VRQFQGHTDGASCIDISAD----GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~----~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                         =+-+...|..++++||    +..+++++.+  +.+|++.+++                                   
T Consensus       107 ---~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~-----------------------------------  146 (356)
T 2w18_A          107 ---GNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRR-----------------------------------  146 (356)
T ss_dssp             ---CSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTE-----------------------------------
T ss_pred             ---ccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCc-----------------------------------
Confidence               1125567899999999    8899998744  7777765443                                   


Q ss_pred             CCEEEEEe--CCCcEEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188        314 GRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD  390 (504)
Q Consensus       314 ~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~  390 (504)
                        .+.++.  .|+.|++|++... .........|...+..++|++ ++...++++++.|++|++||+++++....+..  
T Consensus       147 --lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g--  221 (356)
T 2w18_A          147 --LVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI--  221 (356)
T ss_dssp             --EEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred             --EEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC--
Confidence              233322  4666666666331 133344556677888889988 44444999999999999999988654333321  


Q ss_pred             cccCCCceEEEEEcCCCCEE------------EEeeCCCcEEEeeCCCCCcceeec---ccCCCCceeEEEECCCCCEEE
Q psy17188        391 CLQRDNYIRSVKLLPDGRTL------------IVGGEASNLSIWDLASPTPRIKAE---LTSSAPACYALAISPDSKVCF  455 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~~l------------~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~l~~s~~~~~l~  455 (504)
                      ...+...+.+++|+|+|+++            ++|+.|++|++||..+++......   ..+|...+.+..+  ++.+++
T Consensus       222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lA  299 (356)
T 2w18_A          222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAA  299 (356)
T ss_dssp             CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEE
T ss_pred             CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEE
Confidence            11123467788999999887            567789999999999876543332   1344444433333  478999


Q ss_pred             EeeCCCcEEEEEcCCcceEEEEeecCCceE-EEEEccCCCEEEEecCCCC
Q psy17188        456 SCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       456 s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +++.|++|+|||+.+++++.++.+|...+. .++|+|||++|++|+.|+|
T Consensus       300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T  349 (356)
T 2w18_A          300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN  349 (356)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred             EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence            999999999999999999999999988665 5899999999999999997

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=2.8e-28  Score=237.53  Aligned_cols=323  Identities=13%  Similarity=0.098  Sum_probs=235.4

Q ss_pred             EEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEeecC
Q psy17188        166 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HNQTLVRQFQG  243 (504)
Q Consensus       166 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~  243 (504)
                      .|+|++.++++++.|++|.+||..+++.  ...+..+.. +..++|+||+++|++++.|+.|.+||+  .+++.+.++. 
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~--~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-  219 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKI--VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-  219 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCE--EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceE--EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence            3789999999999999999999987764  444442322 889999999999999999999999999  8899998888 


Q ss_pred             CCCCeEEEEEcc----CCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-E
Q psy17188        244 HTDGASCIDISA----DGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-L  317 (504)
Q Consensus       244 h~~~v~~~~~~~----~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l  317 (504)
                      +...+..++|+|    ||++|++++. +++|.+||..++++... +...+..  . ..........+..+.++|++.. +
T Consensus       220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~-i~~~g~~--~-~~~~~~~~~~v~~i~~s~~~~~~~  295 (543)
T 1nir_A          220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI-VSTRGMT--V-DTQTYHPEPRVAAIIASHEHPEFI  295 (543)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE-EECCEEC--S-SSCCEESCCCEEEEEECSSSSEEE
T ss_pred             cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccccee-ecccCcc--c-CccccccCCceEEEEECCCCCEEE
Confidence            556789999999    9999998885 89999999998874321 1000000  0 0000012336889999997765 4


Q ss_pred             EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        318 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       318 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      ++...++.|.+||..+.+......+. +...+..+.|+|+++. +++++..++.|.+||..+++....+.. ....|...
T Consensus       296 vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~-l~va~~~~~~v~v~D~~tg~l~~~i~~-g~~ph~g~  372 (543)
T 1nir_A          296 VNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRY-FMTAANNSNKVAVIDSKDRRLSALVDV-GKTPHPGR  372 (543)
T ss_dssp             EEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCE-EEEEEGGGTEEEEEETTTTEEEEEEEC-SSSBCCTT
T ss_pred             EEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCE-EEEEecCCCeEEEEECCCCeEEEeecc-CCCCCCCC
Confidence            55677899999999876543322333 4557889999999985 455666789999999987643222211 11224333


Q ss_pred             eEEEEEcCC-CCEEEEee-CCCcEEEeeCCCCC-----cceeecccCCCCceeEEEECCCCCEEEEee-------CCCcE
Q psy17188        398 IRSVKLLPD-GRTLIVGG-EASNLSIWDLASPT-----PRIKAELTSSAPACYALAISPDSKVCFSCC-------SDGNI  463 (504)
Q Consensus       398 i~~~~~s~~-g~~l~~~~-~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-------~dg~i  463 (504)
                      ...+ ++|+ +..++++. .|++|.+||+.+..     ...+..+..+...+..++++||+++|++++       .+++|
T Consensus       373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v  451 (543)
T 1nir_A          373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV  451 (543)
T ss_dssp             CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred             Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence            3333 4677 66666664 57999999998721     234455556666677889999999999987       26799


Q ss_pred             EEEEcCCcceE-EEE--------eecCCceEEEEEccCCCEEEEec
Q psy17188        464 AVWDLHNQTLV-RQF--------QGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       464 ~iwd~~~~~~~-~~~--------~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      .+||+.+++.. ..+        ..+...+..++|+|||+.|+++.
T Consensus       452 ~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~  497 (543)
T 1nir_A          452 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV  497 (543)
T ss_dssp             EEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred             EEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence            99999999877 443        34567899999999999999763

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.97  E-value=2.5e-28  Score=249.90  Aligned_cols=330  Identities=16%  Similarity=0.144  Sum_probs=235.2

Q ss_pred             CCcEEEEEEcCCCcEEEEec--CC-----eEEEEeCCCCCCCCceeeeeecCCC----------------------CceE
Q psy17188        113 GEVVCAVTISNPTKYVYTGG--KG-----CVKVWDISQPGSKTPVSQLDCLQRD----------------------NYIR  163 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~--d~-----~i~vw~~~~~~~~~~~~~~~~~~~~----------------------~~v~  163 (504)
                      ...|.+++|||||++|++++  |+     .|++||+++++..   .......+.                      ..|.
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  112 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR---LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV  112 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE---EEECGGGTC--------------------CCEESC
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee---EccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence            45689999999999998776  67     8999999876422   122111122                      3478


Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  243 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  243 (504)
                      +++|+|||++|++++. +.|++||+.+++......+..+...+..++|+|||++|++++ ++.|++||+.+++.......
T Consensus       113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~  190 (741)
T 2ecf_A          113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD  190 (741)
T ss_dssp             CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred             eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence            9999999999999886 999999998762001344666777899999999999999887 46899999999887766554


Q ss_pred             CCCC----------------eEEEEEccCCCEEEEEcCCC---------------------------------eEEEEEC
Q psy17188        244 HTDG----------------ASCIDISADGTKLWTGGLDN---------------------------------TVRSWDL  274 (504)
Q Consensus       244 h~~~----------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~~wd~  274 (504)
                      +...                +.+++|+|||++|++++.|+                                 .|++||+
T Consensus       191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~  270 (741)
T 2ecf_A          191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP  270 (741)
T ss_dssp             CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred             CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence            4432                47899999999999988765                                 7888888


Q ss_pred             CC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCccceeeeccCC--
Q psy17188        275 RE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLASPTPRIKAELTSSA--  346 (504)
Q Consensus       275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~~~~~~~~~~~~~--  346 (504)
                      .+ ++.....             ....+...+..++| |||++|+++..     +..|++||+.+++...........  
T Consensus       271 ~~~~~~~~~~-------------~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~  336 (741)
T 2ecf_A          271 AEQAQTQWID-------------LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV  336 (741)
T ss_dssp             STTCCCEEEC-------------CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred             CCCCceEEec-------------CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence            87 6642110             00135677899999 99999997753     567999999887544333222111  


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEE-EEcCCCCEEEE-eeCCC--cEEEe
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV-KLLPDGRTLIV-GGEAS--NLSIW  422 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~~-~~~dg--~i~iw  422 (504)
                      ..+..++|+||++  +++++..++.+++|.++....   ..  ....+...+..+ .|+|+|+.|+. ++.++  .+++|
T Consensus       337 ~~~~~~~~spdg~--~~~~~~~~g~~~l~~~~~~~~---~~--~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~  409 (741)
T 2ecf_A          337 PLHNSLRFLDDGS--ILWSSERTGFQHLYRIDSKGK---AA--ALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIY  409 (741)
T ss_dssp             CCCSCCEECTTSC--EEEEECTTSSCEEEEECSSSC---EE--ESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred             CcCCceEECCCCe--EEEEecCCCccEEEEEcCCCC---ee--eeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence            1456899999998  777778888888887763322   11  122345667777 59999997765 44455  89999


Q ss_pred             eCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCC----CcEEEEEcCCc
Q psy17188        423 DLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQ  471 (504)
Q Consensus       423 d~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~  471 (504)
                      ++.. +.....  +.. ...+..++|+||+++|+....+    ..+++|+...+
T Consensus       410 ~~~~~g~~~~~--l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          410 AVPLQGGQPQR--LSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             EEETTCCCCEE--CCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred             EEEcCCCCeee--ccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence            8864 322222  222 4457889999999998866543    46888887543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.97  E-value=7.3e-29  Score=253.24  Aligned_cols=339  Identities=14%  Similarity=0.131  Sum_probs=226.1

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCC---ceEEEEEccCCCEEEEecCC---------Cc
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN---YIRSVKLLPDGRTLIVGGEA---------SN  182 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~d---------g~  182 (504)
                      .+.+++|+|||++++++.|++|++||+.+++...   .+.  .|..   .|.+++|||||++|++++.+         +.
T Consensus        18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~---~~~--~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~   92 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTV---LIE--GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY   92 (723)
T ss_dssp             CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEE---EEC--TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred             cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEE---Eec--cccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence            4577899999998887569999999998864322   111  3333   49999999999999998764         77


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe--------------
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA--------------  248 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v--------------  248 (504)
                      |++||+.+++.........|...+..++|+|||+.|++++. +.|++||+.+++.......+...+              
T Consensus        93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~  171 (723)
T 1xfd_A           93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI  171 (723)
T ss_dssp             EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred             EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence            88999998765333333345555888999999999999876 799999999988776666544433              


Q ss_pred             ----EEEEEccCCCEEEEEcCCC----------------------------------eEEEEECCCCce-EEEeecCCCC
Q psy17188        249 ----SCIDISADGTKLWTGGLDN----------------------------------TVRSWDLREGCV-KVWDISQPGS  289 (504)
Q Consensus       249 ----~~~~~~~~~~~l~s~~~dg----------------------------------~i~~wd~~~~~~-~~~~~~~~~~  289 (504)
                          .+++|+|||+.|++++.|+                                  .|++||+.+++. ....  .   
T Consensus       172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~--~---  246 (723)
T 1xfd_A          172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM--P---  246 (723)
T ss_dssp             SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC--C---
T ss_pred             ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee--C---
Confidence                7899999999999887553                                  677777766652 1100  0   


Q ss_pred             CCCcccceecccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCccceeeeccCCCce----eeEEECCCCCCc
Q psy17188        290 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPAC----YALAISPDSKSP  361 (504)
Q Consensus       290 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~  361 (504)
                           ......+...+..++|+|||+++++...    +..|++||+.+++....... .+...+    ..++|+||++.+
T Consensus       247 -----~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l  320 (723)
T 1xfd_A          247 -----PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSKDGRKF  320 (723)
T ss_dssp             -----CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECTTSCSE
T ss_pred             -----CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcCCCCeE
Confidence                 0001123567899999999998877643    35799999988754333222 122222    378999999975


Q ss_pred             eeeeccCCC------eEEEEecCCCCC---CCcccccccccCCCceEE-EEEcCCCCEEEEeeCC---CcEEEeeCCCCC
Q psy17188        362 FFSSHHYKS------CVKVWDISQPGS---KTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEA---SNLSIWDLASPT  428 (504)
Q Consensus       362 ~~~~~~~~~------~i~i~d~~~~~~---~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~d---g~i~iwd~~~~~  428 (504)
                      ++++...++      .|.+||......   ...+.     .....+.. ++|+|||+.|+..+.+   +.+++|++....
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-----~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~  395 (723)
T 1xfd_A          321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-----SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG  395 (723)
T ss_dssp             EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-----CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred             EEEEecccCCCcceeEEEEEeccCCCCccceeEee-----cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence            555466666      466666322222   22111     12233444 6999999999866555   789999986533


Q ss_pred             cceeecccC---CCCceeEEEECCCCCEEEEeeCC-C--cEEEEEcCCcceEE
Q psy17188        429 PRIKAELTS---SAPACYALAISPDSKVCFSCCSD-G--NIAVWDLHNQTLVR  475 (504)
Q Consensus       429 ~~~~~~~~~---~~~~v~~l~~s~~~~~l~s~~~d-g--~i~iwd~~~~~~~~  475 (504)
                      ......+..   +...+..++|+||+++|+..... .  ...+++..+++.+.
T Consensus       396 ~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~~~  448 (723)
T 1xfd_A          396 NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMF  448 (723)
T ss_dssp             TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEE
T ss_pred             CCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCEEE
Confidence            211122222   45567889999999988865432 2  23445555554433

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=1.1e-27  Score=226.58  Aligned_cols=301  Identities=16%  Similarity=0.146  Sum_probs=224.2

Q ss_pred             CcEEEEEEcCCC-cEEEEec-----CC----eEEEEeC--CCCCCCCceeeeeecCCCCceEEEEEcc------------
Q psy17188        114 EVVCAVTISNPT-KYVYTGG-----KG----CVKVWDI--SQPGSKTPVSQLDCLQRDNYIRSVKLLP------------  169 (504)
Q Consensus       114 ~~V~~v~~s~~~-~~l~~~~-----d~----~i~vw~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~------------  169 (504)
                      ..+...+|++.+ +++++|+     ||    .|+|||+  .+++   .+......+|...+..+++++            
T Consensus        63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~  139 (415)
T 2hqs_A           63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT---VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK  139 (415)
T ss_dssp             GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC---EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC---EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence            456667777766 4565654     57    8999999  7653   332333446777777777765            


Q ss_pred             --CCCEEEEecCC------CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEE
Q psy17188        170 --DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLV  238 (504)
Q Consensus       170 --~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~  238 (504)
                        .+..++.++.+      +.|++||++...   ...+..|...+.+++|+|||++|++++.++   .|++||+.+++..
T Consensus       140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~  216 (415)
T 2hqs_A          140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR  216 (415)
T ss_dssp             CCTTCEEEEEEECSSSSCCEEEEEEETTSCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred             CcCCCEEEEEEecCCCCccceEEEEcCCCCC---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE
Confidence              25667666544      799999997543   456677888999999999999999999875   8999999998875


Q ss_pred             EeecCCCCCeEEEEEccCCCEEE-EEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        239 RQFQGHTDGASCIDISADGTKLW-TGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       239 ~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                       .+..|...+.+++|+|||+.|+ +++.|+  .|++||+.+++..                ....+...+.+++|+|+|+
T Consensus       217 -~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~----------------~l~~~~~~~~~~~~spdg~  279 (415)
T 2hqs_A          217 -QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR----------------QVTDGRSNNTEPTWFPDSQ  279 (415)
T ss_dssp             -EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------ECCCCSSCEEEEEECTTSS
T ss_pred             -EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE----------------eCcCCCCcccceEECCCCC
Confidence             4666888999999999999887 666665  4999999988642                2334556789999999999


Q ss_pred             EEEEEeC-CC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC---CCeEEEEecCCCCCCCccccc
Q psy17188        316 TLIVGGE-AS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY---KSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       316 ~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      +|++++. ++  .|.+||+.+++.   ..+..+...+..++|+|+++.  ++.++.   +..|.+||+......    .+
T Consensus       280 ~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdG~~--l~~~~~~~g~~~i~~~d~~~~~~~----~l  350 (415)
T 2hqs_A          280 NLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQDADVSSDGKF--MVMVSSNGGQQHIAKQDLATGGVQ----VL  350 (415)
T ss_dssp             EEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEEEEECTTSSE--EEEEEECSSCEEEEEEETTTCCEE----EC
T ss_pred             EEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccCeEECCCCCE--EEEEECcCCceEEEEEECCCCCEE----Ee
Confidence            9988876 44  677788877642   233445567889999999994  444443   368999999865321    11


Q ss_pred             ccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                        ..+ ..+.+++|+|||++|++++.++   .|++||+....   ...+..+...|.+++|+|...
T Consensus       351 --~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          351 --SST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             --CCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC---EEECCCSSSEEEEEEECCCCC
T ss_pred             --cCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc---EEEeeCCCCCCcCCccccccc
Confidence              122 2788999999999999988777   79999987543   344567788899999999654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.96  E-value=3.2e-27  Score=240.32  Aligned_cols=324  Identities=13%  Similarity=0.111  Sum_probs=220.2

Q ss_pred             EEEEEcCCCcEEEEecCCeEEEEeCCCCCCC-Cceeeeeec------------CCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        117 CAVTISNPTKYVYTGGKGCVKVWDISQPGSK-TPVSQLDCL------------QRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~-~~~~~~~~~------------~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ..+.|+ +++++....|+ | +||+.+++.. ..+......            .+...|.+++|+|| +.++.+. ++.|
T Consensus        29 ~~~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i  103 (706)
T 2z3z_A           29 VGLQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGL  103 (706)
T ss_dssp             TTCEEE-TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEE
T ss_pred             CCCcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEE
Confidence            335666 45555555566 8 9999987542 222211100            01156999999999 6666664 5999


Q ss_pred             EEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeEEEeecCCCCC-----------
Q psy17188        184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDG-----------  247 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~h~~~-----------  247 (504)
                      ++||+.+++.   ..+..+...+.+++|+|||+.|+++ .++.|++||+.+     ++.......+...           
T Consensus       104 ~~~d~~~~~~---~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee  179 (706)
T 2z3z_A          104 VGFDMLARKV---TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE  179 (706)
T ss_dssp             EEEETTTTEE---EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred             EEEECCCCce---EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence            9999987643   3445566678889999999999985 679999999998     8776655544443           


Q ss_pred             ---eEEEEEccCCCEEEEEc---------------------------------CCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        248 ---ASCIDISADGTKLWTGG---------------------------------LDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       248 ---v~~~~~~~~~~~l~s~~---------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                         +.++.|+|||++|++++                                 .+..|++||+.+++...          
T Consensus       180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~----------  249 (706)
T 2z3z_A          180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY----------  249 (706)
T ss_dssp             TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE----------
T ss_pred             cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe----------
Confidence               48899999999999987                                 44689999999887432          


Q ss_pred             CcccceecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCC---CceeeEEECC--CCCCc
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSA---PACYALAISP--DSKSP  361 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~---~~i~~~~~~~--~~~~~  361 (504)
                         ......+...+.+++|+|||+.|++++.++     .|.+||+.+++.........+.   ..+..++|+|  +++  
T Consensus       250 ---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~--  324 (706)
T 2z3z_A          250 ---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ--  324 (706)
T ss_dssp             ---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE--
T ss_pred             ---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE--
Confidence               111123556789999999999999887665     8999999887322221111222   1246789999  887  


Q ss_pred             eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE-EEEcCCCCEEEEeeCC-C----cEEEeeCCCCCcceeecc
Q psy17188        362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEA-S----NLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       362 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~  435 (504)
                      +++++..++.+++|+++....  ....+  ..+...+.. ++|+|+|+.|+.++.+ +    .|+.||+.+++....   
T Consensus       325 ~l~~~~~~g~~~l~~~~~~~~--~~~~l--~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l---  397 (706)
T 2z3z_A          325 FIWQSRRDGWNHLYLYDTTGR--LIRQV--TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL---  397 (706)
T ss_dssp             EEEEECTTSSCEEEEEETTSC--EEEEC--CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES---
T ss_pred             EEEEEccCCccEEEEEECCCC--EEEec--CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec---
Confidence            777888889999998863211  11111  234555666 7999999988765544 3    577777776543222   


Q ss_pred             cCCCCceeEEEECCCCCEEEEeeCC----CcEEEEEcCCcc
Q psy17188        436 TSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQT  472 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~s~~~d----g~i~iwd~~~~~  472 (504)
                      . +...+..++|+||+++|+..+.+    +.|++||+.+++
T Consensus       398 ~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          398 T-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             C-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             c-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            1 45568899999999998876543    569999998887

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=6.9e-27  Score=216.30  Aligned_cols=306  Identities=15%  Similarity=0.276  Sum_probs=207.2

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-CcEEEEECC--CCe--EEEeecCCCCC
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVWDLH--NQT--LVRQFQGHTDG  247 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iwd~~--~~~--~~~~~~~h~~~  247 (504)
                      .+++++.++.|++|++.............+...+.+++|+|++++|++++.+ +.|.+|++.  +++  .+..+..+. .
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~   85 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S   85 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence            3444478999999999642211122334566778899999999988888876 899999998  544  444555444 7


Q ss_pred             eEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCc
Q psy17188        248 ASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASN  325 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~  325 (504)
                      +..++|+|++++|++++ .++.|.+||+..+....             ..........+.+++|+|+++++++++ .++.
T Consensus        86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~-------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  152 (343)
T 1ri6_A           86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG-------------VVDVVEGLDGCHSANISPDNRTLWVPALKQDR  152 (343)
T ss_dssp             CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE-------------EEEEECCCTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred             CcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc-------------ccccccCCCCceEEEECCCCCEEEEecCCCCE
Confidence            89999999999876665 48899999995332110             112223334588899999999888887 8899


Q ss_pred             EEEEeCCC-CCcccee--eecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-CCcccccccc----cCCC
Q psy17188        326 LSIWDLAS-PTPRIKA--ELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCL----QRDN  396 (504)
Q Consensus       326 i~v~d~~~-~~~~~~~--~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~----~~~~  396 (504)
                      |.+||+.+ ++.....  .... ....+..++|+|+++. ++++...++.+.+|++..... ..........    ....
T Consensus       153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~-l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  231 (343)
T 1ri6_A          153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY-AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR  231 (343)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred             EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE-EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence            99999987 4322221  2222 3346788999999985 445666889999999964221 1111111111    1234


Q ss_pred             ceEEEEEcCCCCEEEEee-CCCcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEc--CC
Q psy17188        397 YIRSVKLLPDGRTLIVGG-EASNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDL--HN  470 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~--~~  470 (504)
                      .+..++|+|+|++|+++. .++.|.+||+.  +++.........+.. +..++|+|++++|++++ .++.|.+|++  .+
T Consensus       232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~  310 (343)
T 1ri6_A          232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ  310 (343)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred             CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence            567899999999887554 78999999998  333333333333333 78899999999988887 5899999954  46


Q ss_pred             cce--EEEEeecCCceEEEEEccCCCE
Q psy17188        471 QTL--VRQFQGHTDGASCIDISADGTK  495 (504)
Q Consensus       471 ~~~--~~~~~~h~~~v~~~~~s~d~~~  495 (504)
                      ++.  +..+.. .....+++|.++.+.
T Consensus       311 g~~~~~~~~~~-g~~p~~i~~~~~~~~  336 (343)
T 1ri6_A          311 GLLHEKGRYAV-GQGPMWVVVNAHEGG  336 (343)
T ss_dssp             TEEEEEEEEEC-SSSCCEEEEEEEC--
T ss_pred             ceeeEcccccc-CCCCeeEEEEcccCC
Confidence            643  444443 345778888886543

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=2e-26  Score=213.20  Aligned_cols=307  Identities=16%  Similarity=0.273  Sum_probs=204.6

Q ss_pred             EEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC-CcEEEEeCC--CCCccceeeeecC
Q psy17188        127 YVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLA--SPTPRIKAELTSS  202 (504)
Q Consensus       127 ~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~--~~~~~~~~~~~~~  202 (504)
                      ++++++ |+.|++|+++..+..   .......+...+.+++|+|++++|++++.+ +.|.+|++.  +++......+..+
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   83 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGAL---TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP   83 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCE---EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred             EEEeCCCCCeEEEEEECCCCcE---EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence            444434 999999999642221   222223567789999999999999888876 899999998  4444333444443


Q ss_pred             cCceEEEEECCCCCEEEEEeC-CCcEEEEEC---CCCeEEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCC-
Q psy17188        203 APACYALAISPDSKVCFSCCS-DGNIAVWDL---HNQTLVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLRE-  276 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~-  276 (504)
                      . .+..++|+|++++|++++. ++.|.+||+   ...+.+..+.. ...+.+++|+|++++|++++ .++.|++||+.+ 
T Consensus        84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~  161 (343)
T 1ri6_A           84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD  161 (343)
T ss_dssp             S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence            3 6789999999998877665 788999999   44455555554 34688999999999888776 899999999987 


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCC--CCccceeeec---c---CCC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS--PTPRIKAELT---S---SAP  347 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~--~~~~~~~~~~---~---~~~  347 (504)
                      +++.....          ..........+..++|+|+++++++++ .++.+.+|++..  ++........   .   ...
T Consensus       162 ~~~~~~~~----------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  231 (343)
T 1ri6_A          162 GHLVAQDP----------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR  231 (343)
T ss_dssp             SCEEEEEE----------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred             Cceeeecc----------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence            65431100          011112234678899999999776654 789999999964  3222122222   1   123


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCC-
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLA-  425 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~-  425 (504)
                      .+..++|+|+++. ++++...++.|.+||+......  ............+..++|+|+|++|++++ .++.|.+|+++ 
T Consensus       232 ~~~~i~~s~dg~~-l~v~~~~~~~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~  308 (343)
T 1ri6_A          232 WAADIHITPDGRH-LYACDRTASLITVFSVSEDGSV--LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  308 (343)
T ss_dssp             CEEEEEECTTSSE-EEEEETTTTEEEEEEECTTSCC--EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             CccceEECCCCCE-EEEEecCCCEEEEEEEcCCCCc--eEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            4567999999985 4556678999999999742211  11111112223378999999999888887 57999999554 


Q ss_pred             -CCCcceeecccCCCCceeEEEECCCCC
Q psy17188        426 -SPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       426 -~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                       +++......+... ....+++|.++.+
T Consensus       309 ~~g~~~~~~~~~~g-~~p~~i~~~~~~~  335 (343)
T 1ri6_A          309 EQGLLHEKGRYAVG-QGPMWVVVNAHEG  335 (343)
T ss_dssp             TTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred             CCceeeEccccccC-CCCeeEEEEcccC
Confidence             4443333333322 2345566666543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.96  E-value=1.1e-26  Score=236.37  Aligned_cols=324  Identities=10%  Similarity=0.083  Sum_probs=213.1

Q ss_pred             eEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--cceeeeecC--------------cCceEEEEECCCCCEEEEEeCCC
Q psy17188        162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSS--------------APACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      +..+.|.  ++.+++++.++ | +||+.+++.  .........              ...|.+++|+|| +.++.+ .++
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~  101 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG  101 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence            4557788  66677777777 8 999998775  322211110              146999999999 666555 459


Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-----CceEEEeecCCCCC-CCcccceec
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-----GCVKVWDISQPGSK-TPVSQLDCL  299 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-----~~~~~~~~~~~~~~-~~~~~~~~~  299 (504)
                      .|++||+.+++..... .+...+.+++|+|||++|+++ .|+.|++||+.+     ++............ ....  ...
T Consensus       102 ~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~~~  177 (706)
T 2z3z_A          102 GLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA--VHQ  177 (706)
T ss_dssp             EEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC--CGG
T ss_pred             EEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc--hhh
Confidence            9999999998765544 467788999999999999985 689999999988     65431100000000 0000  001


Q ss_pred             ccCCceEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCCccceeeeccCC
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGG---------------------------------EASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~---------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      .+...+.++.|+|||++|++++                                 .+..|++||+.+++.........+.
T Consensus       178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~  257 (706)
T 2z3z_A          178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE  257 (706)
T ss_dssp             GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred             hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence            1123368899999999999987                                 4467999999887543333223456


Q ss_pred             CceeeEEECCCCCCceeeeccCC-----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcC--CCCEEEEeeCCCcE
Q psy17188        347 PACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGEASNL  419 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~~dg~i  419 (504)
                      ..+..++|+||++.  +++++.+     ..|.+||+.++.....+...........+..++|+|  ||++++++..++.+
T Consensus       258 ~~~~~~~~spdg~~--l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~  335 (706)
T 2z3z_A          258 KFLTNLSWSPDENI--LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN  335 (706)
T ss_dssp             CEEEEEEECTTSSE--EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred             eeEeeEEEECCCCE--EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence            67899999999994  4444444     389999988752221111111111111245789999  99999999999999


Q ss_pred             EEeeCC-CCCcceeecccCCCCceeE-EEECCCCCEEEEeeC-CC----cEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        420 SIWDLA-SPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCS-DG----NIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       420 ~iwd~~-~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                      ++|+++ ++..  ...+..+...+.. ++|+||++.|+.++. ++    .|+.||+.+++ ...+. |...+.+++|+||
T Consensus       336 ~l~~~~~~~~~--~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spd  411 (706)
T 2z3z_A          336 HLYLYDTTGRL--IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPD  411 (706)
T ss_dssp             EEEEEETTSCE--EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTT
T ss_pred             EEEEEECCCCE--EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCC
Confidence            999876 3332  2334455566766 799999998876554 44    67777877766 33443 6778999999999


Q ss_pred             CCEEEEecC
Q psy17188        493 GTKLWTGGL  501 (504)
Q Consensus       493 ~~~l~s~s~  501 (504)
                      |++|+..+.
T Consensus       412 g~~l~~~~~  420 (706)
T 2z3z_A          412 GSAIIDIFQ  420 (706)
T ss_dssp             SSEEEEEEE
T ss_pred             CCEEEEEec
Confidence            999887644

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=9.1e-26  Score=207.72  Aligned_cols=285  Identities=13%  Similarity=0.161  Sum_probs=200.1

Q ss_pred             EEccCCCE-EEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeE-EEeec
Q psy17188        166 KLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTL-VRQFQ  242 (504)
Q Consensus       166 ~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~  242 (504)
                      .|.+++++ +++.+.++.|.+||+.+++..  ..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+.
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~   80 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL--NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ   80 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEE--EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCccccee--eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence            45565555 667778899999999987653  3334445556 9999999997776665 88999999999987 77777


Q ss_pred             CCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE
Q psy17188        243 GHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  319 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  319 (504)
                      .+..+..+++|+|++++|+++..++   .|.+||+.+++..                ........+.+++|+|+|+++++
T Consensus        81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~----------------~~~~~~~~~~~~~~spdg~~l~~  144 (331)
T 3u4y_A           81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI----------------STIPIPYDAVGIAISPNGNGLIL  144 (331)
T ss_dssp             ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE----------------EEEECCTTEEEEEECTTSSCEEE
T ss_pred             cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE----------------EEEECCCCccceEECCCCCEEEE
Confidence            6766666699999999999655553   8999999988742                12233445689999999986655


Q ss_pred             E-eCCCc-EEEEeCCCCCccce--eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        320 G-GEASN-LSIWDLASPTPRIK--AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       320 ~-~~dg~-i~v~d~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      + ..++. +.+|++........  ............++|+|+++. ++++...++.|.+||+...........   ....
T Consensus       145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~d~~~~~~~~~~~~---~~~~  220 (331)
T 3u4y_A          145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF-AFVANLIGNSIGILETQNPENITLLNA---VGTN  220 (331)
T ss_dssp             EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE-EEEEETTTTEEEEEECSSTTSCEEEEE---EECS
T ss_pred             EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE-EEEEeCCCCeEEEEECCCCcccceeee---ccCC
Confidence            5 55578 99999875432211  112233446789999999985 556666789999999986544111222   2234


Q ss_pred             CceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCC----C---CceeEEEECCCCCEEEEeeC-CCcEEEE
Q psy17188        396 NYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSS----A---PACYALAISPDSKVCFSCCS-DGNIAVW  466 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~----~---~~v~~l~~s~~~~~l~s~~~-dg~i~iw  466 (504)
                      ..+..++|+|||++|++++ .++.|.+||+.+++..........    .   .....++|+||+++|++++. ++.|.+|
T Consensus       221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~  300 (331)
T 3u4y_A          221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF  300 (331)
T ss_dssp             SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence            5677999999999777665 477899999988765222222111    1   12245899999998876655 6699999


Q ss_pred             EcCCcce
Q psy17188        467 DLHNQTL  473 (504)
Q Consensus       467 d~~~~~~  473 (504)
                      |+.+...
T Consensus       301 d~~~~~~  307 (331)
T 3u4y_A          301 TISGKVV  307 (331)
T ss_dssp             ETTSCEE
T ss_pred             EecCCcc
Confidence            9987543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.95  E-value=6e-26  Score=231.69  Aligned_cols=334  Identities=10%  Similarity=0.004  Sum_probs=217.6

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCC---cEEEEEEcCCCcEEEEec-C---------CeEE
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGE---VVCAVTISNPTKYVYTGG-K---------GCVK  137 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~---~V~~v~~s~~~~~l~~~~-d---------~~i~  137 (504)
                      ..+..++|+|||+.+.. ..++.+.+|+...... ...+ +|..   .|.+++|||||++|+++. +         +.+.
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~   94 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV   94 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence            34667788888885544 4556677777654433 3334 4544   499999999999999876 3         7899


Q ss_pred             EEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC-------------
Q psy17188        138 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-------------  204 (504)
Q Consensus       138 vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-------------  204 (504)
                      +||++++.. ..+.  ....+...+..++|||||++||+++. +.|++||+.+++...  ....+..             
T Consensus        95 ~~d~~~~~~-~~l~--~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~  168 (723)
T 1xfd_A           95 LSKIPHGDP-QSLD--PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYE  168 (723)
T ss_dssp             EEESSSCCC-EECC--CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHH
T ss_pred             EEECCCCce-Eecc--CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEE
Confidence            999988643 1111  11234556889999999999999875 799999998765432  2222222             


Q ss_pred             -----ceEEEEECCCCCEEEEEeCCC----------------------------------cEEEEECCCCeEEEeecCC-
Q psy17188        205 -----ACYALAISPDSKVCFSCCSDG----------------------------------NIAVWDLHNQTLVRQFQGH-  244 (504)
Q Consensus       205 -----~v~~~~~s~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~h-  244 (504)
                           .+.+++|+|||+.|++++.|+                                  .|++||+.+++....+..+ 
T Consensus       169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~  248 (723)
T 1xfd_A          169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD  248 (723)
T ss_dssp             HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred             EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence                 237899999999999887553                                  7999999988865666654 


Q ss_pred             -----CCCeEEEEEccCCCEEEEEcC----CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCce----EEEEEc
Q psy17188        245 -----TDGASCIDISADGTKLWTGGL----DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI----RSVKLL  311 (504)
Q Consensus       245 -----~~~v~~~~~~~~~~~l~s~~~----dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~  311 (504)
                           ...+..++|+|||++|++.+.    +..|++||+.+++....              ....+...+    ..++|+
T Consensus       249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~s  314 (723)
T 1xfd_A          249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK--------------HEDESEAWLHRQNEEPVFS  314 (723)
T ss_dssp             CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE--------------EEEECSSCCCCCCCCCEEC
T ss_pred             cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE--------------EEeccCCEEeccCCCceEc
Confidence                 667899999999998876643    35799999998875321              111122222    368999


Q ss_pred             CCCCEEEE--EeCCC------cEEEEe-CCCCCccceeeeccCCCceee-EEECCCCCCceeeeccCC--CeEEEEecCC
Q psy17188        312 PDGRTLIV--GGEAS------NLSIWD-LASPTPRIKAELTSSAPACYA-LAISPDSKSPFFSSHHYK--SCVKVWDISQ  379 (504)
Q Consensus       312 ~~~~~l~~--~~~dg------~i~v~d-~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~--~~i~i~d~~~  379 (504)
                      |||+.|+.  ...++      .|.+|| ...+.......+......+.. ++|+|+++.+ +.++..+  +.+++|++..
T Consensus       315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~l~~~~~  393 (723)
T 1xfd_A          315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKI-YFLSTEDLPRRRQLYSANT  393 (723)
T ss_dssp             TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEE-EEEESSSCTTCCEEEEECS
T ss_pred             CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEE-EEEEcCCCCcceEEEEEeC
Confidence            99997775  45666      567777 343321002222222334444 6999999953 2334444  7899999875


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC---cEEEeeCCCCC
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPT  428 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~iwd~~~~~  428 (504)
                      ..............+...+..++|+|||++|+.....-   ...+++..++.
T Consensus       394 ~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~  445 (723)
T 1xfd_A          394 VGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK  445 (723)
T ss_dssp             STTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred             CCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCC
Confidence            43211111110011455678999999999888754332   23445554433

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.95  E-value=1e-24  Score=202.57  Aligned_cols=274  Identities=11%  Similarity=0.131  Sum_probs=204.4

Q ss_pred             CCceEEEEEccCCCEEEEecC-------CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEE
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGE-------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVW  230 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw  230 (504)
                      ...+..++|+|++++|++++.       ++.|.+||..+++...  .+.. ...+..++|+|++++++++ ..++.|.+|
T Consensus        40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~  116 (353)
T 3vgz_A           40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ--AIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI  116 (353)
T ss_dssp             ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE--EEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE--EEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence            456789999999999988774       5689999998776432  2322 2346789999999955544 557899999


Q ss_pred             ECCCCeEEEeecCCCCC---------eEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        231 DLHNQTLVRQFQGHTDG---------ASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      |+.+++.+..+..+...         +.+++|+|+++++++++  .++.|.+||+.+++...               ...
T Consensus       117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---------------~~~  181 (353)
T 3vgz_A          117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---------------AIQ  181 (353)
T ss_dssp             ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE---------------EEC
T ss_pred             eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE---------------Eec
Confidence            99999988888765432         78899999999877765  47899999999887421               111


Q ss_pred             ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .....+..++|+|+++++++++.++.+.+||..+++.......                                   ..
T Consensus       182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~-----------------------------------~~  226 (353)
T 3vgz_A          182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL-----------------------------------LD  226 (353)
T ss_dssp             CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-----------------------------------CC
T ss_pred             CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-----------------------------------CC
Confidence            1334477899999999999999999999999887532111000                                   00


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                                  ..+...+..++|+|+++++++++.+ +.|.+||..+++.........    ...++|+|+++++++++
T Consensus       227 ------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~  290 (353)
T 3vgz_A          227 ------------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTH  290 (353)
T ss_dssp             ------------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEE
T ss_pred             ------------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEE
Confidence                        0123345689999999987776654 889999998887655554432    24579999999766655


Q ss_pred             -CCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188        459 -SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       459 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                       .++.|.+||+.+++.+..+..+ ..+.+++|+|||++|+++..+
T Consensus       291 ~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          291 RQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ  334 (353)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence             6899999999999998888754 468999999999988877665

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=1.9e-25  Score=202.01  Aligned_cols=258  Identities=14%  Similarity=0.167  Sum_probs=190.1

Q ss_pred             EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCccccee
Q psy17188        220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      ..+.|+.|++||+.+++..... .|...|.+++|+|++++|++++ ++.|++||+.+ ++...              ...
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~--------------~~~   80 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVW-QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK--------------VDT   80 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEE-EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE--------------CCC
T ss_pred             CCCcceeEEEEeCCCCceeeec-cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE--------------ecc
Confidence            3457889999999998876544 4889999999999999999887 88999999998 76421              111


Q ss_pred             cccCCceEEEEEcCCCCEEEEEeC--CCcEEEE--eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIW--DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~--d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      ......+.+++|+|++++|++++.  ++...+|  +..+..   ...+..+. .+..++|+|+++. +++++..++.+++
T Consensus        81 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~-~~~~~~~spdg~~-l~~~~~~~~~~~l  155 (297)
T 2ojh_A           81 GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKNL-PSYWHGWSPDGKS-FTYCGIRDQVFDI  155 (297)
T ss_dssp             TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSSS-SEEEEEECTTSSE-EEEEEEETTEEEE
T ss_pred             ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecCC-CccceEECCCCCE-EEEEECCCCceEE
Confidence            122356888999999999999983  3445555  444432   22222222 4888999999985 3446777899999


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      |+++......    .....+...+.+++|+|++++|++++ .++.+++|++..... ....+..+...+..++|+|++++
T Consensus       156 ~~~~~~~~~~----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~  230 (297)
T 2ojh_A          156 YSMDIDSGVE----TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-SVERITDSAYGDWFPHPSPSGDK  230 (297)
T ss_dssp             EEEETTTCCE----EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-CEEECCCCSEEEEEEEECTTSSE
T ss_pred             EEEECCCCcc----eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-CcEEEecCCcccCCeEECCCCCE
Confidence            9975432211    12234567789999999999888766 588999998863221 12334556677889999999999


Q ss_pred             EEEeeCC-----------CcEEEEEcCCcce--EEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        454 CFSCCSD-----------GNIAVWDLHNQTL--VRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       454 l~s~~~d-----------g~i~iwd~~~~~~--~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      |++++.+           +.|++||+.+++.  +..+.+|...+.+++|+||+++|++++.|.
T Consensus       231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            9988765           5699999998876  444557888999999999999999888764

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.94  E-value=2e-25  Score=227.44  Aligned_cols=337  Identities=14%  Similarity=0.069  Sum_probs=222.4

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCC---CceEEEEEccCCCEEEEecC---------CCcEEE
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRD---NYIRSVKLLPDGRTLIVGGE---------ASNLSI  185 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~---------dg~i~i  185 (504)
                      .++|+|++++++++.|+.|++||+.+++..   ..+.  .+.   ..+.+++|||||++|++++.         ++.|++
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~---~~~~--~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~   94 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIETGQSY---TILS--NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI   94 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSSCCEE---EEEC--HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCCCcEE---EEEc--cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence            678999998888878999999999886422   1111  121   13889999999999999876         689999


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCe----------------
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGA----------------  248 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v----------------  248 (504)
                      ||+.+++......+.   ..+..++|||||+.|+++. ++.|++||+.+++..+.. .++...|                
T Consensus        95 ~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~  170 (719)
T 1z68_A           95 YDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT  170 (719)
T ss_dssp             EETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred             EECCCCccccceecC---cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence            999877641112222   4578899999999999885 789999999988765543 2232222                


Q ss_pred             -EEEEEccCCCEEEEEcCCC----------------------------------eEEEEECCCCceE-EEeecCCCCCCC
Q psy17188        249 -SCIDISADGTKLWTGGLDN----------------------------------TVRSWDLREGCVK-VWDISQPGSKTP  292 (504)
Q Consensus       249 -~~~~~~~~~~~l~s~~~dg----------------------------------~i~~wd~~~~~~~-~~~~~~~~~~~~  292 (504)
                       .+++|+|||++|++++.|.                                  .|++||+.+++.. ...+..      
T Consensus       171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~------  244 (719)
T 1z68_A          171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV------  244 (719)
T ss_dssp             SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC------
T ss_pred             cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC------
Confidence             4899999999999987652                                  6778888776521 000000      


Q ss_pred             cccceecccCCceEEEEEcCCCCEEEEEeCC----CcEEEEe----CCCCCccceee--eccCCCcee-----eEEECCC
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWD----LASPTPRIKAE--LTSSAPACY-----ALAISPD  357 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d----~~~~~~~~~~~--~~~~~~~i~-----~~~~~~~  357 (504)
                        ......+...+..++|+||++++++....    ..|.+||    ..+++......  ...+...+.     .+.|+||
T Consensus       245 --~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd  322 (719)
T 1z68_A          245 --PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD  322 (719)
T ss_dssp             --CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT
T ss_pred             --CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC
Confidence              01123466778999999998777664332    2488899    76654333221  134444555     7899999


Q ss_pred             CCCceeeeccCCC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCC--CC
Q psy17188        358 SKSPFFSSHHYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLAS--PT  428 (504)
Q Consensus       358 ~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~--~~  428 (504)
                      ++.+++++...++  .|.+||+.... .   ..+  ..+...+..+.++ +++.|+..+.+     +..++|.+..  +.
T Consensus       323 g~~l~~~~~~~~g~~~l~~~~~~~~~-~---~~l--t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~  395 (719)
T 1z68_A          323 AISYYKIFSDKDGYKHIHYIKDTVEN-A---IQI--TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYP  395 (719)
T ss_dssp             SSCEEEEEECTTSCEEEEEESSCSTT-C---EEC--SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSS
T ss_pred             CCeEEEEEEccCCceEEEEEECCCCc-e---Eec--ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCC
Confidence            9975555555555  46666665432 1   111  1234456777777 88877766654     7788888754  22


Q ss_pred             c-ceeec--ccCCCCceeEEEECCCCCEEEEe-eCC--CcEEEEEcCCcceEEEEe
Q psy17188        429 P-RIKAE--LTSSAPACYALAISPDSKVCFSC-CSD--GNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       429 ~-~~~~~--~~~~~~~v~~l~~s~~~~~l~s~-~~d--g~i~iwd~~~~~~~~~~~  478 (504)
                      . .....  +.++...+..+.|+||+++++.. +.+  ..+++||+.+++.+..+.
T Consensus       396 ~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~  451 (719)
T 1z68_A          396 PSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE  451 (719)
T ss_dssp             CCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred             CCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence            1 11111  22245567788999999887743 333  468899998887654443

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.94  E-value=5.2e-25  Score=203.14  Aligned_cols=278  Identities=13%  Similarity=0.129  Sum_probs=202.2

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCc-C-ceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCC----
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSA-P-ACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGH----  244 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h----  244 (504)
                      ++|++++.++.|.+||+.+++..  ..+.... . .+..++|+|+++.++ ++..++.|.+||+.+++.+..+...    
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~   79 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVD--KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEE--EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEE--EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence            47888999999999999876542  2333221 1 477899999998664 5556789999999999888776632    


Q ss_pred             -CCCeEEEEEccCCCEEEEEc------------CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        245 -TDGASCIDISADGTKLWTGG------------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       245 -~~~v~~~~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                       ...+.+++|+|++++|++++            .++.|.+||+.+++..                ........+..++|+
T Consensus        80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~----------------~~~~~~~~~~~~~~s  143 (337)
T 1pby_B           80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR----------------KAFEAPRQITMLAWA  143 (337)
T ss_dssp             EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE----------------EEEECCSSCCCEEEC
T ss_pred             ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE----------------EEEeCCCCcceeEEC
Confidence             12677899999999988886            5799999999887642                111223457788999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC---------------------
Q psy17188        312 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS---------------------  370 (504)
Q Consensus       312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------------------  370 (504)
                      |++++|+++  ++.|.+||+.+++...  .+..+. ....+.++|+++.+ ++++..++                     
T Consensus       144 ~dg~~l~~~--~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~s~dg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (337)
T 1pby_B          144 RDGSKLYGL--GRDLHVMDPEAGTLVE--DKPIQS-WEAETYAQPDVLAV-WNQHESSGVMATPFYTARKDIDPADPTAY  217 (337)
T ss_dssp             TTSSCEEEE--SSSEEEEETTTTEEEE--EECSTT-TTTTTBCCCBCCCC-CCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred             CCCCEEEEe--CCeEEEEECCCCcEee--eeeccc-cCCCceeCCCccEE-eeeccCCCceeeeeecccccccccccccc
Confidence            999988888  6889999998774332  222221 11233789998863 33333333                     


Q ss_pred             --eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188        371 --CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       371 --~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                        .|.+||.......    ......+...+..++|+|||++++++  ++.|++||+.+++........   ..+.+++|+
T Consensus       218 ~~~v~~~d~~~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s  288 (337)
T 1pby_B          218 RTGLLTMDLETGEMA----MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVS  288 (337)
T ss_dssp             EEEEEEEETTTCCEE----EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEEC
T ss_pred             ccceEEEeCCCCCce----EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC---CceeeEEEC
Confidence              4688998765332    22223445667899999999999988  789999999887654444332   346788999


Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC
Q psy17188        449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  482 (504)
Q Consensus       449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  482 (504)
                      ||+++|++++.++.|++||+.+++.+..+..+..
T Consensus       289 ~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          289 TDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             TTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             CCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence            9999999999999999999999999988876543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.94  E-value=3.8e-24  Score=198.75  Aligned_cols=278  Identities=14%  Similarity=0.111  Sum_probs=201.8

Q ss_pred             eecCCCcEEEEEEcCCCcEEEEec--------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cC
Q psy17188        109 TLSHGEVVCAVTISNPTKYVYTGG--------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GE  179 (504)
Q Consensus       109 ~~~h~~~V~~v~~s~~~~~l~~~~--------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~  179 (504)
                      .......+..++|+|+++++++++        ++.|.+||..+++..   ..+.   ....+..++|+|++++++++ ..
T Consensus        36 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~---~~~~~~~~~~s~dg~~l~v~~~~  109 (353)
T 3vgz_A           36 RKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT---QAIH---NDLKPFGATINNTTQTLWFGNTV  109 (353)
T ss_dssp             EEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE---EEEE---ESSCCCSEEEETTTTEEEEEETT
T ss_pred             hhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE---EEEe---cCCCcceEEECCCCCEEEEEecC
Confidence            344556788999999998887766        568999999875322   2222   23447789999999966554 55


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcC---------ceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEeecCCCCCe
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAP---------ACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDGA  248 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v  248 (504)
                      ++.|.+||..+++...  .+..+..         .+.+++|+|+++++++++  .++.|.+||+.+++.+..+..+...+
T Consensus       110 ~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  187 (353)
T 3vgz_A          110 NSAVTAIDAKTGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS  187 (353)
T ss_dssp             TTEEEEEETTTCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC
T ss_pred             CCEEEEEeCCCCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc
Confidence            7999999998776432  2333221         268899999999877776  47889999999999999888666778


Q ss_pred             EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-CcEE
Q psy17188        249 SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLS  327 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~  327 (504)
                      .+++|+|++++|++++.++.|.+||+.+++.... ..          .....+...+..++|+|+++++++++.+ +.|.
T Consensus       188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~-~~----------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~  256 (353)
T 3vgz_A          188 TGLALDSEGKRLYTTNADGELITIDTADNKILSR-KK----------LLDDGKEHFFINISLDTARQRAFITDSKAAEVL  256 (353)
T ss_dssp             CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE-EE----------CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred             ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE-EE----------cCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence            9999999999999999999999999998875321 00          0011234457889999999987777654 8899


Q ss_pred             EEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC
Q psy17188        328 IWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  407 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g  407 (504)
                      +||..+++....                                   +...               .   ...++|+|+|
T Consensus       257 ~~d~~~~~~~~~-----------------------------------~~~~---------------~---~~~~~~s~dg  283 (353)
T 3vgz_A          257 VVDTRNGNILAK-----------------------------------VAAP---------------E---SLAVLFNPAR  283 (353)
T ss_dssp             EEETTTCCEEEE-----------------------------------EECS---------------S---CCCEEEETTT
T ss_pred             EEECCCCcEEEE-----------------------------------EEcC---------------C---CceEEECCCC
Confidence            999876532110                                   0000               0   0268899999


Q ss_pred             CEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188        408 RTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  461 (504)
Q Consensus       408 ~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg  461 (504)
                      +++++++ .++.|.+||..+++.......   ...+..++|+||+++|+++..++
T Consensus       284 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          284 NEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             TEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEECC
T ss_pred             CEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEccc
Confidence            9766655 688999999988765544433   23578899999999888776654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.94  E-value=1e-24  Score=200.60  Aligned_cols=271  Identities=14%  Similarity=0.149  Sum_probs=190.9

Q ss_pred             EECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCC
Q psy17188        210 AISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQP  287 (504)
Q Consensus       210 ~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~  287 (504)
                      .|.++++ .+++.+.++.|.+||+.+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++...      
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~------   76 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV------   76 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE------
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE------
Confidence            4555555 56777789999999999999988888777777 9999999997666655 8899999999887411      


Q ss_pred             CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188        288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS  364 (504)
Q Consensus       288 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  364 (504)
                              .....+.....+++|+|++++++++..++   .|.+||+.+++...  .+.. ......++|+|+++. +++
T Consensus        77 --------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~--~~~~-~~~~~~~~~spdg~~-l~~  144 (331)
T 3u4y_A           77 --------VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS--TIPI-PYDAVGIAISPNGNG-LIL  144 (331)
T ss_dssp             --------EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE--EEEC-CTTEEEEEECTTSSC-EEE
T ss_pred             --------EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE--EEEC-CCCccceEECCCCCE-EEE
Confidence                    11112223333499999999999655553   89999998764332  2332 335689999999986 555


Q ss_pred             eccCCCe-EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCc---ceeecccCCC
Q psy17188        365 SHHYKSC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP---RIKAELTSSA  439 (504)
Q Consensus       365 ~~~~~~~-i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~  439 (504)
                      +...++. +.+|++.......... ............++|+|+|+++++++ .++.|++||+.+++.   .....   ..
T Consensus       145 ~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~  220 (331)
T 3u4y_A          145 IDRSSANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TN  220 (331)
T ss_dssp             EEETTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CS
T ss_pred             EecCCCceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CC
Confidence            5556677 9999998643322221 12223445678999999999765554 688999999998776   33333   23


Q ss_pred             CceeEEEECCCCCEEEEee-CCCcEEEEEcCCcce--EEEEeec----CC---ceEEEEEccCCCEEEEecCCC
Q psy17188        440 PACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTL--VRQFQGH----TD---GASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ..+..++|+|||++|++++ .++.|.+||+.+++.  +..+..+    ..   ....++|+||+++|++++.++
T Consensus       221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~  294 (331)
T 3u4y_A          221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS  294 (331)
T ss_dssp             SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred             CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence            4567889999999776654 578899999999887  4444322    22   235689999999997776653

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.94  E-value=1.9e-24  Score=200.22  Aligned_cols=290  Identities=15%  Similarity=0.240  Sum_probs=191.1

Q ss_pred             CCCcEEEEeCCCCCccce-eeeecCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCe--EEEeecCCCCCeEEEE
Q psy17188        179 EASNLSIWDLASPTPRIK-AELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQT--LVRQFQGHTDGASCID  252 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~  252 (504)
                      .++.|.+|+++....... .....+......++|+||++ |++++.   ++.|.+|++.+++  .+..+..+...+..++
T Consensus        14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a   92 (347)
T 3hfq_A           14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA   92 (347)
T ss_dssp             SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence            355688887764332221 12334455678899999999 555554   6899999998775  4445455777889999


Q ss_pred             EccCCCEEEEEc-CCCeEEEEECC-CCceEEEe-ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        253 ISADGTKLWTGG-LDNTVRSWDLR-EGCVKVWD-ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       253 ~~~~~~~l~s~~-~dg~i~~wd~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                      |+|++++|++++ .++.+.+|++. ++...... ...... .+.    .......+.+++|+|+|+.+++...++.|.+|
T Consensus        93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-~p~----~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~  167 (347)
T 3hfq_A           93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-GPR----PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY  167 (347)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-CSS----TTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-CCC----ccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence            999999888877 68999999995 44433221 111110 000    11223458899999999966666678899999


Q ss_pred             eCC-CCCccceeeecc-CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-CCccccccccc----CCCceEEEE
Q psy17188        330 DLA-SPTPRIKAELTS-SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDCLQ----RDNYIRSVK  402 (504)
Q Consensus       330 d~~-~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~~----~~~~i~~~~  402 (504)
                      ++. +++......... ....+..++|+|+++. ++++...++.+.+|++..... ...........    ....+..++
T Consensus       168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  246 (347)
T 3hfq_A          168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY-AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR  246 (347)
T ss_dssp             EECTTSCEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE
T ss_pred             EECCCCcEEEeeeEEcCCCCCCceEEECCCCCE-EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE
Confidence            998 333222222222 2336778999999985 555667789999999875211 11111111111    124588999


Q ss_pred             EcCCCCEEEE-eeCCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCC-CcEEEE--EcCCcceEE
Q psy17188        403 LLPDGRTLIV-GGEASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVW--DLHNQTLVR  475 (504)
Q Consensus       403 ~s~~g~~l~~-~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-g~i~iw--d~~~~~~~~  475 (504)
                      |+|||++|++ ...++.|.+|++.. +..........+...+..++|+||+++|++++.+ +.|.+|  |.+++++..
T Consensus       247 ~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~  324 (347)
T 3hfq_A          247 LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL  324 (347)
T ss_dssp             ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred             ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence            9999998754 55689999999873 2333334444445567889999999999888764 899999  555676543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=5.2e-25  Score=199.06  Aligned_cols=258  Identities=15%  Similarity=0.132  Sum_probs=192.1

Q ss_pred             ecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEeecCC-CCCeEEEEEc
Q psy17188        177 GGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGH-TDGASCIDIS  254 (504)
Q Consensus       177 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~~~~~  254 (504)
                      ++.++.|++||+.+++.   ..+..|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+
T Consensus        18 ~~~~~~i~~~d~~~~~~---~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s   93 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKM---RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS   93 (297)
T ss_dssp             CCCCEEEEEEETTTTEE---EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred             CCcceeEEEEeCCCCce---eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence            45789999999987653   34556788899999999999999886 78999999999 8777777665 3678999999


Q ss_pred             cCCCEEEEEcC--CC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEE
Q psy17188        255 ADGTKLWTGGL--DN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIW  329 (504)
Q Consensus       255 ~~~~~l~s~~~--dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~  329 (504)
                      |++++|++++.  ++  .|..|+..+++..                 .......+..++|+|+++.|+ ++..++.+++|
T Consensus        94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~  156 (297)
T 2ojh_A           94 PDGALYAISDKVEFGKSAIYLLPSTGGTPR-----------------LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIY  156 (297)
T ss_dssp             TTSSEEEEEECTTTSSCEEEEEETTCCCCE-----------------ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             CCCCEEEEEEeCCCCcceEEEEECCCCceE-----------------EeecCCCccceEECCCCCEEEEEECCCCceEEE
Confidence            99999999883  34  4444555554421                 112223488899999999887 67788999999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                      ++.... .....+..+...+..++|+|+++. +++++..++.+++|++......  ..  ....+...+..++|+|+|++
T Consensus       157 ~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~~~~~~~~~--~~--~~~~~~~~~~~~~~s~dg~~  230 (297)
T 2ojh_A          157 SMDIDS-GVETRLTHGEGRNDGPDYSPDGRW-IYFNSSRTGQMQIWRVRVDGSS--VE--RITDSAYGDWFPHPSPSGDK  230 (297)
T ss_dssp             EEETTT-CCEEECCCSSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTSSC--EE--ECCCCSEEEEEEEECTTSSE
T ss_pred             EEECCC-CcceEcccCCCccccceECCCCCE-EEEEecCCCCccEEEECCCCCC--cE--EEecCCcccCCeEECCCCCE
Confidence            864332 223445556678999999999984 3344446888999988643211  11  12234567889999999999


Q ss_pred             EEEeeCC-----------CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC
Q psy17188        410 LIVGGEA-----------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  461 (504)
Q Consensus       410 l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg  461 (504)
                      |++++.+           +.|++||+.+++.........+...+..++|+|++++|++++.+.
T Consensus       231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            9988765           469999999887665655556677788899999999999887654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.94  E-value=2.5e-23  Score=193.74  Aligned_cols=310  Identities=14%  Similarity=0.190  Sum_probs=200.5

Q ss_pred             CCCEEEEec----CCCcEEEEeCCC--CCccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCC--Ce-
Q psy17188        170 DGRTLIVGG----EASNLSIWDLAS--PTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHN--QT-  236 (504)
Q Consensus       170 ~~~~l~~~~----~dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~--~~-  236 (504)
                      ...++++|+    .++.|.+|+++.  ++.......  +......++|+||+++|++++.+    +.|.+|++..  ++ 
T Consensus        12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~   89 (361)
T 3scy_A           12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL   89 (361)
T ss_dssp             GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred             CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence            334555653    456899997754  433323333  56667889999999999999886    7999998865  43 


Q ss_pred             -EEEeecCCCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCc-eEEE-e-ecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        237 -LVRQFQGHTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGC-VKVW-D-ISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       237 -~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                       .+.....+......+++  ++++|++++ .++.+.+|++.... +... . ....+. .   ..........+.+++|+
T Consensus        90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~-~---~~~~~~~~~~~~~~~~s  163 (361)
T 3scy_A           90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGS-G---PDKERQTMPHLHCVRIT  163 (361)
T ss_dssp             EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCC-C---SCTTTCSSCCEEEEEEC
T ss_pred             EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCC-C---CCccccCCCcceEEEEC
Confidence             33444445567778888  777777665 67899999997532 1100 0 000000 0   00011223446889999


Q ss_pred             CCCCEEEEEe-CCCcEEEEeCCCCCc----c-c------eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        312 PDGRTLIVGG-EASNLSIWDLASPTP----R-I------KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       312 ~~~~~l~~~~-~dg~i~v~d~~~~~~----~-~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      |+|+++++++ .++.+.+|++.....    . .      .............++|+|+++. ++++...++.|.+|++..
T Consensus       164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~~~~~  242 (361)
T 3scy_A          164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKF-AYLINEIGGTVIAFRYAD  242 (361)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTCEEEEEEEET
T ss_pred             CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCE-EEEEcCCCCeEEEEEecC
Confidence            9999776655 478999999876542    1 1      1112233446789999999984 445555789999999974


Q ss_pred             CCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCC--CcEEEeeCC--CCCcceeecccCCCCceeEEEECCCCCEE
Q psy17188        380 PGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLA--SPTPRIKAELTSSAPACYALAISPDSKVC  454 (504)
Q Consensus       380 ~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~d--g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~~~~~l  454 (504)
                      +.. ...... ....+......++|+|||++|+++..+  +.|.+|++.  +++......... ...+..++|+||+++|
T Consensus       243 g~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l  320 (361)
T 3scy_A          243 GML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYL  320 (361)
T ss_dssp             TEE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEE
T ss_pred             Cce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEE
Confidence            321 111111 112233456799999999999777655  889999986  344333333333 4457789999999999


Q ss_pred             EEee-CCCcEEEEE--cCCcceEEEE-eecCCceEEEEEc
Q psy17188        455 FSCC-SDGNIAVWD--LHNQTLVRQF-QGHTDGASCIDIS  490 (504)
Q Consensus       455 ~s~~-~dg~i~iwd--~~~~~~~~~~-~~h~~~v~~~~~s  490 (504)
                      ++++ .++.|.+|+  .+++++.... ..+...+.|+.|.
T Consensus       321 ~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          321 LVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             EEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             EEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence            8887 578899965  4567665443 2345678999886

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.93  E-value=1.8e-24  Score=199.49  Aligned_cols=277  Identities=17%  Similarity=0.214  Sum_probs=195.1

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCC-ceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccceeeeec-
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDN-YIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTS-  201 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~-  201 (504)
                      +++++++ ++.|.+||..+++.   +..+.. ++.. .+.+++|+|++++++ ++..++.|.+||+.+++......... 
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~   77 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAV---DKVITI-ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEE---EEEEEC-TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred             cEEEEcCCCCeEEEEECCCCcE---EEEEEc-CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence            3566666 99999999987532   222221 2222 478999999998765 55567899999998776432222222 


Q ss_pred             --CcCceEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        202 --SAPACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       202 --~~~~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                        +...+..++|+|++++|+++.            .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++  ++
T Consensus        78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~  154 (337)
T 1pby_B           78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GR  154 (337)
T ss_dssp             TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SS
T ss_pred             ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CC
Confidence              122467899999999888886            579999999999998888774 5568889999999988887  68


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-----------------------
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----------------------  324 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------  324 (504)
                      .|.+||+.+++... .+.            ......   .+.|+|+++.+++....+                       
T Consensus       155 ~i~~~d~~~~~~~~-~~~------------~~~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (337)
T 1pby_B          155 DLHVMDPEAGTLVE-DKP------------IQSWEA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR  218 (337)
T ss_dssp             SEEEEETTTTEEEE-EEC------------STTTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred             eEEEEECCCCcEee-eee------------ccccCC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence            89999999887531 111            000011   125678877665544322                       


Q ss_pred             -cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188        325 -NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  403 (504)
Q Consensus       325 -~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~  403 (504)
                       .|.+||+.+++.. ......+...+..++|+|+++.  ++++  ++.|.+||+........      ......+.+++|
T Consensus       219 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~--l~~~--~~~v~~~d~~~~~~~~~------~~~~~~~~~~~~  287 (337)
T 1pby_B          219 TGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR--AFGA--YNVLESFDLEKNASIKR------VPLPHSYYSVNV  287 (337)
T ss_dssp             EEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE--EEEE--ESEEEEEETTTTEEEEE------EECSSCCCEEEE
T ss_pred             cceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE--EEEe--CCeEEEEECCCCcCcce------ecCCCceeeEEE
Confidence             4689999887654 4445556667889999999984  4444  79999999876432211      122345679999


Q ss_pred             cCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       404 s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      +|+|++|++++.++.|++||+.+++........
T Consensus       288 s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~  320 (337)
T 1pby_B          288 STDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             CTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             CCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence            999999999999999999999988765554443

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.93  E-value=1.8e-23  Score=193.56  Aligned_cols=280  Identities=13%  Similarity=0.171  Sum_probs=188.8

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---CCcEEEEeCCCCCccceeeeecCcCceEEE
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRIKAELTSSAPACYAL  209 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~  209 (504)
                      ++.|.+|+++...  ..+..+....+...+..++|+|||+ |++++.   ++.|.+|++.+++......+..+...+..+
T Consensus        15 ~~~i~v~~~d~~t--g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~   91 (347)
T 3hfq_A           15 SQGIYQGTLDTTA--KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV   91 (347)
T ss_dssp             CCEEEEEEEETTT--TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred             CCCEEEEEEcCCC--CeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence            5678888876521  1222222234556788899999999 555543   689999999766544444545566778899


Q ss_pred             EECCCCCEEEEEe-CCCcEEEEECC-CC--eEEEeecC---------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECC-
Q psy17188        210 AISPDSKVCFSCC-SDGNIAVWDLH-NQ--TLVRQFQG---------HTDGASCIDISADGTKLWTGGLDNTVRSWDLR-  275 (504)
Q Consensus       210 ~~s~~~~~l~~~~-~dg~i~iwd~~-~~--~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~-  275 (504)
                      +|+|++++|++++ .++.|.+|++. ++  +.+..+..         +...+.+++|+|+++++++...++.|++|++. 
T Consensus        92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~  171 (347)
T 3hfq_A           92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD  171 (347)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence            9999999888887 67899999996 22  33333321         12348899999999977777778999999998 


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEeCCC--CCccceeeeccCC------
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLAS--PTPRIKAELTSSA------  346 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d~~~--~~~~~~~~~~~~~------  346 (504)
                      ++++....           .. .......+..++|+|+|+++++ ...++.+.+|++..  ++...........      
T Consensus       172 ~g~~~~~~-----------~~-~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~  239 (347)
T 3hfq_A          172 AGQLSEQS-----------VL-TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH  239 (347)
T ss_dssp             TSCEEEEE-----------EE-ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred             CCcEEEee-----------eE-EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence            55543211           00 1112335678999999997666 45678999999875  3222222222222      


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-CcEEEeeC-
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDL-  424 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~i~iwd~-  424 (504)
                      ..+..++|+|+++. ++++...++.|.+|++...........  ...+...+..++|+|||++|++++.+ +.|.+|++ 
T Consensus       240 ~~~~~i~~spdG~~-l~v~~~~~~~v~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          240 NGAAAIRLSHDGHF-LYVSNRGYNTLAVFAVTADGHLTLIQQ--ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             CEEEEEEECTTSCE-EEEEEETTTEEEEEEECGGGCEEEEEE--EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CcceeEEECCCCCE-EEEEeCCCCEEEEEEECCCCcEEEeEE--EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence            35788999999985 446666789999999874322111211  12234557799999999998888764 88999954 


Q ss_pred             -CCCCcc
Q psy17188        425 -ASPTPR  430 (504)
Q Consensus       425 -~~~~~~  430 (504)
                       .+++..
T Consensus       317 ~~tg~l~  323 (347)
T 3hfq_A          317 LTSGKLS  323 (347)
T ss_dssp             TTTCCEE
T ss_pred             CCCCeEE
Confidence             445433

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.92  E-value=6.6e-24  Score=216.30  Aligned_cols=318  Identities=12%  Similarity=0.031  Sum_probs=209.3

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC---ceEEEEECCCCCEEEEEeC---------CCcEEEEE
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCS---------DGNIAVWD  231 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~---------dg~i~iwd  231 (504)
                      +++|+||+++++++ .|++|++||+.+++.  ...+..+..   .+.+++|||||++|++++.         ++.|++||
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQS--YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCE--EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcE--EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            77999999665554 699999999998764  333333332   3889999999999998876         78999999


Q ss_pred             CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC---------
Q psy17188        232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD---------  302 (504)
Q Consensus       232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  302 (504)
                      +.+++.+.... ....+..++|+|||+.|+++. |+.|++||+.+++.....  ..+..    .....++.         
T Consensus        97 ~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~--~~~~~----~~v~~g~~~~v~~ee~~  168 (719)
T 1z68_A           97 LSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT--FNGRE----NKIFNGIPDWVYEEEML  168 (719)
T ss_dssp             TTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--CCCBT----TTEEESSCCHHHHHHTT
T ss_pred             CCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe--cCCCc----CCeEcccccceeeeecc
Confidence            99998732111 235688999999999999886 789999999888643211  00000    00001111         


Q ss_pred             CceEEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCCcc---ce---eee
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEAS----------------------------------NLSIWDLASPTPR---IK---AEL  342 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~---~~---~~~  342 (504)
                      ....+++|+|||++|++++.|.                                  .|++||+.+++..   ..   ..+
T Consensus       169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~  248 (719)
T 1z68_A          169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI  248 (719)
T ss_dssp             CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred             cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence            1225899999999999987542                                  7889999876431   11   112


Q ss_pred             ccCCCceeeEEECCCCCCceeeecc--CC--CeEEEEe----cCCCCCCCcccccccccCCCceE-----EEEEcCCCCE
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHH--YK--SCVKVWD----ISQPGSKTPVSQLDCLQRDNYIR-----SVKLLPDGRT  409 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~--~~i~i~d----~~~~~~~~~~~~~~~~~~~~~i~-----~~~~s~~g~~  409 (504)
                      ..+...+..++|+||++  ++++..  .+  ..|.+||    ..++....... .....+...+.     .++|+|||+.
T Consensus       249 ~~~~~~~~~~~~SpD~~--~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~  325 (719)
T 1z68_A          249 ASSDYYFSWLTWVTDER--VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE-HIEESRTGWAGGFFVSTPVFSYDAIS  325 (719)
T ss_dssp             HTSCEEEEEEEESSSSE--EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE-EEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred             CCCcceEEEeEEeCCCe--EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe-cccccCCceEccccCCccEECCCCCe
Confidence            35677889999999965  444422  22  3588888    55443222211 00023444555     7899999996


Q ss_pred             EEE--eeCCC--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCC-----CcEEEEEcCC--cc-eEEEE
Q psy17188        410 LIV--GGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHN--QT-LVRQF  477 (504)
Q Consensus       410 l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~-~~~~~  477 (504)
                      |+.  ...+|  .|++||+.+++..   .+..+...+..+.++ +++.|+..+.+     +..++|.+..  +. ....+
T Consensus       326 l~~~~~~~~g~~~l~~~~~~~~~~~---~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l  401 (719)
T 1z68_A          326 YYKIFSDKDGYKHIHYIKDTVENAI---QITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCV  401 (719)
T ss_dssp             EEEEEECTTSCEEEEEESSCSTTCE---ECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEES
T ss_pred             EEEEEEccCCceEEEEEECCCCceE---ecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceec
Confidence            654  44455  4777787765522   233344557777777 88877766654     7888998754  42 12333


Q ss_pred             e----ecCCceEEEEEccCCCEEEEe
Q psy17188        478 Q----GHTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       478 ~----~h~~~v~~~~~s~d~~~l~s~  499 (504)
                      .    +|...+..+.|+||+++++..
T Consensus       402 ~~~~~~~~~~~~~~~~s~dg~~l~~~  427 (719)
T 1z68_A          402 TCHLRKERCQYYTASFSDYAKYYALV  427 (719)
T ss_dssp             STTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred             cCccCCCCCceEEEEECCCCCEEEEE
Confidence            3    255678899999999887753

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.92  E-value=1.1e-22  Score=207.22  Aligned_cols=352  Identities=14%  Similarity=0.103  Sum_probs=211.8

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC---------CcEE
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLS  184 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~  184 (504)
                      ....+++|+||+++++++ |+.|++||+.+++....+..............++|||||++|++++.+         +.+.
T Consensus        17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~   95 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             ccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence            345689999999999987 999999999887532221110000111123458999999999998865         5677


Q ss_pred             EEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-cCCCCCe---------------
Q psy17188        185 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGA---------------  248 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v---------------  248 (504)
                      +||+.+++.   ..+..+...+...+|||||+.|+.+. ++.|++|++.+++..+.. .++...+               
T Consensus        96 ~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~  171 (740)
T 4a5s_A           96 IYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (740)
T ss_dssp             EEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence            999998763   33566677899999999999999884 689999999988755432 2332222               


Q ss_pred             --EEEEEccCCCEEEEEcCCCe-EEEEECC---C--------------------C--ceEEEeecC---CCCCCCcccce
Q psy17188        249 --SCIDISADGTKLWTGGLDNT-VRSWDLR---E--------------------G--CVKVWDISQ---PGSKTPVSQLD  297 (504)
Q Consensus       249 --~~~~~~~~~~~l~s~~~dg~-i~~wd~~---~--------------------~--~~~~~~~~~---~~~~~~~~~~~  297 (504)
                        ..+.|+|||+.|+..+.|.+ +.+|++.   .                    .  ++.+|++..   ...... ..+.
T Consensus       172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~-~~l~  250 (740)
T 4a5s_A          172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS-IQIT  250 (740)
T ss_dssp             SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE-EEEC
T ss_pred             CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE-EEec
Confidence              34899999999998765433 4444321   0                    0  122222222   100000 0111


Q ss_pred             e----cccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCC----ccceeee--ccCCCce-----eeEEECCCC
Q psy17188        298 C----LQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPT----PRIKAEL--TSSAPAC-----YALAISPDS  358 (504)
Q Consensus       298 ~----~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~----~~~~~~~--~~~~~~i-----~~~~~~~~~  358 (504)
                      .    ..+...+..++|+|||+.++....    +..|.+||+.+++    ......+  ..+...+     ....|+||+
T Consensus       251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG  330 (740)
T 4a5s_A          251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG  330 (740)
T ss_dssp             CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred             CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence            0    126677899999999997665532    2369999998875    2222222  3343333     378899999


Q ss_pred             CCceeeeccCC--CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEe--eCCCCCc
Q psy17188        359 KSPFFSSHHYK--SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW--DLASPTP  429 (504)
Q Consensus       359 ~~~~~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iw--d~~~~~~  429 (504)
                      +.+++.....+  ..|.+||....... .+     ......+..+.. +|++.|+..+..     +...||  ++..+..
T Consensus       331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~-~l-----T~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~  403 (740)
T 4a5s_A          331 NSFYKIISNEEGYRHICYFQIDKKDCT-FI-----TKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK  403 (740)
T ss_dssp             SEEEEEEECTTSCEEEEEEETTCSSCE-ES-----CCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred             CEEEEEEEcCCCceEEEEEECCCCceE-ec-----ccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence            96442343344  46777887653221 11     122334444432 446655544432     334454  4443322


Q ss_pred             ceeecc--cCCCCceeEEEECCCCCEEEEeeCC---CcEEEEEcCCcceEEEEe
Q psy17188        430 RIKAEL--TSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       430 ~~~~~~--~~~~~~v~~l~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~  478 (504)
                      ......  ...........|+|++++++.....   ..+.+++..+++.+..+.
T Consensus       404 ~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~  457 (740)
T 4a5s_A          404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE  457 (740)
T ss_dssp             EEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred             ceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence            111111  1223457788999999988755433   468888888776655443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.92  E-value=6.9e-23  Score=189.90  Aligned_cols=280  Identities=16%  Similarity=0.153  Sum_probs=194.2

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCc-CceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEee
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      .++++++++++++++.+++|++||+.+++.  ...+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~   81 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA   81 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence            346788889999999999999999987654  23333222 2467899999998665 4556889999999999988777


Q ss_pred             cCCC------CCeEEEEEccCCCEEEEEcCC------------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        242 QGHT------DGASCIDISADGTKLWTGGLD------------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       242 ~~h~------~~v~~~~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      ..+.      ..+.+++|+|+|++|++++.+            +.|.+||+.+++...             ......+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-------------~~~~~~~~~  148 (349)
T 1jmx_B           82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-------------PVRTFPMPR  148 (349)
T ss_dssp             ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-------------CSEEEECCS
T ss_pred             EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc-------------eeeeccCCC
Confidence            6332      237889999999999998865            899999998754210             122223344


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC----------------------ceeeEEECCCCCCc
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP----------------------ACYALAISPDSKSP  361 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~----------------------~i~~~~~~~~~~~~  361 (504)
                      .+.+++|+|+|+ +++++.  .|.+||..+++............                      ....+++++++...
T Consensus       149 ~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  225 (349)
T 1jmx_B          149 QVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD  225 (349)
T ss_dssp             SCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred             cccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC
Confidence            688899999999 666543  49999998775333222111000                      23345555543211


Q ss_pred             ---------eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        362 ---------FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       362 ---------~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                               ++.....++.++++++.              .....+..++|+| ++++++++  ++.|.+||+.+++...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~  289 (349)
T 1jmx_B          226 PATADLLYGYLSVDLKTGKTHTQEFA--------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK  289 (349)
T ss_dssp             -CCCEEEEEEEEEETTTCCEEEEEEE--------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred             ccccccceeEEEEeccCCcEEecccc--------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence                     11122333444554442              2345677999999 99999988  8899999999876544


Q ss_pred             eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  480 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h  480 (504)
                      .....   ..+..++|+||+++|++++.++.|++||+++++.+..+...
T Consensus       290 ~~~~~---~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          290 AANLD---HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EEECS---SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             EEcCC---CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            44322   24678899999999988888999999999999998888754

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.92  E-value=6e-22  Score=184.45  Aligned_cols=297  Identities=13%  Similarity=0.145  Sum_probs=191.3

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC----CcEEEEeCCCC--CccceeeeecCcCce
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASP--TPRIKAELTSSAPAC  206 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~--~~~~~~~~~~~~~~v  206 (504)
                      ++.|.+|+++....  .+..+... +...+..++|+||+++|++++.+    +.|.+|++...  +.........+....
T Consensus        26 ~~~i~~~~~d~~~g--~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p  102 (361)
T 3scy_A           26 SKGIYTFRFNEETG--ESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP  102 (361)
T ss_dssp             CCEEEEEEEETTTC--CEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred             CCCEEEEEEeCCCC--CEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence            67899998754211  12222222 56778889999999999998875    79999998753  333333344455567


Q ss_pred             EEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEee------c--------CCCCCeEEEEEccCCCEEEEEc-CCCeEE
Q psy17188        207 YALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQF------Q--------GHTDGASCIDISADGTKLWTGG-LDNTVR  270 (504)
Q Consensus       207 ~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~--------~h~~~v~~~~~~~~~~~l~s~~-~dg~i~  270 (504)
                      ..+++  ++++|++++ .++.|.+|++.....+..+      .        .+...+.+++|+|+|++|++++ .++.|.
T Consensus       103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~  180 (361)
T 3scy_A          103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH  180 (361)
T ss_dssp             EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence            77888  777777766 5789999999754332221      1        1233468899999999665554 588999


Q ss_pred             EEECCCCc-------eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeee
Q psy17188        271 SWDLREGC-------VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       271 ~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      +|++....       +....         ............+..++|+|+|+++++++ .++.|.+|++.+++.......
T Consensus       181 v~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~  251 (361)
T 3scy_A          181 KFNINPNANADNKEKFLTKG---------TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV  251 (361)
T ss_dssp             EEEECTTCCTTTCCCCEEEE---------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred             EEEEcCCCCcccccceeecc---------cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence            99887543       11000         00011123345578999999999888777 589999999986543333322


Q ss_pred             c---cCCCceeeEEECCCCCCceeeeccC-CCeEEEEecCCC-CCCCcccccccccCCCceEEEEEcCCCCEEEEee-CC
Q psy17188        343 T---SSAPACYALAISPDSKSPFFSSHHY-KSCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EA  416 (504)
Q Consensus       343 ~---~~~~~i~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~d  416 (504)
                      .   .+......++|+||++. ++++... ++.|.+|++... ..........   ....+..++|+|||++|++++ .+
T Consensus       252 ~~~~~~~~~~~~i~~spdg~~-l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~g~~~~~~~~spdg~~l~~~~~~~  327 (361)
T 3scy_A          252 AADTVNAQGSGDIHLSPDGKY-LYASNRLKADGVAIFKVDETNGTLTKVGYQL---TGIHPRNFIITPNGKYLLVACRDT  327 (361)
T ss_dssp             ESCSSCCCCEEEEEECTTSSE-EEEEECSSSCEEEEEEECTTTCCEEEEEEEE---CSSCCCEEEECTTSCEEEEEETTT
T ss_pred             ecCCCCCCCcccEEECCCCCE-EEEECCCCCCEEEEEEEcCCCCcEEEeeEec---CCCCCceEEECCCCCEEEEEECCC
Confidence            2   22334679999999995 3344555 689999999632 1211222111   145677999999999998887 56


Q ss_pred             CcEEEeeCC--CCCcceeecccCCCCceeEEEEC
Q psy17188        417 SNLSIWDLA--SPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       417 g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      +.|.+|+++  +++..... ...+...+.|+.|.
T Consensus       328 ~~v~v~~~d~~~g~~~~~~-~~~~~~~p~~v~~~  360 (361)
T 3scy_A          328 NVIQIFERDQATGLLTDIK-KDIKVDKPVCLKFV  360 (361)
T ss_dssp             TEEEEEEECTTTCCEEECS-CCEECSSEEEEEEE
T ss_pred             CCEEEEEEECCCCcEeecc-eeeeCCCCeEEEEc
Confidence            889996554  44433221 12233457788775

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.92  E-value=1.3e-23  Score=208.70  Aligned_cols=261  Identities=11%  Similarity=0.096  Sum_probs=188.5

Q ss_pred             cCceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCC--
Q psy17188        203 APACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLRE--  276 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~--  276 (504)
                      ..+|++++|+|||+.|++++. ||++.||++++++..+....+...+..+.|+|| +.+++++.   +...++|.+..  
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~   99 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR   99 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence            556999999999999999887 999999999777765544434368999999999 77777765   45455554432  


Q ss_pred             -CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        277 -GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                       +..               .  ...........+|+|+++. +++...++.+.+||+.+++......   +..  .+++|
T Consensus       100 ~g~~---------------~--~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~---~~~--~~~~~  157 (582)
T 3o4h_A          100 PGEE---------------Q--RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR---LPG--FGFVS  157 (582)
T ss_dssp             TTCC---------------E--ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE---ESS--CEEEE
T ss_pred             CCcc---------------c--cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec---CCC--ceEEE
Confidence             211               1  1111222345688888753 3444455566699998774333222   222  78999


Q ss_pred             CCCCCCceeeeccCC----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC--cEEEeeCCCCC
Q psy17188        355 SPDSKSPFFSSHHYK----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPT  428 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg--~i~iwd~~~~~  428 (504)
                      +|||+  .++.++.+    ..|++||+..+...      ....+...+..++|||||++|+++..++  .|++||+.+++
T Consensus       158 spDG~--~la~~~~~~~~~~~i~~~d~~~g~~~------~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~  229 (582)
T 3o4h_A          158 DIRGD--LIAGLGFFGGGRVSLFTSNLSSGGLR------VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS  229 (582)
T ss_dssp             EEETT--EEEEEEEEETTEEEEEEEETTTCCCE------EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred             CCCCC--EEEEEEEcCCCCeEEEEEcCCCCCce------EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence            99999  55555544    77999998765432      1234567789999999999999888888  89999999876


Q ss_pred             cceeecccCCCCceeEEE--------ECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        429 PRIKAELTSSAPACYALA--------ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       429 ~~~~~~~~~~~~~v~~l~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ..   ....+...+..++        |+|||.++++++.|+.+++|++  ++.+.   .+.+.+.+++|+ |++++++++
T Consensus       230 ~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s  300 (582)
T 3o4h_A          230 VE---DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHT  300 (582)
T ss_dssp             EE---ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred             EE---EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEc
Confidence            54   3445555566666        9999999999999999999999  66554   345678999999 999999988


Q ss_pred             CCC
Q psy17188        501 LDN  503 (504)
Q Consensus       501 ~Dg  503 (504)
                      .+.
T Consensus       301 ~~~  303 (582)
T 3o4h_A          301 SLS  303 (582)
T ss_dssp             ETT
T ss_pred             CCC
Confidence            765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=2.8e-22  Score=190.05  Aligned_cols=261  Identities=11%  Similarity=0.042  Sum_probs=175.3

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCc--------cce-----eeee
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP--------RIK-----AELT  200 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--------~~~-----~~~~  200 (504)
                      +.+++|+....            .....++.+++++++.++++++.++ +++|+......        ...     ....
T Consensus        23 ~~vri~~~~~~------------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (434)
T 2oit_A           23 KKVRIFDSPEE------------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV   89 (434)
T ss_dssp             CEEECSCCCSS------------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE
T ss_pred             eeEEecCCccc------------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc
Confidence            57888874210            1234578999999999999998887 88887531100        000     0112


Q ss_pred             cCcCceEEEEECCCCCEEE----EEeCCCcEEEEECCCC-----------eEEEeecCCCCCeEEEEEccC-CCEEEEEc
Q psy17188        201 SSAPACYALAISPDSKVCF----SCCSDGNIAVWDLHNQ-----------TLVRQFQGHTDGASCIDISAD-GTKLWTGG  264 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~----~~~~dg~i~iwd~~~~-----------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~  264 (504)
                      .+...|.+++|+|++++|+    +++.|+.|++||++++           ..+..+.+|...|.+++|+|+ +++|++++
T Consensus        90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s  169 (434)
T 2oit_A           90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL  169 (434)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence            3456799999999999999    7888999999998754           125667789999999999997 78999999


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec-
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-  343 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-  343 (504)
                      .||+|++||++++..               ......|...+.+++|+|+|++|++++.||.|++||.+ ++........ 
T Consensus       170 ~Dg~v~iwD~~~~~~---------------~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~  233 (434)
T 2oit_A          170 ADGSIAVLQVTETVK---------------VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP  233 (434)
T ss_dssp             TTSCEEEEEESSSEE---------------EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT
T ss_pred             CCCeEEEEEcCCCcc---------------eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc
Confidence            999999999998753               22233467789999999999999999999999999998 3222211111 


Q ss_pred             ----cCCCceeeEEECCCCCCceeeeccCC------CeEEEEecCCCCCCCcc--cccccc-----cCCCceEEEEEcCC
Q psy17188        344 ----SSAPACYALAISPDSKSPFFSSHHYK------SCVKVWDISQPGSKTPV--SQLDCL-----QRDNYIRSVKLLPD  406 (504)
Q Consensus       344 ----~~~~~i~~~~~~~~~~~~~~~~~~~~------~~i~i~d~~~~~~~~~~--~~~~~~-----~~~~~i~~~~~s~~  406 (504)
                          .|...+.+++|++++.. +++....+      ..+++|+++........  ......     ....+-..+..-++
T Consensus       234 ~~~~~~~~~v~~v~w~~~~~~-l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~d  312 (434)
T 2oit_A          234 FYESDHPVRVLDVLWIGTYVF-AIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEE  312 (434)
T ss_dssp             TCCTTSCEEEEEEEEEETTEE-EEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGG
T ss_pred             ccCCCCceeEEEEEEecCceE-EEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhcc
Confidence                12347899999987752 22223233      24999999865322111  111100     11222223444467


Q ss_pred             CCEEEEeeC-CCcEEEeeC
Q psy17188        407 GRTLIVGGE-ASNLSIWDL  424 (504)
Q Consensus       407 g~~l~~~~~-dg~i~iwd~  424 (504)
                      .+++++++. .+.|.++..
T Consensus       313 w~l~~v~s~~s~dv~vl~~  331 (434)
T 2oit_A          313 WDLVLAASAASTEVSILAR  331 (434)
T ss_dssp             GTEEEEEETTCSBCEEEEE
T ss_pred             CCEEEEecCCCCceeEEEe
Confidence            677666544 344555553

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.91  E-value=7.3e-23  Score=203.19  Aligned_cols=270  Identities=12%  Similarity=0.070  Sum_probs=194.7

Q ss_pred             CCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCC-CceEEEEEccCCCEEEEecC---CCcEEE
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVGGE---ASNLSI  185 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~i  185 (504)
                      +..+|.+++|+|||+.||+++  |++++||+++++.    ...  ...+. ..+.+++|+|| +.+++++.   +....+
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~----~~~--lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l   92 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE----TVK--LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHAL   92 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE----EEE--CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEE
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC----cEe--eecccccccccccCCCC-eEEEEeccCCCCcceEE
Confidence            356799999999999999766  8999999985532    122  22444 68999999999 77776654   455566


Q ss_pred             EeCCC--CCccceeeeecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188        186 WDLAS--PTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       186 w~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      |.+..  .... . .+.... .+...+|+|+++ .+++...++.+.+||+.+++.......+.   .+++|+|||++|++
T Consensus        93 ~~~~~~~~g~~-~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~  166 (582)
T 3o4h_A           93 FKVNTSRPGEE-Q-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAG  166 (582)
T ss_dssp             EEEETTSTTCC-E-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEE
T ss_pred             EEEeccCCCcc-c-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEE
Confidence            55543  2211 1 222222 234568888876 33344445556699999988766555333   78999999999998


Q ss_pred             EcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCc
Q psy17188        263 GGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTP  336 (504)
Q Consensus       263 ~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~  336 (504)
                      ++.|    +.|++||+.+++.+                ....+...+..++|+|||+.|+++..++  .|++||+.+++.
T Consensus       167 ~~~~~~~~~~i~~~d~~~g~~~----------------~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~  230 (582)
T 3o4h_A          167 LGFFGGGRVSLFTSNLSSGGLR----------------VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV  230 (582)
T ss_dssp             EEEEETTEEEEEEEETTTCCCE----------------EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred             EEEcCCCCeEEEEEcCCCCCce----------------EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence            8877    78999999988742                3345567789999999999999888888  899999988754


Q ss_pred             cceeeeccCCCceeeEE--------ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCC
Q psy17188        337 RIKAELTSSAPACYALA--------ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  408 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~  408 (504)
                      .   .+..+...+..++        |+||+.  ++++++.++.+++|++  +....        .....+.+++|+ +++
T Consensus       231 ~---~~~~~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~--g~~~~--------~~~~~v~~~~~s-dg~  294 (582)
T 3o4h_A          231 E---DLELPSKDFSSYRPTAITWLGYLPDGR--LAVVARREGRSAVFID--GERVE--------APQGNHGRVVLW-RGK  294 (582)
T ss_dssp             E---ECCCSCSHHHHHCCSEEEEEEECTTSC--EEEEEEETTEEEEEET--TEEEC--------CCSSEEEEEEEE-TTE
T ss_pred             E---EccCCCcChhhhhhccccceeEcCCCc--EEEEEEcCCcEEEEEE--CCeec--------cCCCceEEEEec-CCE
Confidence            3   4555666677677        999994  8888899999999998  21111        123568899999 999


Q ss_pred             EEEEeeCCCc---EEEeeCCC
Q psy17188        409 TLIVGGEASN---LSIWDLAS  426 (504)
Q Consensus       409 ~l~~~~~dg~---i~iwd~~~  426 (504)
                      ++++++.+..   +++||..+
T Consensus       295 ~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          295 LVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEEEEEETTEEEEEEEETTCC
T ss_pred             EEEEEcCCCCCCeEEEEcCCC
Confidence            9988877754   77777653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=3.7e-22  Score=189.24  Aligned_cols=213  Identities=17%  Similarity=0.135  Sum_probs=156.8

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCC-------CCCce---eeeeecCCCCceEEEEEccCCCEEE----EecC
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPG-------SKTPV---SQLDCLQRDNYIRSVKLLPDGRTLI----VGGE  179 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~-------~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~----~~~~  179 (504)
                      ..+..+++++++.++++++...+++|+.....       ....+   .......+...|.+++|+|++++|+    +++.
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~  116 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY  116 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred             CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence            45788999999999998883349998753210       00111   1111224567899999999999999    7889


Q ss_pred             CCcEEEEeCCCC-----Cc-c---ceeeeecCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        180 ASNLSIWDLASP-----TP-R---IKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       180 dg~i~iw~~~~~-----~~-~---~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      |+.|+|||+.+.     +. +   ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|...|.
T Consensus       117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~  196 (434)
T 2oit_A          117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT  196 (434)
T ss_dssp             EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred             CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence            999999998653     11 1   13445678999999999997 78999999999999999999987777777999999


Q ss_pred             EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCC----
Q psy17188        250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEAS----  324 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg----  324 (504)
                      +++|+|+|++|++++.||+|++||++..........         ......+...+.+++|++++.++++. ..+|    
T Consensus       197 ~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~  267 (434)
T 2oit_A          197 SVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCP---------PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET  267 (434)
T ss_dssp             EEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCC---------TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred             EEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCC---------cccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence            999999999999999999999999983222111100         00001233479999999988777553 3343    


Q ss_pred             --cEEEEeCCCCC
Q psy17188        325 --NLSIWDLASPT  335 (504)
Q Consensus       325 --~i~v~d~~~~~  335 (504)
                        .+++|++.+..
T Consensus       268 ~~~v~i~~l~~~~  280 (434)
T 2oit_A          268 SPDVVMALLPKKE  280 (434)
T ss_dssp             CCEEEEEECCCTT
T ss_pred             CCceEEEEeccCC
Confidence              38999998653

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.90  E-value=3.2e-22  Score=185.39  Aligned_cols=299  Identities=16%  Similarity=0.201  Sum_probs=182.2

Q ss_pred             EEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccc
Q psy17188        118 AVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRI  195 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~  195 (504)
                      .++++++++++++++ ++.|++||..+++.   ...+.. +....+..++|+|++++++ +...++.|.+||+.+++...
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~---~~~~~~-~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~   79 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV---YKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF   79 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEE---EEEEEC-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcE---EEEEec-CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence            456788888888877 99999999987532   222221 2222578999999998665 45578999999998765432


Q ss_pred             eeeeecC----cCceEEEEECCCCCEEEEEeCC------------CcEEEEECCCCe---EEEeecCCCCCeEEEEEccC
Q psy17188        196 KAELTSS----APACYALAISPDSKVCFSCCSD------------GNIAVWDLHNQT---LVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       196 ~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~  256 (504)
                      .......    ...+..++|+|++++|++++.+            +.|.+||+.+++   .+..+. +...+.+++|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d  158 (349)
T 1jmx_B           80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD  158 (349)
T ss_dssp             EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred             EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence            2222111    2236789999999999998865            899999998843   333344 4446889999999


Q ss_pred             CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC-------cccceeccc---CCceEEEEEcCCCCEEEEEeCCC-c
Q psy17188        257 GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP-------VSQLDCLQR---DNYIRSVKLLPDGRTLIVGGEAS-N  325 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg-~  325 (504)
                      ++ +++++.  .|.+||+.+++... .+.......+       .........   ......+++++++.......... .
T Consensus       159 g~-l~~~~~--~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  234 (349)
T 1jmx_B          159 GS-LYVAGP--DIYKMDVKTGKYTV-ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG  234 (349)
T ss_dssp             SC-EEEESS--SEEEECTTTCCEEE-EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred             Cc-EEEccC--cEEEEeCCCCceec-cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence            99 666544  49999999887532 1111100000       000000000   00234566665542111000000 1


Q ss_pred             EEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        326 LSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      +..++..+++. ...........+..++++| +++.  ++++  ++.|.+||+.+......+      .....+..++|+
T Consensus       235 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~dg~~--l~~~--~~~v~~~d~~~~~~~~~~------~~~~~~~~~~~s  303 (349)
T 1jmx_B          235 YLSVDLKTGKT-HTQEFADLTELYFTGLRSPKDPNQ--IYGV--LNRLAKYDLKQRKLIKAA------NLDHTYYCVAFD  303 (349)
T ss_dssp             EEEEETTTCCE-EEEEEEECSSCEEEEEECSSCTTE--EEEE--ESEEEEEETTTTEEEEEE------ECSSCCCEEEEC
T ss_pred             EEEEeccCCcE-EecccccCCCcceeeEecCCCCCE--EEEE--cCeEEEEECccCeEEEEE------cCCCCccceEEC
Confidence            11234433321 1112222445788999999 9884  4444  889999998764322111      123446799999


Q ss_pred             CCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      |+|++|++++.++.|++||+++++.+......
T Consensus       304 ~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          304 KKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             SSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             CCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            99999998888999999999887655544443

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.90  E-value=1.1e-21  Score=199.73  Aligned_cols=324  Identities=11%  Similarity=0.077  Sum_probs=207.3

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCc-----eEEEEECCCCCEEEEEeCC---------C
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA-----CYALAISPDSKVCFSCCSD---------G  225 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~d---------g  225 (504)
                      ....+++|+||+++++++  |++|++||+.+++..  ..+..|...     ...+.|||||++|+.++.+         +
T Consensus        17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS--VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE--EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             ccccccEECCCCcEEEEc--CCcEEEEECCCCceE--EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            346689999999988886  899999999987743  334554422     2347899999999998876         5


Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC---
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD---  302 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  302 (504)
                      .+.+||+.+++.. .+..|...+...+|+|||+.|+.+. |+.|++|++.+++.......  +..    .....++.   
T Consensus        93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~--g~~----~~~~~g~~~~v  164 (740)
T 4a5s_A           93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT--GKE----DIIYNGITDWV  164 (740)
T ss_dssp             EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC--CBT----TTEEESBCCHH
T ss_pred             EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC--CCc----cceecCccccc
Confidence            6779999999865 4666888999999999999999885 78999999988874422110  000    00000111   


Q ss_pred             ------CceEEEEEcCCCCEEEEEeCCC------------------------------------cEEEEeCCC---CCcc
Q psy17188        303 ------NYIRSVKLLPDGRTLIVGGEAS------------------------------------NLSIWDLAS---PTPR  337 (504)
Q Consensus       303 ------~~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~v~d~~~---~~~~  337 (504)
                            .....+.|||||+.|+..+.|.                                    .|++||+.+   ++..
T Consensus       165 ~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~  244 (740)
T 4a5s_A          165 YEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA  244 (740)
T ss_dssp             HHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC
T ss_pred             ccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc
Confidence                  2234689999999999875321                                    478889887   5321


Q ss_pred             ceeeec------cCCCceeeEEECCCCCCceeeec--cCCCeEEEEecCCCC----CCCcccccccccCCCceE-----E
Q psy17188        338 IKAELT------SSAPACYALAISPDSKSPFFSSH--HYKSCVKVWDISQPG----SKTPVSQLDCLQRDNYIR-----S  400 (504)
Q Consensus       338 ~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~--~~~~~i~i~d~~~~~----~~~~~~~~~~~~~~~~i~-----~  400 (504)
                      ....+.      .+...+..++|+||++..++...  ..+..|.+||+.++.    ... ...+....+...+.     .
T Consensus       245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~-~~~l~~~~~~~~v~~~~~~~  323 (740)
T 4a5s_A          245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV-ARQHIEMSTTGWVGRFRPSE  323 (740)
T ss_dssp             CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG-GGCEEEECSSSCSSSSSCCC
T ss_pred             eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE-EEEeeeccCCceEccCcCCC
Confidence            222222      26667899999999984222322  234579999998764    111 11111122333333     6


Q ss_pred             EEEcCCCCEEE-EeeC-CC--cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEE-eeC----CCcEEE--EEcC
Q psy17188        401 VKLLPDGRTLI-VGGE-AS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS-CCS----DGNIAV--WDLH  469 (504)
Q Consensus       401 ~~~s~~g~~l~-~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s-~~~----dg~i~i--wd~~  469 (504)
                      .+|+|||+.|+ ..+. +|  .|++||+.+++...+.   .....+..+.. +|++.|+. +..    .+...|  .++.
T Consensus       324 p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT---~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~  399 (740)
T 4a5s_A          324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT---KGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLI  399 (740)
T ss_dssp             CEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC---CSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETT
T ss_pred             ceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc---cCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECC
Confidence            88999999877 5553 33  5888898876544322   22334544432 34665554 433    233444  4555


Q ss_pred             CcceEEEEee----cCCceEEEEEccCCCEEEEec
Q psy17188        470 NQTLVRQFQG----HTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       470 ~~~~~~~~~~----h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      .++....+..    .......+.|+||+++++...
T Consensus       400 g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~  434 (740)
T 4a5s_A          400 DYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC  434 (740)
T ss_dssp             EEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred             CCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence            4443323331    235688999999999876543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.90  E-value=7.9e-22  Score=182.54  Aligned_cols=299  Identities=14%  Similarity=0.137  Sum_probs=196.0

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----------CCcEEEEeCCCCCccceeeeec-
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTS-  201 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~-  201 (504)
                      |+.|.+||..+++.   +..+.  .+..+  .++|+||+++|+++..          ++.|.+||..+.+......+.. 
T Consensus        30 d~~v~v~D~~t~~~---~~~i~--~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~  102 (361)
T 2oiz_A           30 ESRVHVYDYTNGKF---LGMVP--TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK  102 (361)
T ss_dssp             GCEEEEEETTTCCE---EEEEE--CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred             cCeEEEEECCCCeE---EEEec--CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence            67999999877643   22222  23333  8999999999999862          5679999998765432222211 


Q ss_pred             ---CcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEEC
Q psy17188        202 ---SAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       202 ---~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~  274 (504)
                         +......++|+|||++|+++..  ++.|.+||+++++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+.
T Consensus       103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~  180 (361)
T 2oiz_A          103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINL  180 (361)
T ss_dssp             BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred             ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence               1233567899999999998864  57899999999999888 653 2 22335677765 67888899999999998


Q ss_pred             CC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        275 RE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      .. ++... .....         ...........+.+++++..++..+.++.+.++|+........              
T Consensus       181 ~~~g~~~~-~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~--------------  236 (361)
T 2oiz_A          181 GEDGKVAS-QSRSK---------QMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVD--------------  236 (361)
T ss_dssp             CTTSSEEE-EEECC---------CCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEE--------------
T ss_pred             CCCCcEee-ecccc---------ceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceec--------------
Confidence            65 44321 00000         0000011111223356677777777888999999865421111              


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-----------CCcEEEe
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----------ASNLSIW  422 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-----------dg~i~iw  422 (504)
                                         ..|++....    ......  .......++|+|+++.++++..           .+.|.+|
T Consensus       237 -------------------~~~~~~~~~----~~~~~~--~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi  291 (361)
T 2oiz_A          237 -------------------GPWSLLNDE----DKAKNW--VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM  291 (361)
T ss_dssp             -------------------EEEESCCHH----HHHTTC--EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred             -------------------ccccccCcc----cccccc--ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence                               111110000    000000  0000113688999888877643           3479999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc--ceEEEEeecCCceEEEEEccCCC
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      |+.+.+.+.....  +.  +..++|+|||++|++++. +.|.+||..++  +++.++..+......++++|||+
T Consensus       292 D~~t~~~v~~i~~--~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          292 DTKTKQRVARIPG--RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             ETTTTEEEEEEEC--TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             ECCCCcEEEEEec--CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            9998765544443  33  788899999999998887 99999999999  99988866777889999999986

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.90  E-value=2.2e-21  Score=182.63  Aligned_cols=283  Identities=14%  Similarity=0.078  Sum_probs=190.7

Q ss_pred             eeeeecCcCceEE-----EEECCCCCEEEEEeC-CC--cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        196 KAELTSSAPACYA-----LAISPDSKVCFSCCS-DG--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       196 ~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                      ...+..+......     .+|+|||++|+.++. ++  .|.+||+.+++......++...+..+.|+||++.|+.++.++
T Consensus        23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~  102 (388)
T 3pe7_A           23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR  102 (388)
T ss_dssp             EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred             eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence            3445555554554     789999999998887 66  388899999998887777766666788999999999999999


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEE--EEEcCCCCEEEEEe----------------------CC
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRS--VKLLPDGRTLIVGG----------------------EA  323 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~----------------------~d  323 (504)
                      .|++||+.+++....               ...+...+..  ..++++++.++...                      .+
T Consensus       103 ~l~~~d~~~g~~~~~---------------~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (388)
T 3pe7_A          103 NLMRVDLATLEENVV---------------YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC  167 (388)
T ss_dssp             EEEEEETTTCCEEEE---------------EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred             eEEEEECCCCcceee---------------eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence            999999999875321               1112222322  33589999887432                      34


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECC-CCCCceeeeccC----CCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKSPFFSSHHY----KSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      ..|.+||+.+++...   +..+...+..+.|+| +++.++++....    ...|.++|.......    .+........+
T Consensus       168 ~~l~~~d~~~g~~~~---l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~  240 (388)
T 3pe7_A          168 CRLMRVDLKTGESTV---ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESC  240 (388)
T ss_dssp             EEEEEEETTTCCEEE---EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEE
T ss_pred             ceEEEEECCCCceEE---eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCccc
Confidence            679999998875332   333445688999999 998544444322    346777776543221    11111111357


Q ss_pred             EEEEEcCCCCEEEEeeC-CC----cEEEeeCCCCCcceeecccCCCCc---eeEEEECCCCCEEEEe---------eCCC
Q psy17188        399 RSVKLLPDGRTLIVGGE-AS----NLSIWDLASPTPRIKAELTSSAPA---CYALAISPDSKVCFSC---------CSDG  461 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~---v~~l~~s~~~~~l~s~---------~~dg  461 (504)
                      ...+|+|||+.|+..+. ++    .|++||+.+++.........+...   ...+.|+|||+.|+..         ..+.
T Consensus       241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~  320 (388)
T 3pe7_A          241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP  320 (388)
T ss_dssp             EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred             ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence            78899999997765443 22    399999998875544443331000   1123799999988854         4466


Q ss_pred             cEEEEEcCCcceEEEEeecCC-----------ceEEEEEccCCCEEEEecC
Q psy17188        462 NIAVWDLHNQTLVRQFQGHTD-----------GASCIDISADGTKLWTGGL  501 (504)
Q Consensus       462 ~i~iwd~~~~~~~~~~~~h~~-----------~v~~~~~s~d~~~l~s~s~  501 (504)
                      .|++||+.+++. ..+..|..           .+.+++|+|||+.|+..+.
T Consensus       321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~  370 (388)
T 3pe7_A          321 FLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD  370 (388)
T ss_dssp             EEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             EEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence            899999998765 45555665           5788999999999887764

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.89  E-value=2.8e-21  Score=179.93  Aligned_cols=284  Identities=11%  Similarity=0.123  Sum_probs=183.5

Q ss_pred             EEEEecCC--CcEEEEeCC--CCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEeecC-CC
Q psy17188        173 TLIVGGEA--SNLSIWDLA--SPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQG-HT  245 (504)
Q Consensus       173 ~l~~~~~d--g~i~iw~~~--~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~-h~  245 (504)
                      +|++|+..  +.|.+|+++  +++........ .....+..++|+|++++|++++.+ .|.+|++. +++....... ..
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~   82 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG   82 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence            35555542  468887764  33322121111 233457789999999999998888 99999997 7776544321 11


Q ss_pred             CCeEEEEEccCCCE--EEEEc-------------CCCeEEEEECCC-CceEEEeecCCCCCCCccccee--cccCCceEE
Q psy17188        246 DGASCIDISADGTK--LWTGG-------------LDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDC--LQRDNYIRS  307 (504)
Q Consensus       246 ~~v~~~~~~~~~~~--l~s~~-------------~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~  307 (504)
                      +.+.+++|+|+|++  ++++.             .++.+.+|++.. +++..             .+..  ..+...+.+
T Consensus        83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~-------------~~~~~~~~~~~~~~~  149 (365)
T 1jof_A           83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEK-------------NVQNYEYQENTGIHG  149 (365)
T ss_dssp             SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEE-------------EEEEEECCTTCCEEE
T ss_pred             CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcc-------------eEeeEEeCCCCcceE
Confidence            23566899999984  45553             689999999973 54321             1111  123467899


Q ss_pred             EEEcCCCCEEEEEeC-CCcEEEEeCC-CCCccceeeec--cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        308 VKLLPDGRTLIVGGE-ASNLSIWDLA-SPTPRIKAELT--SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~-dg~i~v~d~~-~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      ++|+|+|++|+++.. ++.|++||+. +++........  .+...+..++|+|+++. ++++...++.+.+|+++.....
T Consensus       150 ~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~~~~g~  228 (365)
T 1jof_A          150 MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY-LYALMEAGNRICEYVIDPATHM  228 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCC
T ss_pred             EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE-EEEEECCCCeEEEEEEeCCCCc
Confidence            999999998887754 6789999998 55433222332  23456899999999985 3444456789999987642111


Q ss_pred             Cc--ccccccc-----cCCC------ceEEEE-EcCCCCEEEEeeCCC------cEEEeeCC-CCCcceeec-ccCCCCc
Q psy17188        384 TP--VSQLDCL-----QRDN------YIRSVK-LLPDGRTLIVGGEAS------NLSIWDLA-SPTPRIKAE-LTSSAPA  441 (504)
Q Consensus       384 ~~--~~~~~~~-----~~~~------~i~~~~-~s~~g~~l~~~~~dg------~i~iwd~~-~~~~~~~~~-~~~~~~~  441 (504)
                      ..  .......     .+..      .+..++ |+|||++|++++.+.      .|.+|++. +++...... ...+...
T Consensus       229 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~  308 (365)
T 1jof_A          229 PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG  308 (365)
T ss_dssp             EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred             EEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence            10  0111111     1121      578999 999999988776432      79999996 444332111 2223334


Q ss_pred             eeEEEECC---CCCEEEEeeCC-CcEEEEEcCCc
Q psy17188        442 CYALAISP---DSKVCFSCCSD-GNIAVWDLHNQ  471 (504)
Q Consensus       442 v~~l~~s~---~~~~l~s~~~d-g~i~iwd~~~~  471 (504)
                      +..++|+|   ||++|++++.+ +.|.+|+++..
T Consensus       309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            55679999   89999998864 89999998766

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.89  E-value=3.8e-22  Score=187.78  Aligned_cols=282  Identities=17%  Similarity=0.170  Sum_probs=187.1

Q ss_pred             EEEccCCCEEEEecC-CCc--EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        165 VKLLPDGRTLIVGGE-ASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       165 ~~~s~~~~~l~~~~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      .+|+|||++|++++. ++.  |.+||+.+++.  ......+...+..+.|+||++.|+.++.++.|++||+.+++....+
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~  118 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY  118 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE--EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce--EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence            789999999999887 663  88889887653  3333445444556789999999999999999999999999887777


Q ss_pred             cCCCCCeEEEE--EccCCCEEEEE----------------------cCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        242 QGHTDGASCID--ISADGTKLWTG----------------------GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       242 ~~h~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      ..+...+....  +++++++++..                      ..+..|.+||+.+++...                
T Consensus       119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----------------  182 (388)
T 3pe7_A          119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV----------------  182 (388)
T ss_dssp             ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE----------------
T ss_pred             echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE----------------
Confidence            76666554444  48899888742                      245789999999887432                


Q ss_pred             ecccCCceEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCC--CceeeEEECCCCCCceeeeccC
Q psy17188        298 CLQRDNYIRSVKLLP-DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSA--PACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                      ...+...+..+.|+| +|+.|+....+      ..|.++|........   +..+.  ..+..++|+||++.+++++...
T Consensus       183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~spdg~~l~~~~~~~  259 (388)
T 3pe7_A          183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK---VKTHAEGESCTHEFWVPDGSALVYVSYLK  259 (388)
T ss_dssp             EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE---SCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred             eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE---eeeCCCCcccccceECCCCCEEEEEecCC
Confidence            223455688999999 99998887653      368888876653222   22222  3577889999999755554433


Q ss_pred             CC---eEEEEecCCCCCCCcccccccccCC-CceEEEEEcCCCCEEEEe---------eCCCcEEEeeCCCCCcceeecc
Q psy17188        369 KS---CVKVWDISQPGSKTPVSQLDCLQRD-NYIRSVKLLPDGRTLIVG---------GEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       369 ~~---~i~i~d~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      +.   .|.+||+..+.... +.......+. ......+|+|||+.|+..         ..+..|++||+.+++.......
T Consensus       260 ~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~  338 (388)
T 3pe7_A          260 GSPDRFIYSADPETLENRQ-LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARH  338 (388)
T ss_dssp             TCCCEEEEEECTTTCCEEE-EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEEC
T ss_pred             CCCcceEEEEecCCCceEE-EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccc
Confidence            32   49999998754211 1111100000 001123799999988864         4456899999987654333222


Q ss_pred             cCC--------CCceeEEEECCCCCEEEEee-CCCcEEEEEc
Q psy17188        436 TSS--------APACYALAISPDSKVCFSCC-SDGNIAVWDL  468 (504)
Q Consensus       436 ~~~--------~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~  468 (504)
                      ...        ...+..++|+|||+.|+..+ .+|...||.+
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence            210        00366779999999888665 4676666654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.87  E-value=5e-20  Score=171.43  Aligned_cols=277  Identities=13%  Similarity=0.118  Sum_probs=177.0

Q ss_pred             CeEEEEeCCCCCCCCceeeeee--cCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC-CCCccceeeeecCcCceEEEE
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALA  210 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~v~~~~  210 (504)
                      +.|.+|+++...  ..+..+..  ......+..++|+||+++|++++.+ .|.+|++. +++.........+ ....+++
T Consensus        14 ~~i~~~~~d~~~--g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~   89 (365)
T 1jof_A           14 GAIFTVQFDDEK--LTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRAND   89 (365)
T ss_dssp             CEEEEEEEETTT--TEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGC
T ss_pred             CcEEEEEEECCC--CCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEE
Confidence            578887764321  11121111  1233468899999999999998877 99999987 5543222222111 2245689


Q ss_pred             ECCCCCE--EEEEe-------------CCCcEEEEECC-CCeEEEeec----CCCCCeEEEEEccCCCEEEEEcC-CCeE
Q psy17188        211 ISPDSKV--CFSCC-------------SDGNIAVWDLH-NQTLVRQFQ----GHTDGASCIDISADGTKLWTGGL-DNTV  269 (504)
Q Consensus       211 ~s~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~-dg~i  269 (504)
                      |+|++++  ++++.             .++.+.+|++. +++....+.    .+...+.+++|+|||++|+++.. ++.|
T Consensus        90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v  169 (365)
T 1jof_A           90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKL  169 (365)
T ss_dssp             TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred             ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence            9999994  44553             68999999997 465544433    25567999999999998887654 6799


Q ss_pred             EEEECC-CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCC--CCccc----eee
Q psy17188        270 RSWDLR-EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLAS--PTPRI----KAE  341 (504)
Q Consensus       270 ~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~--~~~~~----~~~  341 (504)
                      ++||+. ++++....           ......+...+..++|+|+|+++++++. ++.+.+|++..  ++...    ...
T Consensus       170 ~~~~~~~~g~~~~~~-----------~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~  238 (365)
T 1jof_A          170 WTHRKLASGEVELVG-----------SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL  238 (365)
T ss_dssp             EEEEECTTSCEEEEE-----------EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred             EEEEECCCCCEEEee-----------eEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence            999998 67643210           1111112456889999999999988765 68899998753  32211    111


Q ss_pred             ecc----CCC------ceeeEE-ECCCCCCceeeeccCCC-----eEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188        342 LTS----SAP------ACYALA-ISPDSKSPFFSSHHYKS-----CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  405 (504)
Q Consensus       342 ~~~----~~~------~i~~~~-~~~~~~~~~~~~~~~~~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  405 (504)
                      +..    +..      .+..++ |+||++.+ +++...++     .|.+|++........... ....+...+..++|+|
T Consensus       239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l-~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~-~~~~~~~~~~~~a~sp  316 (365)
T 1jof_A          239 IPPGIPDRDPETGKGLYRADVCALTFSGKYM-FASSRANKFELQGYIAGFKLRDCGSIEKQLF-LSPTPTSGGHSNAVSP  316 (365)
T ss_dssp             SCTTCCCBCTTTSSBSEEEEEEEECTTSSEE-EEEEEESSTTSCCEEEEEEECTTSCEEEEEE-EEECSSCCTTCCCEEE
T ss_pred             CCCCcCCcccccccccccccEEEECCCCCEE-EEECCCCCCCCCCeEEEEEECCCCCEEEeee-eeecCCCCcccceecC
Confidence            111    111      478899 99999853 33332233     899999963222111000 0111233456789999


Q ss_pred             ---CCCEEEEeeCC-CcEEEeeCCCC
Q psy17188        406 ---DGRTLIVGGEA-SNLSIWDLASP  427 (504)
Q Consensus       406 ---~g~~l~~~~~d-g~i~iwd~~~~  427 (504)
                         ||++|++++.+ +.|.+|+++..
T Consensus       317 ~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          317 CPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCcCCCEEEEEEcCCCeEEEEEEchh
Confidence               89999998865 89999998754

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.87  E-value=4e-18  Score=165.39  Aligned_cols=334  Identities=14%  Similarity=0.123  Sum_probs=223.8

Q ss_pred             CCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeec
Q psy17188        123 NPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  201 (504)
Q Consensus       123 ~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  201 (504)
                      +.+.++++.. ++.|.++|..+++..   ..+.   ....+..+.|+|||+++++++.|+.|.+||+...+......+..
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~---~~i~---~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~  238 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIK---TVLD---TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI  238 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEE---EEEE---CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEE---EEEe---CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence            4455666665 899999999875332   2222   23356799999999999999999999999996222223444443


Q ss_pred             CcCceEEEEEC----CCCCEEEEEeC-CCcEEEEECCCCeEEEeecCC-----------CCCeEEEEEccCCC-EEEEEc
Q psy17188        202 SAPACYALAIS----PDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQGH-----------TDGASCIDISADGT-KLWTGG  264 (504)
Q Consensus       202 ~~~~v~~~~~s----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~~-~l~s~~  264 (504)
                      .. ....++|+    |||+++++++. +++|.++|..+.+.+..+...           ...+..+..++++. .++...
T Consensus       239 G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~  317 (567)
T 1qks_A          239 GS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK  317 (567)
T ss_dssp             CS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             CC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence            32 35789999    69998887765 589999999999888876521           12577888888755 455566


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeee-
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL-  342 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~-  342 (504)
                      .+|.|.++|....+..              .............+.|+|++++++++. .++.|.++|+.+++....... 
T Consensus       318 ~~g~v~~vd~~~~~~~--------------~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg  383 (567)
T 1qks_A          318 ETGKILLVDYTDLNNL--------------KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG  383 (567)
T ss_dssp             TTTEEEEEETTCSSEE--------------EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             CCCeEEEEecCCCccc--------------eeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence            7799999998765321              111123344577889999999987765 578899999998754433333 


Q ss_pred             ccCCCceeeEE-ECCCCCCceeeeccCCCeEEEEecCCCCC----CCcccccccccCCCceEEEEEcCCCCEEEEeeC--
Q psy17188        343 TSSAPACYALA-ISPDSKSPFFSSHHYKSCVKVWDISQPGS----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--  415 (504)
Q Consensus       343 ~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~--  415 (504)
                      .....+-.... +.|++...++.....++.|.++|......    .+.+..+...  ...-..+..+|++++|.+...  
T Consensus       384 g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~  461 (567)
T 1qks_A          384 GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLN  461 (567)
T ss_dssp             SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTC
T ss_pred             CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCC
Confidence            11111112333 57776543333334578999999876332    1122222211  122235778999999998763  


Q ss_pred             -----CCcEEEeeCCCC-----Ccc-eeec------ccCCCCceeEEEECCCCCEEEEee-----CCCcEEEEEcCCcce
Q psy17188        416 -----ASNLSIWDLASP-----TPR-IKAE------LTSSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQTL  473 (504)
Q Consensus       416 -----dg~i~iwd~~~~-----~~~-~~~~------~~~~~~~v~~l~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~  473 (504)
                           .+.|.++|+.+.     ... ....      +......+..+.|+|+|+++..+.     .++.|.|+|.+++++
T Consensus       462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~  541 (567)
T 1qks_A          462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL  541 (567)
T ss_dssp             SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred             CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceE
Confidence                 358999999866     211 1111      122345688999999999887663     378999999999999


Q ss_pred             EEEEee
Q psy17188        474 VRQFQG  479 (504)
Q Consensus       474 ~~~~~~  479 (504)
                      +.+++.
T Consensus       542 ~~~i~~  547 (567)
T 1qks_A          542 KHVIKD  547 (567)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            988874

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.86  E-value=4.4e-20  Score=186.29  Aligned_cols=297  Identities=14%  Similarity=0.119  Sum_probs=190.7

Q ss_pred             cCCCcEEEEEEcCCCcEEEEe--c-CCeEEEEeCCCCCCCCceeeeeecCCCCceE---------EEEEc--cCCCE-EE
Q psy17188        111 SHGEVVCAVTISNPTKYVYTG--G-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIR---------SVKLL--PDGRT-LI  175 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~--~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~  175 (504)
                      +|...|..+++++++.+++..  + ++...||....++.   ...+  ..+...+.         ...|+  |||++ |+
T Consensus        21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~l--~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la   95 (662)
T 3azo_A           21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---EESA--LPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV   95 (662)
T ss_dssp             HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---EEES--SCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred             hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---ccee--CCCCccccccccccCCccceeeeecCCCeEEE
Confidence            788999999999987777776  4 78899999643322   1222  23444444         55565  99998 77


Q ss_pred             EecC-CCcEEEEeCC--C-CCccceeeeec-----CcCceEEEEECCCCCEEEEEeCC----------CcEEEEECCC--
Q psy17188        176 VGGE-ASNLSIWDLA--S-PTPRIKAELTS-----SAPACYALAISPDSKVCFSCCSD----------GNIAVWDLHN--  234 (504)
Q Consensus       176 ~~~~-dg~i~iw~~~--~-~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iwd~~~--  234 (504)
                      .++. +..|+++++.  . ++.   ..+..     |...+..++|+|||+.|++++.+          ..|++||+.+  
T Consensus        96 ~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~  172 (662)
T 3azo_A           96 FTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA  172 (662)
T ss_dssp             EEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred             EEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence            7654 5667777775  2 332   23333     56678899999999999988876          5899999988  


Q ss_pred             ----CeEEEeec-CCCCCeEEEEEccCCCEEEEEcCC--------CeEEEEECC-CCceEEEeecCCCCCCCcccceecc
Q psy17188        235 ----QTLVRQFQ-GHTDGASCIDISADGTKLWTGGLD--------NTVRSWDLR-EGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       235 ----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d--------g~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                          ++.. .+. .+...+..++|+|||++|+.++.+        ..|++||+. ++.....            ......
T Consensus       173 ~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~------------~~l~~~  239 (662)
T 3azo_A          173 AADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT------------RTLLGG  239 (662)
T ss_dssp             TTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE------------EEEEEE
T ss_pred             cccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc------------EEeCCC
Confidence                5543 444 566788889999999999887755        379999998 5621100            111123


Q ss_pred             cCCceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      +...+..+.|+|||++++++..++  .|.+||+.+++..   .+..+...+....|++                      
T Consensus       240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~---~l~~~~~~~~~p~w~~----------------------  294 (662)
T 3azo_A          240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT---QLCRREEEFAGPLWTP----------------------  294 (662)
T ss_dssp             TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE---ESSCCSSBSSCCCCST----------------------
T ss_pred             CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee---ecccccccccCccccc----------------------
Confidence            356788999999999877887788  5666665443211   1111111111111111                      


Q ss_pred             CCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe--eCCCCCcceeecccCCCCceeEE-EECCCCCEEE
Q psy17188        379 QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW--DLASPTPRIKAELTSSAPACYAL-AISPDSKVCF  455 (504)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~l-~~s~~~~~l~  455 (504)
                                        .+..++|+|++++++++.. +.++||  |+.+++   ...+..+...+..+ +++.+.-+++
T Consensus       295 ------------------~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~~~~~  352 (662)
T 3azo_A          295 ------------------GMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTRAVGV  352 (662)
T ss_dssp             ------------------TCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTEEEEE
T ss_pred             ------------------cCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCEEEEE
Confidence                              1236889999999999988 999999  554443   23344455566666 4443333333


Q ss_pred             EeeCCC--cEEEEEcCCcceEE
Q psy17188        456 SCCSDG--NIAVWDLHNQTLVR  475 (504)
Q Consensus       456 s~~~dg--~i~iwd~~~~~~~~  475 (504)
                      +++.+.  .|+++|+.+++...
T Consensus       353 ~~~~~~~~~i~~~d~~~g~~~~  374 (662)
T 3azo_A          353 AASPRTAYEVVELDTVTGRART  374 (662)
T ss_dssp             EEETTEEEEEEEEETTTCCEEE
T ss_pred             EcCCCCCCEEEEEECCCCceEE
Confidence            444454  46666777776543

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.86  E-value=1.1e-20  Score=178.16  Aligned_cols=287  Identities=15%  Similarity=0.127  Sum_probs=183.5

Q ss_pred             CceEEEEEccCCCEEEEecCC---CcEEEEeCCCCCccceeeeecCcCc-eEEEEECCCCCEEEEEeCCCcEEEEECCCC
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASPTPRIKAELTSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~  235 (504)
                      ..+.+++|+|||++|+.....   ..|.+||+.+++.   ..+..+... ...+.|+||++.|+.++.++.|++||+.++
T Consensus        36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~  112 (396)
T 3c5m_A           36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA---VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL  112 (396)
T ss_dssp             CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE---EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred             eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE---EEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence            346788999999998877543   4688889887653   222333222 233789999999999999999999999988


Q ss_pred             eEEEeecCCCCCeEE-------------------EEEccCCCEEEEE-----cCCCeEEEEECCCCceEEEeecCCCCCC
Q psy17188        236 TLVRQFQGHTDGASC-------------------IDISADGTKLWTG-----GLDNTVRSWDLREGCVKVWDISQPGSKT  291 (504)
Q Consensus       236 ~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~~wd~~~~~~~~~~~~~~~~~~  291 (504)
                      +.......+......                   +.|+|+++.++..     ..+..|++||+.+++...          
T Consensus       113 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----------  182 (396)
T 3c5m_A          113 EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV----------  182 (396)
T ss_dssp             CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE----------
T ss_pred             CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe----------
Confidence            776665545443222                   3456777665544     356689999998877432          


Q ss_pred             CcccceecccCCceEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceee
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS  364 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  364 (504)
                            ...+...+..+.|+| +++.|+..+.+      ..|.+||+...+...... ......+..++|+|+++.++++
T Consensus       183 ------~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~  255 (396)
T 3c5m_A          183 ------IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYV  255 (396)
T ss_dssp             ------EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEE
T ss_pred             ------eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEE
Confidence                  123455688999999 78877776543      358888887653222211 1113357789999999964444


Q ss_pred             ecc-CC--CeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEee----------------CCCcEEEeeC
Q psy17188        365 SHH-YK--SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGG----------------EASNLSIWDL  424 (504)
Q Consensus       365 ~~~-~~--~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~----------------~dg~i~iwd~  424 (504)
                      +.. ..  +.|.+||+..+.... +..     .. ... +.|+| ||+++++++                .+..|++||+
T Consensus       256 ~~~~~~~~~~l~~~d~~~g~~~~-l~~-----~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~  327 (396)
T 3c5m_A          256 SYFKGQTDRVIYKANPETLENEE-VMV-----MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT  327 (396)
T ss_dssp             EEETTTCCEEEEEECTTTCCEEE-EEE-----CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred             ecCCCCccceEEEEECCCCCeEE-eee-----CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence            322 12  459999987643211 111     11 122 89999 999888754                2467999999


Q ss_pred             CCCCcceeecccCCC--------CceeEEEECCCCCEEEEeeC-CCcEEE--EEcCCcceE
Q psy17188        425 ASPTPRIKAELTSSA--------PACYALAISPDSKVCFSCCS-DGNIAV--WDLHNQTLV  474 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~--------~~v~~l~~s~~~~~l~s~~~-dg~i~i--wd~~~~~~~  474 (504)
                      .+++...........        ..+..++|+|||+.|+.++. ++...|  +++.+++..
T Consensus       328 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~  388 (396)
T 3c5m_A          328 KAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH  388 (396)
T ss_dssp             TTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred             ccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence            877643332211100        02455699999999887765 455444  455555443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.86  E-value=1.1e-20  Score=178.22  Aligned_cols=283  Identities=11%  Similarity=0.008  Sum_probs=181.4

Q ss_pred             eEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        206 CYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      +..++|+|||++|+.....   ..|.+||+.+++.......+......+.|+|||++|+.++.++.|++||+.+++....
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~  117 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI  117 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence            5678999999988877543   3688999998887655443333333478999999999999999999999998875432


Q ss_pred             eecCCCCCCCcccceecccCCce-----EEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYI-----RSVKLLPDGRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~-----~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      ...... ..+.............     ..+.|+|+++.++..     ..+..|.+||+.+++.....   .+...+..+
T Consensus       118 ~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~  193 (396)
T 3c5m_A          118 YTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHP  193 (396)
T ss_dssp             EECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEE
T ss_pred             Eecccc-cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccc
Confidence            211100 0000000000000000     003567888776654     35568999999876533322   345578899


Q ss_pred             EECC-CCCCceeeeccCC----CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEe
Q psy17188        353 AISP-DSKSPFFSSHHYK----SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW  422 (504)
Q Consensus       353 ~~~~-~~~~~~~~~~~~~----~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iw  422 (504)
                      .|+| +++.+++++....    ..|.+||+......    .+........+..++|+|||++|+..+.+     +.|++|
T Consensus       194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  269 (396)
T 3c5m_A          194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA  269 (396)
T ss_dssp             EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred             eECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence            9999 7775444443222    46888887643211    11111113357789999999988776543     349999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECC-CCCEEEEee----------------CCCcEEEEEcCCcceEEEEeecCC---
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISP-DSKVCFSCC----------------SDGNIAVWDLHNQTLVRQFQGHTD---  482 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~h~~---  482 (504)
                      |+.+++.........    .. +.|+| |++++++++                .+..|++||+.+++. ..+..+..   
T Consensus       270 d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~  343 (396)
T 3c5m_A          270 NPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWD  343 (396)
T ss_dssp             CTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCC
T ss_pred             ECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccc
Confidence            998876544433322    22 79999 999888754                347899999988875 34555554   


Q ss_pred             --------ceEEEEEccCCCEEEEecCC
Q psy17188        483 --------GASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       483 --------~v~~~~~s~d~~~l~s~s~D  502 (504)
                              .+..+.|+|||+.|+.++.+
T Consensus       344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~~  371 (396)
T 3c5m_A          344 VLDGDRQITHPHPSFTPNDDGVLFTSDF  371 (396)
T ss_dssp             CBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred             cccccccCCCCCceEccCCCeEEEEecC
Confidence                    25678999999999887753

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.83  E-value=1.3e-19  Score=182.85  Aligned_cols=292  Identities=11%  Similarity=0.034  Sum_probs=179.8

Q ss_pred             CCcceEEEECCCCCcccCC--CCCCcccCCCCCccccceeeecCCCcEE---------EEEEc--CCCcE-EEEec--CC
Q psy17188         71 GKPAYSYHVTTDGQMQPVP--FPPDALIGPGIPRHARQINTLSHGEVVC---------AVTIS--NPTKY-VYTGG--KG  134 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~s--~~~~~-l~~~~--d~  134 (504)
                      ...+..+++++++......  ..++...+|.............|...+.         ...|+  |||+. |+.+.  +.
T Consensus        23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~  102 (662)
T 3azo_A           23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ  102 (662)
T ss_dssp             CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred             CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence            4466777777554332222  1222233333222222222235555555         55555  99998 77766  45


Q ss_pred             eEEEEeCC--CCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC----------CcEEEEeCCC------CCccce
Q psy17188        135 CVKVWDIS--QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------SNLSIWDLAS------PTPRIK  196 (504)
Q Consensus       135 ~i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iw~~~~------~~~~~~  196 (504)
                      .|.+|++.  ..+....+.......|...+.+++|+|||+.|++++.+          ..|++||+.+      ++   .
T Consensus       103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~  179 (662)
T 3azo_A          103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---V  179 (662)
T ss_dssp             CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---S
T ss_pred             eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---e
Confidence            56666654  20222222211100156788999999999999998876          5899999987      33   2


Q ss_pred             eeee-cCcCceEEEEECCCCCEEEEEeCC--------CcEEEEECC-CC---eEEEeecCCCCCeEEEEEccCCCEEEEE
Q psy17188        197 AELT-SSAPACYALAISPDSKVCFSCCSD--------GNIAVWDLH-NQ---TLVRQFQGHTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       197 ~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ..+. .+...+..++|+|||++|+.++.+        ..|++||+. ++   +......+|...+..+.|+|||++++++
T Consensus       180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~  259 (662)
T 3azo_A          180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVAT  259 (662)
T ss_dssp             EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEE
T ss_pred             eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEE
Confidence            3344 455678889999999999988755        379999999 57   5555555567889999999999988888


Q ss_pred             cCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE--eCCCCCccce
Q psy17188        264 GLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW--DLASPTPRIK  339 (504)
Q Consensus       264 ~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~  339 (504)
                      ..++  .|.+||+.+++.....  ....     ......-...+..++|++++++++++.. +.+++|  |+.+++   .
T Consensus       260 ~~~~~~~l~~~~~~~~~~~~l~--~~~~-----~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~---~  328 (662)
T 3azo_A          260 DRTGWWNLHRVDPATGAATQLC--RREE-----EFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE---L  328 (662)
T ss_dssp             CTTSSCEEEEECTTTCCEEESS--CCSS-----BSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE---E
T ss_pred             CCCCCeEEEEEECCCCceeecc--cccc-----cccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc---E
Confidence            8888  6777777666543210  0000     0000000011456899999999999988 999999  544432   3


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..+..+...+..+. +++++..++++.+.+....+|.+
T Consensus       329 ~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~  365 (662)
T 3azo_A          329 VDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVEL  365 (662)
T ss_dssp             EECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEE
T ss_pred             EEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEE
Confidence            44455555565552 55666656777776665555544

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.82  E-value=5.2e-18  Score=155.87  Aligned_cols=270  Identities=11%  Similarity=0.043  Sum_probs=189.7

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      .+.+++|++++..++..+.++.++.|   .++....+..+...+.+++|++++++++++..++.|.+||..+++...+. 
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-   82 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-   82 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-
T ss_pred             ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-
Confidence            36678888888777777788899999   45666677777778899999999998888889999999999988754221 


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS  360 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  360 (504)
                                    ......+.+++++++|+++++...+    +.|.+||..+...............+..++++|++. 
T Consensus        83 --------------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-  147 (333)
T 2dg1_A           83 --------------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-  147 (333)
T ss_dssp             --------------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-
T ss_pred             --------------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-
Confidence                          1234568999999999987777666    689999988765332221122345788999999986 


Q ss_pred             ceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCC-CCccee
Q psy17188        361 PFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS-PTPRIK  432 (504)
Q Consensus       361 ~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~-~~~~~~  432 (504)
                       ++++...      .+.|..+|......    ...  ......+..++|+|+|+.|+++ ..++.|++||+.+ +.....
T Consensus       148 -l~v~~~~~~~~~~~~~l~~~~~~~~~~----~~~--~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~  220 (333)
T 2dg1_A          148 -FYFTDFRGYSTNPLGGVYYVSPDFRTV----TPI--IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP  220 (333)
T ss_dssp             -EEEEECCCBTTBCCEEEEEECTTSCCE----EEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE
T ss_pred             -EEEEeccccccCCCceEEEEeCCCCEE----EEe--ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc
Confidence             5555443      24555555432211    111  1122346789999999866554 5578899999864 222211


Q ss_pred             ------ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC------ceEEEEEccCCCEEEEec
Q psy17188        433 ------AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD------GASCIDISADGTKLWTGG  500 (504)
Q Consensus       433 ------~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~~~~s~d~~~l~s~s  500 (504)
                            .....+ ..+..++++++|+++++...++.|.+||. +++.+..+..+..      .+.+++|++|++.|+.++
T Consensus       221 ~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~  298 (333)
T 2dg1_A          221 FGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  298 (333)
T ss_dssp             EEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             ccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence                  111222 45778999999998888878899999998 5777777765443      689999999988887666


Q ss_pred             CC
Q psy17188        501 LD  502 (504)
Q Consensus       501 ~D  502 (504)
                      .+
T Consensus       299 ~~  300 (333)
T 2dg1_A          299 ND  300 (333)
T ss_dssp             EC
T ss_pred             Cc
Confidence            54

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.81  E-value=4.8e-17  Score=145.91  Aligned_cols=247  Identities=15%  Similarity=0.206  Sum_probs=172.8

Q ss_pred             cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec------CCCCCeEEEEE-ccCCCEEEEEcC-CCeEEEE
Q psy17188        201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ------GHTDGASCIDI-SADGTKLWTGGL-DNTVRSW  272 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~s~~~-dg~i~~w  272 (504)
                      ++.....+++++++++++++...++.|.+||.. ++.+..+.      ++...+.++++ .++++++++... ++.|++|
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~  105 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY  105 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence            344568899999999988888889999999987 65565553      24467899999 467766666533 8899999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      |........+               .......+..++++++|+++++...++.|.+||.... .........+...+..+
T Consensus       106 d~~g~~~~~~---------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~p~~i  169 (286)
T 1q7f_A          106 NQYGQFVRKF---------------GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGV  169 (286)
T ss_dssp             CTTSCEEEEE---------------CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEE
T ss_pred             CCCCcEEEEe---------------cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEEEeCCCCccCCcEEE
Confidence            9543322111               0122345789999999998887777889999996532 22222212344568899


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC-cEEEeeCCCCCcce
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRI  431 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~i~iwd~~~~~~~~  431 (504)
                      +++++++  ++++...++.|++||....    .+..+....+...+..++++++|+++++...++ .|.+||.. ++...
T Consensus       170 ~~~~~g~--l~v~~~~~~~i~~~~~~g~----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~  242 (286)
T 1q7f_A          170 VVNDKQE--IFISDNRAHCVKVFNYEGQ----YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLIS  242 (286)
T ss_dssp             EECSSSE--EEEEEGGGTEEEEEETTCC----EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEE
T ss_pred             EECCCCC--EEEEECCCCEEEEEcCCCC----EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEE
Confidence            9999987  7777778999999997432    111221112235678999999999888887776 99999964 44444


Q ss_pred             eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ..........+..++++|+|+++++ +.|++|++|++....
T Consensus       243 ~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          243 ALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             EEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             EEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence            4433333345778999999987777 679999999986543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.81  E-value=2e-15  Score=136.28  Aligned_cols=286  Identities=10%  Similarity=0.077  Sum_probs=198.4

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .+...+.++++.++|+.+++...++.|.+||.. ++.. ......+...+.++++.+++.++++...++.|..||.....
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~   89 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII   89 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence            345678999999999988777667899999987 4422 22223345678999999999888777668889999986322


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      ....+......+.++++.++++++++...++.|.+||. +++...+..              ......+..++++++|+.
T Consensus        90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~--------------~~~~~~~~~i~~~~~g~l  154 (299)
T 2z2n_A           90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL--------------PNKGSYPSFITLGSDNAL  154 (299)
T ss_dssp             EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSCE
T ss_pred             EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC--------------CCCCCCCceEEEcCCCCE
Confidence            22222234567899999999988888777889999998 665432211              112345789999999987


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      .++...++.|..||. +++.. ..........+..+++.+++.  ++++...++.|.+||. ....    ..........
T Consensus       155 ~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~-~g~~----~~~~~~~~~~  225 (299)
T 2z2n_A          155 WFTENQNNAIGRITE-SGDIT-EFKIPTPASGPVGITKGNDDA--LWFVEIIGNKIGRITT-SGEI----TEFKIPTPNA  225 (299)
T ss_dssp             EEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSS--EEEEETTTTEEEEECT-TCCE----EEEECSSTTC
T ss_pred             EEEeCCCCEEEEEcC-CCcEE-EeeCCCCCCcceeEEECCCCC--EEEEccCCceEEEECC-CCcE----EEEECCCCCC
Confidence            777777789999998 44322 222333445678999999887  6776667889999998 3321    1111222446


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      .+..++++++|+++++...++.|..||.. ++ ........+...+.++++ ++++++++.. .+.+..++.++++
T Consensus       226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          226 RPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             CEEEEEECSTTCEEEEETTTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             CceeEEECCCCCEEEeccCCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence            68899999999866666577889999984 32 233333444566889999 8888777655 5668788876654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.80  E-value=2.8e-17  Score=150.96  Aligned_cols=279  Identities=11%  Similarity=0.059  Sum_probs=190.4

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~  239 (504)
                      ..|.++.|++++..++..+.++.++.|.-   +  ....+..+...+.+++|++++++++++..++.|.+||.++++...
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~   80 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTITA---E--PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR   80 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---E--EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred             cccceeeecCCccceeEEeecccCccccc---c--eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence            45778889998887877778888999932   2  234455666678999999999988888889999999999887665


Q ss_pred             eecCCCCCeEEEEEccCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        240 QFQGHTDGASCIDISADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      ....+...+.+++++++++++++...+    +.|.+||..++.....-             ........+..++++|+|+
T Consensus        81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~-------------~~~~~~~~~~~i~~d~~g~  147 (333)
T 2dg1_A           81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII-------------EDLSTAYCIDDMVFDSKGG  147 (333)
T ss_dssp             EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE-------------CSSSSCCCEEEEEECTTSC
T ss_pred             EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE-------------ccCccCCcccceEECCCCC
Confidence            554567789999999999888877666    68999999887643110             0011235688999999998


Q ss_pred             EEEEEeC------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-Cccc-
Q psy17188        316 TLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVS-  387 (504)
Q Consensus       316 ~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~-  387 (504)
                      ++++...      .+.|..+|..+.+...   +......+..++++|+++. ++++...++.|.+||....... .... 
T Consensus       148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~i~~~~dg~~-l~v~~~~~~~i~~~d~~~~g~~~~~~~~  223 (333)
T 2dg1_A          148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTP---IIQNISVANGIALSTDEKV-LWVTETTANRLHRIALEDDGVTIQPFGA  223 (333)
T ss_dssp             EEEEECCCBTTBCCEEEEEECTTSCCEEE---EEEEESSEEEEEECTTSSE-EEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred             EEEEeccccccCCCceEEEEeCCCCEEEE---eecCCCcccceEECCCCCE-EEEEeCCCCeEEEEEecCCCcCcccccc
Confidence            7776653      3456666665433221   1122235788999999875 4455566789999998642211 1110 


Q ss_pred             -ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC----CCCceeEEEECCCCCEEEEeeCCC
Q psy17188        388 -QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----SAPACYALAISPDSKVCFSCCSDG  461 (504)
Q Consensus       388 -~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~~~~~l~s~~~dg  461 (504)
                       ..........+..++++++|+++++...++.|.+||.+ ++.........    +...+.+++|+||++.|+.++.++
T Consensus       224 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          224 TIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             EEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             eEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence             00001112467789999999988877778899999984 44333332221    122578899999988777665553

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.80  E-value=2.4e-17  Score=152.42  Aligned_cols=272  Identities=12%  Similarity=0.108  Sum_probs=179.3

Q ss_pred             CCceEEEEEccCCCEEEEec---------CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC---C-
Q psy17188        159 DNYIRSVKLLPDGRTLIVGG---------EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---G-  225 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g-  225 (504)
                      -..+...++  ||++++...         .++.|++||+.+++..   .+    ..+..++|+|||+.|+..+.+   + 
T Consensus        14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~   84 (347)
T 2gop_A           14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI----ENATMPRISPDGKKIAFMRANEEKKV   84 (347)
T ss_dssp             SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred             eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence            345777788  898888752         2567999999876532   22    457889999999999887754   2 


Q ss_pred             -cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---------------------------CeEEEEECCCC
Q psy17188        226 -NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---------------------------NTVRSWDLREG  277 (504)
Q Consensus       226 -~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~~wd~~~~  277 (504)
                       .|.+||+.+++.......+ . +..+.|+||++.|+.++.+                           ..|++||+.++
T Consensus        85 ~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~  162 (347)
T 2gop_A           85 SEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE  162 (347)
T ss_dssp             EEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred             ceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence             3888899888776655533 3 9999999999988887642                           57889999888


Q ss_pred             ce-EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCCccceeeeccCCCce
Q psy17188        278 CV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-------NLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       278 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      +. .              .+..   . .+..+.|+|+| +++++..++       ...+|.+.+++.   ..+..+ ..+
T Consensus       163 ~~~~--------------~l~~---~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~l~~~-~~~  219 (347)
T 2gop_A          163 EVIE--------------EFEK---P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE---EKMFEK-VSF  219 (347)
T ss_dssp             EEEE--------------EEEE---E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE---EEEEEE-ESE
T ss_pred             eEEe--------------eecC---C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce---EEeccC-cce
Confidence            64 2              1211   2 57789999999 777775542       334444433322   122222 334


Q ss_pred             eeEEECCCCCCceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCceEE-EEEcCCCCEEEEeeCCCcEEEe
Q psy17188        350 YALAISPDSKSPFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ..+  +|+++.+++.+...      ...|.+||  .+ ....+    ...+...+.. +.|+ |+ ++++++.++.++||
T Consensus       220 ~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l----~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~  288 (347)
T 2gop_A          220 YAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGI----LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY  288 (347)
T ss_dssp             EEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEES----STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred             eeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ceEec----cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence            433  89998644443322      34677887  22 11111    1133556776 8999 88 88899999999999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE-EEEEcCCcceEEEEeecCCc
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI-AVWDLHNQTLVRQFQGHTDG  483 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i-~iwd~~~~~~~~~~~~h~~~  483 (504)
                       +.+++...   +..+...|.+++|+|  .++++++.++.. .||.+. ++ ...+..|...
T Consensus       289 -~~~g~~~~---~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~  342 (347)
T 2gop_A          289 -IWDGEIKP---IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP  342 (347)
T ss_dssp             -EESSSEEE---EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred             -EcCCceEE---EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence             87443322   223366789999999  677777777665 777776 54 4456655543

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.80  E-value=4.6e-17  Score=148.96  Aligned_cols=245  Identities=10%  Similarity=0.065  Sum_probs=175.7

Q ss_pred             CcEEEEEEcCCCcEEEEec-C------------------------CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEc
Q psy17188        114 EVVCAVTISNPTKYVYTGG-K------------------------GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  168 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  168 (504)
                      +.+.+++++++|+++++.. +                        +.|.+||.+++..   +.. ....+-.....++++
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~---~~~-~~~~~~~~p~gia~d   99 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI---LQS-SGKNLFYLPHGLSID   99 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE---EEE-ECTTTCSSEEEEEEC
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE---Eec-cCCCccCCceEEEEC
Confidence            5789999999999999887 5                        3799999876532   111 111344678999999


Q ss_pred             cCCCEEEEecCCCcEEEEeCCCCCccceeee---------ecCcCceEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeE
Q psy17188        169 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL---------TSSAPACYALAISP-DSKVCFSCC-SDGNIAVWDLHNQTL  237 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~s~-~~~~l~~~~-~dg~i~iwd~~~~~~  237 (504)
                      ++|+++++...++.|++|+...... ....+         ..+......++++| ++.++++.+ .++.|++|+ .+++.
T Consensus       100 ~~g~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~  177 (329)
T 3fvz_A          100 TDGNYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKF  177 (329)
T ss_dssp             TTSCEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred             CCCCEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCE
Confidence            9999888888889999999865321 12222         23444688999999 788777776 689999999 56777


Q ss_pred             EEeecC----------CCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        238 VRQFQG----------HTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       238 ~~~~~~----------h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      +..+..          +......++++|+ +.++++...++.|++||..+++...             .+........+.
T Consensus       178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~-------------~~~~~~~~~~~~  244 (329)
T 3fvz_A          178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR-------------EIKHASFGRNVF  244 (329)
T ss_dssp             EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-------------EECCTTTTTCEE
T ss_pred             EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE-------------EEeccccCCCcc
Confidence            776642          2234899999998 7777888889999999998776421             222223445677


Q ss_pred             EEEEcC------CCCEEEEEeCCCcEEEEeCCCCCccceee-eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        307 SVKLLP------DGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       307 ~~~~~~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .++++|      +|+..++...+..+++||..+++...... ...+...+..++++|++.  ++++...++.|++|++..
T Consensus       245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~--lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT--VYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE--EEEEESSSCCEEEEEEEE
T ss_pred             eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC--EEEEECCCCEEEEEeCCc
Confidence            888988      33322223344589999988774332211 134556788999999995  888888999999999864

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.80  E-value=1.1e-17  Score=154.73  Aligned_cols=269  Identities=14%  Similarity=0.194  Sum_probs=178.3

Q ss_pred             CCCEEEEEe------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCC
Q psy17188        214 DSKVCFSCC------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREG  277 (504)
Q Consensus       214 ~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~  277 (504)
                      +++++++..      .|+.|.+||..+++.+..+..+..+  .++|+||+++++++.          .++.|.+||..++
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~   91 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL   91 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence            555566553      3679999999999998888876655  899999999998886          3678999999887


Q ss_pred             ceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceee-eccCCCceeeEE
Q psy17188        278 CVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAE-LTSSAPACYALA  353 (504)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~~  353 (504)
                      +... .....          ...........++++|+|++|+++..  ++.|.+||+.+.+.  ... +...  ....+.
T Consensus        92 ~~~~~i~~~~----------~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~~--~~~~v~  157 (361)
T 2oiz_A           92 TFEKEISLPP----------KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAAA--GCWSVI  157 (361)
T ss_dssp             CEEEEEEECT----------TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGGT--TEEEEE
T ss_pred             cEEEEEEcCc----------cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecCC--CcceeE
Confidence            6421 11000          00012245678999999999999864  57899999998732  223 2221  223356


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      +.|++.. .+++.+.|+.+.+|++........... ............+.+++++..++..+.++.++++|+........
T Consensus       158 ~~p~~~~-~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~  236 (361)
T 2oiz_A          158 PQPNRPR-SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVD  236 (361)
T ss_dssp             ECTTSSS-EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEE
T ss_pred             EcCCCCe-eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceec
Confidence            7777654 566777888888888764322110000 00000011111334467777777778889999999875543221


Q ss_pred             eccc--C--------CCCceeEEEECCCCCEEEEeeC-----------CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        433 AELT--S--------SAPACYALAISPDSKVCFSCCS-----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       433 ~~~~--~--------~~~~v~~l~~s~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      ....  .        .......++|+||++.++++..           .+.|.+||+.+++.+.++..+.  +.+++|+|
T Consensus       237 ~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~sp  314 (361)
T 2oiz_A          237 GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQ  314 (361)
T ss_dssp             EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEET
T ss_pred             ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECC
Confidence            1100  0        0011122689999888877643           3479999999999999999877  99999999


Q ss_pred             CCCEEEEecC
Q psy17188        492 DGTKLWTGGL  501 (504)
Q Consensus       492 d~~~l~s~s~  501 (504)
                      ||++|++++.
T Consensus       315 dg~~l~v~n~  324 (361)
T 2oiz_A          315 QRNLMLTLDG  324 (361)
T ss_dssp             TTTEEEEECS
T ss_pred             CCCEEEEeCC
Confidence            9999998875

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.80  E-value=1.3e-16  Score=143.15  Aligned_cols=242  Identities=11%  Similarity=0.160  Sum_probs=169.3

Q ss_pred             CCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeee----cCCCCceEEEEE-ccCCCEEEEecC-CCcEE
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDC----LQRDNYIRSVKL-LPDGRTLIVGGE-ASNLS  184 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~----~~~~~~v~~~~~-s~~~~~l~~~~~-dg~i~  184 (504)
                      |-....+++++++++++++.. ++.|.+||.+. .   .+..+..    ..+...+.++++ .++++++++... ++.|.
T Consensus        28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~  103 (286)
T 1q7f_A           28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ  103 (286)
T ss_dssp             CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred             ccCCCceEEECCCCCEEEEECCCCEEEEECCCC-c---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence            445679999999999888866 89999999763 2   1222211    123457899999 467776666533 78999


Q ss_pred             EEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec--CCCCCeEEEEEccCCCEEE
Q psy17188        185 IWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISADGTKLW  261 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~  261 (504)
                      +||.. ++.  ...+. .+...+.+++++++++++++...++.|.+||.. ++.+..+.  .+...+.++++++++++++
T Consensus       104 ~~d~~-g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v  179 (286)
T 1q7f_A          104 IYNQY-GQF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFI  179 (286)
T ss_dssp             EECTT-SCE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred             EECCC-CcE--EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence            99943 332  22222 234568899999999988877778899999964 55555553  3556789999999998888


Q ss_pred             EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCCcccee
Q psy17188        262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKA  340 (504)
Q Consensus       262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~  340 (504)
                      +...++.|++||.....+..+              ........+..++++++|+++++...++ .|.+||... +.....
T Consensus       180 ~~~~~~~i~~~~~~g~~~~~~--------------~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~  244 (286)
T 1q7f_A          180 SDNRAHCVKVFNYEGQYLRQI--------------GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISAL  244 (286)
T ss_dssp             EEGGGTEEEEEETTCCEEEEE--------------SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEE
T ss_pred             EECCCCEEEEEcCCCCEEEEE--------------ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEE
Confidence            888899999999865433211              1111224678999999999888887775 999999643 222222


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ........+..++++|+++  ++++ +.++.|++|+...
T Consensus       245 ~~~~~~~~~~~i~~~~~g~--l~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          245 ESKVKHAQCFDVALMDDGS--VVLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             EESSCCSCEEEEEEETTTE--EEEE-ETTTEEEEEECSC
T ss_pred             cccCCCCcceeEEECCCCc--EEEE-CCCCeEEEEEccc
Confidence            2222233477899999986  5666 4689999999764

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.79  E-value=5e-16  Score=150.76  Aligned_cols=319  Identities=13%  Similarity=0.086  Sum_probs=207.0

Q ss_pred             cCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEeecCCCC
Q psy17188        169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTD  246 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~h~~  246 (504)
                      +.+.++++...+++|.++|..+++.  ...+.. ...+..+.|+||++++++++.|+.|.+||+.  +++.+.++... .
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v--~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~  240 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEI--KTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-S  240 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCE--EEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-S
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeE--EEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-C
Confidence            4455667777899999999987764  333332 2346689999999999999999999999996  88888888743 3


Q ss_pred             CeEEEEEc----cCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-E
Q psy17188        247 GASCIDIS----ADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-G  320 (504)
Q Consensus       247 ~v~~~~~~----~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~  320 (504)
                      ....++|+    |||++++++.. ++++.++|..+.+... .+......  ... ........+..+..++++..+++ .
T Consensus       241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~-~i~~~~~~--~~~-~~~~p~~rva~i~~s~~~~~~vv~~  316 (567)
T 1qks_A          241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK-IQSTRGMT--YDE-QEYHPEPRVAAILASHYRPEFIVNV  316 (567)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE-EEECCEEC--TTT-CCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE-EEeccccc--ccc-ccccCCCceEEEEEcCCCCEEEEEe
Confidence            46899999    69998877665 5899999988876431 11100000  000 00001225778888887665444 4


Q ss_pred             eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS  400 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~  400 (504)
                      ..+|.|.++|....+......+. .......+.|+|+++. ++++...++.|.++|..+.+....+..-....|.+.-..
T Consensus       317 ~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~-~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~  394 (567)
T 1qks_A          317 KETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRY-FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN  394 (567)
T ss_dssp             TTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCE-EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred             cCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCE-EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence            56789999998775433333332 2335668899999996 455566788999999987643222211011233322222


Q ss_pred             EEEcCCCCEEE-Eee-CCCcEEEeeCCC-------CCcceeecccCCCCceeEEEECCCCCEEEEeeC-------CCcEE
Q psy17188        401 VKLLPDGRTLI-VGG-EASNLSIWDLAS-------PTPRIKAELTSSAPACYALAISPDSKVCFSCCS-------DGNIA  464 (504)
Q Consensus       401 ~~~s~~g~~l~-~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-------dg~i~  464 (504)
                      + ++|++..+. ++. .++.|.++|..+       .+.+......+  ..-..+..+|++++|.+...       ..+|.
T Consensus       395 ~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~  471 (567)
T 1qks_A          395 F-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVA  471 (567)
T ss_dssp             E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred             e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence            2 688755554 443 468899999987       23323322222  22234588999999988663       35899


Q ss_pred             EEEcCCc-----ce-EEEEe--------ecCCceEEEEEccCCCEEEEec
Q psy17188        465 VWDLHNQ-----TL-VRQFQ--------GHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       465 iwd~~~~-----~~-~~~~~--------~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ++|+.+.     .. ...+.        .....+..+.|++||+++..+.
T Consensus       472 v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~  521 (567)
T 1qks_A          472 VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSV  521 (567)
T ss_dssp             EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEE
T ss_pred             EEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEe
Confidence            9999876     21 13332        1234689999999999988763

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.78  E-value=1.7e-16  Score=144.88  Aligned_cols=284  Identities=11%  Similarity=0.052  Sum_probs=186.5

Q ss_pred             CCCcEEEEeCCCCCccceeee----ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEc
Q psy17188        179 EASNLSIWDLASPTPRIKAEL----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~  254 (504)
                      .++.|.++|.++++.......    .........+.+. +++++++...++.|.+||..+++.+.++. .......++++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~   92 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL   92 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence            478999999987654221100    0112335677774 44555566667899999999999988886 45678999999


Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe--CCCcEEEEeC
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDL  331 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~  331 (504)
                      ++++.+++...++.|.+||+.++++.. +....           ..........+++  ++..|+++.  .++.|.++|.
T Consensus        93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~-----------~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~  159 (328)
T 3dsm_A           93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPD-----------MDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDT  159 (328)
T ss_dssp             ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT-----------CCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEET
T ss_pred             CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC-----------ccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEEC
Confidence            988544554489999999999987531 11100           0000113456666  345555554  4789999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC----------CeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK----------SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      .+.+.......   ......++++++++  ++++...+          +.|.++|..+.....   ... .........+
T Consensus       160 ~t~~~~~~i~~---g~~p~~i~~~~dG~--l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~---~~~-~~~g~~p~~l  230 (328)
T 3dsm_A          160 ETDKVVDELTI---GIQPTSLVMDKYNK--MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK---QFK-FKLGDWPSEV  230 (328)
T ss_dssp             TTTEEEEEEEC---SSCBCCCEECTTSE--EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE---EEE-CCTTCCCEEE
T ss_pred             CCCeEEEEEEc---CCCccceEEcCCCC--EEEEECCCccCCccccCCceEEEEECCCCeEEE---EEe-cCCCCCceeE
Confidence            88753333222   23457889999987  55555444          789999987643211   111 1112357899


Q ss_pred             EEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECC-CCCEEEEe----eCCCcEEEEEcCCcceEEE
Q psy17188        402 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP-DSKVCFSC----CSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~l~s~----~~dg~i~iwd~~~~~~~~~  476 (504)
                      +++|++++|+++..  .|.+||..+++................++++| +++++++.    ..++.|.+||.. ++.+.+
T Consensus       231 a~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~  307 (328)
T 3dsm_A          231 QLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE  307 (328)
T ss_dssp             EECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred             EEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence            99999999988765  89999998776432222222245678899999 55555555    568899999998 998888


Q ss_pred             EeecCCceEEEEEc
Q psy17188        477 FQGHTDGASCIDIS  490 (504)
Q Consensus       477 ~~~h~~~v~~~~~s  490 (504)
                      +.. ......++|-
T Consensus       308 i~~-G~~P~~~~~~  320 (328)
T 3dsm_A          308 FYV-GIIPGAFCWK  320 (328)
T ss_dssp             EEE-EESEEEEEEE
T ss_pred             EEe-ccCcceEEEe
Confidence            874 3334566653

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.78  E-value=1.5e-16  Score=145.59  Aligned_cols=242  Identities=14%  Similarity=0.078  Sum_probs=170.4

Q ss_pred             CCCCeEEEEEccCCCEEEEEcCC------------------------CeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        244 HTDGASCIDISADGTKLWTGGLD------------------------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~~d------------------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                      .-+.+.+++++|+|+++++...+                        ++|.+||..++++...              ...
T Consensus        22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--------------~~~   87 (329)
T 3fvz_A           22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS--------------SGK   87 (329)
T ss_dssp             CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE--------------ECT
T ss_pred             ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec--------------cCC
Confidence            34678999999999988888777                        4799999988875311              111


Q ss_pred             ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee---------ccCCCceeeEEECC-CCCCceeeecc-C
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---------TSSAPACYALAISP-DSKSPFFSSHH-Y  368 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---------~~~~~~i~~~~~~~-~~~~~~~~~~~-~  368 (504)
                      .....+..++++++|+++++...++.|++||..... .....+         ..+......++++| ++.  ++++.+ .
T Consensus        88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~--lyv~d~~~  164 (329)
T 3fvz_A           88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA--VFVSDGYC  164 (329)
T ss_dssp             TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC--EEEEECSS
T ss_pred             CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCe--EEEEeCCC
Confidence            233468899999999988888888999999986542 122222         23344688999999 565  677765 6


Q ss_pred             CCeEEEEecCCCCCCCccccccc-----ccCCCceEEEEEcCC-CCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCce
Q psy17188        369 KSCVKVWDISQPGSKTPVSQLDC-----LQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  442 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v  442 (504)
                      ++.|++|+... .....+.....     ..+-.....++++|+ +.++++...++.|++|+..+++.+.......+...+
T Consensus       165 ~~~I~~~~~~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~  243 (329)
T 3fvz_A          165 NSRIVQFSPSG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV  243 (329)
T ss_dssp             CCEEEEECTTS-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred             CCeEEEEcCCC-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence            89999999432 11111100000     011234789999998 777777778889999999877766666555666678


Q ss_pred             eEEEECC------CCCEEEEeeCCCcEEEEEcCCcceEEEEe---ecCCceEEEEEccCCCEEEEecCCC
Q psy17188        443 YALAISP------DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---GHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       443 ~~l~~s~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ..++++|      +++..++...+..|++|+..+++.+..+.   ++...+..|+++|||+.+++...++
T Consensus       244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~  313 (329)
T 3fvz_A          244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN  313 (329)
T ss_dssp             EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred             ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence            8999999      33333333345589999999999998874   5667799999999997777766654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.78  E-value=1.4e-14  Score=130.61  Aligned_cols=283  Identities=9%  Similarity=0.079  Sum_probs=198.2

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .+...+.+++++++|+++++.. ++.|.+||.. +.    +...........+.+++++++++++++...++.|..|+..
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~   86 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK----ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK   86 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC----eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence            3456889999999999888877 7899999976 32    2222222345679999999999988887778889999976


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-eecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNT  268 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~  268 (504)
                       ++. ....+......+..+++.++++++++...++.|.+||. +++... ....+...+.++++.++++++++...++.
T Consensus        87 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~  163 (299)
T 2z2n_A           87 -GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA  163 (299)
T ss_dssp             -SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred             -CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence             222 12222234456899999999988887777889999998 554433 23334567899999999988887777889


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |..||. +++...+..              ......+..++++++|+..++...++.|.+||. +++. ...........
T Consensus       164 i~~~~~-~g~~~~~~~--------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~  226 (299)
T 2z2n_A          164 IGRITE-SGDITEFKI--------------PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKIPTPNAR  226 (299)
T ss_dssp             EEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCC
T ss_pred             EEEEcC-CCcEEEeeC--------------CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEECCCCCCC
Confidence            999999 666543211              122345789999999997776666789999998 5432 22223334457


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      +..+++.+++.  ++++...++.|..||.. +    .+...........+.++++ ++|++.++.. .+.+..++.++.
T Consensus       227 ~~~i~~~~~g~--l~v~~~~~~~i~~~d~~-g----~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~  296 (299)
T 2z2n_A          227 PHAITAGAGID--LWFTEWGANKIGRLTSN-N----IIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD  296 (299)
T ss_dssp             EEEEEECSTTC--EEEEETTTTEEEEEETT-T----EEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred             ceeEEECCCCC--EEEeccCCceEEEECCC-C----ceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence            88999999987  66666678899999973 2    1222222233456889999 8888666654 567878877654

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.78  E-value=1.5e-16  Score=146.99  Aligned_cols=250  Identities=16%  Similarity=0.172  Sum_probs=167.3

Q ss_pred             ceEEEEECCCCCEEEEEe---------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---C--eEE
Q psy17188        205 ACYALAISPDSKVCFSCC---------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---N--TVR  270 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g--~i~  270 (504)
                      .+..+.+  ||+.++...         .++.|.+||+.+++... +    ..+..+.|+|||++|+..+.+   +  .|.
T Consensus        16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~   88 (347)
T 2gop_A           16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW   88 (347)
T ss_dssp             EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred             EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence            4566777  888777642         25679999999887543 3    568899999999999887654   3  488


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------------------------
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------------------------  323 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------  323 (504)
                      +||+.+++...                ...... +..++|+|+|+.|+.++.+                           
T Consensus        89 ~~~~~~g~~~~----------------l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  151 (347)
T 2gop_A           89 VADLETLSSKK----------------ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK  151 (347)
T ss_dssp             EEETTTTEEEE----------------EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred             EEECCCCceEE----------------EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence            88888876431                112223 8899999999998887632                           


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----C-eEEEEecCCCCCCCcccccccccCCCc
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----S-CVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~-~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      ..|.+||+.+++...  .+.. . .+..+.|+|++  .++.+....     . ...+|.+. ....   ..+.  .+ ..
T Consensus       152 ~~l~~~d~~~~~~~~--~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~~~---~~l~--~~-~~  218 (347)
T 2gop_A          152 TTFWIFDTESEEVIE--EFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DGKE---EKMF--EK-VS  218 (347)
T ss_dssp             EEEEEEETTTTEEEE--EEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TTEE---EEEE--EE-ES
T ss_pred             ceEEEEECCCCeEEe--eecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CCce---EEec--cC-cc
Confidence            568999998765311  2222 2 78899999998  344332221     2 34555544 2211   1111  12 33


Q ss_pred             eEEEEEcCCCCEEEEeeCC--------CcEEEeeCCCCCcceeecccCCCCceeE-EEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        398 IRSVKLLPDGRTLIVGGEA--------SNLSIWDLASPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      +..+  +|||++|+.++.+        ..|++||  +++.  ......+...+.. +.|+ |+ ++++++.++.++|| +
T Consensus       219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~--~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~  289 (347)
T 2gop_A          219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV--MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I  289 (347)
T ss_dssp             EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE--EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred             eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce--EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence            4333  9999998877654        3588888  4432  2233445567776 8999 88 88999999999999 8


Q ss_pred             CCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        469 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       469 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .+++.. .+..+...|.+++|+|  ..+++++.++
T Consensus       290 ~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~  321 (347)
T 2gop_A          290 WDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETAT  321 (347)
T ss_dssp             ESSSEE-EEECSSSEEEEEEESS--SEEEEEECSS
T ss_pred             cCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCC
Confidence            866654 4444677899999999  6777777664

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.77  E-value=2.8e-16  Score=159.40  Aligned_cols=287  Identities=14%  Similarity=0.090  Sum_probs=183.2

Q ss_pred             cCCCEEEEecCC-----CcEEEEeCCCCCccceee----eecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Q psy17188        169 PDGRTLIVGGEA-----SNLSIWDLASPTPRIKAE----LTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHN  234 (504)
Q Consensus       169 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~  234 (504)
                      |+|++++....+     +.+++.+...++......    -.++...+..++|||||++|+.+..++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            777777665322     134444444333221111    112334688999999999998776543     899999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe----------------EEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT----------------VRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~----------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      ++.+.....+ ..+..++|+|||+.|+.++.++.                |++|++.+++...           ......
T Consensus       161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------~~v~~~  228 (710)
T 2xdw_A          161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-----------ILCAEF  228 (710)
T ss_dssp             TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-----------EEEECC
T ss_pred             CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-----------eEEecc
Confidence            9877643322 23678999999999999888765                9999998775210           001111


Q ss_pred             cccCCceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCC------CCccceeeeccCCCceeeEEECCCCCCceeeecc
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGGE-----ASNLSIWDLAS------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHH  367 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  367 (504)
                      ..+...+..+.|+|||++|+..+.     +..|++||+.+      +.. ....+..+...+.. .|+++++.+++.+..
T Consensus       229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~  306 (710)
T 2xdw_A          229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNR  306 (710)
T ss_dssp             TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECT
T ss_pred             CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECC
Confidence            123445778999999999988764     56899999876      321 22233333334433 588888864444432


Q ss_pred             --CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc--EEEeeCCCCCcceeecccCCCCcee
Q psy17188        368 --YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN--LSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       368 --~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                        ....|.+||+...... ....+........+..++|++++.++++...++.  |++|++.+++.....  ..+...+.
T Consensus       307 ~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l--~~~~~~v~  383 (710)
T 2xdw_A          307 HSPNYRLINIDFTDPEES-KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF--PLEVGSVV  383 (710)
T ss_dssp             TCTTCEEEEEETTSCCGG-GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE--CCCSSEEE
T ss_pred             CCCCCEEEEEeCCCCCcc-cceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec--CCCCceEE
Confidence              2347999998764311 1111111111236778999988888888888885  666777566543333  33466788


Q ss_pred             EEEECCCCCEEEEee----CCCcEEEEEcCCcc
Q psy17188        444 ALAISPDSKVCFSCC----SDGNIAVWDLHNQT  472 (504)
Q Consensus       444 ~l~~s~~~~~l~s~~----~dg~i~iwd~~~~~  472 (504)
                      .+.++|+++.++...    ..+.|++||+.+++
T Consensus       384 ~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          384 GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            899999998766332    35789999998877

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.75  E-value=8.8e-16  Score=138.33  Aligned_cols=247  Identities=11%  Similarity=0.025  Sum_probs=171.2

Q ss_pred             eecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        199 LTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      +..+.....+++|+|+++ +++++..++.|..||..++  ...+..+...+.+++++++|+++++...++.|.+||..++
T Consensus        23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g  100 (296)
T 3e5z_A           23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG  100 (296)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred             EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence            344455578899999998 7788888999999999887  5666667788999999999998888777899999999888


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE----e-------------CCCcEEEEeCCCCCcccee
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG----G-------------EASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~v~d~~~~~~~~~~  340 (504)
                      +...+..           .........+..++++|+|+++++.    +             ..+.|..++.. ++   ..
T Consensus       101 ~~~~~~~-----------~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~  165 (296)
T 3e5z_A          101 EWESIAD-----------SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---LS  165 (296)
T ss_dssp             CEEEEEC-----------EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---EE
T ss_pred             cEEEEee-----------ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC---EE
Confidence            7543210           0001112346789999999988873    2             13456666554 22   22


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      ...........++|+|+++  .+++...++.|.+|++...... .....+  ......+..++++++|+++++.  ++.|
T Consensus       166 ~~~~~~~~~~gi~~s~dg~--~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v  239 (296)
T 3e5z_A          166 APIRDRVKPNGLAFLPSGN--LLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGV  239 (296)
T ss_dssp             EEECCCSSEEEEEECTTSC--EEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred             EeecCCCCCccEEECCCCC--EEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence            2334445678999999998  4577778899999998732221 111111  1234556789999999866665  7889


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEE-CCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAI-SPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~-s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      .+||.+ ++.....  ..+.. +++++| +|+++.|++++.++ +..++.++.++
T Consensus       240 ~~~~~~-g~~~~~~--~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~  289 (296)
T 3e5z_A          240 HVLTPD-GDELGRV--LTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL  289 (296)
T ss_dssp             EEECTT-SCEEEEE--ECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred             EEECCC-CCEEEEE--ECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence            999986 4433333  33334 788899 68999999888764 66666666554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.75  E-value=2.9e-16  Score=158.75  Aligned_cols=282  Identities=13%  Similarity=0.053  Sum_probs=172.7

Q ss_pred             cCCCcEEEEec-CC---eEEEEeCC--CCCCCCceeeee--ecCCCCceEEEEEccCCCEEEE-----ecCCCcEEEEeC
Q psy17188        122 SNPTKYVYTGG-KG---CVKVWDIS--QPGSKTPVSQLD--CLQRDNYIRSVKLLPDGRTLIV-----GGEASNLSIWDL  188 (504)
Q Consensus       122 s~~~~~l~~~~-d~---~i~vw~~~--~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~-----~~~dg~i~iw~~  188 (504)
                      +|+|++++... ++   .-.||...  .+. ...+....  ..+|...+.+++|||||++||.     |+.+..|++||+
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl  154 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV  154 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence            37888887655 32   34455443  321 12121111  1134557999999999999994     445578999999


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEeecCCCCCeEEE
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN-------------IAVWDLHNQT----LVRQFQGHTDGASCI  251 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~h~~~v~~~  251 (504)
                      .+++......+...  ....++|+|||+.|+.++.|..             |++|++.+++    ++.....|...+..+
T Consensus       155 ~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~  232 (695)
T 2bkl_A          155 DSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS  232 (695)
T ss_dssp             TTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred             CCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence            98764311112111  1257899999999999988776             9999998775    454555566788999


Q ss_pred             EEccCCCEEEEEcCCC----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC----C
Q psy17188        252 DISADGTKLWTGGLDN----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A  323 (504)
Q Consensus       252 ~~~~~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d  323 (504)
                      .|+|||++|+..+.++    .|++|+..+++.+.                ...+...+....+ ++|+ ++..+.    +
T Consensus       233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------------l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~  294 (695)
T 2bkl_A          233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL----------------LVKGVGAKYEVHA-WKDR-FYVLTDEGAPR  294 (695)
T ss_dssp             EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE----------------EEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred             EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE----------------eecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence            9999999988877665    67777665554321                1222333444445 5555 444433    4


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  403 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~  403 (504)
                      +.|.+||+.++.......+..+                                               .....+..+++
T Consensus       295 ~~l~~~d~~~~~~~~~~~l~~~-----------------------------------------------~~~~~l~~~~~  327 (695)
T 2bkl_A          295 QRVFEVDPAKPARASWKEIVPE-----------------------------------------------DSSASLLSVSI  327 (695)
T ss_dssp             CEEEEEBTTBCSGGGCEEEECC-----------------------------------------------CSSCEEEEEEE
T ss_pred             CEEEEEeCCCCCccCCeEEecC-----------------------------------------------CCCCeEEEEEE
Confidence            6677777765421100000000                                               01223446677


Q ss_pred             cCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEECCCCCEEEEe----eCCCcEEEEEcCCcce
Q psy17188        404 LPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAISPDSKVCFSC----CSDGNIAVWDLHNQTL  473 (504)
Q Consensus       404 s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~----~~dg~i~iwd~~~~~~  473 (504)
                      + ++.++++...|+..++|.+. +++......+ .....+..+.++|+++.|+..    ...++|++||+.+++.
T Consensus       328 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          328 V-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL-PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             E-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             E-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            6 66778888888887777554 2332222222 124567778899999877733    2357899999988764

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.75  E-value=1.5e-14  Score=133.75  Aligned_cols=279  Identities=10%  Similarity=0.042  Sum_probs=175.3

Q ss_pred             eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeee--cC
Q psy17188        135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELT--SS  202 (504)
Q Consensus       135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~--~~  202 (504)
                      .|.+||..+++.   +..+.  ....+  .++++||+++|+++.          .++.|.+||..+.+......+.  ..
T Consensus        48 ~v~v~D~~t~~~---~~~i~--~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~  120 (373)
T 2mad_H           48 QQWVLDAGSGSI---LGHVN--GGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR  120 (373)
T ss_pred             EEEEEECCCCeE---EEEec--CCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence            889999987542   22222  12222  899999999999985          3678999999876543222222  00


Q ss_pred             ---cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEe-ecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECC
Q psy17188        203 ---APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       203 ---~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~  275 (504)
                         ......++|+|||++|+++..  ++.|.++| .+++.+.. +.. ..   ++.+.|++ +.+++.+.||.+.++|. 
T Consensus       121 ~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-  194 (373)
T 2mad_H          121 FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-  194 (373)
T ss_pred             cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-
Confidence               122457899999999998874  47899999 99998887 653 22   24455654 45677788999999999 


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      +++.... ....       ... ...........+.+++..++..+..+.+.+.|+..........+...........|.
T Consensus       195 ~g~~~~~-~~~~-------~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~  265 (373)
T 2mad_H          195 AGGAAGA-GLVG-------AML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWR  265 (373)
T ss_pred             CCcEEEE-Eecc-------ccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccccee
Confidence            7764311 0000       000 111111223456666655555557788999888654221111110000000001111


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCC
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLA  425 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~  425 (504)
                                                             ......++++||++.+++...          .+.|.++|..
T Consensus       266 ---------------------------------------p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~  306 (373)
T 2mad_H          266 ---------------------------------------PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL  306 (373)
T ss_pred             ---------------------------------------cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence                                                   112335778999988887653          3579999999


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEE
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~  477 (504)
                      +.+.+.......   ....++|+|||+ +++++. .++.|.+||+.+++.+.++
T Consensus       307 t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          307 VGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            877655554433   367789999999 777776 4899999999999999884

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.75  E-value=5.9e-14  Score=126.56  Aligned_cols=282  Identities=12%  Similarity=0.115  Sum_probs=195.4

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .....+.++++.++++..++...++.|.+||.. ++.. ...+......+..+++.++++++++...++.|..||.. ++
T Consensus        17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~   93 (300)
T 2qc5_A           17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG   93 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence            345678899999999988877778999999987 4432 22233334568999999999877776667889999988 55


Q ss_pred             EE-EeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        237 LV-RQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       237 ~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      .. ..+......+.++++.++++++++...++.|..+|.. ++...+..              ......+..++++++++
T Consensus        94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--------------~~~~~~~~~i~~d~~g~  158 (300)
T 2qc5_A           94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--------------PNKGSYPAFITLGSDNA  158 (300)
T ss_dssp             EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--------------SSTTCCEEEEEECTTSS
T ss_pred             eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--------------CCCCCCceeEEECCCCC
Confidence            43 2223344678999999999888887778899999987 65442221              11234578999999999


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      ..++...++.|..+|. +++.. ..........+..+++.+++.  ++++....+.|.+|+.. +.    ..........
T Consensus       159 l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~--l~v~~~~~~~i~~~~~~-g~----~~~~~~~~~~  229 (300)
T 2qc5_A          159 LWFTENQNNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGA--LWFVEIMGNKIGRITTT-GE----ISEYDIPTPN  229 (300)
T ss_dssp             EEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSS--EEEEETTTTEEEEECTT-CC----EEEEECSSTT
T ss_pred             EEEEecCCCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCC--EEEEccCCCEEEEEcCC-Cc----EEEEECCCCC
Confidence            6666666788999998 43322 222333445688999999886  66666667889999872 21    1111111234


Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ..+..++++++|++.++...++.|..||.. ++ ............+.+++++++|+++++.. . .|..+|.+
T Consensus       230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~  299 (300)
T 2qc5_A          230 ARPHAITAGKNSEIWFTEWGANQIGRITND-NT-IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN  299 (300)
T ss_dssp             CCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred             CCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence            567899999999876666667889999984 33 22333333345578889999998776655 4 67767653

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.74  E-value=2.9e-15  Score=134.95  Aligned_cols=237  Identities=11%  Similarity=0.044  Sum_probs=166.3

Q ss_pred             EEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC
Q psy17188        237 LVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR  315 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  315 (504)
                      .+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+.                .....+.+++++++|+
T Consensus        19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~----------------~~~~~~~~l~~~~dg~   81 (296)
T 3e5z_A           19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM----------------HPSHHQNGHCLNKQGH   81 (296)
T ss_dssp             CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE----------------SSCSSEEEEEECTTCC
T ss_pred             cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE----------------CCCCCcceeeECCCCc
Confidence            3344445666788999999998 7888888999999999887 44321                2335588999999999


Q ss_pred             EEEEEeCCCcEEEEeCCCCCccceeeec--cCCCceeeEEECCCCCCceeee----cc-------------CCCeEEEEe
Q psy17188        316 TLIVGGEASNLSIWDLASPTPRIKAELT--SSAPACYALAISPDSKSPFFSS----HH-------------YKSCVKVWD  376 (504)
Q Consensus       316 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~----~~-------------~~~~i~i~d  376 (504)
                      ++++...++.|.+||..+++........  .....+..++++|+++  ++++    +.             ..+.|..++
T Consensus        82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~  159 (296)
T 3e5z_A           82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA  159 (296)
T ss_dssp             EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred             EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEEC
Confidence            8877777789999999776533222111  1123467899999997  5665    22             123455554


Q ss_pred             cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCc-ceeecccCCCCceeEEEECCCCCEE
Q psy17188        377 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTP-RIKAELTSSAPACYALAISPDSKVC  454 (504)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~-~~~~~~~~~~~~v~~l~~s~~~~~l  454 (504)
                      ..  ...   ..  ..........++|+|+++.+++.+.++.|++|++. +++. .....+..+...+..++++++|+++
T Consensus       160 ~~--g~~---~~--~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~  232 (296)
T 3e5z_A          160 PD--GTL---SA--PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIW  232 (296)
T ss_dssp             TT--SCE---EE--EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEE
T ss_pred             CC--CCE---EE--eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEE
Confidence            43  111   11  12334556899999999998777778899999987 4433 1111112344456778999999977


Q ss_pred             EEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE-ccCCCEEEEecCCC
Q psy17188        455 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI-SADGTKLWTGGLDN  503 (504)
Q Consensus       455 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-s~d~~~l~s~s~Dg  503 (504)
                      ++.  ++.|.+|+.+ ++.+..+..+.. +++++| +||++.|++++.++
T Consensus       233 v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~  278 (296)
T 3e5z_A          233 ASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE  278 (296)
T ss_dssp             EEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred             EEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence            766  7889999986 888888887777 999999 58999999888764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.74  E-value=9.8e-16  Score=155.39  Aligned_cols=266  Identities=13%  Similarity=0.039  Sum_probs=174.7

Q ss_pred             CCCCEEEEEeCCC-----cEEEEECCCCeEEEee------cCCCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCC
Q psy17188        213 PDSKVCFSCCSDG-----NIAVWDLHNQTLVRQF------QGHTDGASCIDISADGTKLWTGGLDN-----TVRSWDLRE  276 (504)
Q Consensus       213 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~  276 (504)
                      |+|++++....++     .+.+.+...++....+      .+|...+..++|+|||++|+.++.++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            7888776554322     3444444444432222      22444688999999999998765543     899999999


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCCcccee
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN----------------LSIWDLASPTPRIKA  340 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~v~d~~~~~~~~~~  340 (504)
                      ++....                ......+..++|+|||+.|+.+..++.                |++|++.++......
T Consensus       161 g~~~~~----------------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~  224 (710)
T 2xdw_A          161 AKELPD----------------VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL  224 (710)
T ss_dssp             TEEEEE----------------EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred             CCCCcc----------------cccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence            875311                111122567999999999999887765                999999876533222


Q ss_pred             --eeccCCCceeeEEECCCCCCceeeeccC---CCeEEEEecCC------CCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        341 --ELTSSAPACYALAISPDSKSPFFSSHHY---KSCVKVWDISQ------PGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       341 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~------~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                        ....+...+..+.|+||++.+++.+...   +..|.+||+..      +..  ....+.  .+...+.. .|+|+|+.
T Consensus       225 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~l~--~~~~~~~~-~~s~dg~~  299 (710)
T 2xdw_A          225 CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL--KWVKLI--DNFEGEYD-YVTNEGTV  299 (710)
T ss_dssp             EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--CCEEEE--CSSSSCEE-EEEEETTE
T ss_pred             EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--ceEEee--CCCCcEEE-EEeccCCE
Confidence              2233444578899999999644444322   67899999875      211  111111  22233333 58899998


Q ss_pred             EEEeeCC----CcEEEeeCCCCCcceeecccCC-C-CceeEEEECCCCCEEEEeeCCCc--EEEEEcCCcceEEEEeecC
Q psy17188        410 LIVGGEA----SNLSIWDLASPTPRIKAELTSS-A-PACYALAISPDSKVCFSCCSDGN--IAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       410 l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~-~-~~v~~l~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~h~  481 (504)
                      |+..+..    +.|.+||+.++.......+..+ . ..+..++|++++.++++...|+.  |++|++.+++.+..+..+.
T Consensus       300 l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~  379 (710)
T 2xdw_A          300 FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV  379 (710)
T ss_dssp             EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS
T ss_pred             EEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCC
Confidence            8776653    3599999987642111122222 2 36778899988888888888884  5667877888888888787


Q ss_pred             CceEEEEEccCCCEEEEe
Q psy17188        482 DGASCIDISADGTKLWTG  499 (504)
Q Consensus       482 ~~v~~~~~s~d~~~l~s~  499 (504)
                      +.+..+.++|+++.|+..
T Consensus       380 ~~v~~~~~s~d~~~l~~~  397 (710)
T 2xdw_A          380 GSVVGYSGQKKDTEIFYQ  397 (710)
T ss_dssp             SEEEEEECCTTCSEEEEE
T ss_pred             ceEEEEecCCCCCEEEEE
Confidence            889999999998776643

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.73  E-value=3.3e-15  Score=135.83  Aligned_cols=299  Identities=14%  Similarity=0.110  Sum_probs=192.6

Q ss_pred             EEEccCCCEEEEecC-----CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe----------CCCcEEE
Q psy17188        165 VKLLPDGRTLIVGGE-----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC----------SDGNIAV  229 (504)
Q Consensus       165 ~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~i  229 (504)
                      ....|+++.+++...     ++.|.++|..+.+.  ...+.....+ . ++++||+++++++.          .++.|.+
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v--~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv  113 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV--IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV  113 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE--EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE--EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence            445789999888865     57899999987664  3444433334 4 99999999888775          3678999


Q ss_pred             EECCCCeEEEeecCCC-------CCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        230 WDLHNQTLVRQFQGHT-------DGASCIDISADGTKLWTGGL--DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      ||..+.+.+..+....       .....+.++|||++++.+..  ++.|.++|+.++++..             .+..  
T Consensus       114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~-------------tI~v--  178 (386)
T 3sjl_D          114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR-------------MLDV--  178 (386)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE-------------EEEC--
T ss_pred             EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE-------------EEEC--
Confidence            9999999888875321       24567999999999888764  6899999999987531             1111  


Q ss_pred             cCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCcccee--eeccCCCcee-eEEEC-CCCCCceeeeccCCCeEEEE
Q psy17188        301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-PTPRIKA--ELTSSAPACY-ALAIS-PDSKSPFFSSHHYKSCVKVW  375 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~--~~~~~~~~i~-~~~~~-~~~~~~~~~~~~~~~~i~i~  375 (504)
                       ...  ...+....+.+++.+.||.+.+.++.. ++.....  .+......+. ...|. ++++. ++++  .++.+.+.
T Consensus       179 -~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~-~~vs--~~g~V~v~  252 (386)
T 3sjl_D          179 -PDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL-VWPT--YTGKIHQI  252 (386)
T ss_dssp             -CSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE-EEEB--TTSEEEEE
T ss_pred             -CCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE-EEEe--CCCEEEEE
Confidence             110  112222345566666777777777765 3221100  0011111221 23443 56642 3333  37899999


Q ss_pred             ecCCCCC--CCcccccc-----cccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCCCCCcceeecccCC
Q psy17188        376 DISQPGS--KTPVSQLD-----CLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSS  438 (504)
Q Consensus       376 d~~~~~~--~~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~  438 (504)
                      |+.....  ......+.     ..-.......++++++++.+++...          .+.|.++|+.+.+.+....... 
T Consensus       253 d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-  331 (386)
T 3sjl_D          253 DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-  331 (386)
T ss_dssp             ECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-
T ss_pred             ECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-
Confidence            9865431  11111000     0001122335788999998888653          2469999999988776665543 


Q ss_pred             CCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEEeecCCceEEEEEccC
Q psy17188        439 APACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  492 (504)
Q Consensus       439 ~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d  492 (504)
                        .+..|++++|++ +|++.. .++.|.++|..+++.+.++.. .+..+.|.+++|
T Consensus       332 --~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~d  384 (386)
T 3sjl_D          332 --EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ-LGHGPQVITTAD  384 (386)
T ss_dssp             --EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC-CCSSCCEEEECC
T ss_pred             --CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC-CCCCceeEECCc
Confidence              577889999997 666654 489999999999999999874 344556777776

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.72  E-value=4.1e-15  Score=135.73  Aligned_cols=271  Identities=10%  Similarity=0.030  Sum_probs=174.7

Q ss_pred             CCeEEEEeCCCCCCCCceee-eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE
Q psy17188        133 KGCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI  211 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  211 (504)
                      ++.|.+||.++++....+.. ............+.+. +++..++...++.|.+||..+++.  ...+. .......+++
T Consensus        16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~--~~~i~-~~~~p~~i~~   91 (328)
T 3dsm_A           16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE--VGRIT-GFTSPRYIHF   91 (328)
T ss_dssp             CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE--EEEEE-CCSSEEEEEE
T ss_pred             CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE--EEEcC-CCCCCcEEEE
Confidence            78999999987643222210 0000122346777774 455555666678999999997764  23333 3355789999


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEEee
Q psy17188        212 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       212 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~  284 (504)
                      +++++.+++...++.|.+||..+++....+....     .....+++ . +..|+.+.  .++.|.++|+.++++..   
T Consensus        92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~---  166 (328)
T 3dsm_A           92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD---  166 (328)
T ss_dssp             EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE---
T ss_pred             eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE---
Confidence            8888544444478999999999999887776433     14567777 3 44555444  48899999999987431   


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC----------CcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------SNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                                   ..........++++|+|+++++...+          +.|.++|..+.+......... ......+++
T Consensus       167 -------------~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~  232 (328)
T 3dsm_A          167 -------------ELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQL  232 (328)
T ss_dssp             -------------EEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEE
T ss_pred             -------------EEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEE
Confidence                         11122345678899999877666554          789999998764332222221 236889999


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC-CCCEEEEe----eCCCcEEEeeCCCCCc
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVG----GEASNLSIWDLASPTP  429 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~----~~dg~i~iwd~~~~~~  429 (504)
                      +|+++.++ ++. .  .|.+||..+...... ....  ........++++| ++.++++.    ..++.|.+||.. ++.
T Consensus       233 ~~d~~~ly-v~~-~--~v~~~d~~t~~~~~~-~~~~--~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~  304 (328)
T 3dsm_A          233 NGTRDTLY-WIN-N--DIWRMPVEADRVPVR-PFLE--FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL  304 (328)
T ss_dssp             CTTSCEEE-EES-S--SEEEEETTCSSCCSS-CSBC--CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred             ecCCCEEE-EEc-c--EEEEEECCCCceeee-eeec--CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence            99988533 332 2  888999876543211 1111  1145678999999 45555554    567899999988 665


Q ss_pred             ceeec
Q psy17188        430 RIKAE  434 (504)
Q Consensus       430 ~~~~~  434 (504)
                      +....
T Consensus       305 ~~~i~  309 (328)
T 3dsm_A          305 IDEFY  309 (328)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            54443

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.72  E-value=8.6e-15  Score=129.94  Aligned_cols=239  Identities=10%  Similarity=0.029  Sum_probs=168.1

Q ss_pred             cEEEEEEcCCCcEEE-Eec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188        115 VVCAVTISNPTKYVY-TGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~-~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ...++++++++++++ +.. ++.|.+|+..+...    .... ..+...+.+++++++++++++.. ++.|.+||.....
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~----~~~~-~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~   98 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT----TVLP-FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN   98 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECC-CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCccc----ceEe-eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence            668899999999887 534 88999999755321    1111 12335678999999999666665 8899999987643


Q ss_pred             ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        193 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ..  .........+..+++.++++++++...++.|.+|+..+.............+.+++++++++++++...++.|.+|
T Consensus        99 ~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~  176 (270)
T 1rwi_B           99 QT--VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL  176 (270)
T ss_dssp             CE--ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred             Ee--eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence            21  1111223568899999999877777778899999866554433333334567899999999877777778899999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      |.........               .......+..++++++|+.+++...++.|.+|+.......  .....+...+..+
T Consensus       177 ~~~~~~~~~~---------------~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~p~~i  239 (270)
T 1rwi_B          177 EAESNNQVVL---------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST--VLPFTGLNTPLAV  239 (270)
T ss_dssp             CTTTCCEEEC---------------CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE--ECCCCSCSCEEEE
T ss_pred             ecCCCceEee---------------cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce--eeccCCCCCceeE
Confidence            9887653211               1112255789999999987777777889999998664321  1122223468899


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      ++++++.  ++++...++.|+++++...
T Consensus       240 ~~~~~g~--l~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          240 AVDSDRT--VYVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             EECTTCC--EEEEEGGGTEEEEECCCGG
T ss_pred             EECCCCC--EEEEECCCCEEEEEcCCCc
Confidence            9999986  8888888999999998653

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.72  E-value=8.3e-15  Score=130.05  Aligned_cols=242  Identities=10%  Similarity=0.021  Sum_probs=168.8

Q ss_pred             ceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        205 ACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      ...++++++++++++ +...++.|.+||..+.........+...+.++++.++++++++.. ++.|.+||........+ 
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~-  102 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL-  102 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC-
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee-
Confidence            578899999998766 446788999999766554333233445788999999998666666 88999999877653211 


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                                    .......+..++++++|+.+++...++.|.+|+..+...  ..........+..++++++++  ++
T Consensus       103 --------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~--l~  164 (270)
T 1rwi_B          103 --------------PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGN--VY  164 (270)
T ss_dssp             --------------CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCC--EE
T ss_pred             --------------ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCC--EE
Confidence                          011224578999999999777777788999997654422  111222234678899999887  77


Q ss_pred             eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                      ++...++.|.+||........     ........+..++++++|.++++...++.|.+|+........  ....+...+.
T Consensus       165 v~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~~~~~~~p~  237 (270)
T 1rwi_B          165 VTDTDNNRVVKLEAESNNQVV-----LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LPFTGLNTPL  237 (270)
T ss_dssp             EEEGGGTEEEEECTTTCCEEE-----CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CCCCSCSCEE
T ss_pred             EEECCCCEEEEEecCCCceEe-----ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--eccCCCCCce
Confidence            777778899999976532111     011222567899999999877777778899999987543222  1222335688


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcCCcce
Q psy17188        444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTL  473 (504)
Q Consensus       444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~  473 (504)
                      +++++++|+++++...++.|+++++...+.
T Consensus       238 ~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          238 AVAVDSDRTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             EEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred             eEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence            999999999888888899999999876654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.71  E-value=3.4e-13  Score=121.51  Aligned_cols=281  Identities=10%  Similarity=0.087  Sum_probs=194.6

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .....+.++++.+++++.++.. ++.|.+||.. +.    +..+........+.++++.++++++++...++.|..||..
T Consensus        17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~   91 (300)
T 2qc5_A           17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR----IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK   91 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc----eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence            3456789999999999888876 8999999976 32    1222222334679999999999988877667889999987


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-eecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNT  268 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~  268 (504)
                       ++. ...........+.++++.++++++++...++.|..+|.. ++... .+......+.++++.+++++.++...++.
T Consensus        92 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~  168 (300)
T 2qc5_A           92 -GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS  168 (300)
T ss_dssp             -SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred             -CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence             443 222333334568999999999888777668899999987 55442 23334567899999999987777777889


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |..+|. +++...+..              ......+..++++++|+..++....+.|.+||. +++ ............
T Consensus       169 i~~~~~-~g~~~~~~~--------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~  231 (300)
T 2qc5_A          169 IGRITN-TGKLEEYPL--------------PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-ISEYDIPTPNAR  231 (300)
T ss_dssp             EEEECT-TCCEEEEEC--------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCC
T ss_pred             EEEECC-CCcEEEeeC--------------CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-EEEEECCCCCCC
Confidence            999998 555432211              122345789999999987777666778999998 332 222223334456


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      +..+++.+++.  ++++...++.|..||.. + .   ............+.+++++++|++.++.. . .|..+|.+
T Consensus       232 ~~~i~~d~~g~--l~v~~~~~~~i~~~~~~-g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~  299 (300)
T 2qc5_A          232 PHAITAGKNSE--IWFTEWGANQIGRITND-N-T---IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN  299 (300)
T ss_dssp             EEEEEECSTTC--EEEEETTTTEEEEECTT-S-C---EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred             ceEEEECCCCC--EEEeccCCCeEEEECCC-C-c---EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence            88999999987  66666667899999873 2 1   11111122345577899999998666554 4 67776643

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.70  E-value=1e-14  Score=132.63  Aligned_cols=300  Identities=13%  Similarity=0.127  Sum_probs=192.8

Q ss_pred             EEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcE
Q psy17188        120 TISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNL  183 (504)
Q Consensus       120 ~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i  183 (504)
                      ...|+++.+....      ++.|.+.|..+.+.   +..+.. + ..+  .++++|||++|++++          .++.|
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v---~~~I~v-G-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~V  111 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV---IGMIDG-G-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYV  111 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE---EEEEEE-C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE---EEEEEC-C-CCC--cEEECCCCCEEEEEcccccccccCCCCCEE
Confidence            3457776666553      46899999987533   233322 2 223  399999999998875          35789


Q ss_pred             EEEeCCCCCccceeeeec--C---cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccC
Q psy17188        184 SIWDLASPTPRIKAELTS--S---APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISAD  256 (504)
Q Consensus       184 ~iw~~~~~~~~~~~~~~~--~---~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  256 (504)
                      .+||..+.+......+..  +   ......++|+|||++++++..  ++.|.++|+.+++.+.++....  . ...+...
T Consensus       112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g  188 (386)
T 3sjl_D          112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTA  188 (386)
T ss_dssp             EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEE
T ss_pred             EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCC
Confidence            999999876533333321  0   112456899999999888864  6889999999999999886322  1 2223334


Q ss_pred             CCEEEEEcCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCce-EEEEEc-CCCCEEEEEeCCCcEEEEeCCC
Q psy17188        257 GTKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYI-RSVKLL-PDGRTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       257 ~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~-~~~~~l~~~~~dg~i~v~d~~~  333 (504)
                      .+.+++.+.||.+.+.++.. +++..  ....       .+.  .....+ ....|. ++|++++ .+.+|.+++.|..+
T Consensus       189 ~~~~~~~~~DG~~~~v~~~~~g~v~~--~~~~-------~~~--~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~  256 (386)
T 3sjl_D          189 PDTFFMHCRDGSLAKVAFGTEGTPEI--THTE-------VFH--PEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSS  256 (386)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCEE--EECC-------CCS--CTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTT
T ss_pred             CceeEEECCCCCEEEEECCCCCeEEE--eecc-------eec--cccccccccceeEcCCCcEEE-EeCCCEEEEEECCC
Confidence            56778888999999999986 55421  1100       000  001111 123554 5776555 55689999999976


Q ss_pred             CCccceeeec----------cCCCceeeEEECCCCCCceeeecc--------CCCeEEEEecCCCCCCCcccccccccCC
Q psy17188        334 PTPRIKAELT----------SSAPACYALAISPDSKSPFFSSHH--------YKSCVKVWDISQPGSKTPVSQLDCLQRD  395 (504)
Q Consensus       334 ~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~i~i~d~~~~~~~~~~~~~~~~~~~  395 (504)
                      ..........          ........++++++++.++++...        ..+.|.++|+.+.+....+..      .
T Consensus       257 ~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v------g  330 (386)
T 3sjl_D          257 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------G  330 (386)
T ss_dssp             SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------E
T ss_pred             CcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC------C
Confidence            6433222221          112244568889998875555431        135799999887544333322      2


Q ss_pred             CceEEEEEcCCCC-EEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCC
Q psy17188        396 NYIRSVKLLPDGR-TLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  450 (504)
Q Consensus       396 ~~i~~~~~s~~g~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~  450 (504)
                      ..+..+++++|++ +|++.. .++.|.++|..+++.+......+|...+   .+++|
T Consensus       331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l---~~s~d  384 (386)
T 3sjl_D          331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQV---ITTAD  384 (386)
T ss_dssp             EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCE---EEECC
T ss_pred             CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCcee---EECCc
Confidence            3577999999997 676654 4889999999999887777777765443   66665

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.68  E-value=1.1e-13  Score=127.94  Aligned_cols=270  Identities=13%  Similarity=0.059  Sum_probs=173.2

Q ss_pred             ECCCCCEEEEEeC--CC---cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECC
Q psy17188        211 ISPDSKVCFSCCS--DG---NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLR  275 (504)
Q Consensus       211 ~s~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~  275 (504)
                      ..|+++++++...  ..   .|.++|..+++.+..+.....+  .++++||+++++.+.          .++.|.+||..
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~  105 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence            4467777776653  22   7899999999998888754444  999999999998875          36789999998


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceee-eccCCCceeeE
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAE-LTSSAPACYAL  352 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~  352 (504)
                      +.+... .+.....       ...........+.++|||++|+++..  ++.|.++| .+++..  .. +...    .++
T Consensus       106 t~~~~~-~i~~~~~-------~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~~----~~~  170 (373)
T 2mad_H          106 TFLPIA-DIELPDA-------PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD--DQLLSSP----TCY  170 (373)
T ss_pred             CCcEEE-EEECCCc-------cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE--eEEcCCC----ceE
Confidence            766421 1100000       00001133568999999999999874  47899999 876432  22 2211    124


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc-cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD-CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      .+.|+++. .+++.+.|+.+.++|. .+.......... ............+.+++..++..+..+.+.+.|+.+.....
T Consensus       171 ~~~~~~~~-~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v  248 (373)
T 2mad_H          171 HIHPGAPS-TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN  248 (373)
T ss_pred             EEEeCCCc-eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence            55677665 4556667899999998 543221111000 01111112235567766665555578899999987553222


Q ss_pred             eeccc--C--------CCCceeEEEECCCCCEEEEeeC----------CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        432 KAELT--S--------SAPACYALAISPDSKVCFSCCS----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       432 ~~~~~--~--------~~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      ...+.  .        .......++++||++.+.++..          ++.|.++|+.+++.+.++.. ......++|+|
T Consensus       249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~  327 (373)
T 2mad_H          249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQ  327 (373)
T ss_pred             eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECC
Confidence            11111  0        1122334689999998887653          35799999999999999863 34689999999


Q ss_pred             CCC-EEEEec
Q psy17188        492 DGT-KLWTGG  500 (504)
Q Consensus       492 d~~-~l~s~s  500 (504)
                      ||+ .|+++.
T Consensus       328 Dg~~~l~v~~  337 (373)
T 2mad_H          328 DGGPDLYALS  337 (373)
T ss_pred             CCCeEEEEEc
Confidence            999 777766

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.68  E-value=3.5e-14  Score=125.56  Aligned_cols=220  Identities=11%  Similarity=0.146  Sum_probs=161.5

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP  292 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~  292 (504)
                      .+++|++++.++.|.+||.++++.+.++..+. ..+.++.+.|+|++++  +.++.|..||. +++ .+|++..      
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~------   73 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAA------   73 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEEC------
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcC------
Confidence            45689999999999999999999999998776 4789999999999888  45788999999 666 3444332      


Q ss_pred             cccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                             .....+.++.+.++|+++++.+. ++.+..+|.. ++  ..                                
T Consensus        74 -------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk--~l--------------------------------  111 (276)
T 3no2_A           74 -------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GE--VL--------------------------------  111 (276)
T ss_dssp             -------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SC--EE--------------------------------
T ss_pred             -------CCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CC--EE--------------------------------
Confidence                   11235778899999999998876 6666666542 21  11                                


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                       .-+.+.... .         .+......+++.++|+++++...++.|..||.+ ++.+.......   ....+.+.+++
T Consensus       112 -~~~~~~~~~-~---------~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~---~~~~~~~~~~g  176 (276)
T 3no2_A          112 -SKTEFETGI-E---------RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG---TPFSSAFLDNG  176 (276)
T ss_dssp             -EEEEECCSC-S---------SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS---CCCEEEECTTS
T ss_pred             -EEEeccCCC-C---------cccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC---CccceeEcCCC
Confidence             111111000 0         000112255778999999999999999999998 77766665542   34556888999


Q ss_pred             CEEEEeeCCCcEEEEEcCCcceEEEEeecC------CceEEEEEccCCCEEEEec
Q psy17188        452 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHT------DGASCIDISADGTKLWTGG  500 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~~~~s~d~~~l~s~s  500 (504)
                      +.++++..+++|..+|.++|+.+.++..+.      ..+..+...++|+.+++..
T Consensus       177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          177 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            999999888899999999999999887543      1278888999999888873

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.68  E-value=4.6e-15  Score=150.03  Aligned_cols=265  Identities=14%  Similarity=0.045  Sum_probs=167.2

Q ss_pred             CCCCCEEEEEeCCC---c--EEEEECCCCeEEEeec------CCCCCeEEEEEccCCCEEE-----EEcCCCeEEEEECC
Q psy17188        212 SPDSKVCFSCCSDG---N--IAVWDLHNQTLVRQFQ------GHTDGASCIDISADGTKLW-----TGGLDNTVRSWDLR  275 (504)
Q Consensus       212 s~~~~~l~~~~~dg---~--i~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~-----s~~~dg~i~~wd~~  275 (504)
                      +|+|++++....++   .  |.+.+...++....+.      +|...+..++|+|||++|+     .|+.+.+|++||+.
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            36888877766543   2  4445544554333222      3555789999999999988     44455789999999


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCCcc--cee
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-------------LSIWDLASPTPR--IKA  340 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~v~d~~~~~~~--~~~  340 (504)
                      +++...               ...........++|+|||+.|+.++.+..             |++|++.++...  ...
T Consensus       156 tg~~~~---------------~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~  220 (695)
T 2bkl_A          156 SGEWSK---------------VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH  220 (695)
T ss_dssp             TCCBCS---------------SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred             CCCCcC---------------CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence            987310               00001111257899999999999988765             999999887533  333


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccC--CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee---C
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHY--KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG---E  415 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~---~  415 (504)
                      ....+...+..+.|+||++.+++.+...  ...|.+++.....    ...+.  .+...+....+ ++|++++...   .
T Consensus       221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~  293 (695)
T 2bkl_A          221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAP  293 (695)
T ss_dssp             CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEEE--ECSSCCEEEEE-ETTEEEEEECTTCT
T ss_pred             ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEee--cCCCceEEEEe-cCCcEEEEECCCCC
Confidence            3344555788999999998643333322  2256666543221    11111  22334445556 5666444443   2


Q ss_pred             CCcEEEeeCCCCCcc-eeecccCC-CCceeEEEECCCCCEEEEeeCCCcEEEEEcC-CcceEEEEeec-CCceEEEEEcc
Q psy17188        416 ASNLSIWDLASPTPR-IKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGH-TDGASCIDISA  491 (504)
Q Consensus       416 dg~i~iwd~~~~~~~-~~~~~~~~-~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~~~~s~  491 (504)
                      ++.|.+||+.++... .......+ ...+..++|+ ++.++++...|+..+||.+. +++.+..+..+ .+.+..+.++|
T Consensus       294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~  372 (695)
T 2bkl_A          294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLE  372 (695)
T ss_dssp             TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCT
T ss_pred             CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCC
Confidence            578999999876531 11112222 4457788888 67788888999988888665 46666666655 56688889999


Q ss_pred             CCCEEEEe
Q psy17188        492 DGTKLWTG  499 (504)
Q Consensus       492 d~~~l~s~  499 (504)
                      |++.|+..
T Consensus       373 d~~~l~~~  380 (695)
T 2bkl_A          373 DLDDAYYV  380 (695)
T ss_dssp             TCSEEEEE
T ss_pred             CCCEEEEE
Confidence            99877643

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.67  E-value=1.5e-14  Score=134.01  Aligned_cols=281  Identities=14%  Similarity=0.120  Sum_probs=182.2

Q ss_pred             CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeeecC-
Q psy17188        134 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELTSS-  202 (504)
Q Consensus       134 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~-  202 (504)
                      +.|.++|..+.+.   +..+.. + ..+  .++++||+++|+++.          .++.|.++|..+.+......+.+. 
T Consensus        99 ~~VsVID~~t~~v---v~~I~v-G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~  171 (426)
T 3c75_H           99 TQQFVIDGSTGRI---LGMTDG-G-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP  171 (426)
T ss_dssp             EEEEEEETTTTEE---EEEEEE-C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred             CeEEEEECCCCEE---EEEEEC-C-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence            7999999988533   333332 2 233  899999999998886          367899999998765433333200 


Q ss_pred             ----cCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECC
Q psy17188        203 ----APACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       203 ----~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~  275 (504)
                          ......+.|+||+++|+++..  ++.|.+.|+.+++.+.++....  .  ....|++ ..+++.+.||.+.+.+..
T Consensus       172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~  247 (426)
T 3c75_H          172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFA  247 (426)
T ss_dssp             CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred             ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence                122346899999999998874  5789999999999998887422  1  2334433 566777788988888886


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEEC
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  355 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~  355 (504)
                      ++++.... . .       .+.. ........+.+.+++..++.....+.+.+.|...........              
T Consensus       248 ~~~v~~~~-~-~-------~~~v-~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~--------------  303 (426)
T 3c75_H          248 DGETKVTN-T-E-------VFHT-EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP--------------  303 (426)
T ss_dssp             TTCCEEEE-C-C-------CCSC-TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC--------------
T ss_pred             CCcEEEEe-e-e-------eecc-CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee--------------
Confidence            66543210 0 0       0000 001111235678898888888888899999886542111000              


Q ss_pred             CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC----------CCcEEEeeCC
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----------ASNLSIWDLA  425 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~iwd~~  425 (504)
                                         |.+.....   .. ..  ........++++|+++++++...          ++.|.++|..
T Consensus       304 -------------------~~~~~~~~---i~-~g--~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~  358 (426)
T 3c75_H          304 -------------------IEALTEAE---RA-DD--WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE  358 (426)
T ss_dssp             -------------------EESSCTTT---GG-GT--EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred             -------------------eeeccccc---cc-cc--cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence                               11000000   00 00  00011114688999888777643          3469999999


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCC-EEEEee-CCCcEEEEEcCCcceEEEE
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSK-VCFSCC-SDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~  477 (504)
                      +.+.+.......   ....++|+||++ ++++.. .++.|.++|+.+++.+.++
T Consensus       359 T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          359 TGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             TCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            887766665543   367789999999 888887 5899999999999999987

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.66  E-value=1.1e-13  Score=122.47  Aligned_cols=224  Identities=11%  Similarity=0.052  Sum_probs=158.4

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCc-CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-CC
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DG  247 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~  247 (504)
                      .+++|++++.++.|.+||.++++..  ..+..+. ..+.++.++|+|++++  +.++.|..||. +++.+..+..+. ..
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~   78 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIV--WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCE   78 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEE--EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEE--EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence            4678999999999999999877753  4444443 3578899999999888  35778999998 899999988653 57


Q ss_pred             eEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcE
Q psy17188        248 ASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  326 (504)
Q Consensus       248 v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  326 (504)
                      +.++.+.++|+.+++.+. ++.+..+|.....+..+......          .........+++.++|+++++...++.|
T Consensus        79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~----------~~~~~~~~~v~~~~~G~~lv~~~~~~~v  148 (276)
T 3no2_A           79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI----------ERPHAQFRQINKNKKGNYLVPLFATSEV  148 (276)
T ss_dssp             EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC----------SSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred             ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC----------CcccccccCceECCCCCEEEEecCCCEE
Confidence            889999999999999887 78888888744433333322110          0111234456789999999999999999


Q ss_pred             EEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc-cCCCceEEEEEcC
Q psy17188        327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLP  405 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~  405 (504)
                      ..||.+ ++........   .....+...+++.  +++++..++.|..+|..+++........... ..-..+..++..+
T Consensus       149 ~~~d~~-G~~~w~~~~~---~~~~~~~~~~~g~--~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~  222 (276)
T 3no2_A          149 REIAPN-GQLLNSVKLS---GTPFSSAFLDNGD--CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ  222 (276)
T ss_dssp             EEECTT-SCEEEEEECS---SCCCEEEECTTSC--EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred             EEECCC-CCEEEEEECC---CCccceeEcCCCC--EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence            999987 6544433332   2456677888887  7777777888999998765443222211100 1123477888889


Q ss_pred             CCCEEEEee
Q psy17188        406 DGRTLIVGG  414 (504)
Q Consensus       406 ~g~~l~~~~  414 (504)
                      +|..+++..
T Consensus       223 ~G~i~v~~~  231 (276)
T 3no2_A          223 NGGLYICNW  231 (276)
T ss_dssp             TSCEEEEEE
T ss_pred             CCCEEEEec
Confidence            998877763

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.65  E-value=2.1e-14  Score=146.17  Aligned_cols=286  Identities=10%  Similarity=0.055  Sum_probs=172.3

Q ss_pred             ccCCCEEEEecCCCc---EEEEe--CC---CCCcccee----eeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEE
Q psy17188        168 LPDGRTLIVGGEASN---LSIWD--LA---SPTPRIKA----ELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVW  230 (504)
Q Consensus       168 s~~~~~l~~~~~dg~---i~iw~--~~---~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw  230 (504)
                      +|+|++++....++.   -.+|.  ..   .++.....    ...++...+..++|||||++|+.+..+     ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            388888887654332   44454  33   33322111    112233468899999999998877653     359999


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe--------------EEEEECCCCceEEEeecCCCCCCCcccc
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT--------------VRSWDLREGCVKVWDISQPGSKTPVSQL  296 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~  296 (504)
                      |+.+++.+.... +...+..++|+|| +.|+.++.|+.              |++|++.++...-           ....
T Consensus       195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------~lv~  261 (741)
T 1yr2_A          195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-----------QPVF  261 (741)
T ss_dssp             ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-----------EEEE
T ss_pred             ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-----------EEEe
Confidence            999998765321 2222357899999 98888877654              8888887664100           0011


Q ss_pred             eecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--CC
Q psy17188        297 DCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--YK  369 (504)
Q Consensus       297 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~  369 (504)
                      ....+...+..+.|+|||++|+..+.++     .|++||+.++.......+..+....... ++|+++.+++.+..  .+
T Consensus       262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~  340 (741)
T 1yr2_A          262 ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPL  340 (741)
T ss_dssp             CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTT
T ss_pred             ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCC
Confidence            1112223578999999999988876543     7999998775211022233333333333 34888864444432  24


Q ss_pred             CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC-CCCcceeecccCCCCceeEEEEC
Q psy17188        370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA-SPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      ..|.+||+....  .....+. ..+...+..++++ ++.++++...++..+||.+. ++.......+ .....+..+.++
T Consensus       341 ~~l~~~d~~~~~--~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s  415 (741)
T 1yr2_A          341 KKIVRVDLSGST--PRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGR  415 (741)
T ss_dssp             CEEEEEECSSSS--CEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECC
T ss_pred             CEEEEEeCCCCc--cccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecC
Confidence            669999987642  1111111 1233456677887 66778888888887766544 2332222222 234568888999


Q ss_pred             CCCCEEEEe----eCCCcEEEEEcCCcc
Q psy17188        449 PDSKVCFSC----CSDGNIAVWDLHNQT  472 (504)
Q Consensus       449 ~~~~~l~s~----~~dg~i~iwd~~~~~  472 (504)
                      |+++.|+..    ...++|++||+.+++
T Consensus       416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          416 PGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             BTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             CCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            998866633    235789999998876

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.65  E-value=2.5e-14  Score=145.69  Aligned_cols=280  Identities=14%  Similarity=0.081  Sum_probs=173.3

Q ss_pred             cCCCcEEEEec-C-C--eEEEEeCCC----CCCCCceeeee--ecCCCCceEEEEEccCCCEEEEecCC-----CcEEEE
Q psy17188        122 SNPTKYVYTGG-K-G--CVKVWDISQ----PGSKTPVSQLD--CLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIW  186 (504)
Q Consensus       122 s~~~~~l~~~~-d-~--~i~vw~~~~----~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw  186 (504)
                      +|+|++++... + +  .-.+|....    +.....+....  ..++...+..++|||||++||.+..+     .+|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            38899888665 3 2  355665432    22222211111  11233468899999999999987543     469999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc--------------EEEEECCCCe----EEEeecCCCCCe
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN--------------IAVWDLHNQT----LVRQFQGHTDGA  248 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~iwd~~~~~----~~~~~~~h~~~v  248 (504)
                      |+.+++...   ...+...+..++|+|| +.|+.++.++.              |++|++.++.    .+.....+...+
T Consensus       195 dl~tg~~~~---~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~  270 (741)
T 1yr2_A          195 GVADGKPLA---DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG  270 (741)
T ss_dssp             ETTTCCEEE---EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred             ECCCCCCCC---ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence            999876422   1112222357899999 98888877654              8999997764    333334444568


Q ss_pred             EEEEEccCCCEEEEEcCCC-----eEEEEECCCC--c-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        249 SCIDISADGTKLWTGGLDN-----TVRSWDLREG--C-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      ..+.|+|||++|+..+.++     .|++||+.++  + ...              +  ..+....... ++|+|+.|+..
T Consensus       271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--------------l--~~~~~~~~~~-~~~dg~~l~~~  333 (741)
T 1yr2_A          271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA--------------L--IPDLKAQWDF-VDGVGDQLWFV  333 (741)
T ss_dssp             EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE--------------E--ECSSSSCEEE-EEEETTEEEEE
T ss_pred             EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE--------------e--cCCCCceEEE-EeccCCEEEEE
Confidence            8999999999888777543     8999998876  3 221              1  1112223333 34888888887


Q ss_pred             eCC----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        321 GEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       321 ~~d----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +.+    +.|.+||+.+........+..+...+..+++. ++.  ++++...++..++|.+.....  ....+. .....
T Consensus       334 s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~--lv~~~~~dg~~~l~~~~~~g~--~~~~l~-~~~~~  407 (741)
T 1yr2_A          334 SGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR--LFASYIHDAKSQVLAFDLDGK--PAGAVS-LPGIG  407 (741)
T ss_dssp             ECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE--EEEEEEETTEEEEEEEETTSC--EEEECB-CSSSC
T ss_pred             ECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE--EEEEEEECCEEEEEEEeCCCC--ceeecc-CCCCe
Confidence            653    45999998764211222233444456667776 332  778888888887776653211  111111 12356


Q ss_pred             ceEEEEEcCCCCEEEEe----eCCCcEEEeeCCCCC
Q psy17188        397 YIRSVKLLPDGRTLIVG----GEASNLSIWDLASPT  428 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~----~~dg~i~iwd~~~~~  428 (504)
                      .+..+.++|+++.|+..    ...++|++||+.+++
T Consensus       408 ~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          408 SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            68889999998866633    234679999998765

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.62  E-value=5.8e-13  Score=120.94  Aligned_cols=249  Identities=9%  Similarity=0.072  Sum_probs=163.3

Q ss_pred             CcCceEEEEECCCCCEEEE-------EeCCCcEEEEECCCCeEEEeec----CCCCCeEEEEEccC-CCEEEEEcCCCeE
Q psy17188        202 SAPACYALAISPDSKVCFS-------CCSDGNIAVWDLHNQTLVRQFQ----GHTDGASCIDISAD-GTKLWTGGLDNTV  269 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~s~~~dg~i  269 (504)
                      ......+++|++++.++++       ...++.|.+||..+++......    ++...+.+++++++ ++++++.. ++.|
T Consensus        16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l   94 (314)
T 1pjx_A           16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL   94 (314)
T ss_dssp             CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred             cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence            3344678999999987777       5778899999988877543222    24567899999999 65555444 4579


Q ss_pred             EEEECCCCceEEE-eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCC
Q psy17188        270 RSWDLREGCVKVW-DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------------SNLSIWDLAS  333 (504)
Q Consensus       270 ~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~v~d~~~  333 (504)
                      .+||.. ++...+ ...           ........+.+++++++|+++++...+               +.|..|+.. 
T Consensus        95 ~~~d~~-g~~~~~~~~~-----------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-  161 (314)
T 1pjx_A           95 LVVQTD-GTFEEIAKKD-----------SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-  161 (314)
T ss_dssp             EEEETT-SCEEECCSBC-----------TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred             EEEeCC-CCEEEEEecc-----------CCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence            999998 765321 100           000122457899999999877776554               467777755 


Q ss_pred             CCccceeeeccCCCceeeEEEC----CCCCCceeeeccCCCeEEEEecCCCCCCCccccc-ccccCC-CceEEEEEcCCC
Q psy17188        334 PTPRIKAELTSSAPACYALAIS----PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL-DCLQRD-NYIRSVKLLPDG  407 (504)
Q Consensus       334 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~-~~i~~~~~s~~g  407 (504)
                      ++..   ...........++++    ++++. ++++...++.|.+||............. ....+. ..+..++++++|
T Consensus       162 g~~~---~~~~~~~~~~~i~~~~~~d~dg~~-l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G  237 (314)
T 1pjx_A          162 GQMI---QVDTAFQFPNGIAVRHMNDGRPYQ-LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN  237 (314)
T ss_dssp             SCEE---EEEEEESSEEEEEEEECTTSCEEE-EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred             CCEE---EeccCCCCcceEEEecccCCCCCE-EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence            3221   111222345788899    88863 4556567889999997621111000111 111122 457789999999


Q ss_pred             CEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE-EeeCCCcEEEEEcCC
Q psy17188        408 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHN  470 (504)
Q Consensus       408 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~-s~~~dg~i~iwd~~~  470 (504)
                      +++++...++.|.+||.++++......  .+...+.+++|+++++.|. +...++.|..|++..
T Consensus       238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          238 NLLVANWGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CEEEEEETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CEEEEEcCCCEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            988887778899999988665444333  3345688999999999555 445567899999864

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.61  E-value=1.3e-12  Score=117.41  Aligned_cols=234  Identities=9%  Similarity=0.108  Sum_probs=157.3

Q ss_pred             cCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        242 QGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      ..+..-..+..|+++ +.++++...++.|..||..+++...+                 .....+.+++++++|+++++ 
T Consensus         9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-----------------~~~~~~~~i~~~~dG~l~v~-   70 (297)
T 3g4e_A            9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-----------------TMDAPVSSVALRQSGGYVAT-   70 (297)
T ss_dssp             CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-----------------ECSSCEEEEEEBTTSSEEEE-
T ss_pred             ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-----------------eCCCceEEEEECCCCCEEEE-
Confidence            334445678899995 44666667789999999998865332                 22356889999999995444 


Q ss_pred             eCCCcEEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccC---------CCeEEEEecCCCCCCCccccc
Q psy17188        321 GEASNLSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHY---------KSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       321 ~~dg~i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      . +..|.+||.++++.........  ....+..+++.|+++  ++++...         ...-.+|.+........    
T Consensus        71 ~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~----  143 (297)
T 3g4e_A           71 I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFPDHHVKK----  143 (297)
T ss_dssp             E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE----
T ss_pred             E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEECCCCEEE----
Confidence            4 5679999988764333322211  223578899999998  4443321         12345555543221111    


Q ss_pred             ccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeC--CCCCcc---eeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        390 DCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDL--ASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       390 ~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~--~~~~~~---~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                       ........+.++|+||++.|+. .+.++.|.+|++  .++...   ....+.........++++++|++.++...++.|
T Consensus       144 -~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v  222 (297)
T 3g4e_A          144 -YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV  222 (297)
T ss_dssp             -EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred             -EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence             1122234578999999987755 455788999987  344321   112222233457789999999988888888899


Q ss_pred             EEEEcCCcceEEEEeecCCceEEEEEc-cCCCEEEEecC
Q psy17188        464 AVWDLHNQTLVRQFQGHTDGASCIDIS-ADGTKLWTGGL  501 (504)
Q Consensus       464 ~iwd~~~~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s~  501 (504)
                      .+||.++++.+..+..+...+++++|. ||++.|+..+.
T Consensus       223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence            999999999999998877789999998 88887765543

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.60  E-value=3.2e-13  Score=123.43  Aligned_cols=186  Identities=17%  Similarity=0.170  Sum_probs=136.2

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCC-----CCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGS-----KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      .+..+++++...++++++...+++|+++....     ...+.......+.. |+.++|  |+++|+++ .++.|++||+.
T Consensus        39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence            57899999999999999966788898654220     00011111124556 999999  99999999 88999999998


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      +...  ......+...+.++.+.+..  +++++.||.|.+||+.+++...    +...|+|++|+|+|  ++.|..||++
T Consensus       115 sl~~--~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i  184 (388)
T 1xip_A          115 ELSE--FRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF  184 (388)
T ss_dssp             STTC--EEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred             hhhc--cCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence            6552  34456677778888877653  8888999999999999887654    45689999999999  6789999999


Q ss_pred             EEEECCCCceE-EEeecCCCCCCCcccce-ecccCCceEEEEEcCCCCEEEEE
Q psy17188        270 RSWDLREGCVK-VWDISQPGSKTPVSQLD-CLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       270 ~~wd~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      ++|+...+++. ...+..+.      .+. ...+...|.++.|.+++.++++=
T Consensus       185 ~~~~~~~~~~~~k~~I~~Pp------~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          185 QSFAWRNGEMEKQFEFSLPS------ELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             EEEEEETTEEEEEEEECCCH------HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             EEEcCCCccccccceecCCc------ccccccCCCeeEEEEEEecCCeEEEEE
Confidence            99999887742 11121110      110 11356889999999999888763

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.59  E-value=1.3e-13  Score=127.76  Aligned_cols=269  Identities=13%  Similarity=0.100  Sum_probs=171.4

Q ss_pred             CCCCEEEEEeCC-----CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCC
Q psy17188        213 PDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREG  277 (504)
Q Consensus       213 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~  277 (504)
                      ++++.+++....     +.|.++|+.+++.+.++..-..+  .+.++||+++|+.+.          .++.|.++|..++
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            466666666543     68999999999999999865555  899999999888776          3678999999998


Q ss_pred             ceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        278 CVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      +... ..+....         ..........+.++|||++++++..  ++.|.+.|+.+.+.........      +...
T Consensus       160 ~vv~~I~v~g~~---------r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~~~~  224 (426)
T 3c75_H          160 LPIADIELPDAP---------RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------CYHI  224 (426)
T ss_dssp             CEEEEEEETTCC---------CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEE
T ss_pred             cEEEEEECCCcc---------ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------ceee
Confidence            7531 1110000         0001123567899999999999874  5789999999875433332211      1233


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcc-cccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      .|+++. .+++.+.|+.+.+.+.......... ..+.. ........+.+++++..++.....+.+.+.|..........
T Consensus       225 ~p~g~~-~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v-~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~  302 (426)
T 3c75_H          225 FPASPT-VFYMNCRDGSLARVDFADGETKVTNTEVFHT-EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRA  302 (426)
T ss_dssp             EEEETT-EEEEEETTSSEEEEECCTTCCEEEECCCCSC-TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECC
T ss_pred             ccCCCc-EEEEEcCCCCEEEEECCCCcEEEEeeeeecc-CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEee
Confidence            444443 4444555666666666322111000 00000 00111124578999888888788899999998654322111


Q ss_pred             ccc----------CCCCceeEEEECCCCCEEEEeeC----------CCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188        434 ELT----------SSAPACYALAISPDSKVCFSCCS----------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  493 (504)
Q Consensus       434 ~~~----------~~~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~  493 (504)
                      ...          ........++++||++.+++...          ++.|.++|+.+.+.+.++... .....+.|+|||
T Consensus       303 ~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg  381 (426)
T 3c75_H          303 PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDA  381 (426)
T ss_dssp             CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSS
T ss_pred             eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCC
Confidence            100          00111123589999988777642          357999999999999998743 358899999999


Q ss_pred             C-EEEEecC
Q psy17188        494 T-KLWTGGL  501 (504)
Q Consensus       494 ~-~l~s~s~  501 (504)
                      + +|+++..
T Consensus       382 ~~~lyv~n~  390 (426)
T 3c75_H          382 EPLLYALSA  390 (426)
T ss_dssp             SCEEEEEET
T ss_pred             CEEEEEEcC
Confidence            9 8888764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.58  E-value=1e-12  Score=119.25  Aligned_cols=240  Identities=10%  Similarity=0.076  Sum_probs=154.5

Q ss_pred             cceEEEECCCCCcccC-------CCCCCcccCCCCCccccceeee----cCCCcEEEEEEcCC-CcEEEEecCCeEEEEe
Q psy17188         73 PAYSYHVTTDGQMQPV-------PFPPDALIGPGIPRHARQINTL----SHGEVVCAVTISNP-TKYVYTGGKGCVKVWD  140 (504)
Q Consensus        73 ~v~~~~~s~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~v~~s~~-~~~l~~~~d~~i~vw~  140 (504)
                      .+..++|+++|++...       ...++.+..++...........    ++...+.+++++++ ++++++..++.|.+||
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d   98 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence            4556667777765555       4445556655433222111111    25567899999999 8877777666899999


Q ss_pred             CCCCCCCCce-eeeeecCCCCceEEEEEccCCCEEEEecCC---------------CcEEEEeCCCCCccceeeeecCcC
Q psy17188        141 ISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------------SNLSIWDLASPTPRIKAELTSSAP  204 (504)
Q Consensus       141 ~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------g~i~iw~~~~~~~~~~~~~~~~~~  204 (504)
                      .+ +.. ..+ ...........+.+++++++|+++++...+               +.|..|+.. ++.   ..+..+..
T Consensus        99 ~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~~~~~~~~  172 (314)
T 1pjx_A           99 TD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM---IQVDTAFQ  172 (314)
T ss_dssp             TT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE---EEEEEEES
T ss_pred             CC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE---EEeccCCC
Confidence            87 432 111 100000123458899999999887776544               467777654 332   22223334


Q ss_pred             ceEEEEEC----CCCCEEEEE-eCCCcEEEEECC-CCe-----EEEeecCCC-CCeEEEEEccCCCEEEEEcCCCeEEEE
Q psy17188        205 ACYALAIS----PDSKVCFSC-CSDGNIAVWDLH-NQT-----LVRQFQGHT-DGASCIDISADGTKLWTGGLDNTVRSW  272 (504)
Q Consensus       205 ~v~~~~~s----~~~~~l~~~-~~dg~i~iwd~~-~~~-----~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~w  272 (504)
                      ....++|+    ++++.|+.+ ..++.|.+||++ +++     ....+..+. ..+..++++++|+++++...++.|.+|
T Consensus       173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~  252 (314)
T 1pjx_A          173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF  252 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence            46789999    999765555 467899999986 454     233344444 668899999999888887788999999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCC
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS  333 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~  333 (504)
                      |.++++..               .....+...+.+++++++++.|+++ ..++.|..|++..
T Consensus       253 d~~~g~~~---------------~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          253 GPDGGQPK---------------MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CTTCBSCS---------------EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             cCCCCcEe---------------EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            98866521               1111223568999999999966555 4567899998764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.56  E-value=6.9e-12  Score=112.64  Aligned_cols=235  Identities=11%  Similarity=0.140  Sum_probs=152.5

Q ss_pred             ceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        205 ACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       205 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      -..+..|++++. ++++...++.|..||..+++. ..+. ....+.+++++++++++++ . ++.|.+||.++++...+.
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~   89 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA   89 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence            355788999544 566666788999999988765 3333 4578999999999985554 3 568999999988765432


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      ....           ......+..++++|+|+++++....         ..-.+|.+.... .. ............++|
T Consensus        90 ~~~~-----------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~-~~~~~~~~~pngi~~  156 (297)
T 3g4e_A           90 TVDN-----------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HV-KKYFDQVDISNGLDW  156 (297)
T ss_dssp             ECCT-----------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CE-EEEEEEESBEEEEEE
T ss_pred             ecCC-----------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CE-EEEeeccccccceEE
Confidence            1110           0123457889999999966654321         223444443221 11 112222335678999


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCC-CCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQ-PGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      +|+++. ++++.+.++.|.+|++.. .........+ ...........++++++|++.++....+.|..||..+++....
T Consensus       157 spdg~~-lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~  235 (297)
T 3g4e_A          157 SLDHKI-FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT  235 (297)
T ss_dssp             CTTSCE-EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred             cCCCCE-EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence            999985 556667788999999742 1111111111 1112234677999999998877777788899999987765554


Q ss_pred             ecccCCCCceeEEEEC-CCCCEEEEeeC
Q psy17188        433 AELTSSAPACYALAIS-PDSKVCFSCCS  459 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s-~~~~~l~s~~~  459 (504)
                      ...  +...+++++|. ||++.|..++.
T Consensus       236 i~~--p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          236 VKL--PVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEC--SSSBEEEEEEESGGGCEEEEEEB
T ss_pred             EEC--CCCCceEEEEeCCCCCEEEEEcC
Confidence            443  34568999998 88887765544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.55  E-value=5.6e-12  Score=118.19  Aligned_cols=247  Identities=13%  Similarity=0.074  Sum_probs=164.1

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC--eEEEEECCCCce-EE
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN--TVRSWDLREGCV-KV  281 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~-~~  281 (504)
                      ....++|+++++++++...++.|++||..+++......... ... ++|+++++.|+++..++  .|.+++...+.. ..
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~  209 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR  209 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence            46789999999877777777899999999887766655433 334 99999999998888766  788888876542 11


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee--eccCCCce-e-eEEECCC
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE--LTSSAPAC-Y-ALAISPD  357 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~~i-~-~~~~~~~  357 (504)
                      ..           . ........+.+++++|++..|+++..++.|+.||..+........  ........ . .++++|+
T Consensus       210 ~g-----------~-~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~  277 (409)
T 3hrp_A          210 IG-----------Q-LGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV  277 (409)
T ss_dssp             EE-----------E-CCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred             ee-----------e-ccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC
Confidence            00           0 001134557889999965566667778899999998764222211  11111112 3 8999996


Q ss_pred             CCCceeeeccCCCeEEEEecCCCCCCCccccc----------ccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCC
Q psy17188        358 SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL----------DCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS  426 (504)
Q Consensus       358 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----------~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~  426 (504)
                      +.. ++++...++.|+.|+....  ...+...          .....-.....++++++|+++++-. .++.|+.|++.+
T Consensus       278 ~g~-lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~  354 (409)
T 3hrp_A          278 DSN-FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD  354 (409)
T ss_dssp             TTE-EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred             CCE-EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence            544 6777778889999987542  0000000          0001123477999999999777776 788999999766


Q ss_pred             CCcceeeccc------------CCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        427 PTPRIKAELT------------SSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       427 ~~~~~~~~~~------------~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      +.........            ........+++++++.++++-..+++|+.+++
T Consensus       355 G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          355 GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            6432221110            11235788999999888888778888888775

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.53  E-value=2e-12  Score=129.42  Aligned_cols=356  Identities=12%  Similarity=0.130  Sum_probs=185.8

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeec----CCC-Cce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL----QRD-NYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~-~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  197 (504)
                      ++++++++.++.|.-+|.++++..-....-...    ... ..+ ..+..  ++..|++++.|+.|..+|.++++.....
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence            344455445777888887776433222110000    000 000 11222  4567888889999999999998865444


Q ss_pred             eeecCcCceEEEEECC---CCCEEEEEe------CCCcEEEEECCCCeEEEeecCCC-----------------------
Q psy17188        198 ELTSSAPACYALAISP---DSKVCFSCC------SDGNIAVWDLHNQTLVRQFQGHT-----------------------  245 (504)
Q Consensus       198 ~~~~~~~~v~~~~~s~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~h~-----------------------  245 (504)
                      ....+......+..+|   ++ .+++++      .++.|+.||.++|+.+..+....                       
T Consensus       148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~  226 (689)
T 1yiq_A          148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA  226 (689)
T ss_dssp             ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred             cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence            4320111111111122   44 444443      36899999999999988765210                       


Q ss_pred             --------CCeEEEEEccCCCEEEEEcCCCe-------------------EEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        246 --------DGASCIDISADGTKLWTGGLDNT-------------------VRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       246 --------~~v~~~~~~~~~~~l~s~~~dg~-------------------i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                              .....++++|+..+++.+..++.                   |..+|.++|+. +|.........     ..
T Consensus       227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~-----wd  300 (689)
T 1yiq_A          227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDA-----WD  300 (689)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCC-----SC
T ss_pred             eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCccc-----cc
Confidence                    01125778888889999888764                   99999999985 35443221100     00


Q ss_pred             cccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeeccCC-----------------------------
Q psy17188        299 LQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTSSA-----------------------------  346 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-----------------------------  346 (504)
                      ......+.......+|+   .++.++.+|.++++|.++++......+....                             
T Consensus       301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~  380 (689)
T 1yiq_A          301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL  380 (689)
T ss_dssp             CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred             ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence            00111122222223554   7888999999999999998654322221100                             


Q ss_pred             --------CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC---CCEEEEeeC
Q psy17188        347 --------PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRTLIVGGE  415 (504)
Q Consensus       347 --------~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---g~~l~~~~~  415 (504)
                              ..-..++++|+..  ++.+...+....++.............   ......  .+...|.   +........
T Consensus       381 ~~p~~~Gg~~w~~~a~dp~~~--~~yv~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~--~~~~~p~~~~~~~~~~~~~  453 (689)
T 1yiq_A          381 VTPAFWGAHDWQPMSYNPDTG--LVYIPAHIMSAYYEHIPEAPKRNPFKS---MYQLGL--RTGMMPEGAEGLLEMAKSW  453 (689)
T ss_dssp             ESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEEECCSSCCCCCSCTT---SCCCSS--EECCCCSSHHHHHHHHTTC
T ss_pred             eCCCcccccCCCcceECCCCC--EEEEeccccceeeeecccccccccccc---ccccCc--cccccCcccccCCCCCCCc
Confidence                    0001133333333  222222222222222111000000000   000000  0000000   000000001


Q ss_pred             CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCC
Q psy17188        416 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGT  494 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~  494 (504)
                      +|.|+.||+.+++.+........   ...-.+...+.+++.++.||.++.||.++|+++.+++...+. ..-+.|..||+
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~  530 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE  530 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ceeEEEEECCCCCeEeEccCCCC---ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence            47799999999887766554332   222255567889999999999999999999999988754332 24567778887


Q ss_pred             EEEE
Q psy17188        495 KLWT  498 (504)
Q Consensus       495 ~l~s  498 (504)
                      ..++
T Consensus       531 qyv~  534 (689)
T 1yiq_A          531 QYVT  534 (689)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4433

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.53  E-value=5.3e-12  Score=118.38  Aligned_cols=247  Identities=9%  Similarity=0.050  Sum_probs=161.4

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC--cEEEEECCCCeE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--NIAVWDLHNQTL  237 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~  237 (504)
                      .....++|+++++++++...++.|++||..++...  ..... ..... ++|+++++.|+++..++  .|.+|+...+..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~--~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~  206 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT--TVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA  206 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE--EEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE--Eeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence            45789999999997777777899999999865532  22222 22233 99999999998888766  788998876544


Q ss_pred             EEee----cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc-e-EEEEEc
Q psy17188        238 VRQF----QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY-I-RSVKLL  311 (504)
Q Consensus       238 ~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v-~~~~~~  311 (504)
                      ...+    ......+.+++++|++..|+.+..++.|+.||..++....+....           ....... . ..++|+
T Consensus       207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~-----------~~g~~~~~P~~~ia~~  275 (409)
T 3hrp_A          207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE-----------LSGSLGTNPGPYLIYY  275 (409)
T ss_dssp             EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC-----------CCSCCCCSSCCEEEEE
T ss_pred             eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc-----------ccCCCCCCccccEEEe
Confidence            3333    224567789999995556666777899999999987654432110           0011111 1 289999


Q ss_pred             CC-CCEEEEEeCCCcEEEEeCCCCCccceeeec------------cCCCceeeEEECCCCCCceeeecc-CCCeEEEEec
Q psy17188        312 PD-GRTLIVGGEASNLSIWDLASPTPRIKAELT------------SSAPACYALAISPDSKSPFFSSHH-YKSCVKVWDI  377 (504)
Q Consensus       312 ~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~-~~~~i~i~d~  377 (504)
                      |+ +.++++-..++.|+.|+..... ....-..            ..-.....+++++++.  ++++.. .++.|+.|+.
T Consensus       276 p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~--lyvad~~~~~~I~~~~~  352 (409)
T 3hrp_A          276 FVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN--FYIVDGFKGYCLRKLDI  352 (409)
T ss_dssp             TTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC--EEEEETTTTCEEEEEET
T ss_pred             CCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC--EEEEeCCCCCEEEEEEC
Confidence            95 5555555667889999876431 1110000            0023478899999988  777777 8999999996


Q ss_pred             CCCCCCCcccc---------cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        378 SQPGSKTPVSQ---------LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       378 ~~~~~~~~~~~---------~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      ..+........         ......-.....++++++|.++++-..++.|+.+++
T Consensus       353 ~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          353 LDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            54321100000         000011245789999999887777777888887764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.52  E-value=4.7e-10  Score=115.23  Aligned_cols=401  Identities=9%  Similarity=0.071  Sum_probs=239.8

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCC--C---cEEEEEEcCCCcEEEEecCCeEEEEeCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHG--E---VVCAVTISNPTKYVYTGGKGCVKVWDISQPG  145 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~---~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~  145 (504)
                      ...|.++...++|.+-... . +.+..++...  .....+.+.  .   .|.++...+++++.+.+. +.|..|+.+++.
T Consensus        87 ~n~I~~i~~d~~g~lWigT-~-~Gl~~yd~~~--~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~  161 (795)
T 4a2l_A           87 NDISRIVKTDSQGRVWIGT-R-DGLSRYDEEK--DIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKESK  161 (795)
T ss_dssp             CSCEEEEEECTTSCEEEEE-S-SCEEEEETTT--TEEEEECCEETTEECCCCEEEEEETTEEEEEET-TEEEEEETTTTE
T ss_pred             ccceeEEEECCCCCEEEEe-C-CchheeCCCC--CeEEeccccccCCCceEEEEEECCCCCEEEEEC-CceEEEECCCCE
Confidence            3468888888787654333 2 4455544321  122222211  1   188898888998877665 568899976531


Q ss_pred             CCCceeeeeecCCCCc-eEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC
Q psy17188        146 SKTPVSQLDCLQRDNY-IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       146 ~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                          +..+........ |.++...+++++.+ ++.++.|..|+..+.+..... .......|.++...+++.+.+ ++.+
T Consensus       162 ----~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~-~~~~~~~i~~i~~d~~g~lwi-gt~~  234 (795)
T 4a2l_A          162 ----FIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI-PILGTKQIQAILQQSPTRIWV-ATEG  234 (795)
T ss_dssp             ----EECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEE-EEBS
T ss_pred             ----EEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec-CCCCCCeeEEEEEcCCCCEEE-EECC
Confidence                111110000123 88888888886555 555556899998765432211 112345688888877776544 5544


Q ss_pred             CcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccce
Q psy17188        225 GNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLD  297 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~  297 (504)
                      +-+..||..+++.......       ....|.++...++|.+. .|+.+ -|.+||..+++...+......        .
T Consensus       235 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~--------~  304 (795)
T 4a2l_A          235 AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVE--------N  304 (795)
T ss_dssp             SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTS--------T
T ss_pred             CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCC--------C
Confidence            4599999888765443221       23569999998888644 45555 588999988876543221100        0


Q ss_pred             ecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec----cCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        298 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT----SSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       298 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                      .......|.++...++|+ |.+|+.++-|..|+.............    .....|.++...+++.   +..+..++-+.
T Consensus       305 ~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~---lWiGt~~~Gl~  380 (795)
T 4a2l_A          305 GSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN---LWIGTNDGGLN  380 (795)
T ss_dssp             TSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC---EEEEESSSCEE
T ss_pred             CCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC---EEEEECCCCeE
Confidence            011245689999999887 566777777888886554322111111    1234688888887775   55566677788


Q ss_pred             EEecCCCCCCCccccc-c-c-ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc--cCCCCceeEEEEC
Q psy17188        374 VWDISQPGSKTPVSQL-D-C-LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL--TSSAPACYALAIS  448 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~-~-~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s  448 (504)
                      .|+............. . . ......|.+++..++|+.|.+|+.++.|..||..+++.......  ......|.++...
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d  460 (795)
T 4a2l_A          381 LYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD  460 (795)
T ss_dssp             EECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEEC
T ss_pred             EEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEEC
Confidence            8887643211100000 0 0 01245688999999988667777777799999887653322211  1223568899999


Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCcceEEEEee------cCCceEEEEEccCCCEEEEe
Q psy17188        449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG------HTDGASCIDISADGTKLWTG  499 (504)
Q Consensus       449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~s~d~~~l~s~  499 (504)
                      +++++.+.. .+| +.+||..+++.......      ....|.++...++|+..+..
T Consensus       461 ~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt  515 (795)
T 4a2l_A          461 GEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG  515 (795)
T ss_dssp             SSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred             CCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence            888866654 344 89999887654332111      23568999999888766544

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.52  E-value=1.9e-12  Score=129.32  Aligned_cols=320  Identities=12%  Similarity=0.081  Sum_probs=197.2

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC---------ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      +..|++++.++.|..+|..+++............         ....+++  ++..+++++.|+.|..+|.++|+.+..+
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            4456666667888888888776544443332110         0112233  4557888889999999999999999888


Q ss_pred             cCC-C----CCeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCCCCC--Cc--------------
Q psy17188        242 QGH-T----DGASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPGSKT--PV--------------  293 (504)
Q Consensus       242 ~~h-~----~~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~--~~--------------  293 (504)
                      ..+ .    ..+.+ ...  .+..++.++.      ++.|+.+|..+|+. +|.........  +.              
T Consensus       155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~~~~~~~~~~~~~g~~~w~~  231 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGER-KWRWFSVPGDPSKPFEDESMKRAARTWDP  231 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred             cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcE-EEEeccCCCCccccccccccccccccccc
Confidence            754 2    11211 111  1345555543      79999999999985 45554322110  00              


Q ss_pred             -cc-ceecccCCceEEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCCccceeeeccCC------
Q psy17188        294 -SQ-LDCLQRDNYIRSVKLLPDGRTLIVGGEAS-------------------NLSIWDLASPTPRIKAELTSSA------  346 (504)
Q Consensus       294 -~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~~~~~------  346 (504)
                       .. ............+++++++..++++..++                   .|..+|.++++.........+.      
T Consensus       232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~  311 (677)
T 1kb0_A          232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS  311 (677)
T ss_dssp             GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred             cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence             00 00001122234678899999999887664                   4999999998766555543331      


Q ss_pred             -CceeeEEECCCCC-CceeeeccCCCeEEEEecCCCCCCCccccccc-----c-cCC-----------------------
Q psy17188        347 -PACYALAISPDSK-SPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC-----L-QRD-----------------------  395 (504)
Q Consensus       347 -~~i~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-----~-~~~-----------------------  395 (504)
                       .....+....+++ ...++.++.+|.+.++|..+++..........     . ...                       
T Consensus       312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G  391 (677)
T 1kb0_A          312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG  391 (677)
T ss_dssp             CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred             CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence             1122223333552 12688888999999999987654222111000     0 000                       


Q ss_pred             -CceEEEEEcCCCCEEEEeeC-------------------------------------------CCcEEEeeCCCCCcce
Q psy17188        396 -NYIRSVKLLPDGRTLIVGGE-------------------------------------------ASNLSIWDLASPTPRI  431 (504)
Q Consensus       396 -~~i~~~~~s~~g~~l~~~~~-------------------------------------------dg~i~iwd~~~~~~~~  431 (504)
                       ..-..++++|++.++++...                                           .|.|..||+.+++.+.
T Consensus       392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W  471 (677)
T 1kb0_A          392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW  471 (677)
T ss_dssp             SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence             00125789999888887543                                           1679999999988766


Q ss_pred             eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecC-CceEEEEEccCCCEEEE
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISADGTKLWT  498 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l~s  498 (504)
                      ......   .+....+..++..++.++.||.+++||.++++++.++.... ....-+.|..+|+.++.
T Consensus       472 ~~~~~~---~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          472 SVEHVS---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             EEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ecCCCC---CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence            655432   22333566678889999999999999999999999987443 22345567788875544

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.52  E-value=3.7e-12  Score=116.96  Aligned_cols=264  Identities=14%  Similarity=0.113  Sum_probs=161.0

Q ss_pred             CceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEee-------cCCCCCeEEEEEccCCCEEEEEcC-----CCeE
Q psy17188        204 PACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQF-------QGHTDGASCIDISADGTKLWTGGL-----DNTV  269 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i  269 (504)
                      .....++++++|+++++..  .++.++||.+.+++.. .+       ..+...+.+++++++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            5688999999999888864  2343555555466543 22       235568999999999876555433     5789


Q ss_pred             EEEECCCCc-eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-e---CCCcEEEEeCCCCCccceeeecc
Q psy17188        270 RSWDLREGC-VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-G---EASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       270 ~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .+||+.+++ .+.+......          ......+..+++++++..++++ .   .++.|.+||..+++.  ...+..
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~--~r~~~~  163 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPI----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA--ARVLQG  163 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTT----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE--EEECTT
T ss_pred             EEEECCCCeEEEEEECChhh----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE--EEEecC
Confidence            999999887 3333322110          1123456889999865555444 3   577899999987642  222222


Q ss_pred             CCCce-eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC-cEEEe
Q psy17188        345 SAPAC-YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIW  422 (504)
Q Consensus       345 ~~~~i-~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~i~iw  422 (504)
                      |.... ....+.+++.  .+.+...++.+..|.                   ..+..++|+|||+.|+++..++ .++.+
T Consensus       164 ~~~~~~~~~~~~~~g~--~~~~~~~~g~~~~~~-------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~  222 (343)
T 2qe8_A          164 YPGIAPEDIDLVIDGV--PVQIGQPDGTVIRPH-------------------LGVNGIVLDAENEWLYLSPMHSTSMYRI  222 (343)
T ss_dssp             CTTTSCCSCCCEETTE--ECBEECTTSCEECCC-------------------CCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred             CCcccccccceeECCE--EEEeccCCCceecee-------------------cccceeEeccCCCEEEEEeCCCCeEEEE
Confidence            11100 0122333443  333444455554432                   1256899999999998887766 44444


Q ss_pred             eCC---CCCcc-----eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee-cCCceEEEEEccCC
Q psy17188        423 DLA---SPTPR-----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISADG  493 (504)
Q Consensus       423 d~~---~~~~~-----~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~d~  493 (504)
                      +..   .+...     ......++......++++++|+++++...++.|.+||.++++....... +...+.+++|.+++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g  302 (343)
T 2qe8_A          223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG  302 (343)
T ss_dssp             EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred             EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence            421   11100     0001111222345679999999999988899999999866764333322 23468999999999


Q ss_pred             CEEEEecC
Q psy17188        494 TKLWTGGL  501 (504)
Q Consensus       494 ~~l~s~s~  501 (504)
                      +++++.+.
T Consensus       303 ~l~v~~~~  310 (343)
T 2qe8_A          303 YLYFDCNQ  310 (343)
T ss_dssp             CEEEEECC
T ss_pred             cEEEEeCc
Confidence            88887664

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.50  E-value=4.4e-11  Score=108.82  Aligned_cols=225  Identities=14%  Similarity=0.160  Sum_probs=149.6

Q ss_pred             CeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc
Q psy17188        247 GASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  325 (504)
Q Consensus       247 ~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  325 (504)
                      ...+..|+|++ .++++...++.|..||..+++...+.                 ....+.+++++++|+++++. .+ .
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-----------------~~~~v~~i~~~~dg~l~v~~-~~-g  110 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-----------------LPFMGSALAKISDSKQLIAS-DD-G  110 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-----------------CSSCEEEEEEEETTEEEEEE-TT-E
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------------CCCcceEEEEeCCCeEEEEE-CC-C
Confidence            34678899974 45666677889999999988754321                 13468899999999876654 44 4


Q ss_pred             EEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccC------CCeEEEEecCCCCCCCcccccccccCCCc
Q psy17188        326 LSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQRDNY  397 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~  397 (504)
                      |.+||..+++.........  ....+..++++|+++  ++++...      .+.|..++  .+ ..   ...  ......
T Consensus       111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~v~~~~~~~~~~~~~l~~~~--~g-~~---~~~--~~~~~~  180 (326)
T 2ghs_A          111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA--LWIGTMGRKAETGAGSIYHVA--KG-KV---TKL--FADISI  180 (326)
T ss_dssp             EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC--EEEEEEETTCCTTCEEEEEEE--TT-EE---EEE--EEEESS
T ss_pred             EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC--EEEEeCCCcCCCCceEEEEEe--CC-cE---EEe--eCCCcc
Confidence            9999987765332222111  123578899999997  4444322      24455555  21 11   111  112234


Q ss_pred             eEEEEEcCCCCEEEEe-eCCCcEEEeeCC--CC-Ccc---eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        398 IRSVKLLPDGRTLIVG-GEASNLSIWDLA--SP-TPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~-~~dg~i~iwd~~--~~-~~~---~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ...++|+||++.|+.+ +.++.|.+|++.  ++ ...   ....+.........++++++|+++++...++.|.+|+. +
T Consensus       181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~  259 (326)
T 2ghs_A          181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D  259 (326)
T ss_dssp             EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred             cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence            5689999999877655 456889999986  44 211   11222223345678999999998887777788999998 6


Q ss_pred             cceEEEEeecCCceEEEEEc-cCCCEEEEecC
Q psy17188        471 QTLVRQFQGHTDGASCIDIS-ADGTKLWTGGL  501 (504)
Q Consensus       471 ~~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s~  501 (504)
                      ++.+..+..+...+++++|+ +|++.|+.++.
T Consensus       260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             CCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            77778887777789999998 88887765543

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.49  E-value=9.5e-10  Score=112.98  Aligned_cols=357  Identities=9%  Similarity=0.064  Sum_probs=221.8

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  195 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  195 (504)
                      |.++...+++++.+...++.|..|+.+++..    ...........|.++...+++.+.+. +.++-|.+||..+.+...
T Consensus       175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~----~~~~~~~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~  249 (795)
T 4a2l_A          175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTF----EKVIPILGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKN  249 (795)
T ss_dssp             CEEEEEEETTEEEEEESSSCEEEEETTTCCE----EECC----CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEE
T ss_pred             eEEEEECCCCCEEEEECCCCEEEEeCCCCeE----EEecCCCCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEE
Confidence            8889888889888766555688899765421    11111123567899988888775554 444458899987644221


Q ss_pred             eeee-----ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEE
Q psy17188        196 KAEL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       196 ~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ....     .-....|.++...++|.+.+ |+.+ -|.+||..+++.......       ....|.++...++|. |..|
T Consensus       250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWig  326 (795)
T 4a2l_A          250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLG  326 (795)
T ss_dssp             ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEE
T ss_pred             eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEE
Confidence            1100     01235699999988887554 4455 589999888765443221       235799999998885 5667


Q ss_pred             cCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       264 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.++-|..++..++....+.....         ........|.++...++|+ |.+|+.++-|..|+..+..........
T Consensus       327 t~~~Gl~~~~~~~~~~~~~~~~~~---------~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~  396 (795)
T 4a2l_A          327 TYFGGLNYYHPIRNRFKNIRNIPY---------KNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQE  396 (795)
T ss_dssp             ESSSCEEEECGGGGSSEEECCCTT---------SSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC-
T ss_pred             ECCCCeEEeCCCcccceEEcCCCC---------CCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCC
Confidence            777788999887765443321110         0011245689999998887 566777777999998765322211110


Q ss_pred             ------cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        344 ------SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       344 ------~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                            .....|.++...+++.  ++..+..++-+..||..++.... ............|.++...++|.+.+.. . +
T Consensus       397 ~~~~~~l~~~~v~~i~~d~~g~--~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~  471 (795)
T 4a2l_A          397 DESARGIGSNNIKAVYVDEKKS--LVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-L-S  471 (795)
T ss_dssp             -----CCSCSCEEEEEEETTTT--EEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-S
T ss_pred             CCcccCCCCccEEEEEEcCCCC--EEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-c-C
Confidence                  1234677888777764  35566666778999876542111 1100001234578899999988755544 4 4


Q ss_pred             cEEEeeCCCCCcceeecc----cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-------ecCCceEE
Q psy17188        418 NLSIWDLASPTPRIKAEL----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASC  486 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~----~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~  486 (504)
                      .+.+||..+++.......    .-....|.++...+++++.+... + -+..||..+++.  .+.       .....|.+
T Consensus       472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~  547 (795)
T 4a2l_A          472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNC  547 (795)
T ss_dssp             CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEE
T ss_pred             ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEE
Confidence            589999876543222111    11235688999999998776554 4 488999877765  332       12346899


Q ss_pred             EEEccCCCEEEEe
Q psy17188        487 IDISADGTKLWTG  499 (504)
Q Consensus       487 ~~~s~d~~~l~s~  499 (504)
                      +...++|+..++.
T Consensus       548 i~~d~~g~lWigT  560 (795)
T 4a2l_A          548 IYEASNGIIWVGT  560 (795)
T ss_dssp             EEECTTSCEEEEE
T ss_pred             EEECCCCCEEEEe
Confidence            9998888865543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.49  E-value=1.4e-11  Score=111.12  Aligned_cols=235  Identities=11%  Similarity=0.111  Sum_probs=152.7

Q ss_pred             EEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        238 VRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      +..+........+..|+|+++ ++++...++.|..|+. +++...+                ......+..++++++|++
T Consensus        37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~----------------~~~~~~~~gl~~d~dG~l   99 (305)
T 3dr2_A           37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVL----------------LDATAFTNGNAVDAQQRL   99 (305)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEE----------------EESCSCEEEEEECTTSCE
T ss_pred             eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEE----------------eCCCCccceeeECCCCCE
Confidence            333444556678899999998 6677778899999998 4544322                123455889999999997


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeee-cc-CCCceeeEEECCCCCCceeee----ccC-------------CCeEEEEec
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAEL-TS-SAPACYALAISPDSKSPFFSS----HHY-------------KSCVKVWDI  377 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~~~~~~----~~~-------------~~~i~i~d~  377 (504)
                      +++...++.|.+|+.. ++....... .. ....+..+++.+++.  ++++    +..             .+.|..+|.
T Consensus       100 ~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~  176 (305)
T 3dr2_A          100 VHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP  176 (305)
T ss_dssp             EEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred             EEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence            7666666789999975 332211111 11 123467899999997  5554    221             245666665


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC------CcEEEeeCCCCCcceeec-ccCCCCceeEEEECCC
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRIKAE-LTSSAPACYALAISPD  450 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d------g~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~  450 (504)
                      ..+.... +   .   .......++|+||++.|+++...      +.|++|++.......... ..........++++++
T Consensus       177 ~~g~~~~-~---~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~  249 (305)
T 3dr2_A          177 DGSPLQR-M---A---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG  249 (305)
T ss_dssp             SSCCCEE-E---E---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT
T ss_pred             CCCcEEE-E---e---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC
Confidence            4432211 1   1   12345689999999988877665      689999987543110001 1112233456799999


Q ss_pred             CCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCC
Q psy17188        451 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       451 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      |++.++. .+| |.+|+. +++.+..+..+. .+.+++|+++++.|+.++.++
T Consensus       250 G~lwv~~-~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          250 GWLWSSS-GTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             SCEEECC-SSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred             CCEEEec-CCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence            9955544 554 999997 577777777554 589999999999888877653

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.49  E-value=1.6e-11  Score=114.44  Aligned_cols=303  Identities=9%  Similarity=0.066  Sum_probs=181.5

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecC-------cCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSS-------APACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-------~~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      ++..+++++.++.|..+|.++++..........       ...+. .+..  ++..+++++.++.|..+|.++++.+...
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence            356777788889999999988876544443221       12222 2222  4557888889999999999999988777


Q ss_pred             cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      .............  +..++.++.++.|..+|..+|+. +|........     ......    ......  +..++++.
T Consensus       130 ~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~-----~~~~~~----~~~~~~--~~~v~~g~  195 (376)
T 3q7m_A          130 KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPS-----LSLRGE----SAPTTA--FGAAVVGG  195 (376)
T ss_dssp             ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEECCC----------CCC----CCCEEE--TTEEEECC
T ss_pred             eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCc-----eeecCC----CCcEEE--CCEEEEEc
Confidence            6443222222222  44788888999999999999874 3443322110     000000    111111  45678888


Q ss_pred             CCCcEEEEeCCCCCccceeeeccCCCc-----eeeEEECC--CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        322 EASNLSIWDLASPTPRIKAELTSSAPA-----CYALAISP--DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       322 ~dg~i~v~d~~~~~~~~~~~~~~~~~~-----i~~~~~~~--~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      .++.+..+|..+++.............     +..+...|  .+.  .+..++.++.+..+|..+++......       
T Consensus       196 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~v~~~~~~g~l~~~d~~tG~~~w~~~-------  266 (376)
T 3q7m_A          196 DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG--VVFALAYNGNLTALDLRSGQIMWKRE-------  266 (376)
T ss_dssp             TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT--EEEEECTTSCEEEEETTTCCEEEEEC-------
T ss_pred             CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC--EEEEEecCcEEEEEECCCCcEEeecc-------
Confidence            899999999988865544433221100     00000111  122  45566678899999987654221111       


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                      ......+..  ++..|++++.++.|..+|..+++.+........ ..+.....  .+..|+.++.+|.++++|..+++.+
T Consensus       267 ~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~  341 (376)
T 3q7m_A          267 LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV  341 (376)
T ss_dssp             CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence            112233333  466788888899999999999886655442111 11222222  3567888889999999999999998


Q ss_pred             EEEeecCCceEE-EEEccCCCEEEEecCCCC
Q psy17188        475 RQFQGHTDGASC-IDISADGTKLWTGGLDNT  504 (504)
Q Consensus       475 ~~~~~h~~~v~~-~~~s~d~~~l~s~s~Dgt  504 (504)
                      .........+.. ...  .+..|+.++.||+
T Consensus       342 ~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~  370 (376)
T 3q7m_A          342 AQQKVDSSGFQTEPVA--ADGKLLIQAKDGT  370 (376)
T ss_dssp             EEEECCTTCBCSCCEE--ETTEEEEEBTTSC
T ss_pred             EEEecCCCcceeCCEE--ECCEEEEEeCCCE
Confidence            877753333332 222  2456777887764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.48  E-value=1.5e-11  Score=111.00  Aligned_cols=242  Identities=12%  Similarity=0.029  Sum_probs=153.5

Q ss_pred             eecCcCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        199 LTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       199 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      +...........|+++++ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.. +
T Consensus        40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g  116 (305)
T 3dr2_A           40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G  116 (305)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence            334445567899999998 5666667889999998 454 34455566778999999999877766667899999986 5


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCCCcccee
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV----GGE-------------ASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~v~d~~~~~~~~~~  340 (504)
                      +...+...           ........+..++++++|++.++    +..             .+.|..+|..+++.....
T Consensus       117 ~~~~~~~~-----------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~  185 (305)
T 3dr2_A          117 QAHLLVGR-----------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA  185 (305)
T ss_dssp             CEEEEECE-----------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred             CEEEEEec-----------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence            54322100           00111234678999999997776    322             245777777655433222


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccC----CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHY----KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  416 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d  416 (504)
                          .......++|+|+++.++++....    .+.|.+|++.... ......+. .........++++++|+ |.+++.+
T Consensus       186 ----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~-~~~~~~pdgi~~d~~G~-lwv~~~~  258 (305)
T 3dr2_A          186 ----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFA-SVPDGLPDGFCVDRGGW-LWSSSGT  258 (305)
T ss_dssp             ----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEE-CCSSSCCCSEEECTTSC-EEECCSS
T ss_pred             ----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEE-ECCCCCCCeEEECCCCC-EEEecCC
Confidence                223567899999998533332221    3789999987542 11001110 11233445789999999 4444444


Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                       .|.+|+.. ++.........   .+..++|+++++.|..++.++ +..++
T Consensus       259 -gv~~~~~~-g~~~~~~~~~~---~~~~~~f~~d~~~L~it~~~~-l~~~~  303 (305)
T 3dr2_A          259 -GVCVFDSD-GQLLGHIPTPG---TASNCTFDQAQQRLFITGGPC-LWMLP  303 (305)
T ss_dssp             -EEEEECTT-SCEEEEEECSS---CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred             -cEEEECCC-CCEEEEEECCC---ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence             49999984 44443433332   478889999999888887765 43333

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.48  E-value=4.7e-12  Score=127.70  Aligned_cols=244  Identities=9%  Similarity=0.120  Sum_probs=154.7

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC---
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS---  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---  181 (504)
                      +|...+..++|||||++||.+.      +..|++||+++++..   .. ..  +......++|+ |++.|+.+..+.   
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~---~~-~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~  198 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL---ET-PL--KDVKFSGISWL-GNEGFFYSSYDKPDG  198 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE---EE-EE--EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC---cc-cc--CCceeccEEEe-CCCEEEEEEecCccc
Confidence            3566889999999999998532      257999999986421   11 11  11113577899 999999988774   


Q ss_pred             ----------cEEEEeCCCCCcccee--eeec-CcCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCe-EEEeecC
Q psy17188        182 ----------NLSIWDLASPTPRIKA--ELTS-SAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQT-LVRQFQG  243 (504)
Q Consensus       182 ----------~i~iw~~~~~~~~~~~--~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~  243 (504)
                                .|++|++.+.......  .... |......+.|+||+++|+....    +..|+++|+.++. ....+..
T Consensus       199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~  278 (693)
T 3iuj_A          199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG  278 (693)
T ss_dssp             ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred             ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence                      3999999876543222  2233 3445788999999998765442    3479999998763 3445555


Q ss_pred             CCCCeEEEEEccCCCEEEEEc-CC---CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE
Q psy17188        244 HTDGASCIDISADGTKLWTGG-LD---NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  319 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~-~d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  319 (504)
                      +....... +++++..|+..+ .+   +.|..+|+.++....|             .....+...+.  .|+++++.|+.
T Consensus       279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~-------------~~l~~~~~~~~--~~s~~g~~lv~  342 (693)
T 3iuj_A          279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW-------------RDLIPERQQVL--TVHSGSGYLFA  342 (693)
T ss_dssp             SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-------------EEEECCCSSCE--EEEEETTEEEE
T ss_pred             CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-------------EEEecCCCCEE--EEEEECCEEEE
Confidence            66666555 666666555443 33   5788899887642101             11122333333  88898988877


Q ss_pred             EeCCC---cEEEEeCCCCCccceeeec-cCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCC
Q psy17188        320 GGEAS---NLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQP  380 (504)
Q Consensus       320 ~~~dg---~i~v~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~  380 (504)
                      ...++   .|++|++....   ...+. .....+..+.++++++.+++...+  .-+.+..||+..+
T Consensus       343 ~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g  406 (693)
T 3iuj_A          343 EYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG  406 (693)
T ss_dssp             EEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred             EEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence            65544   68899887542   12222 233456677778888865544433  2377888887654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.48  E-value=1.3e-12  Score=119.12  Aligned_cols=284  Identities=11%  Similarity=0.061  Sum_probs=171.2

Q ss_pred             eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------CCCcEEEEeCCCCCccceeeeecC--
Q psy17188        135 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPTPRIKAELTSS--  202 (504)
Q Consensus       135 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~--  202 (504)
                      +|.++|.++.+.   +..+.. +. .+  .+.++||+++++++.          .++.|.+||+.+.+......+.+.  
T Consensus        47 ~vsvID~~t~~v---~~~i~v-G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~  119 (368)
T 1mda_H           47 ENWVSCAGCGVT---LGHSLG-AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR  119 (368)
T ss_dssp             EEEEEETTTTEE---EEEEEE-CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred             eEEEEECCCCeE---EEEEeC-CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence            888999988533   333332 22 33  799999999999886          367899999998775433333210  


Q ss_pred             ---cCceEEEEECCCCCEEEEEeC--CCcEEE--EECCCCeEEEeecCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEEC
Q psy17188        203 ---APACYALAISPDSKVCFSCCS--DGNIAV--WDLHNQTLVRQFQGHTDGASCIDISADG-TKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       203 ---~~~v~~~~~s~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~  274 (504)
                         ......++++|||++++++..  +..|.+  +|+.+   +..+.. .+.   ..+.|++ ..+++.+.|+.+.+.|+
T Consensus       120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~  192 (368)
T 1mda_H          120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDL  192 (368)
T ss_dssp             CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred             cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence               022456899999999998874  356888  88877   444432 111   1233444 35566778888888898


Q ss_pred             CC-----CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        275 RE-----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       275 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      .+     +++.. ..      .  .....  ...+.   . .+++..++..+. +.+.+.|...........        
T Consensus       193 ~~~~~~~~~v~~-~~------t--~~i~v--g~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~--------  248 (368)
T 1mda_H          193 AAAPAAAGIVGA-QC------T--GAQNC--SSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAA--------  248 (368)
T ss_dssp             CSSCCCCEECCC-CS------C--TTSCB--CSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECC--------
T ss_pred             ccccccCCeEEE-Ee------e--eeeeC--CCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEE--------
Confidence            86     33210 00      0  01111  11222   3 555666666556 888888876432111110        


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-C--------CcEE
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A--------SNLS  420 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-d--------g~i~  420 (504)
                                               |++....    .....  ........++++||+++++++.. +        +.+.
T Consensus       249 -------------------------~~~~~~~----~~~~~--~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~  297 (368)
T 1mda_H          249 -------------------------IDGNESG----RKADN--FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS  297 (368)
T ss_dssp             -------------------------CCSSCTH----HHHTT--EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred             -------------------------EEecccc----ccccc--cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence                                     1110000    00000  00011113679999998887643 2        3567


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCE-EEEee-CCCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~-l~s~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      ++|+.+.+.+.......   ....++|+||+++ +++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus       298 ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          298 SVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN  366 (368)
T ss_dssp             EEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred             EEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence            99999887665554443   4678899999984 55555 589999999999999999885443 45565544

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.47  E-value=1.1e-12  Score=120.00  Aligned_cols=171  Identities=10%  Similarity=0.056  Sum_probs=130.3

Q ss_pred             ceEEEEEccCCCEEEEecCCCcEEEEeCCCCC---------ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEE
Q psy17188        161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPT---------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  231 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd  231 (504)
                      .++.+++++...++++|+.+ .+.+|++++..         ..... ...+.. |+.++|  |+++|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            68899999999999999887 56669875332         11112 223555 999999  88999998 889999999


Q ss_pred             CCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       232 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                      +.+.........|...+.++.+.+.  .+++++.||.|.+||+.++...                   .....|++++|+
T Consensus       113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-------------------~~~~~Vs~v~WS  171 (388)
T 1xip_A          113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-------------------QLAQNVTSFDVT  171 (388)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-------------------EEEESEEEEEEC
T ss_pred             chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-------------------cccCCceEEEEc
Confidence            9877665666667888888887754  3888999999999999987632                   123569999999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCccceeee------c---cCCCceeeEEECCCCCC
Q psy17188        312 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL------T---SSAPACYALAISPDSKS  360 (504)
Q Consensus       312 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~------~---~~~~~i~~~~~~~~~~~  360 (504)
                      |+|  ++++..||++++|+...........+      .   .+...+.++.|.+++..
T Consensus       172 pkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f  227 (388)
T 1xip_A          172 NSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF  227 (388)
T ss_dssp             SSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred             CCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence            999  77899999999998876542112222      2   35678999999998873

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.47  E-value=4.3e-12  Score=115.77  Aligned_cols=244  Identities=9%  Similarity=-0.018  Sum_probs=155.2

Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------CCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      .|.++|..+++.+.++.....+  .+.++||+++++++.          .++.|.+||+.+++...             .
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~-------------~  111 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA-------------D  111 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE-------------E
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE-------------E
Confidence            7889999999999999765555  799999999888875          46899999999988532             1


Q ss_pred             ceec-----ccCCceEEEEEcCCCCEEEEEeC--CCcEEE--EeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        296 LDCL-----QRDNYIRSVKLLPDGRTLIVGGE--ASNLSI--WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       296 ~~~~-----~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v--~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                      +...     ........++++|||++++++..  +..+.+  +|..+     ...+....    +..+.|+++. .+++.
T Consensus       112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~~----~~~~~p~g~~-~~~~~  181 (368)
T 1mda_H          112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSAS----CFHIHPGAAA-THYLG  181 (368)
T ss_dssp             EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECSS----CCCCEEEETT-EEECC
T ss_pred             EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECCC----ceEEccCCCe-EEEEE
Confidence            1111     00123567999999999999875  456888  88876     11221111    1224466665 45566


Q ss_pred             cCCCeEEEEecCC----CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-----
Q psy17188        367 HYKSCVKVWDISQ----PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-----  437 (504)
Q Consensus       367 ~~~~~i~i~d~~~----~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----  437 (504)
                      +.|+.+.+.|+..    .............-...+.   + ++++..++..+. +.+.+.|..+..........-     
T Consensus       182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~  256 (368)
T 1mda_H          182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR  256 (368)
T ss_dssp             CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred             cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence            6788888888765    1111100000000112222   3 666666666666 999999987543222111110     


Q ss_pred             -----CCCceeEEEECCCCCEEEEeeC-C--------CcEEEEEcCCcceEEEEeecCCceEEEEEccCCCE-EEEec
Q psy17188        438 -----SAPACYALAISPDSKVCFSCCS-D--------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWTGG  500 (504)
Q Consensus       438 -----~~~~v~~l~~s~~~~~l~s~~~-d--------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~-l~s~s  500 (504)
                           .......++++||++.++.+.. +        +.+.++|+.+++.+.++.... ....++|+|||++ +++..
T Consensus       257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~  333 (368)
T 1mda_H          257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANS  333 (368)
T ss_dssp             HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEE
T ss_pred             cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEcc
Confidence                 0011112589999998887643 2        356799999999999887544 6889999999985 44444

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.47  E-value=4.8e-12  Score=116.20  Aligned_cols=274  Identities=11%  Similarity=0.069  Sum_probs=164.4

Q ss_pred             CceEEEEEccCCCEEEEec--CCCcEEEEeCCCCCccce----eeeecCcCceEEEEECCCCCEEEEEeC-----CCcEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIK----AELTSSAPACYALAISPDSKVCFSCCS-----DGNIA  228 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~  228 (504)
                      .....++++++|+.+++..  .++.++||.+.+++....    .....+...+..++++++++++++-..     +..|.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~   96 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV   96 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence            6789999999999888853  234355555543321100    011234567899999999876665433     57899


Q ss_pred             EEECCCCeEEEeecCC------CCCeEEEEEccCCCEE-EEEc---CCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        229 VWDLHNQTLVRQFQGH------TDGASCIDISADGTKL-WTGG---LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l-~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      +||+.+++.+..+...      ...+..+++++++..+ ++-.   .++.|.+||+.+++.....  .            
T Consensus        97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~--~------------  162 (343)
T 2qe8_A           97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL--Q------------  162 (343)
T ss_dssp             EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC--T------------
T ss_pred             EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe--c------------
Confidence            9999999877766432      2456899999865444 5544   5789999999888643211  0            


Q ss_pred             cccCCc-eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        299 LQRDNY-IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       299 ~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                       .+... .....+.++|..+.+...++.+..|.                ..+..++++|+++. ++++......+..++.
T Consensus       163 -~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~  224 (343)
T 2qe8_A          163 -GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEW-LYLSPMHSTSMYRIKS  224 (343)
T ss_dssp             -TCTTTSCCSCCCEETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCE-EEEEESSCSEEEEEEH
T ss_pred             -CCCcccccccceeECCEEEEeccCCCceecee----------------cccceeEeccCCCE-EEEEeCCCCeEEEEEH
Confidence             00000 00022333566666666666665543                14567899998874 2333333345555543


Q ss_pred             CCCC--CCCc---ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC
Q psy17188        378 SQPG--SKTP---VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  452 (504)
Q Consensus       378 ~~~~--~~~~---~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~  452 (504)
                      ....  ....   ...+....+......++++++|.++++...++.|.+||..+++........ .......++|.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~  303 (343)
T 2qe8_A          225 ADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGY  303 (343)
T ss_dssp             HHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTSC
T ss_pred             HHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCCc
Confidence            2100  0000   000111112234557999999999888888999999998545432222211 244578999999999


Q ss_pred             EEEEeeCCCcEEEE
Q psy17188        453 VCFSCCSDGNIAVW  466 (504)
Q Consensus       453 ~l~s~~~dg~i~iw  466 (504)
                      ++++.+..+.+.+|
T Consensus       304 l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          304 LYFDCNQLHHSAPL  317 (343)
T ss_dssp             EEEEECCGGGSGGG
T ss_pred             EEEEeCcccccccc
Confidence            88887765544433

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.46  E-value=7.7e-12  Score=126.12  Aligned_cols=246  Identities=17%  Similarity=0.136  Sum_probs=155.6

Q ss_pred             CCCceEEEEEccCCCEEEEe-----cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc------
Q psy17188        158 RDNYIRSVKLLPDGRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN------  226 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~------  226 (504)
                      +...+..++|||||++||.+     +....|++||+.+++.... .+...  ....++|+ |++.|+.++.+..      
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~  202 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELS  202 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCccccccc
Confidence            45578899999999999864     3335799999998764221 12111  12467899 9999998887743      


Q ss_pred             -------EEEEECCCCe----EEEeecC-CCCCeEEEEEccCCCEEEEEc----CCCeEEEEECCCCceEEEeecCCCCC
Q psy17188        227 -------IAVWDLHNQT----LVRQFQG-HTDGASCIDISADGTKLWTGG----LDNTVRSWDLREGCVKVWDISQPGSK  290 (504)
Q Consensus       227 -------i~iwd~~~~~----~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~dg~i~~wd~~~~~~~~~~~~~~~~~  290 (504)
                             |++|++.++.    ++..... |......+.|+|||++|+...    .+..|+++|+.++...          
T Consensus       203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~----------  272 (693)
T 3iuj_A          203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP----------  272 (693)
T ss_dssp             --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC----------
T ss_pred             ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc----------
Confidence                   9999998753    4444444 555678899999999875433    2358999998776311          


Q ss_pred             CCcccceecccCCceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        291 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       291 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                          ......+....... ++++|..|+..+.    .+.|..+|+.++.......+..+...+.  .++++++. ++++.
T Consensus       273 ----~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~-lv~~~  344 (693)
T 3iuj_A          273 ----LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGY-LFAEY  344 (693)
T ss_dssp             ----CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTE-EEEEE
T ss_pred             ----eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCE-EEEEE
Confidence                11112222333333 6666666655443    2579999998765422233444444444  88888875 34444


Q ss_pred             cCCC--eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC----CcEEEeeCCCCCcc
Q psy17188        367 HYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----SNLSIWDLASPTPR  430 (504)
Q Consensus       367 ~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d----g~i~iwd~~~~~~~  430 (504)
                      ..++  .|++|++....    ...+. ......+..+.++++++.|+....+    +.|+.||+.+++..
T Consensus       345 ~~~g~~~l~~~d~~g~~----~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~  409 (693)
T 3iuj_A          345 MVDATARVEQFDYEGKR----VREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS  409 (693)
T ss_dssp             EETTEEEEEEECTTSCE----EEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred             EECCeeEEEEEECCCCe----eEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence            4444  67888876321    11111 1234457777888888877766544    78999999876543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.46  E-value=1.7e-10  Score=105.48  Aligned_cols=231  Identities=18%  Similarity=0.178  Sum_probs=148.6

Q ss_pred             cCCCEEEEe-cCCCcEEEEeCCCC--Cccceeeee-------cCcCceEEEEECCCCCEEEEEeCC------CcEEEEEC
Q psy17188        169 PDGRTLIVG-GEASNLSIWDLASP--TPRIKAELT-------SSAPACYALAISPDSKVCFSCCSD------GNIAVWDL  232 (504)
Q Consensus       169 ~~~~~l~~~-~~dg~i~iw~~~~~--~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~  232 (504)
                      ++.++|++. ..++.|.++|+.+.  +++....+.       .....-..+..+|+| +++++..+      +.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            778887765 56788999999744  222333331       011134557788999 77766655      78999999


Q ss_pred             CCCeEEEeecCCCC---CeEEEEEccCCCEEEEEc-------------------CCCeEEEEECCCCceEEEeecCCCCC
Q psy17188        233 HNQTLVRQFQGHTD---GASCIDISADGTKLWTGG-------------------LDNTVRSWDLREGCVKVWDISQPGSK  290 (504)
Q Consensus       233 ~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~-------------------~dg~i~~wd~~~~~~~~~~~~~~~~~  290 (504)
                      ++++.+.++.....   --..+.|+|+++.+++..                   .+.+|.+||+.++++..         
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~---------  242 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH---------  242 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE---------
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee---------
Confidence            99999998863222   234588899999888884                   46899999999875321         


Q ss_pred             CCcccceecccCCceEEEEE--cCCCCEEEEEeC------CCcEEEEeCCCCCccceeee--cc----------------
Q psy17188        291 TPVSQLDCLQRDNYIRSVKL--LPDGRTLIVGGE------ASNLSIWDLASPTPRIKAEL--TS----------------  344 (504)
Q Consensus       291 ~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~--~~----------------  344 (504)
                          .+...........+.|  +|++++++++++      +++|.+|....++......+  ..                
T Consensus       243 ----tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~  318 (462)
T 2ece_A          243 ----SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA  318 (462)
T ss_dssp             ----EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred             ----EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence                1111111233455655  999999888774      55777665543322111111  00                


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC------------CCceEEEEEcCCCCEEEE
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR------------DNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~------------~~~i~~~~~s~~g~~l~~  412 (504)
                      .......+.+++|++. ++++....+.|.+||+......+.......-..            ......++++|||++|++
T Consensus       319 ~~~~pa~I~lS~DGrf-LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV  397 (462)
T 2ece_A          319 VPPLVTDIDISLDDKF-LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV  397 (462)
T ss_dssp             ECCCCCCEEECTTSCE-EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred             CCCceeEEEECCCCCE-EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence            0235788999999997 556666678999999975433333332222100            113568999999999999


Q ss_pred             ee
Q psy17188        413 GG  414 (504)
Q Consensus       413 ~~  414 (504)
                      +.
T Consensus       398 aN  399 (462)
T 2ece_A          398 TN  399 (462)
T ss_dssp             EC
T ss_pred             Ec
Confidence            86

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.46  E-value=2.5e-10  Score=103.83  Aligned_cols=231  Identities=11%  Similarity=0.024  Sum_probs=147.3

Q ss_pred             eEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEee
Q psy17188        206 CYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       206 v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~  284 (504)
                      ..+..|+|++. ++++...++.|..||.++++.. .+. ....+.++.++++++++++. .+ .|.+||..+++...+..
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE  126 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence            45678999754 5566667889999999887653 333 35679999999999876654 33 59999998887643211


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      ..           .......+..++++|+|+++++...      .+.|..++  +++..   .+.........++|+|++
T Consensus       127 ~~-----------~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~---~~~~~~~~~~~i~~s~dg  190 (326)
T 2ghs_A          127 LE-----------SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT---KLFADISIPNSICFSPDG  190 (326)
T ss_dssp             SS-----------TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE---EEEEEESSEEEEEECTTS
T ss_pred             CC-----------CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE---EeeCCCcccCCeEEcCCC
Confidence            00           0011245789999999997665432      24566666  33211   111222356789999999


Q ss_pred             CCceeeeccCCCeEEEEecC--CCCCCCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecc
Q psy17188        359 KSPFFSSHHYKSCVKVWDIS--QPGSKTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~--~~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      +. ++++...++.|.+||+.  .+........+ ...........++++++|.+.++...++.|.+||.. ++...... 
T Consensus       191 ~~-lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~-  267 (326)
T 2ghs_A          191 TT-GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYE-  267 (326)
T ss_dssp             CE-EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEE-
T ss_pred             CE-EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEE-
Confidence            85 44555667899999986  32011111111 111223456789999999877776667889999984 44333333 


Q ss_pred             cCCCCceeEEEEC-CCCCEEEEeeCC
Q psy17188        436 TSSAPACYALAIS-PDSKVCFSCCSD  460 (504)
Q Consensus       436 ~~~~~~v~~l~~s-~~~~~l~s~~~d  460 (504)
                       .....+++++|+ ++++.|+.++..
T Consensus       268 -~~~~~~~~~af~g~d~~~L~vt~~~  292 (326)
T 2ghs_A          268 -VPGKQTTCPAFIGPDASRLLVTSAR  292 (326)
T ss_dssp             -CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             -CCCCCcEEEEEecCCCCEEEEEecC
Confidence             334568999998 888877655443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.44  E-value=1.6e-10  Score=107.61  Aligned_cols=312  Identities=13%  Similarity=0.090  Sum_probs=176.6

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeec----CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  199 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  199 (504)
                      ++++++...++.|..+|.++++..-........    .....+.+. ...++..+++++.++.|..+|.++++.......
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            344444445888999998876432221110000    001223222 222456788888899999999998876544433


Q ss_pred             ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe-----EEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        200 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-----SCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       200 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      ....  ......  .+..+++++.++.|..+|.++++.+..+.......     ......  +..++.++.++.+..+|.
T Consensus       132 ~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~  205 (376)
T 3q7m_A          132 AGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM  205 (376)
T ss_dssp             SSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred             CCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence            3221  111112  23477888899999999999999888776432211     112222  447888888999999999


Q ss_pred             CCCceEEEeecCCCCCCC--cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        275 REGCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      .+++. .|..........  ...+. .....+    ..  .+..+++++.++.+..+|.++++........    ....+
T Consensus       206 ~tG~~-~w~~~~~~~~~~~~~~~~~-~~~~~p----~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~  273 (376)
T 3q7m_A          206 EQGQM-IWQQRISQATGSTEIDRLS-DVDTTP----VV--VNGVVFALAYNGNLTALDLRSGQIMWKRELG----SVNDF  273 (376)
T ss_dssp             TTCCE-EEEEECCC------------CCCCCC----EE--ETTEEEEECTTSCEEEEETTTCCEEEEECCC----CEEEE
T ss_pred             CCCcE-EEEEecccCCCCccccccc-ccCCCc----EE--ECCEEEEEecCcEEEEEECCCCcEEeeccCC----CCCCc
Confidence            99875 344332211000  00000 000011    11  2467888888999999999887644333221    23333


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      ...  +.  .+..+..++.+..+|..+++........    ....+.....  .+..|++++.+|.|+++|.++++.+..
T Consensus       274 ~~~--~~--~l~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~  343 (376)
T 3q7m_A          274 IVD--GN--RIYLVDQNDRVMALTIDGGVTLWTQSDL----LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQ  343 (376)
T ss_dssp             EEE--TT--EEEEEETTCCEEEEETTTCCEEEEECTT----TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             eEE--CC--EEEEEcCCCeEEEEECCCCcEEEeeccc----CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            332  33  4555667889999998776432111100    0111112222  246788888999999999999887665


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      ....... .......  .+..|+.++.+|.|+.|+
T Consensus       344 ~~~~~~~-~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          344 QKVDSSG-FQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EECCTTC-BCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             EecCCCc-ceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            5542211 1111122  256788888999999887

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.39  E-value=1e-10  Score=106.91  Aligned_cols=233  Identities=10%  Similarity=0.082  Sum_probs=144.2

Q ss_pred             EEC--CCCCEEEEE-eCCCcEEEEECCCC----eEEEeec-------CCCCCeEEEEEccCCCEEEEEcCC------CeE
Q psy17188        210 AIS--PDSKVCFSC-CSDGNIAVWDLHNQ----TLVRQFQ-------GHTDGASCIDISADGTKLWTGGLD------NTV  269 (504)
Q Consensus       210 ~~s--~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~d------g~i  269 (504)
                      .++  +++++|++. ..++.|.++|+.+.    +.++++.       ........+...|+| .++++..+      +.|
T Consensus        88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v  166 (462)
T 2ece_A           88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI  166 (462)
T ss_dssp             TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred             ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence            346  777766654 46788999999765    6777663       112245667889999 77766555      789


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceec-ccCCceEEEEEcCCCCEEEEEe-------------------CCCcEEEE
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLPDGRTLIVGG-------------------EASNLSIW  329 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-------------------~dg~i~v~  329 (504)
                      .++|.++.++.-             ..... .....-..+-|+|+++.+++..                   .+.+|.+|
T Consensus       167 ~vlD~~T~~v~~-------------~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~  233 (462)
T 2ece_A          167 LMLDHYSFEPLG-------------KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW  233 (462)
T ss_dssp             EEECTTTCCEEE-------------ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred             EEEECCCCeEEE-------------EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence            999999887532             11101 1112234678899999888874                   36789999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEE--CCCCCCceeeecc-----CCCeEEEEecCCCCCCCccccc--cc---------
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAI--SPDSKSPFFSSHH-----YKSCVKVWDISQPGSKTPVSQL--DC---------  391 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~-----~~~~i~i~d~~~~~~~~~~~~~--~~---------  391 (504)
                      |+.+.+......+.........+.|  +|+++. .+++..     .+++|.+|..+.+ ........  ..         
T Consensus       234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~-aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~  311 (462)
T 2ece_A          234 DLRKRKRIHSLTLGEENRMALELRPLHDPTKLM-GFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPE  311 (462)
T ss_dssp             ETTTTEEEEEEESCTTEEEEEEEEECSSTTCCE-EEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCG
T ss_pred             ECCCCcEeeEEecCCCCCccceeEeeECCCCCE-EEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCccccccccc
Confidence            9997643333333212234455555  999986 444444     6777876655431 10000000  00         


Q ss_pred             -----ccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCCC-CcceeecccCC-----------C---CceeEEEECCC
Q psy17188        392 -----LQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASP-TPRIKAELTSS-----------A---PACYALAISPD  450 (504)
Q Consensus       392 -----~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~-~~~~~~~~~~~-----------~---~~v~~l~~s~~  450 (504)
                           .........+.+|+||++|+++.. .+.|.+||+... +..........           .   ..-..++++||
T Consensus       312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD  391 (462)
T 2ece_A          312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD  391 (462)
T ss_dssp             GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT
T ss_pred             cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC
Confidence                 000245678999999999998876 578999998633 22222222111           0   12466799999


Q ss_pred             CCEEEEee
Q psy17188        451 SKVCFSCC  458 (504)
Q Consensus       451 ~~~l~s~~  458 (504)
                      |++|+++.
T Consensus       392 Gk~LyVaN  399 (462)
T 2ece_A          392 GRRVYVTN  399 (462)
T ss_dssp             SSEEEEEC
T ss_pred             CCEEEEEc
Confidence            99999887

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.36  E-value=3.2e-08  Score=101.42  Aligned_cols=407  Identities=11%  Similarity=0.044  Sum_probs=232.1

Q ss_pred             CcceEEEECCCCC-cccCCCCCCcccCCCCCccccceeeec---------CCCcEEEEEEcC--CCcEEEEecCCeEEEE
Q psy17188         72 KPAYSYHVTTDGQ-MQPVPFPPDALIGPGIPRHARQINTLS---------HGEVVCAVTISN--PTKYVYTGGKGCVKVW  139 (504)
Q Consensus        72 ~~v~~~~~s~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~V~~v~~s~--~~~~l~~~~d~~i~vw  139 (504)
                      ..|.++...++|. +- ++...+.+..++....  ....+.         ....|.++....  ++.+.+...++.|..|
T Consensus        66 n~I~~i~~d~~g~~lW-igt~~~Gl~~~d~~~~--~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~  142 (781)
T 3v9f_A           66 NELNEVYTDPVQPVIW-IATQRAGLNAYNYETQ--SFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYL  142 (781)
T ss_dssp             SCEEEEEECSSSSEEE-EEESSSCEEEEETTTT--EEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEE
T ss_pred             cccceEEEcCCCCEEE-EEeCCCCcceECCCCC--eEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEE
Confidence            4577887777776 43 3444434554443211  111111         124689999888  8887776546668889


Q ss_pred             eCCCCCCCCceeeeeec----CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee-----ecCcCceEEEE
Q psy17188        140 DISQPGSKTPVSQLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----TSSAPACYALA  210 (504)
Q Consensus       140 ~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~~~v~~~~  210 (504)
                      |.+++.    +..+...    -....|.++...+++.+.+ ++.++-|..||..+.+.......     ......|.++.
T Consensus       143 ~~~~~~----~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~  217 (781)
T 3v9f_A          143 DIATGK----FTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIY  217 (781)
T ss_dssp             ETTTTE----EEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEE
T ss_pred             ECCCCe----EEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEE
Confidence            876531    1111110    1134688888877776554 55555688899776542211100     01134588998


Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-------CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        211 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       211 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      ..+++.+.+ ++.+ -+.+||..+++.......       ....|.++...++|. |..|+..+-|.++|..++....+.
T Consensus       218 ~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~  294 (781)
T 3v9f_A          218 KDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPE  294 (781)
T ss_dssp             ECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC------
T ss_pred             EcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeee
Confidence            888887555 4445 599999887765432211       245689998888774 556666566888998877643221


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee-------eccCCCceeeEEECC
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-------LTSSAPACYALAISP  356 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-------~~~~~~~i~~~~~~~  356 (504)
                      ...-..... ...........|.++...++|. |.+|+.++-|..++...........       .......|.++...+
T Consensus       295 ~~~f~~~~~-~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~  372 (781)
T 3v9f_A          295 QIRFEFIRE-GDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG  372 (781)
T ss_dssp             ---CEEECB-CSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT
T ss_pred             ccccccccC-CCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC
Confidence            100000000 0000112345689999999887 6667767778888877553222211       111234688888877


Q ss_pred             CCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      ++.   +..+..++-+..||........ .. .........|.++...++|.+. +|+.++.|..++..+++........
T Consensus       373 ~g~---lWigt~~~Gl~~~~~~~~~~~~-~~-~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~  446 (781)
T 3v9f_A          373 QGK---LWIGTDGGGINVFENGKRVAIY-NK-ENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIELEK  446 (781)
T ss_dssp             TSC---EEEEEBSSCEEEEETTEEEEEC-C------CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECCSTT
T ss_pred             CCC---EEEEeCCCcEEEEECCCCeEEE-cc-CCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEeccCC
Confidence            765   4455555668888865421110 00 0001234668899998888754 4666667999988765432221111


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeec-----CCceEEEEEccCCCEEEEe
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-----TDGASCIDISADGTKLWTG  499 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~~~~s~d~~~l~s~  499 (504)
                      .....|.++...+++++.+. +. +-|.+||..+++........     ...|.++...++|+..+..
T Consensus       447 ~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt  512 (781)
T 3v9f_A          447 NELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT  512 (781)
T ss_dssp             TCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred             CCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE
Confidence            23456888888888875554 44 45899998877654332212     3568999998888765543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.35  E-value=1.9e-10  Score=114.96  Aligned_cols=272  Identities=10%  Similarity=0.093  Sum_probs=164.4

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeee-cCc--CceEE-EEECCCCCEEEEEeC------CCcEEEEECCCCeEEE
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSA--PACYA-LAISPDSKVCFSCCS------DGNIAVWDLHNQTLVR  239 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~--~~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~  239 (504)
                      ++..|++++.|+.|..+|..+++........ ...  ..+.. ...  .+..+++++.      ++.|+.+|.++|+.+.
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W  204 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW  204 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence            4667888888999999999988765444332 100  11111 111  2335555543      6899999999999988


Q ss_pred             eecCCCCC--------------------------------eEEEEEccCCCEEEEEcCCC-------------------e
Q psy17188        240 QFQGHTDG--------------------------------ASCIDISADGTKLWTGGLDN-------------------T  268 (504)
Q Consensus       240 ~~~~h~~~--------------------------------v~~~~~~~~~~~l~s~~~dg-------------------~  268 (504)
                      .+......                                ...++++|++.+++.+..++                   .
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s  284 (677)
T 1kb0_A          205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS  284 (677)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred             EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence            77542211                                13567888888888887664                   5


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCCccceeeeccC
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      |..+|.++|+. +|..........    . ........-+....+|   +.+++++.+|.++++|.++++......+...
T Consensus       285 v~AlD~~TG~~-~W~~~~~~~d~w----d-~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~  358 (677)
T 1kb0_A          285 IVALDPDTGKY-KWHYQETPGDNW----D-YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPV  358 (677)
T ss_dssp             EEEECTTTCCE-EEEEESSTTCCS----C-CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred             EEEEECCCCCE-EEEEecCCCccc----c-cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccccc
Confidence            99999999985 454432211000    0 0001122223333467   6788999999999999998865433332110


Q ss_pred             C---------Cce------------------------eeEEECCCCCCceeeecc-------------------------
Q psy17188        346 A---------PAC------------------------YALAISPDSKSPFFSSHH-------------------------  367 (504)
Q Consensus       346 ~---------~~i------------------------~~~~~~~~~~~~~~~~~~-------------------------  367 (504)
                      .         ..+                        ..++++|+....++.+..                         
T Consensus       359 ~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  438 (677)
T 1kb0_A          359 NWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT  438 (677)
T ss_dssp             SSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred             CcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccc
Confidence            0         000                        146777777642222110                         


Q ss_pred             ----------------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        368 ----------------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       368 ----------------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                                      ..+.|..||+.+++..-...      +...+....+..++.++++++.||.+++||.++++.+.
T Consensus       439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw  512 (677)
T 1kb0_A          439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW  512 (677)
T ss_dssp             TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             ccccccccccccCCCCCccEEEEEeCCCCcEEeecC------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence                            12778889987654322211      12233345566678889999999999999999998877


Q ss_pred             eecccCCCCceeEEEECCCCCEEEE
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFS  456 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s  456 (504)
                      ........ ...-+.+..+|+.+++
T Consensus       513 ~~~~~~~~-~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          513 EAPTGTGV-VAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             EEECSSCC-CSCCEEEEETTEEEEE
T ss_pred             eeeCCCCc-ccCCEEEEeCCEEEEE
Confidence            76654322 2233467778875443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.33  E-value=8.9e-08  Score=98.14  Aligned_cols=400  Identities=11%  Similarity=0.112  Sum_probs=231.8

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeec---------CCCcEEEEEEcCCCcEEEEecCCeEEEEeCC
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLS---------HGEVVCAVTISNPTKYVYTGGKGCVKVWDIS  142 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~  142 (504)
                      ..|.++...++|.+.... .. .++.++....  ....+.         ....|.++...++|.+.+....+-|.+++..
T Consensus       211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~--~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~  286 (781)
T 3v9f_A          211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTE--TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQ  286 (781)
T ss_dssp             SSEEEEEECTTCCEEEEE-TT-EEEEEETTTT--EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETT
T ss_pred             CceeEEEEcCCCCEEEEe-CC-cHheECCCCC--cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCC
Confidence            356666666666544332 22 4554432211  111111         2457999999999988776665678889987


Q ss_pred             CCCCCCcee-------ee--eecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceee-------eecCcCce
Q psy17188        143 QPGSKTPVS-------QL--DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-------LTSSAPAC  206 (504)
Q Consensus       143 ~~~~~~~~~-------~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~~~~~v  206 (504)
                      +........       ..  ...-....|.++...++|. |..|+.++-|..++...........       .......|
T Consensus       287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v  365 (781)
T 3v9f_A          287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV  365 (781)
T ss_dssp             CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred             CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence            643211110       00  0011346799999998887 5556667778999877554322110       01123568


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       207 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      .++...+++. |..|+.++-|..||..+++.....   ......|.++...+++. |..|+.++-|..+|..+++...+.
T Consensus       366 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~  443 (781)
T 3v9f_A          366 SSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIE  443 (781)
T ss_dssp             EEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECC
T ss_pred             EEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEec
Confidence            9999888776 455666667999998765433211   12346789998887775 455777677999998887754321


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec---cCCCceeeEEECCCCCC
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---SSAPACYALAISPDSKS  360 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~  360 (504)
                      ..             ......|.++...++++ |.+++. +-+..||..+.+........   .....+.++...+++. 
T Consensus       444 ~~-------------~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-  507 (781)
T 3v9f_A          444 LE-------------KNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-  507 (781)
T ss_dssp             ST-------------TTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-
T ss_pred             cC-------------CCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-
Confidence            10             11245688898888876 555555 55888998765433222111   1134678888888776 


Q ss_pred             ceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC-CC
Q psy17188        361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-SA  439 (504)
Q Consensus       361 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~  439 (504)
                       +.+ +...+-+..||....... .... ........|.++...++|.+.+. +.+|.+..||..+.+........+ ..
T Consensus       508 -lWi-gt~~~Gl~~~~~~~~~~~-~~~~-~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~~~~~~~gl~~  582 (781)
T 3v9f_A          508 -FWI-GTFGGGVGIYTPDMQLVR-KFNQ-YEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQVFQRKEGLPN  582 (781)
T ss_dssp             -EEE-EESSSCEEEECTTCCEEE-EECT-TTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCCCEEECGGGTCSC
T ss_pred             -EEE-EEcCCCEEEEeCCCCeEE-EccC-CCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCcEEEccccCCCCC
Confidence             333 444344666776543110 0100 01112456889999999885554 446654899987665332222111 22


Q ss_pred             CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC------ceEEEEEccCCCEEEEecCCC
Q psy17188        440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD------GASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ..|.++...++|++.+++ .+| |..++.++++. ..+....+      ...++...++|++++ |+.+|
T Consensus       583 ~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~-~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~G  648 (781)
T 3v9f_A          583 THIRAISEDKNGNIWAST-NTG-ISCYITSKKCF-YTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSING  648 (781)
T ss_dssp             CCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEE-EEECGGGTCCSSCEEEEEEEECTTSCEEE-EETTE
T ss_pred             ceEEEEEECCCCCEEEEc-CCc-eEEEECCCCce-EEecccCCccccccccCceEECCCCEEEE-ECCCc
Confidence            357788899888876654 555 77888776543 33432111      234667778887655 44443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.31  E-value=1.6e-10  Score=105.59  Aligned_cols=301  Identities=12%  Similarity=0.109  Sum_probs=178.1

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  197 (504)
                      +..+..++.+.+.+.++.|..|| .+++..   ....  .....+.++...+++. |..++.+  |..+|. +++.....
T Consensus        24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~---~~~~--~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~   93 (330)
T 3hxj_A           24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVK---WFFK--SGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF   93 (330)
T ss_dssp             CCEECTTSCEECSSTTTTTEEEC-TTSCEE---ESSC--GGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS
T ss_pred             CceEccCCeEEEEcCCCEEEEEC-CCCcEE---EEEe--cCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE
Confidence            34555677766655588899999 664321   1111  1233456777776665 5555544  888885 33332222


Q ss_pred             eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q psy17188        198 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG  277 (504)
Q Consensus       198 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~  277 (504)
                      ...  ........+.  +..+..++.++.|..+|.. ++.......+...+.++...+++. ++.++.++.|..+|.. +
T Consensus        94 ~~~--~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g  166 (330)
T 3hxj_A           94 DTK--KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G  166 (330)
T ss_dssp             CC-------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S
T ss_pred             ECC--CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C
Confidence            221  1112222232  4467778888999999988 777777665666667777777775 6667888999999998 5


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  357 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~  357 (504)
                      +. .|...              .....+.++...+++. +.+++  +.+..+| .+++  ...........+.++...++
T Consensus       167 ~~-~~~~~--------------~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~--~~~~~~~~~~~~~~~~~~~~  225 (330)
T 3hxj_A          167 TE-KWRFK--------------TNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGT--EKWNFYAGYWTVTRPAISED  225 (330)
T ss_dssp             CE-EEEEE--------------CSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSC--EEEEECCSSCCCSCCEECTT
T ss_pred             CE-eEEEe--------------cCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCc--EEEEEccCCcceeceEECCC
Confidence            53 22221              1123355666777777 44454  7899999 5543  23333334456778888887


Q ss_pred             CCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC
Q psy17188        358 SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  437 (504)
Q Consensus       358 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  437 (504)
                      +.   +..++.++.+..+|... ..   .....  .....+..+.+.+++ .|.+++.+|.|..+|. +++.......  
T Consensus       226 g~---l~v~t~~~gl~~~~~~g-~~---~~~~~--~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~--  292 (330)
T 3hxj_A          226 GT---IYVTSLDGHLYAINPDG-TE---KWRFK--TGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFET--  292 (330)
T ss_dssp             SC---EEEEETTTEEEEECTTS-CE---EEEEE--CSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEEC--
T ss_pred             Ce---EEEEcCCCeEEEECCCC-CE---eEEee--CCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEc--
Confidence            75   44455567777776422 11   11111  112223345566566 4667778888999996 5554444433  


Q ss_pred             CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        438 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       438 ~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      ....+.++...+++++ ..++.+|.+++...+.
T Consensus       293 ~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          293 GSWIIATPVIDENGTI-YFGTRNGKFYALFNLE  324 (330)
T ss_dssp             SSCCCSCCEECTTCCE-EEECTTSCEEEEEC--
T ss_pred             CCccccceEEcCCCEE-EEEcCCCeEEEEeccc
Confidence            2344666677777764 5578899999887654

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.31  E-value=1.8e-12  Score=119.91  Aligned_cols=206  Identities=12%  Similarity=0.088  Sum_probs=114.9

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCc
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV  293 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~  293 (504)
                      ++..+++++.|+.|+.||..+|+.+.++..  +.+.+..+..++..+++++.|+.|+.||..+|+.. |.....      
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~-w~~~~~------   78 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL-TKLPFT------   78 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS-EECSCC------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee-eeeecc------
Confidence            567899999999999999999999988875  55555556667778888899999999999887631 111100      


Q ss_pred             ccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEE
Q psy17188        294 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVK  373 (504)
Q Consensus       294 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~  373 (504)
                        ........++    +. ++..+++++.++.++.||.++++........                              
T Consensus        79 --~~~~~~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~------------------------------  121 (369)
T 2hz6_A           79 --IPELVQASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA------------------------------  121 (369)
T ss_dssp             --HHHHHTTCSC----C------CCCCEEEEEEEEECCC-----------------------------------------
T ss_pred             --CccccccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC------------------------------
Confidence              0000000000    01 2345666667777888877766422111100                              


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC--
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS--  451 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~--  451 (504)
                                           .    ...++|++..+++++.++.|+.||.++++.+........    ....+..+.  
T Consensus       122 ---------------------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~  172 (369)
T 2hz6_A          122 ---------------------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDY  172 (369)
T ss_dssp             ------------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTC
T ss_pred             ---------------------C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccc
Confidence                                 0    112334677888888889999999988876655443221    122334432  


Q ss_pred             -CEEEEeeCCCcEEEEEcCCcceEEEEeecCCceE-EEEEccCCCE
Q psy17188        452 -KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTK  495 (504)
Q Consensus       452 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~s~d~~~  495 (504)
                       ..+++++.||.|+.||..+|+.+.+... ..++. ...+++||..
T Consensus       173 ~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          173 KMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLR  217 (369)
T ss_dssp             CCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCE
T ss_pred             cceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceE
Confidence             5577788999999999999999887763 44443 3455667643

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.26  E-value=3.3e-10  Score=103.41  Aligned_cols=291  Identities=14%  Similarity=0.144  Sum_probs=174.9

Q ss_pred             EEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC
Q psy17188        165 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  244 (504)
Q Consensus       165 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h  244 (504)
                      .....++. |..++.++.|..|| .+++....  .......+.++...+++. |..++.+  |..+|. +++.+..+...
T Consensus        25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~--~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~   96 (330)
T 3hxj_A           25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWF--FKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTK   96 (330)
T ss_dssp             CEECTTSC-EECSSTTTTTEEEC-TTSCEEES--SCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-
T ss_pred             ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEE--EecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECC
Confidence            34444554 66677788899999 66554222  223334456777776765 5555544  888885 66655555433


Q ss_pred             CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC
Q psy17188        245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  324 (504)
Q Consensus       245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  324 (504)
                      ........+.  +..|..++.++.|..+|.. ++. .|....              ....+.++...++++ +++++.++
T Consensus        97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~-~~~~~~--------------~~~~~~~~~~~~~g~-l~vgt~~~  157 (330)
T 3hxj_A           97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTE-KWRFKT--------------KKAIYATPIVSEDGT-IYVGSNDN  157 (330)
T ss_dssp             ----CCEEEE--TTEEEEECTTSEEEEECTT-SCE-EEEEEC--------------SSCCCSCCEECTTSC-EEEECTTS
T ss_pred             CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCE-EEEEcC--------------CCceeeeeEEcCCCE-EEEEcCCC
Confidence            3323333333  4477888889999999988 653 333221              122344556666776 66677889


Q ss_pred             cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      .+..+|.. ++...  ........+..+...+++.  +++..   +.+..+| ..+...   .  ........+.++...
T Consensus       158 ~l~~~d~~-g~~~~--~~~~~~~~~~~~~~d~~g~--l~v~t---~~l~~~d-~~g~~~---~--~~~~~~~~~~~~~~~  223 (330)
T 3hxj_A          158 YLYAINPD-GTEKW--RFKTNDAITSAASIGKDGT--IYFGS---DKVYAIN-PDGTEK---W--NFYAGYWTVTRPAIS  223 (330)
T ss_dssp             EEEEECTT-SCEEE--EEECSSCCCSCCEECTTCC--EEEES---SSEEEEC-TTSCEE---E--EECCSSCCCSCCEEC
T ss_pred             EEEEECCC-CCEeE--EEecCCCceeeeEEcCCCE--EEEEe---CEEEEEC-CCCcEE---E--EEccCCcceeceEEC
Confidence            99999987 53322  3333344566777766765  44433   7788888 432211   1  111223456788888


Q ss_pred             CCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce
Q psy17188        405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  484 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v  484 (504)
                      ++|. |.+++.++.|..+|. +++.......  ....+..+.+.++++ |..++.+|.|..+|. +++.+..+......+
T Consensus       224 ~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~  297 (330)
T 3hxj_A          224 EDGT-IYVTSLDGHLYAINP-DGTEKWRFKT--GKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWII  297 (330)
T ss_dssp             TTSC-EEEEETTTEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCC
T ss_pred             CCCe-EEEEcCCCeEEEECC-CCCEeEEeeC--CCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccc
Confidence            8875 555667788888874 3443333322  222233446665664 556777888999995 788777776556667


Q ss_pred             EEEEEccCCCEEEEecCCC
Q psy17188        485 SCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       485 ~~~~~s~d~~~l~s~s~Dg  503 (504)
                      .++...++|+ |..++.+|
T Consensus       298 ~~~~~d~~g~-l~~gt~~G  315 (330)
T 3hxj_A          298 ATPVIDENGT-IYFGTRNG  315 (330)
T ss_dssp             SCCEECTTCC-EEEECTTS
T ss_pred             cceEEcCCCE-EEEEcCCC
Confidence            7888878876 45577666

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.24  E-value=1.4e-09  Score=108.54  Aligned_cols=321  Identities=12%  Similarity=0.101  Sum_probs=186.6

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--------ce-EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--------AC-YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  241 (504)
                      +..|++++.++.|..+|..+++............        .+ ..+++  .+..+++++.|+.|..+|.++|+.+..+
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            4456666667788888888776544333221100        00 11222  3457888889999999999999998887


Q ss_pred             cCCC----CCeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCC-CCCCc---ccc----------
Q psy17188        242 QGHT----DGASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPG-SKTPV---SQL----------  296 (504)
Q Consensus       242 ~~h~----~~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~-~~~~~---~~~----------  296 (504)
                      ....    ..+.+ ..+. ++ .++.+..      +|.|..+|.++|+. +|...... .....   ..+          
T Consensus       144 ~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  220 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKL-AWRFYTVPGDPALPYEHPELREAAKTWQGD  220 (668)
T ss_dssp             ECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCE-EEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred             ccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcE-EEEecccCCCCCccccccccccccccCCcc
Confidence            6421    11111 1111 34 5555543      58999999999985 46554311 10000   000          


Q ss_pred             ---eecccCCceEEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCCccceeeeccCC-------C
Q psy17188        297 ---DCLQRDNYIRSVKLLPDGRTLIVGGEASN-------------------LSIWDLASPTPRIKAELTSSA-------P  347 (504)
Q Consensus       297 ---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~v~d~~~~~~~~~~~~~~~~-------~  347 (504)
                         ...........++++++...++++..++.                   |..+|.++++.........+.       .
T Consensus       221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~  300 (668)
T 1kv9_A          221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ  300 (668)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence               00011122235788898888988877663                   999999998766555544332       1


Q ss_pred             ceeeEEECCCCC-CceeeeccCCCeEEEEecCCCCCCCcccccc-----cc---------------cC-----------C
Q psy17188        348 ACYALAISPDSK-SPFFSSHHYKSCVKVWDISQPGSKTPVSQLD-----CL---------------QR-----------D  395 (504)
Q Consensus       348 ~i~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----~~---------------~~-----------~  395 (504)
                      +.....+..+++ ..+++.++.+|.+.++|..+++.........     ..               ..           .
T Consensus       301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~  380 (668)
T 1kv9_A          301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA  380 (668)
T ss_dssp             CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred             CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence            222222223443 1257788899999999988765331110000     00               00           0


Q ss_pred             CceEEEEEcCCCCEEEEee------------------------------------CCCcEEEeeCCCCCcceeecccCCC
Q psy17188        396 NYIRSVKLLPDGRTLIVGG------------------------------------EASNLSIWDLASPTPRIKAELTSSA  439 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~  439 (504)
                      ..-..++++|+..++++..                                    .+|.|..||+.+++.+........ 
T Consensus       381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-  459 (668)
T 1kv9_A          381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-  459 (668)
T ss_dssp             SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-
T ss_pred             cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-
Confidence            0011367888777666421                                    237799999999887666554322 


Q ss_pred             CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce-EEEEEccCCC-EEEEe
Q psy17188        440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISADGT-KLWTG  499 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~s~d~~-~l~s~  499 (504)
                        .....+...+.++++++.||.++.||.++|+.+.+++...... .-+.+..+|+ +++.+
T Consensus       460 --~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~  519 (668)
T 1kv9_A          460 --WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIM  519 (668)
T ss_dssp             --CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             --CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEE
Confidence              2222444568899999999999999999999999887543211 2344455665 44433

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.22  E-value=7.4e-10  Score=105.07  Aligned_cols=243  Identities=11%  Similarity=0.084  Sum_probs=155.4

Q ss_pred             CCCCEEEEEeC-CCcEEEEECCCCeEEEeecC-CCCCeEEEEE-c-cCCCEEEEEc------------------CCCeEE
Q psy17188        213 PDSKVCFSCCS-DGNIAVWDLHNQTLVRQFQG-HTDGASCIDI-S-ADGTKLWTGG------------------LDNTVR  270 (504)
Q Consensus       213 ~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i~  270 (504)
                      +||++|+.... +..|.+.|+++.++...+.- ....+..+++ . |+++++++++                  .++.+.
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            37888877765 45699999999998885542 2345788888 4 8999998884                  345789


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC--------------------------
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--------------------------  324 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------  324 (504)
                      ++|..+.++. |.            +.   -......++++|+|+++++.+.+.                          
T Consensus       179 vID~~t~~v~-~q------------I~---Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~  242 (595)
T 1fwx_A          179 AVDADKWEVA-WQ------------VL---VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE  242 (595)
T ss_dssp             EEETTTTEEE-EE------------EE---ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred             EEECCCCeEE-EE------------EE---eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence            9999887642 21            11   111345677889999888887543                          


Q ss_pred             ------------cEEEEeCCCCCccc-eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCC------CCCc
Q psy17188        325 ------------NLSIWDLASPTPRI-KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG------SKTP  385 (504)
Q Consensus       325 ------------~i~v~d~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~------~~~~  385 (504)
                                  .+.+.|.++.+... ...+.. .....++.++||++. +++++..+..|.++|+.+..      ....
T Consensus       243 ~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~-v~V~~~~s~~VsVid~~~~~~~~~~~l~~~  320 (595)
T 1fwx_A          243 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKH-LCVAGKLSPTVTVLDVTRFDAVFYENADPR  320 (595)
T ss_dssp             HHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSE-EEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred             EeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCE-EEEeCCCCCeEEEEECcccccccccccCcc
Confidence                        36666666521111 222222 225678999999997 77788889999999998531      1111


Q ss_pred             ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC--------cceeecccCCCCc-----eeEEEECCCCC
Q psy17188        386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT--------PRIKAELTSSAPA-----CYALAISPDSK  452 (504)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~-----v~~l~~s~~~~  452 (504)
                      ........-......++|+|+|....+...|++|.+||+.+..        ......+..+..+     -..+.++|||+
T Consensus       321 ~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk  400 (595)
T 1fwx_A          321 SAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND  400 (595)
T ss_dssp             GGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred             cceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence            1111222345567899999999444456678999999987610        1122222222221     12235689999


Q ss_pred             EEEEeeC---CCc----------EEEEEcCCcce
Q psy17188        453 VCFSCCS---DGN----------IAVWDLHNQTL  473 (504)
Q Consensus       453 ~l~s~~~---dg~----------i~iwd~~~~~~  473 (504)
                      +|++...   |+.          -.++|+..+++
T Consensus       401 ~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m  434 (595)
T 1fwx_A          401 WLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM  434 (595)
T ss_dssp             EEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred             EEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence            9998864   432          28899976553

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.21  E-value=6.6e-09  Score=101.33  Aligned_cols=319  Identities=12%  Similarity=0.110  Sum_probs=181.4

Q ss_pred             CCEEEEecC-CCcEEEEeC-CCCCccceeeeecCcC---------ceEEEEECCCCCE----EEEEeCCCcEEEEECCCC
Q psy17188        171 GRTLIVGGE-ASNLSIWDL-ASPTPRIKAELTSSAP---------ACYALAISPDSKV----CFSCCSDGNIAVWDLHNQ  235 (504)
Q Consensus       171 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~----l~~~~~dg~i~iwd~~~~  235 (504)
                      +..|++++. ++.|.-+|. .+++............         ....++++|.+..    +++++.|+.|..+|.++|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            345555555 677888888 7776544433322110         0123455443334    888889999999999999


Q ss_pred             eEEEeecCCCC----CeEE-EEEccCCCEEEEEc------CCCeEEEEECCCCceEEEeecCCCCCCCc-----------
Q psy17188        236 TLVRQFQGHTD----GASC-IDISADGTKLWTGG------LDNTVRSWDLREGCVKVWDISQPGSKTPV-----------  293 (504)
Q Consensus       236 ~~~~~~~~h~~----~v~~-~~~~~~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~-----------  293 (504)
                      +.+........    .+.+ ..+. ++ .++.++      .++.|+.+|.++|+. +|...........           
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~-~W~~~~~~~~~~~~~~p~~~~~~~  218 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQ-VWRAYATGPDKDLLLASDFNIKNP  218 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCE-EEEEESSSCHHHHTBCTTTTTTCG
T ss_pred             CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcE-EEEEcCCCCccccccccccccccc
Confidence            99877653220    1211 1111 34 555554      489999999999985 4554433211000           


Q ss_pred             -------------ccceecccCCceEEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCCccceeeecc
Q psy17188        294 -------------SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------------SNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       294 -------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~  344 (504)
                                   ...........-..+++.++...++.+..+                +.|..+|.++++.....+...
T Consensus       219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~  298 (599)
T 1w6s_A          219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP  298 (599)
T ss_dssp             GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred             cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence                         000000000011245677777888887665                379999999987665555544


Q ss_pred             CCC-------ceeeEEEC-CCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccc-------cc-cCC------------
Q psy17188        345 SAP-------ACYALAIS-PDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLD-------CL-QRD------------  395 (504)
Q Consensus       345 ~~~-------~i~~~~~~-~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------~~-~~~------------  395 (504)
                      +..       ...-+... .+++. .+++.++.+|.+.++|.++++.........       .. ...            
T Consensus       299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~  378 (599)
T 1w6s_A          299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM  378 (599)
T ss_dssp             TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred             CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence            321       11112221 34521 256778889999999987764322111100       00 000            


Q ss_pred             --------------CceEEEEEcCCCCEEEEee---------------------------------------CCCcEEEe
Q psy17188        396 --------------NYIRSVKLLPDGRTLIVGG---------------------------------------EASNLSIW  422 (504)
Q Consensus       396 --------------~~i~~~~~s~~g~~l~~~~---------------------------------------~dg~i~iw  422 (504)
                                    ..-..++++|+..++++..                                       ..|.|..|
T Consensus       379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~  458 (599)
T 1w6s_A          379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY  458 (599)
T ss_dssp             TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred             CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence                          0112466777766665431                                       34678999


Q ss_pred             eCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCCE
Q psy17188        423 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTK  495 (504)
Q Consensus       423 d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~~  495 (504)
                      |+.+++.+........   ...-.+...+.+++.++.||.++.||.++|+++.+++..... ..-+.+..||+.
T Consensus       459 D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q  529 (599)
T 1w6s_A          459 NAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ  529 (599)
T ss_dssp             CTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ECCCCCEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence            9998887666543321   111112235678888999999999999999999988744322 223556677764

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.21  E-value=1.1e-08  Score=99.91  Aligned_cols=320  Identities=13%  Similarity=0.108  Sum_probs=180.5

Q ss_pred             CCEEEEecC-CCcEEEEeC-CCCCccceeeeecCcC--------c-eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy17188        171 GRTLIVGGE-ASNLSIWDL-ASPTPRIKAELTSSAP--------A-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  239 (504)
Q Consensus       171 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~--------~-v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~  239 (504)
                      +..+++++. ++.|.-+|. .+++......+.....        . ...++.  ++..+++++.|+.|..+|.++++.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            344555555 677888888 7776544433322110        0 011222  34578888889999999999999888


Q ss_pred             eecCCCC----CeEE-EEEccCCCEEEEEcC------CCeEEEEECCCCceEEEeecCCCCCC-----C-------c---
Q psy17188        240 QFQGHTD----GASC-IDISADGTKLWTGGL------DNTVRSWDLREGCVKVWDISQPGSKT-----P-------V---  293 (504)
Q Consensus       240 ~~~~h~~----~v~~-~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~-----~-------~---  293 (504)
                      ++.....    .+.+ .... ++ .++.++.      ++.|..+|.++|+. +|.........     +       .   
T Consensus       140 ~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~~~~~~~~~p~~~~~~~~~G~  216 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGEL-KWRAFATGSDDSVRLAKDFNSANPHYGQ  216 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCE-EEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred             EecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcE-EEEEccCCCccccccCcccccccccccc
Confidence            7653220    1211 1111 34 5555554      79999999999984 55544322110     0       0   


Q ss_pred             ---------ccceecccCCceEEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCCccceeeeccCCC-
Q psy17188        294 ---------SQLDCLQRDNYIRSVKLLPDGRTLIVGGEA----------------SNLSIWDLASPTPRIKAELTSSAP-  347 (504)
Q Consensus       294 ---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~~~-  347 (504)
                               ..............+++.++...++.+..+                +.|..+|.++++.....+...+.. 
T Consensus       217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~  296 (571)
T 2ad6_A          217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW  296 (571)
T ss_dssp             SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred             cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence                     000000001111245677777777776542                258999999887655554433211 


Q ss_pred             ------ceeeEEECCCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccccc--------cCCCc---------------
Q psy17188        348 ------ACYALAISPDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--------QRDNY---------------  397 (504)
Q Consensus       348 ------~i~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~---------------  397 (504)
                            ...-+....+++. .+++.+..++.+.++|..+++...........        ....+               
T Consensus       297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~  376 (571)
T 2ad6_A          297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT  376 (571)
T ss_dssp             CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred             ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence                  1111222235531 14666778899999998776432211100000        00000               


Q ss_pred             -----------eEEEEEcCCCCEEEEee-------------------------------------CCCcEEEeeCCCCCc
Q psy17188        398 -----------IRSVKLLPDGRTLIVGG-------------------------------------EASNLSIWDLASPTP  429 (504)
Q Consensus       398 -----------i~~~~~s~~g~~l~~~~-------------------------------------~dg~i~iwd~~~~~~  429 (504)
                                 -..++++|+..++++..                                     .+|.|..||..+++.
T Consensus       377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~  456 (571)
T 2ad6_A          377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA  456 (571)
T ss_dssp             EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred             EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence                       12467888877777653                                     347899999999887


Q ss_pred             ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCCEEEE
Q psy17188        430 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGTKLWT  498 (504)
Q Consensus       430 ~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~~l~s  498 (504)
                      +.........   ....+...+..++.++.||.|+.||.++|+++.+++..... -..+.+..+|+.++.
T Consensus       457 ~W~~~~~~~~---~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          457 KWTKWEKFAA---WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             EEEEEESSCC---CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             EEEecCCCCc---cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence            7665543321   11122334677888999999999999999999988743321 122345577765443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.18  E-value=5.7e-08  Score=85.48  Aligned_cols=251  Identities=15%  Similarity=0.094  Sum_probs=148.0

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccc---eeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEeecCCCCC
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRI---KAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDG  247 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~  247 (504)
                      .+|+.+.. +.|+.++++......   ...+......+..++|++++..|+.+. .++.|..+++........+......
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~   80 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence            45555543 478888887644221   111222233467899999766555544 5678999998766544334333357


Q ss_pred             eEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC---
Q psy17188        248 ASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---  323 (504)
Q Consensus       248 v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---  323 (504)
                      ...+++++++..| ++-...+.|.+++++.......               ..........++++|++..|+.+...   
T Consensus        81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~---------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~  145 (267)
T 1npe_A           81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL---------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDN  145 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---------------ECSSCSSEEEEEEETTTTEEEEEECCSSS
T ss_pred             ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE---------------EECCCCCccEEEEeeCCCEEEEEECCCCC
Confidence            7899999975554 4555667899999875432111               01112456889999976666665432   


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  403 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~  403 (504)
                      +.|..+++......                        .+.           .                ........+++
T Consensus       146 ~~I~~~~~dg~~~~------------------------~~~-----------~----------------~~~~~P~gia~  174 (267)
T 1npe_A          146 PKIETSHMDGTNRR------------------------ILA-----------Q----------------DNLGLPNGLTF  174 (267)
T ss_dssp             CEEEEEETTSCCCE------------------------EEE-----------C----------------TTCSCEEEEEE
T ss_pred             cEEEEEecCCCCcE------------------------EEE-----------E----------------CCCCCCcEEEE
Confidence            45655554321100                        000           0                00122447888


Q ss_pred             cCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEcCCcceEEEEeecC
Q psy17188        404 LPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       404 s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~h~  481 (504)
                      ++++..|+.+. ..+.|..+|...........  . ......++..  +..|..+. .++.|.++|..+++.+..+....
T Consensus       175 d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~  249 (267)
T 1npe_A          175 DAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--G-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK  249 (267)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--C-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS
T ss_pred             cCCCCEEEEEECCCCEEEEEecCCCceEEEec--C-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc
Confidence            88766665544 45678888876433222221  1 1223455654  45555554 56899999999999988886443


Q ss_pred             -CceEEEEEccCCC
Q psy17188        482 -DGASCIDISADGT  494 (504)
Q Consensus       482 -~~v~~~~~s~d~~  494 (504)
                       .....+++.|++.
T Consensus       250 ~~~p~gi~~~~~~~  263 (267)
T 1npe_A          250 QTRLYGITIALSQC  263 (267)
T ss_dssp             CCCCCCEEEECSCC
T ss_pred             ccccceeeecCccC
Confidence             2477888988864

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.16  E-value=3.5e-08  Score=96.44  Aligned_cols=319  Identities=14%  Similarity=0.077  Sum_probs=179.6

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCc-------eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPA-------CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT  245 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~  245 (504)
                      .+++++.++.|.-+|..+++.............       ...+++  .+..++.++.|+.|..+|.++|+.+.......
T Consensus        70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~  147 (582)
T 1flg_A           70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFAD  147 (582)
T ss_dssp             EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred             EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence            444444434488888887775544433321110       011222  34577888899999999999999987765332


Q ss_pred             C----CeE-EEEEcc---CCC-EEEEEc------CCCeEEEEECCCCceEEEeecCCCCCC--------------Ccc--
Q psy17188        246 D----GAS-CIDISA---DGT-KLWTGG------LDNTVRSWDLREGCVKVWDISQPGSKT--------------PVS--  294 (504)
Q Consensus       246 ~----~v~-~~~~~~---~~~-~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~--------------~~~--  294 (504)
                      .    .+. ...+..   +++ .+++++      .++.|+.+|.++|+. +|.........              ...  
T Consensus       148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~-~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w  226 (582)
T 1flg_A          148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE-IWMRPFVEGHMGRLNGKDSTVTGDVKAPSW  226 (582)
T ss_dssp             GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE-EEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred             CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE-EeecCCCccccccccCcccccccccccccC
Confidence            1    111 111111   233 566654      378999999999985 45443221000              000  


Q ss_pred             --c---------ceecccCCceEEEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCCccce
Q psy17188        295 --Q---------LDCLQRDNYIRSVKLLPDGRTLIVGGE--------------------A----SNLSIWDLASPTPRIK  339 (504)
Q Consensus       295 --~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------d----g~i~v~d~~~~~~~~~  339 (504)
                        .         .........-..++++|+...++++..                    |    +.|..+|.++++....
T Consensus       227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~  306 (582)
T 1flg_A          227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF  306 (582)
T ss_dssp             CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred             CCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEE
Confidence              0         000001111135677888788887763                    2    5799999999876666


Q ss_pred             eeeccCCC-------ceeeEEEC-CCCCC-ceeeeccCCCeEEEEecCCCCCCCcccccc--------------------
Q psy17188        340 AELTSSAP-------ACYALAIS-PDSKS-PFFSSHHYKSCVKVWDISQPGSKTPVSQLD--------------------  390 (504)
Q Consensus       340 ~~~~~~~~-------~i~~~~~~-~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~--------------------  390 (504)
                      .+...+..       ...-+... .+++. .+++.++.+|.+.++|.++++.........                    
T Consensus       307 ~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~  386 (582)
T 1flg_A          307 YQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREG  386 (582)
T ss_dssp             EESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTT
T ss_pred             EeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccc
Confidence            55543321       11111111 34531 267778899999999987654321111000                    


Q ss_pred             cc---------cC-----------CCceEEEEEcCCCCEEEEee---------------------------------CCC
Q psy17188        391 CL---------QR-----------DNYIRSVKLLPDGRTLIVGG---------------------------------EAS  417 (504)
Q Consensus       391 ~~---------~~-----------~~~i~~~~~s~~g~~l~~~~---------------------------------~dg  417 (504)
                      ..         ..           ......++++|+..++++..                                 .+|
T Consensus       387 ~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G  466 (582)
T 1flg_A          387 QRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVG  466 (582)
T ss_dssp             CSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSE
T ss_pred             cCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcc
Confidence            00         00           00012456777665555432                                 257


Q ss_pred             cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce-EEEEEccCCCEE
Q psy17188        418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISADGTKL  496 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~s~d~~~l  496 (504)
                      .|..||+.+++.+.........   ..-.....+.+++.++.||.++.||.++|+++.+++...+.. .-+.+..||+..
T Consensus       467 ~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY  543 (582)
T 1flg_A          467 SLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             EEEEECTTTCCEEEEEEESSCC---CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             eEEEEECCCCCEEEEecCCCCC---cccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence            8999999999877665543221   111122246788889999999999999999999888543322 236677788643


Q ss_pred             E
Q psy17188        497 W  497 (504)
Q Consensus       497 ~  497 (504)
                      +
T Consensus       544 v  544 (582)
T 1flg_A          544 L  544 (582)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.16  E-value=6.7e-10  Score=105.39  Aligned_cols=255  Identities=15%  Similarity=0.155  Sum_probs=161.1

Q ss_pred             CCCEEEEecC-CCcEEEEeCCCCCccceeeeecCcCceEEEEE-C-CCCCEEEEEe------------------CCCcEE
Q psy17188        170 DGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAI-S-PDSKVCFSCC------------------SDGNIA  228 (504)
Q Consensus       170 ~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~------------------~dg~i~  228 (504)
                      ||++|..... +..|.+.|+++.+...+..+..- .....+++ + |+++++++++                  .++.+.
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            8888887654 55699999998765443344322 34678887 5 8999998885                  245799


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---------------eEEEEECCC-------------CceE
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---------------TVRSWDLRE-------------GCVK  280 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---------------~i~~wd~~~-------------~~~~  280 (504)
                      ++|.++.+.+.++.--. ....++++|+|+++++.+.+.               .|.+.|...             +.+.
T Consensus       179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~  257 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  257 (595)
T ss_dssp             EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence            99999999988887322 456788999999999888653               345554331             1233


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCc----------cceeeeccCCCce
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP----------RIKAELTSSAPAC  349 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~----------~~~~~~~~~~~~i  349 (504)
                      +.+....... .  ............++.++|||+++++++ .+.++.++|+.+.+.          ....+. .-....
T Consensus       258 VID~~~~~~~-~--~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP  333 (595)
T 1fwx_A          258 VVDGRKEASS-L--FTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGP  333 (595)
T ss_dssp             EEECSGGGCC-S--SEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCE
T ss_pred             EEeCcccCCc-e--eEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCc
Confidence            3333221000 0  011222334567899999999888765 567899999985421          111222 223467


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCC-------CCCCcccccccccCCC---ceEEEEEcCCCCEEEEeeCC--C
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQP-------GSKTPVSQLDCLQRDN---YIRSVKLLPDGRTLIVGGEA--S  417 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~~~~~---~i~~~~~s~~g~~l~~~~~d--g  417 (504)
                      ..++|+++| . ++++...++.|.+||+...       .....+..+......+   .-..+.++|||++|++.+.-  .
T Consensus       334 ~h~aF~~dG-~-aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd  411 (595)
T 1fwx_A          334 LHTAFDGRG-N-AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD  411 (595)
T ss_dssp             EEEEECTTS-E-EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred             ceEEECCCC-e-EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence            899999999 3 8888889999999998751       1111122221110000   00122457999999997642  2


Q ss_pred             cE-----------EEeeCCCCCccee
Q psy17188        418 NL-----------SIWDLASPTPRIK  432 (504)
Q Consensus       418 ~i-----------~iwd~~~~~~~~~  432 (504)
                      .+           .++|+..++...+
T Consensus       412 r~~~~gp~~~~~~ql~dis~~~m~lv  437 (595)
T 1fwx_A          412 RFLNVGPLKPENDQLIDISGDKMVLV  437 (595)
T ss_dssp             SSCCCCSSCCEEEEEEECSSSSCEEE
T ss_pred             ccccCCCCCCCcceEEEcCCCcEEEE
Confidence            23           8899976655443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.13  E-value=1.7e-11  Score=113.35  Aligned_cols=187  Identities=11%  Similarity=0.069  Sum_probs=96.5

Q ss_pred             CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCc
Q psy17188        125 TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  203 (504)
Q Consensus       125 ~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  203 (504)
                      +..|++++ |+.|+.||.++++......     .  +.+.+..+..+++.+++++.|+.|+.||.++++.......... 
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~-----~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-   80 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTGSIKWTLK-----E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-   80 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEE-----C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEEEec-----C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-
Confidence            45555555 9999999998875432222     1  3444555566787888888999999999987765332222110 


Q ss_pred             CceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        204 PACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       204 ~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      ..+. ...+. ++..+++++.|+.|+.||.++|+.+..+..+.    ...++|++..+++++.|+.|+.||.++|+. +|
T Consensus        81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~-~W  154 (369)
T 2hz6_A           81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL-RW  154 (369)
T ss_dssp             HHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC-CC
T ss_pred             cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE-EE
Confidence            0010 01111 34467888889999999999999988877553    234566788999999999999999999873 22


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVGGEASNLSIWDLASPTPRIKAE  341 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~~~~~~  341 (504)
                      ...            ...    .....+..+.   ..+++++.+|.++.||.++++......
T Consensus       155 ~~~------------~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~  200 (369)
T 2hz6_A          155 NAT------------YFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN  200 (369)
T ss_dssp             EEE------------EEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred             eEe------------ccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence            211            000    1112223321   457778899999999999886544333

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.12  E-value=4.8e-09  Score=105.05  Aligned_cols=273  Identities=13%  Similarity=0.176  Sum_probs=164.4

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCC----------e-EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        215 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----------A-SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       215 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      +..+++++.++.|..+|.++|+.+.++......          + ..+.+  ++..++.++.|+.|..+|.++|+. +|.
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~-~W~  146 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQR-AWS  146 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE-EEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCE-eee
Confidence            457777888899999999999999888643221          0 11222  355888899999999999999984 455


Q ss_pred             ecCC-CCCCCcccceecccCCceEEEEEcCCCCEEEEEe------CCCcEEEEeCCCCCccceeeeccC-----------
Q psy17188        284 ISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------EASNLSIWDLASPTPRIKAELTSS-----------  345 (504)
Q Consensus       284 ~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~~~~~~~~~~~-----------  345 (504)
                      .... .....     ......++    + .++ .++++.      .++.|+.||.++++..........           
T Consensus       147 ~~~~~~~~~~-----~~~~~sP~----v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~  215 (689)
T 1yiq_A          147 VDTRADHKRS-----YTITGAPR----V-VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGM  215 (689)
T ss_dssp             EECCSCTTSC-----CBCCSCCE----E-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHH
T ss_pred             ecCcCCCCCC-----ccccCCcE----E-ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccc
Confidence            4432 10000     00000111    1 133 445443      368899999998875544432110           


Q ss_pred             ------------------CCceeeEEECCCCCCceeeeccCCC-------------------eEEEEecCCCCCCCcccc
Q psy17188        346 ------------------APACYALAISPDSKSPFFSSHHYKS-------------------CVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       346 ------------------~~~i~~~~~~~~~~~~~~~~~~~~~-------------------~i~i~d~~~~~~~~~~~~  388 (504)
                                        ......+++.|+..  ++..+..++                   .|..+|.++++..-....
T Consensus       216 ~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~--~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~  293 (689)
T 1yiq_A          216 EIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN--LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT  293 (689)
T ss_dssp             HHHHTTCCSSTHHHHCEECCCCSCEEEETTTT--EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred             cccccccCCceeeecCCCCccccceeEcCCCC--EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeec
Confidence                              00112567777766  444454444                   489999887654322221


Q ss_pred             cccc----cCCCceEEEEEcCCCC---EEEEeeCCCcEEEeeCCCCCcceeecccC------------------------
Q psy17188        389 LDCL----QRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTS------------------------  437 (504)
Q Consensus       389 ~~~~----~~~~~i~~~~~s~~g~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------  437 (504)
                      ....    .............+|+   .++.++.+|.++++|.++++.+....+..                        
T Consensus       294 ~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~  373 (689)
T 1yiq_A          294 TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYW  373 (689)
T ss_dssp             STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTT
T ss_pred             CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhcccc
Confidence            1000    0111222222223565   78899999999999999998763322211                        


Q ss_pred             --CCC-----------ceeEEEECCCCCEEEEeeC---------------------------------------------
Q psy17188        438 --SAP-----------ACYALAISPDSKVCFSCCS---------------------------------------------  459 (504)
Q Consensus       438 --~~~-----------~v~~l~~s~~~~~l~s~~~---------------------------------------------  459 (504)
                        ...           .-..++++|+..++++...                                             
T Consensus       374 ~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~  453 (689)
T 1yiq_A          374 KNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSW  453 (689)
T ss_dssp             TSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTC
T ss_pred             CCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCc
Confidence              000           0112688998888876532                                             


Q ss_pred             CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +|.|+.||+.+++.+.+++.+. ++..-.++..+..++.++.||.
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~  497 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGR  497 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSE
T ss_pred             ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCc
Confidence            3779999999999998887554 3333456667888888888873

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.09  E-value=1.7e-07  Score=84.20  Aligned_cols=235  Identities=14%  Similarity=0.102  Sum_probs=142.1

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCceEE
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCVKV  281 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~  281 (504)
                      .....++|+++++++++-..++.|..||.... ....+. ....+..+++.++++++++....  ..|..+|..++++..
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            34678999999987776667889999997754 333333 34568899999999866655432  257777877877543


Q ss_pred             EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee--------eeccCCCceeeEE
Q psy17188        282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA--------ELTSSAPACYALA  353 (504)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--------~~~~~~~~i~~~~  353 (504)
                      ....              ........++..+++..+++-..++.|+++|....+.....        ...........+ 
T Consensus       110 ~~~~--------------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-  174 (306)
T 2p4o_A          110 LLTL--------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-  174 (306)
T ss_dssp             EEEC--------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred             EEeC--------------CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence            2110              11122344555555544444445788999987653211110        000111233444 


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                       +++++. ++++....+.|..|++.............   .......++++++|+++++....+.|.+++.. ++.....
T Consensus       175 -s~dg~~-lyv~d~~~~~I~~~~~~~~g~~~~~~~~~---~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~  248 (306)
T 2p4o_A          175 -KRFGNF-LYVSNTEKMLLLRIPVDSTDKPGEPEIFV---EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA  248 (306)
T ss_dssp             -EEETTE-EEEEETTTTEEEEEEBCTTSCBCCCEEEE---ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred             -CcCCCE-EEEEeCCCCEEEEEEeCCCCCCCccEEEe---ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence             777764 66677778899999987521111111111   11234579999999887776677889999975 4432222


Q ss_pred             cccCCCCceeEEEEC---CCCCEEEEeeCCC
Q psy17188        434 ELTSSAPACYALAIS---PDSKVCFSCCSDG  461 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s---~~~~~l~s~~~dg  461 (504)
                      .........++++|.   ||++.|+.++..+
T Consensus       249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             ecccccCCceEEEEecccCCCCEEEEECCCC
Confidence            233233557899998   8888777665543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=99.09  E-value=1e-05  Score=79.60  Aligned_cols=414  Identities=12%  Similarity=0.064  Sum_probs=219.1

Q ss_pred             CCCcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeeecC-CCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCC
Q psy17188         70 GGKPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTLSH-GEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPG  145 (504)
Q Consensus        70 ~~~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~  145 (504)
                      +.+.+..+++++.+ .+.-.....+.+..............+.. -.....+++.+.++ +.++-. .+.|.+.+++...
T Consensus        38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~  117 (619)
T 3s94_A           38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL  117 (619)
T ss_dssp             CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence            34567788888644 45545555555555443332211222222 25688999998554 444544 7899999987532


Q ss_pred             CCCceeeeeecCCCCceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188        146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-  222 (504)
Q Consensus       146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-  222 (504)
                      . ..+.    ...-.....|++.|.+.+|+.+..  .+.|...+++....  .............|++.+++..|+.+. 
T Consensus       118 ~-~~l~----~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~~P~Glald~~~~~LY~aD~  190 (619)
T 3s94_A          118 R-KVLF----WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADA  190 (619)
T ss_dssp             C-EEEE----CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSSEEEEEEETTTTEEEEEET
T ss_pred             E-EEEE----eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce--EEEEeCCCCCCcEEEEEccCCEEEEEeC
Confidence            1 1111    123345778999997666666543  45677777764332  222222344578999998766666554 


Q ss_pred             CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE--------------EEeec-CC
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK--------------VWDIS-QP  287 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~--------------~~~~~-~~  287 (504)
                      ..+.|...|++.........+......++++..+ ..+++-...+.|...|..+++..              ++... .+
T Consensus       191 ~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp  269 (619)
T 3s94_A          191 KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP  269 (619)
T ss_dssp             TTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSC
T ss_pred             CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCC
Confidence            4677999998754433333322233456777655 45555556778999998776421              11100 00


Q ss_pred             CCCCCcc------cceecccC--CceEEEE-----EcCC--------CCEEEEEeCCCcEEEEeCCCCCccceeeeccCC
Q psy17188        288 GSKTPVS------QLDCLQRD--NYIRSVK-----LLPD--------GRTLIVGGEASNLSIWDLASPTPRIKAELTSSA  346 (504)
Q Consensus       288 ~~~~~~~------~~~~~~~~--~~v~~~~-----~~~~--------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~  346 (504)
                      ....+..      ...+....  ....|.+     ..++        ..+|+.+ ..+.|+..++..............-
T Consensus       270 ~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l  348 (619)
T 3s94_A          270 NATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDI  348 (619)
T ss_dssp             CCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCC
T ss_pred             CccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE-cccceEEEecCCCccceeEEecccc
Confidence            0000000      00000000  0111111     0111        1234444 3456777777655322211111122


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLA  425 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~  425 (504)
                      ..+..+++.+.++. ++.+-...+.|+.++..........     ...-.....+++...+..|+ +-...+.|.+.++.
T Consensus       349 ~~~~~ld~d~~~~~-ly~sD~~~~~I~r~~~~g~~~~~v~-----~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~  422 (619)
T 3s94_A          349 RHAIAIDYDPVEGY-IYWTDDEVRAIRRSFIDGSGSQFVV-----TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN  422 (619)
T ss_dssp             SSEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSCEEEE-----CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CccEEEEEEcCCCe-EEEEeCCCCeEEEEEcCCCccEEEE-----ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence            35678888886554 5666666788888887653221111     11123455899987555454 44456789999987


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCCEEEEeeC--CCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ........  .........+++.|...+|..+..  ...|...+++...........-...+.|+++++++.|+.+.
T Consensus       423 G~~~~~l~--~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD  497 (619)
T 3s94_A          423 GTMRKILI--SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGD  497 (619)
T ss_dssp             SCSCEEEE--CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             CCeEEEEE--ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEE
Confidence            54322222  223445788999997555555443  35677677653332222222334678899998777776654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.08  E-value=1.5e-07  Score=84.54  Aligned_cols=243  Identities=12%  Similarity=0.093  Sum_probs=143.3

Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      .+.+..+.. ......++|+++++++++-..++.|..||........+                 .....+..++++++|
T Consensus        22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~-----------------~~~~~p~gia~~~dG   83 (306)
T 2p4o_A           22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHA-----------------TVEGKVSGLAFTSNG   83 (306)
T ss_dssp             EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE-----------------ECSSEEEEEEECTTS
T ss_pred             ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEE-----------------eCCCCceeEEEcCCC
Confidence            455555643 25678899999998777777889999999876533222                 122457899999999


Q ss_pred             CEEEEEeCCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC----c-cc
Q psy17188        315 RTLIVGGEAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT----P-VS  387 (504)
Q Consensus       315 ~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~----~-~~  387 (504)
                      +++++.....  .|..+|..+++......... ......++..+++.  ++++...++.|..+|........    . ..
T Consensus        84 ~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~-~~~~~g~~~~~~~~--~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~  160 (306)
T 2p4o_A           84 DLVATGWNADSIPVVSLVKSDGTVETLLTLPD-AIFLNGITPLSDTQ--YLTADSYRGAIWLIDVVQPSGSIWLEHPMLA  160 (306)
T ss_dssp             CEEEEEECTTSCEEEEEECTTSCEEEEEECTT-CSCEEEEEESSSSE--EEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred             cEEEEeccCCcceEEEEcCCCCeEEEEEeCCC-ccccCcccccCCCc--EEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence            9666554332  46677766654332222211 12234444444433  45555567888888865321000    0 00


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCC-CCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLAS-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  465 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i  465 (504)
                      .......-.....+  +++++.|+++. ..+.|..|++.. ++......+.. ......++++++|+++++....+.|.+
T Consensus       161 ~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~  237 (306)
T 2p4o_A          161 RSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVR  237 (306)
T ss_dssp             CSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEE
T ss_pred             cccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEE
Confidence            00000111233445  78887766654 467899999874 22111111100 123455799999998777777889999


Q ss_pred             EEcCCcceEE--EEeecCCceEEEEEc---cCCCEEEEecCC
Q psy17188        466 WDLHNQTLVR--QFQGHTDGASCIDIS---ADGTKLWTGGLD  502 (504)
Q Consensus       466 wd~~~~~~~~--~~~~h~~~v~~~~~s---~d~~~l~s~s~D  502 (504)
                      ++.. ++...  .+.......++++|.   +|++.|+.++..
T Consensus       238 ~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          238 IAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             ECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             ECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence            9975 65532  233233568999999   898888776543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.07  E-value=1.7e-08  Score=85.70  Aligned_cols=193  Identities=15%  Similarity=0.157  Sum_probs=120.6

Q ss_pred             eEEEeecCCCCCe--EEEEEccCCCEEEEEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        236 TLVRQFQGHTDGA--SCIDISADGTKLWTGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       236 ~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                      +.+.++. |....  ..+.|+ ++.++.+.+.+|  .|+++|+.++++..             ..   ............
T Consensus        32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~-------------~~---~l~~~~FgeGit   93 (262)
T 3nol_A           32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ-------------QI---ELGKRYFGEGIS   93 (262)
T ss_dssp             EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE-------------EE---ECCTTCCEEEEE
T ss_pred             EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE-------------EE---ecCCccceeEEE
Confidence            4556664 65444  889998 676677777766  89999999998532             11   111222222222


Q ss_pred             CCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccc
Q psy17188        312 PDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLD  390 (504)
Q Consensus       312 ~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~  390 (504)
                      ++++.|.... .++.+.+||.++.+........            +.                                 
T Consensus        94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~------------~e---------------------------------  128 (262)
T 3nol_A           94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD------------GE---------------------------------  128 (262)
T ss_dssp             EETTEEEEEESSSSEEEEEETTTCCEEEEEECS------------SC---------------------------------
T ss_pred             EeCCEEEEEEeeCCEEEEEECccCcEEEEEECC------------CC---------------------------------
Confidence            2344554443 4677888887766422211110            00                                 


Q ss_pred             cccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        391 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       391 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                               ...+++|++.|+.+..++.|.++|..+.+...........   ..++.+.|. +|+..+..-.+..|.+.|
T Consensus       129 ---------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          129 ---------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             ---------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred             ---------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence                     1122345666777666777999998877665555443222   234557776 676665555688999999


Q ss_pred             cCCcceEEEEeec------------CCceEEEEEccCCCEEEEecC
Q psy17188        468 LHNQTLVRQFQGH------------TDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       468 ~~~~~~~~~~~~h------------~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      .++++.+..+...            .+..+.|+|+|+++.|+..|.
T Consensus       199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            9999999888742            134689999999888887764

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.07  E-value=1.9e-07  Score=84.57  Aligned_cols=244  Identities=11%  Similarity=0.058  Sum_probs=147.3

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-C------------------CCCCeEEEEEcc-CCCEEEEEc
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-G------------------HTDGASCIDISA-DGTKLWTGG  264 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~------------------h~~~v~~~~~~~-~~~~l~s~~  264 (504)
                      ...+++|.+++++++++..++.|..||..+++...... .                  ....+.++++.+ ++ .|+.+.
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d   98 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVD   98 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEE
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEE
Confidence            34578899999878888889999999987764432110 0                  113578899997 55 455555


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeC-----------------CCcE
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGE-----------------ASNL  326 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i  326 (504)
                      ..+.|..+|..+++++.+...           ...........+++.+ +|+..++-..                 ++.|
T Consensus        99 ~~~~i~~~d~~~g~~~~~~~~-----------~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v  167 (322)
T 2fp8_A           99 CYYHLSVVGSEGGHATQLATS-----------VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL  167 (322)
T ss_dssp             TTTEEEEECTTCEECEEEESE-----------ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred             CCCCEEEEeCCCCEEEEeccc-----------CCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence            455688888876654332100           0001123467899999 9986666432                 3668


Q ss_pred             EEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCC
Q psy17188        327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  406 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  406 (504)
                      ..||..+++....   .........++++++++. ++++....+.|..|++...... ....+..  ... ...+++.++
T Consensus       168 ~~~d~~~~~~~~~---~~~~~~p~gia~~~dg~~-lyv~d~~~~~I~~~~~~~~~~~-~~~~~~~--~~g-P~gi~~d~~  239 (322)
T 2fp8_A          168 IKYDPSTKETTLL---LKELHVPGGAEVSADSSF-VLVAEFLSHQIVKYWLEGPKKG-TAEVLVK--IPN-PGNIKRNAD  239 (322)
T ss_dssp             EEEETTTTEEEEE---EEEESCCCEEEECTTSSE-EEEEEGGGTEEEEEESSSTTTT-CEEEEEE--CSS-EEEEEECTT
T ss_pred             EEEeCCCCEEEEe---ccCCccCcceEECCCCCE-EEEEeCCCCeEEEEECCCCcCC-ccceEEe--CCC-CCCeEECCC
Confidence            8888765532211   111224567999999875 4455556789999998753211 1111111  122 678999999


Q ss_pred             CCEEEEeeC----------CCcEEEeeCCCCCcceeecccCC--CCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        407 GRTLIVGGE----------ASNLSIWDLASPTPRIKAELTSS--APACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       407 g~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      |++.++...          .+.|..+|.. ++..........  ...++.+++ .+++++++...++.|.++++..
T Consensus       240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             SCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             CCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence            986666544          4568888864 443333333221  234556666 3566666666678888888753

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.07  E-value=1.6e-07  Score=82.58  Aligned_cols=231  Identities=10%  Similarity=0.034  Sum_probs=138.9

Q ss_pred             CcEEEEecCCeEEEEeCCCCCCCCc--eeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeec
Q psy17188        125 TKYVYTGGKGCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTS  201 (504)
Q Consensus       125 ~~~l~~~~d~~i~vw~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~  201 (504)
                      |.+|..+..+.|+.++++.......  ...+.  .....+..++|+++++.|+.+ ..++.|..+++.....  ......
T Consensus         1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~--~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~   76 (267)
T 1npe_A            1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLH--IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQ   76 (267)
T ss_dssp             CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEE--EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECT
T ss_pred             CcEEEEEcCCeEEEEEecCcccccccceeeec--CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEEC
Confidence            3456665656889999876432210  11111  112457899999976666655 4567899999876542  222222


Q ss_pred             CcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCCC
Q psy17188        202 SAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLREG  277 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~  277 (504)
                      .......+++.+++..|+.+ ...+.|.+++++.................++++|++..|+.+..   .+.|..++++..
T Consensus        77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~  156 (267)
T 1npe_A           77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (267)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence            22457899999976555544 45678999998754322222222356789999997666555543   368888887654


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                      .....               ..........+++++++..|+++. ..+.|.++|........  .... ......++.. 
T Consensus       157 ~~~~~---------------~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~--~~~~-~~~P~gi~~d-  217 (267)
T 1npe_A          157 NRRIL---------------AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK--VLEG-LQYPFAVTSY-  217 (267)
T ss_dssp             CCEEE---------------ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE--EEEC-CCSEEEEEEE-
T ss_pred             CcEEE---------------EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE--EecC-CCCceEEEEe-
Confidence            32211               011224578999999877766554 55789999987542211  1121 2234556543 


Q ss_pred             CCCCceeeeccCCCeEEEEecCCC
Q psy17188        357 DSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       357 ~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                       +.. ++++....+.|..+|..++
T Consensus       218 -~~~-lyva~~~~~~v~~~d~~~g  239 (267)
T 1npe_A          218 -GKN-LYYTDWKTNSVIAMDLAIS  239 (267)
T ss_dssp             -TTE-EEEEETTTTEEEEEETTTT
T ss_pred             -CCE-EEEEECCCCeEEEEeCCCC
Confidence             333 6666667788999998754

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.07  E-value=1.5e-08  Score=101.34  Aligned_cols=277  Identities=16%  Similarity=0.117  Sum_probs=154.1

Q ss_pred             EEEECC-CCCEEEEEeCCC-----------cEEEEECCCCeEEE--eec-CCCCCeEEEEEccCCCEEEEEcC-CCeEEE
Q psy17188        208 ALAISP-DSKVCFSCCSDG-----------NIAVWDLHNQTLVR--QFQ-GHTDGASCIDISADGTKLWTGGL-DNTVRS  271 (504)
Q Consensus       208 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~  271 (504)
                      ..++.+ ++++++.|+.+.           .+.+||..+++...  .+. .+.....++++..++++++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556677 888888887543           58899998875322  221 13334445778889999999984 458999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CC-----CcEEEEeCCCCCccceeee--c
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EA-----SNLSIWDLASPTPRIKAEL--T  343 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~v~d~~~~~~~~~~~~--~  343 (504)
                      ||+.+++....   .           .......-.+++..++++.++.|+ .+     ..+.+||..+.+.......  .
T Consensus       270 yd~~t~~W~~~---~-----------~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~  335 (656)
T 1k3i_A          270 YDSSSDSWIPG---P-----------DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN  335 (656)
T ss_dssp             EEGGGTEEEEC---C-----------CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred             ecCcCCceeEC---C-----------CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence            99988764321   1           111112224556677899999988 34     4699999987654332100  0


Q ss_pred             cCCCceeeEEECCCCCCceeeeccC---------CCeEEEEecCCCCCCCccccccc----ccCCCceEEEEEc-CCCCE
Q psy17188        344 SSAPACYALAISPDSKSPFFSSHHY---------KSCVKVWDISQPGSKTPVSQLDC----LQRDNYIRSVKLL-PDGRT  409 (504)
Q Consensus       344 ~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~~~~~~~~~~~~~----~~~~~~i~~~~~s-~~g~~  409 (504)
                      .....-....+..++.  +++.++.         ...+..||.....-.........    ......-.++.+. .++++
T Consensus       336 p~~~~~~~~~~~~~~~--iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i  413 (656)
T 1k3i_A          336 PMLTADKQGLYRSDNH--AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI  413 (656)
T ss_dssp             GGCCCCTTGGGTTTCS--CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE
T ss_pred             ccccccccceeecCCc--eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE
Confidence            0000000011122232  3333333         34567888765432111111100    0001112344443 37788


Q ss_pred             EEEeeCCC-----------cEEEeeCCCCCcceee--cccCCCCceeEEEECCCCCEEEEeeCC-----------CcEEE
Q psy17188        410 LIVGGEAS-----------NLSIWDLASPTPRIKA--ELTSSAPACYALAISPDSKVCFSCCSD-----------GNIAV  465 (504)
Q Consensus       410 l~~~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~~v~~l~~s~~~~~l~s~~~d-----------g~i~i  465 (504)
                      +++|+.++           .|.+||..+.......  .+.. ...-.+++..|++++++.|+.+           ..+.+
T Consensus       414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~  492 (656)
T 1k3i_A          414 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEI  492 (656)
T ss_dssp             EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS-CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEE
T ss_pred             EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC-CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEE
Confidence            88887543           5788888765543332  2221 1112344677899999999864           46899


Q ss_pred             EEcCCcceEE--EEeecCCceEEEEEccCCCEEEEecC
Q psy17188        466 WDLHNQTLVR--QFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       466 wd~~~~~~~~--~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      ||..+.+-..  .+...........+.+|++.++.||.
T Consensus       493 ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          493 YVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             EcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            9987765322  11111222334556799999999985

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.07  E-value=9.1e-08  Score=86.76  Aligned_cols=242  Identities=9%  Similarity=0.009  Sum_probs=142.8

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee-----------------cCcCceEEEEECC-CCCEEEEE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------------SSAPACYALAISP-DSKVCFSC  221 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~v~~~~~s~-~~~~l~~~  221 (504)
                      ....+++|.++++++.++..++.|..|+..+++........                 ........+++.+ +++ |+.+
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence            34567889999987888888899999988754422111000                 0113478899997 554 5555


Q ss_pred             eCCCcEEEEECCCCeEEEee---cC-CCCCeEEEEEcc-CCCEEEEEcC-----------------CCeEEEEECCCCce
Q psy17188        222 CSDGNIAVWDLHNQTLVRQF---QG-HTDGASCIDISA-DGTKLWTGGL-----------------DNTVRSWDLREGCV  279 (504)
Q Consensus       222 ~~dg~i~iwd~~~~~~~~~~---~~-h~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~~wd~~~~~~  279 (504)
                      ...+.|..+|..+++.....   .+ .......+++.+ +|++.++-..                 ++.|..+|..++++
T Consensus        98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~  177 (322)
T 2fp8_A           98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET  177 (322)
T ss_dssp             ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred             ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence            55556888887765422111   11 123468899999 8976666432                 36788888877764


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      ..+.                ........++++++++.|+++ ...+.|.+|++..........+..... ...+++.+++
T Consensus       178 ~~~~----------------~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G  240 (322)
T 2fp8_A          178 TLLL----------------KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG  240 (322)
T ss_dssp             EEEE----------------EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS
T ss_pred             EEec----------------cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC
Confidence            3211                111335679999999977666 556889999987532111111111222 7788999998


Q ss_pred             CCceeeeccC----------CCeEEEEecCCCCCCCccccccccc--CCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        359 KSPFFSSHHY----------KSCVKVWDISQPGSKTPVSQLDCLQ--RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       359 ~~~~~~~~~~----------~~~i~i~d~~~~~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      .  ++++...          .+.|..+|... .   .+..+....  ....+..+++ .+++++++...++.|..+++..
T Consensus       241 ~--l~va~~~~~~~~~~~~~~~~v~~~d~~G-~---~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          241 H--FWVSSSEELDGNMHGRVDPKGIKFDEFG-N---ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             C--EEEEEEEETTSSTTSCEEEEEEEECTTS-C---EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             C--EEEEecCcccccccCCCccEEEEECCCC-C---EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence            6  4444433          45677776531 1   111111111  0233556666 4566555555677888888763

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.04  E-value=8.4e-08  Score=82.55  Aligned_cols=217  Identities=10%  Similarity=0.078  Sum_probs=135.5

Q ss_pred             ccceeeecCCCc--EEEEEEcCCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-
Q psy17188        104 ARQINTLSHGEV--VCAVTISNPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-  177 (504)
Q Consensus       104 ~~~~~~~~h~~~--V~~v~~s~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-  177 (504)
                      .+.+.++.|...  ...++|++++++.++.+   ++.|.++|+.+++...   .+.. +.......+++.  ++.|..+ 
T Consensus         9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~---~i~l-~~~~fgeGi~~~--g~~lyv~t   82 (266)
T 2iwa_A            9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVEN---IHKM-DDSYFGEGLTLL--NEKLYQVV   82 (266)
T ss_dssp             EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEE---EEEC-CTTCCEEEEEEE--TTEEEEEE
T ss_pred             ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEE---EEec-CCCcceEEEEEe--CCEEEEEE
Confidence            455667777754  57999999887777654   5899999999864333   2222 112222345554  4455544 


Q ss_pred             cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEE
Q psy17188        178 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCID  252 (504)
Q Consensus       178 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~  252 (504)
                      -.++.+.++|..+.+........ ...   ...+++|++.|+++..++.|.++|.++.+.+..+.-..     ..+..+.
T Consensus        83 ~~~~~v~viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele  158 (266)
T 2iwa_A           83 WLKNIGFIYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE  158 (266)
T ss_dssp             TTCSEEEEEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred             ecCCEEEEEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence            46789999999876543332222 111   13345578777777778899999999988888776321     2367788


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCceEEE-eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE-EeCCCcEEEEe
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGCVKVW-DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWD  330 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d  330 (504)
                      |. ++...+....++.|.+.|+.++++.-+ +......  . ..............++|+|+++.+++ +...+.+.+.+
T Consensus       159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~--~-~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~  234 (266)
T 2iwa_A          159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRK--K-LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK  234 (266)
T ss_dssp             EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHH--H-HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred             EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccc--c-cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence            88 675556666688999999999986321 1100000  0 00000011245689999999876555 45667788887


Q ss_pred             CCCC
Q psy17188        331 LASP  334 (504)
Q Consensus       331 ~~~~  334 (504)
                      +...
T Consensus       235 l~~~  238 (266)
T 2iwa_A          235 LHLV  238 (266)
T ss_dssp             EEEC
T ss_pred             Eecc
Confidence            7543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.04  E-value=1.3e-07  Score=81.40  Aligned_cols=200  Identities=9%  Similarity=0.031  Sum_probs=133.5

Q ss_pred             ceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeE
Q psy17188        161 YIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTL  237 (504)
Q Consensus       161 ~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~  237 (504)
                      ....+.|++++.+.++.+.  ++.|.++|+.+++......+..+. ....+++.  ++.|+ +.-.++.+.++|..+.+.
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v   98 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN   98 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence            4679999998754454443  578999999988754443333322 22345554  44444 444678999999999999


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc---cCCceEEEEEcCCC
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ---RDNYIRSVKLLPDG  314 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~  314 (504)
                      +.++......  ...+++|++.++.+..++.|.++|..+.+...             .+....   .-..+..+.|. ++
T Consensus        99 ~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~-------------~I~Vg~~~~p~~~~nele~~-dg  162 (266)
T 2iwa_A           99 IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIK-------------KHNVKYNGHRVIRLNELEYI-NG  162 (266)
T ss_dssp             EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEE-------------EEECEETTEECCCEEEEEEE-TT
T ss_pred             EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEE-------------EEEECCCCcccccceeEEEE-CC
Confidence            9988633111  23456678877777778999999998876421             111111   11235677777 67


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCccceeeecc-----------CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPRIKAELTS-----------SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      +..+....++.|.+.|..+++......+.+           .......++++|+++. +++++...+.+...++...
T Consensus       163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~-lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR-IFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE-EEEEETTCSEEEEEEEEEC
T ss_pred             EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCE-EEEECCCCCeEEEEEEecc
Confidence            544444467899999999986554444431           1135689999999886 7888888888888887654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.00  E-value=3.8e-08  Score=98.22  Aligned_cols=274  Identities=12%  Similarity=0.141  Sum_probs=156.4

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECC--CCCEEEEEeC------CCcEEEEECCCCeEEEeec
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP--DSKVCFSCCS------DGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~  242 (504)
                      +..+++++.|+.|..+|..+++............ ...+..+|  .+..++++..      ++.|..+|.++|+.+..+.
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  195 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK-PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS-SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC-cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence            5678888889999999999988655444321110 00011111  1234555543      5889999999999988775


Q ss_pred             CCC---C----------------------------CeEEEEEccCCCEEEEEcCCC-------------------eEEEE
Q psy17188        243 GHT---D----------------------------GASCIDISADGTKLWTGGLDN-------------------TVRSW  272 (504)
Q Consensus       243 ~h~---~----------------------------~v~~~~~~~~~~~l~s~~~dg-------------------~i~~w  272 (504)
                      ...   .                            ....+++.++..+++.++.++                   .|..+
T Consensus       196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al  275 (668)
T 1kv9_A          196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI  275 (668)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence            210   0                            112467888888888888776                   39999


Q ss_pred             ECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeecc-----
Q psy17188        273 DLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELTS-----  344 (504)
Q Consensus       273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----  344 (504)
                      |.++|+. +|..........     ......+.....+..+|+   .+++++.+|.++++|..+++......+..     
T Consensus       276 D~~tG~~-~W~~~~~~~~~w-----d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~  349 (668)
T 1kv9_A          276 RPDTGKL-AWHYQVTPGDSW-----DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE  349 (668)
T ss_dssp             CTTTCCE-EEEEESSTTCCS-----CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred             cCCCCce-eeEeecCCCccc-----cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc
Confidence            9999985 454432211000     000112222222333564   68888999999999999886542211110     


Q ss_pred             ----C-CCc------------------------eeeEEECCCCCCceee-------------------------------
Q psy17188        345 ----S-APA------------------------CYALAISPDSKSPFFS-------------------------------  364 (504)
Q Consensus       345 ----~-~~~------------------------i~~~~~~~~~~~~~~~-------------------------------  364 (504)
                          . ..+                        -..++++|+....++-                               
T Consensus       350 ~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  429 (668)
T 1kv9_A          350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT  429 (668)
T ss_dssp             EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred             ccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccC
Confidence                0 000                        0124555554431110                               


Q ss_pred             ---eccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCc
Q psy17188        365 ---SHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  441 (504)
Q Consensus       365 ---~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  441 (504)
                         ....++.|..||..+++..-....      ........+...+.++++++.|+.++.||.++++.+.......... 
T Consensus       430 ~~p~~~~~g~l~A~D~~tG~~~W~~~~------~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~-  502 (668)
T 1kv9_A          430 DVPAAVVSGALLAWDPVKQKAAWKVPY------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIV-  502 (668)
T ss_dssp             CCCGGGCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-
T ss_pred             CCCCCCccceEEEEeCCCCcEEEEccC------CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcc-
Confidence               122347899999877643222111      1122233444567789999999999999999998877666543211 


Q ss_pred             eeEEEECCCCC-EEEEee
Q psy17188        442 CYALAISPDSK-VCFSCC  458 (504)
Q Consensus       442 v~~l~~s~~~~-~l~s~~  458 (504)
                      ..-+.+..+|+ +++.++
T Consensus       503 ~~p~~~~~~G~~yva~~~  520 (668)
T 1kv9_A          503 AAPMTFELAGRQYVAIMA  520 (668)
T ss_dssp             SCCEEEEETTEEEEEEEE
T ss_pred             cCceEEEECCEEEEEEEe
Confidence            12234445666 555444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.00  E-value=1.6e-07  Score=93.93  Aligned_cols=281  Identities=13%  Similarity=0.135  Sum_probs=155.4

Q ss_pred             EEEEcc-CCCEEEEecCCC-----------cEEEEeCCCCCccceeeeec-CcCceEEEEECCCCCEEEEEeC-CCcEEE
Q psy17188        164 SVKLLP-DGRTLIVGGEAS-----------NLSIWDLASPTPRIKAELTS-SAPACYALAISPDSKVCFSCCS-DGNIAV  229 (504)
Q Consensus       164 ~~~~s~-~~~~l~~~~~dg-----------~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-dg~i~i  229 (504)
                      ++++.+ +++.++.|+.+.           .+.+||..+++......+.. +.....++++..++++++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            667777 888888887543           58899999887655444432 2233445778889999999884 458999


Q ss_pred             EECCCCeEEEeecCCCC-CeEEEEEccCCCEEEEEc-CC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        230 WDLHNQTLVRQFQGHTD-GASCIDISADGTKLWTGG-LD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       230 wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      ||..+.+-...-..+.. .-.+++..+++++++.|+ .+     ..+.+||+.+++.....   .....+   .....+.
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~---~~~~~p---~~~~~~~  343 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLP---NAKVNP---MLTADKQ  343 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEET---TSCSGG---GCCCCTT
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCC---Cccccc---ccccccc
Confidence            99988765433222222 123455667899999988 44     57999999987744321   000000   0000000


Q ss_pred             CceEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCCccceeeeccC-------CCceeeEEECC-CCCCceeee
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEA---------SNLSIWDLASPTPRIKAELTSS-------APACYALAISP-DSKSPFFSS  365 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~-------~~~i~~~~~~~-~~~~~~~~~  365 (504)
                           ..+..++..++.++.+         ..+..||..+............       ...-..+.+.. +++  +++.
T Consensus       344 -----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~--i~v~  416 (656)
T 1k3i_A          344 -----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK--ILTF  416 (656)
T ss_dssp             -----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE--EEEE
T ss_pred             -----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCe--EEEE
Confidence                 0112234444444333         4577888877643221111110       01122333323 333  6666


Q ss_pred             ccCCC-----------eEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----------CcEEEee
Q psy17188        366 HHYKS-----------CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----------SNLSIWD  423 (504)
Q Consensus       366 ~~~~~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----------g~i~iwd  423 (504)
                      |+.++           .+.+||.....-....  .........-.+++..|+++++++|+.+           ..+.+||
T Consensus       417 GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd  494 (656)
T 1k3i_A          417 GGSPDYQDSDATTNAHIITLGEPGTSPNTVFA--SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV  494 (656)
T ss_dssp             CCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC--TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred             eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc--cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence            65432           5667776543211000  0011112222366778899999999854           4589999


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                      ..+.+..................+.+|++.++.|+.
T Consensus       495 p~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          495 PEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             GGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            876543332222222222234466799999999885

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.92  E-value=3.2e-07  Score=77.90  Aligned_cols=202  Identities=10%  Similarity=0.073  Sum_probs=126.9

Q ss_pred             cceeeecCCCc--EEEEEEcCCCcEEEEec-CC--eEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-c
Q psy17188        105 RQINTLSHGEV--VCAVTISNPTKYVYTGG-KG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-G  178 (504)
Q Consensus       105 ~~~~~~~h~~~--V~~v~~s~~~~~l~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~  178 (504)
                      +.+.++.|+..  ...+.|+ ++.+..+.+ +|  .|+++|+++++....+   ..   ..........++++.|... -
T Consensus        32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~---~l---~~~~FgeGit~~g~~ly~ltw  104 (262)
T 3nol_A           32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI---EL---GKRYFGEGISDWKDKIVGLTW  104 (262)
T ss_dssp             EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE---EC---CTTCCEEEEEEETTEEEEEES
T ss_pred             EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE---ec---CCccceeEEEEeCCEEEEEEe
Confidence            44556666544  4788898 666666666 55  8999999987443322   22   2233333333345555554 3


Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEE
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDI  253 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~  253 (504)
                      .++.+.+||.++.+........++.   ..++  +|++.|+.+..++.|.++|..+.+.+.++.-..     ..++.+.|
T Consensus       105 ~~~~v~v~D~~t~~~~~ti~~~~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~  179 (262)
T 3nol_A          105 KNGLGFVWNIRNLRQVRSFNYDGEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW  179 (262)
T ss_dssp             SSSEEEEEETTTCCEEEEEECSSCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred             eCCEEEEEECccCcEEEEEECCCCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence            5889999999987754444333321   2333  467777777667889999999998888765421     33456777


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      . +|+..+..-.+..|.+.|.+++++.- ++...-....   . .........+.++++|+++.|++.+..
T Consensus       180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~---~-~~~~~~~vlNGIA~dp~~~~lfVTGK~  245 (262)
T 3nol_A          180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEA---G-PLPSPIDVLNGIAWDKEHHRLFVTGKL  245 (262)
T ss_dssp             E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGS---C-SCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred             E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccc---c-cccCcCCceEEEEEcCCCCEEEEECCC
Confidence            6 67666666678899999999998643 2221100000   0 011223457899999998888777653

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.91  E-value=2.2e-07  Score=90.64  Aligned_cols=278  Identities=11%  Similarity=0.057  Sum_probs=153.9

Q ss_pred             EEEccCCCE----EEEecCCCcEEEEeCCCCCccceeeeecCcC--ceEE-EEECCCCCEEEEEe------CCCcEEEEE
Q psy17188        165 VKLLPDGRT----LIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACYA-LAISPDSKVCFSCC------SDGNIAVWD  231 (504)
Q Consensus       165 ~~~s~~~~~----l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~~-~~~s~~~~~l~~~~------~dg~i~iwd  231 (504)
                      ++++|.+..    |++++.|+.|..+|..+++......+..+..  .+.+ .... ++ .+++++      .++.|+.+|
T Consensus       111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D  188 (599)
T 1w6s_A          111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYD  188 (599)
T ss_dssp             CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEE
T ss_pred             eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEE
Confidence            455444444    8888889999999999888655544433210  1111 1111 44 455554      378999999


Q ss_pred             CCCCeEEEeecCCCCC-------------------------------------e-EEEEEccCCCEEEEEcCC-------
Q psy17188        232 LHNQTLVRQFQGHTDG-------------------------------------A-SCIDISADGTKLWTGGLD-------  266 (504)
Q Consensus       232 ~~~~~~~~~~~~h~~~-------------------------------------v-~~~~~~~~~~~l~s~~~d-------  266 (504)
                      .++|+.+.++......                                     + ..+++.++..+++.+..+       
T Consensus       189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~  268 (599)
T 1w6s_A          189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET  268 (599)
T ss_dssp             TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred             CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence            9999998876532211                                     0 134566667777777655       


Q ss_pred             ---------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCC---CEEEEEeCCCcEEEEeCCC
Q psy17188        267 ---------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDG---RTLIVGGEASNLSIWDLAS  333 (504)
Q Consensus       267 ---------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~v~d~~~  333 (504)
                               +.|..+|.++|+.+ |..+.......    .......++ -+... .+|   ..++.++.+|.++++|.++
T Consensus       269 ~r~gd~~y~~sv~Ald~~TG~~~-W~~q~~~~d~w----d~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t  342 (599)
T 1w6s_A          269 MRPGDNKWTMTIFGRDADTGEAK-FGYQKTPHDEW----DYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTD  342 (599)
T ss_dssp             GSCSCCTTSSEEEEEETTTCCEE-EEEESSTTCSS----CCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred             ccCCCccccceEEEEeCCCCcee-eEeecCCCccc----cccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence                     38999999999863 54433211100    000001111 12222 466   4677788999999999988


Q ss_pred             CCccceeeecc-----------CCCce--------------------------eeEEECCCCCCceeee-----------
Q psy17188        334 PTPRIKAELTS-----------SAPAC--------------------------YALAISPDSKSPFFSS-----------  365 (504)
Q Consensus       334 ~~~~~~~~~~~-----------~~~~i--------------------------~~~~~~~~~~~~~~~~-----------  365 (504)
                      ++......+..           ...++                          ..++++|+.+..++.+           
T Consensus       343 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~  422 (599)
T 1w6s_A          343 GALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFM  422 (599)
T ss_dssp             CCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECC
T ss_pred             CCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccc
Confidence            86544333211           00000                          1344555444211100           


Q ss_pred             --------------------cc------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        366 --------------------HH------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       366 --------------------~~------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                                          .+      ..+.+..||+.+++..-....      ..+...-.+...+.+++.++.|+.+
T Consensus       423 ~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~------~~~~~~g~~~tagg~vf~gt~dg~l  496 (599)
T 1w6s_A          423 LPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME------RFAVWGGTMATAGDLVFYGTLDGYL  496 (599)
T ss_dssp             CCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE------SSCCCSBCEEETTTEEEEECTTSEE
T ss_pred             ccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC------CCCccCcceEecCCEEEEECCCCeE
Confidence                                01      346777888776543221111      0111111122356678889999999


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCE-EEEe
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSC  457 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~-l~s~  457 (504)
                      +.||.++++.+....+..... ..-+.+..+|+. +++.
T Consensus       497 ~A~D~~tG~~lW~~~l~~g~~-~~P~~y~~~G~qyv~~~  534 (599)
T 1w6s_A          497 KARDSDTGDLLWKFKIPSGAI-GYPMTYTHKGTQYVAIY  534 (599)
T ss_dssp             EEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEEEEEE
T ss_pred             EEEECCCCCEEEEeeCCCCcE-eccEEEEeCCEEEEEEE
Confidence            999999999887776543221 122455567764 4443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.90  E-value=7.6e-08  Score=81.62  Aligned_cols=184  Identities=10%  Similarity=0.118  Sum_probs=124.4

Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS  382 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~  382 (504)
                      .....+.|+ ++.+..+.+.+|.|+++|+++++..... +..   ......+.++++. ++...-.++.+.+||..+.+.
T Consensus        55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---~~FgeGit~~g~~-Ly~ltw~~~~v~V~D~~Tl~~  128 (268)
T 3nok_A           55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG---NIFAEGLASDGER-LYQLTWTEGLLFTWSGMPPQR  128 (268)
T ss_dssp             CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT---TCCEEEEEECSSC-EEEEESSSCEEEEEETTTTEE
T ss_pred             cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC---CcceeEEEEeCCE-EEEEEccCCEEEEEECCcCcE
Confidence            345788887 3566667778889999999998765555 333   3333333344554 555666799999999886543


Q ss_pred             CCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCC---ceeEEEECCCCCEEEEeeC
Q psy17188        383 KTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       383 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s~~~~~l~s~~~  459 (504)
                      ...+..   ...     ...+++|++.|+.+..++.|.++|..+.+............   .++.+.|. +|+..+..-.
T Consensus       129 ~~ti~~---~~e-----GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~  199 (268)
T 3nok_A          129 ERTTRY---SGE-----GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH  199 (268)
T ss_dssp             EEEEEC---SSC-----CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred             EEEEeC---CCc-----eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence            333221   111     12333578888888778899999999887666555543332   34667777 7766655556


Q ss_pred             CCcEEEEEcCCcceEEEEeec-------------CCceEEEEEccCCCEEEEecC
Q psy17188        460 DGNIAVWDLHNQTLVRQFQGH-------------TDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       460 dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      +..|.+.|.++++.+..+...             .+..+.|+|+|+++.|+..|.
T Consensus       200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            789999999999999888732             135689999998777666553

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.90  E-value=5.4e-07  Score=88.03  Aligned_cols=271  Identities=11%  Similarity=0.094  Sum_probs=152.6

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--ceEE-EEECCCCCEEEEEeC------CCcEEEEECCCCeEEEe
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACYA-LAISPDSKVCFSCCS------DGNIAVWDLHNQTLVRQ  240 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~  240 (504)
                      ++..+++++.|+.|..+|..+++......+..+..  .+.+ .... ++ .+++++.      ++.|..+|.++++.+.+
T Consensus       114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~  191 (571)
T 2ad6_A          114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWR  191 (571)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence            35678888889999999999888665544433211  1111 1111 44 5555554      78999999999999887


Q ss_pred             ecCCCCC--------------------------------------eEEEEEccCCCEEEEEcCC----------------
Q psy17188        241 FQGHTDG--------------------------------------ASCIDISADGTKLWTGGLD----------------  266 (504)
Q Consensus       241 ~~~h~~~--------------------------------------v~~~~~~~~~~~l~s~~~d----------------  266 (504)
                      +......                                      ...+++.++...++.+..+                
T Consensus       192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~  271 (571)
T 2ad6_A          192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT  271 (571)
T ss_dssp             EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred             EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence            6532110                                      0135566766667666532                


Q ss_pred             CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCccceeeec
Q psy17188        267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR---TLIVGGEASNLSIWDLASPTPRIKAELT  343 (504)
Q Consensus       267 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~  343 (504)
                      +.|..+|.++|+. +|..+.......    .......++ -+....+|+   .++.++.+|.++++|.++++......+.
T Consensus       272 ~~v~Ald~~tG~~-~W~~~~~~~d~~----d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~  345 (571)
T 2ad6_A          272 MTIWGRDLDTGMA-KWGYQKTPHDEW----DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD  345 (571)
T ss_dssp             TEEEEEETTTCCE-EEEEESSTTCSS----CCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred             EEEEEEecCCCcE-EEEecCCCCccc----ccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence            3699999999985 465443211000    000011111 122224674   5677888999999999888654433322


Q ss_pred             cC-----------CCce--------------------------eeEEECCCCCCceeeec--------------------
Q psy17188        344 SS-----------APAC--------------------------YALAISPDSKSPFFSSH--------------------  366 (504)
Q Consensus       344 ~~-----------~~~i--------------------------~~~~~~~~~~~~~~~~~--------------------  366 (504)
                      ..           ..++                          ..++++|+...+++.+.                    
T Consensus       346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~  425 (571)
T 2ad6_A          346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV  425 (571)
T ss_dssp             TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred             CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence            10           0011                          23456666553222211                    


Q ss_pred             ---------------cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        367 ---------------HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       367 ---------------~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                                     ..++.+..||..+++..-....      ...+....+...+..+++++.||.|+.||.++++.+.
T Consensus       426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~------~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw  499 (571)
T 2ad6_A          426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE------KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW  499 (571)
T ss_dssp             CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE------SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             cccceeccCccccCCCCCCeEEEEECCCCCEEEEecC------CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence                           1357888888876543222111      1111122223345678889999999999999998877


Q ss_pred             eecccCCCCceeEEEECCCCCEEE
Q psy17188        432 KAELTSSAPACYALAISPDSKVCF  455 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~  455 (504)
                      ......... ..-+.+..+++.++
T Consensus       500 ~~~~~~~~~-~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          500 NFKMPSGGI-GSPMTYSFKGKQYI  522 (571)
T ss_dssp             EEECSSCCC-SCCEEEEETTEEEE
T ss_pred             EEeCCCCcE-eeeEEEEECCEEEE
Confidence            766543221 12234556776544

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.87  E-value=9.4e-05  Score=72.80  Aligned_cols=369  Identities=9%  Similarity=0.013  Sum_probs=193.3

Q ss_pred             CcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCc-EEEEec--CCeEEEEeCCCCCCC
Q psy17188         72 KPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTK-YVYTGG--KGCVKVWDISQPGSK  147 (504)
Q Consensus        72 ~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~~~~--d~~i~vw~~~~~~~~  147 (504)
                      ..+..+++.+.+ ++.......+.+.................-.....|++.|.+. +..+--  .+.|...+++... .
T Consensus        84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~  162 (619)
T 3s94_A           84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-R  162 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-C
T ss_pred             CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-e
Confidence            455666666533 3444343444444433333222211113344567889988644 444432  4567767765421 1


Q ss_pred             CceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        148 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       148 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      ..+.  .  ..-...+.++++++++.|..+ ...+.|...+++........  .+.......+++..+ .+.++-..++.
T Consensus       163 ~~l~--~--~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~--~~~~~~P~gi~~~~~-~ly~td~~~~~  235 (619)
T 3s94_A          163 FIII--N--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFED-ILYWTDWSTHS  235 (619)
T ss_dssp             EEEE--C--SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCS
T ss_pred             EEEE--e--CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE--eCCCCCceEEEEeCC-EEEEecCCCCE
Confidence            1111  1  234567899999977766665 45677999988754332221  111122346677655 34444446778


Q ss_pred             EEEEECCCCeEEEeecCCCCCeEE-------------------------EEE-----------ccCCC------------
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASC-------------------------IDI-----------SADGT------------  258 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~-------------------------~~~-----------~~~~~------------  258 (504)
                      |...|..+++....+.........                         +++           .|.|-            
T Consensus       236 V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~  315 (619)
T 3s94_A          236 ILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG  315 (619)
T ss_dssp             EEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSS
T ss_pred             EEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCC
Confidence            999998777544333211111111                         111           11110            


Q ss_pred             ---EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCC
Q psy17188        259 ---KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASP  334 (504)
Q Consensus       259 ---~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~  334 (504)
                         +|+.+ ..+.|+..++....          ...   .......-..+..++|++.+..|+.+ ...+.|+.++....
T Consensus       316 ~~~~Ll~~-~~~~i~~i~l~~~~----------~~~---~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~  381 (619)
T 3s94_A          316 ATELLLLA-RRTDLRRISLDTPD----------FTD---IVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS  381 (619)
T ss_dssp             CSEEEEEE-ESSCEEEEESSSTT----------CCC---EECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CceEEEEE-cccceEEEecCCCc----------cce---eEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC
Confidence               11111 11222323332221          000   00011122347789999866666555 45678988888764


Q ss_pred             CccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        335 TPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       335 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      ...  ............+++.+.++. ++.+-...+.|.+.++..... ..+.    ...-.....+++.|...+|+...
T Consensus       382 ~~~--~v~~~~~~~p~GlAvD~~~~~-lY~tD~~~~~I~v~~~~G~~~-~~l~----~~~l~~P~~iavdp~~G~ly~tD  453 (619)
T 3s94_A          382 GSQ--FVVTAQIAHPDGIAVDWVARN-LYWTDTGTDRIEVTRLNGTMR-KILI----SEDLEEPRAIVLDPMVGYMYWTD  453 (619)
T ss_dssp             SCE--EEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSCSC-EEEE----CTTCCSEEEEEEETTTTEEEEEE
T ss_pred             ccE--EEEECCCCCcCceEEecccCc-EEEEeCCCCcEEEEeCCCCeE-EEEE----ECCCCCeeeEEEEcCCCcEEEec
Confidence            322  222223346778898876554 666777788999998875321 1111    12334577999999755565554


Q ss_pred             C--CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC-CCcEEEEEcCCcc
Q psy17188        415 E--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWDLHNQT  472 (504)
Q Consensus       415 ~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~  472 (504)
                      .  ...|...+++.......  ........+.|+++++++.|..+.. .+.|..+++....
T Consensus       454 ~g~~~~I~r~~~dG~~~~~l--~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~  512 (619)
T 3s94_A          454 WGEIPKIERAALDGSDRVVL--VNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG  512 (619)
T ss_dssp             CSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred             CCCCCEEEEEccCCCccEEE--EeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence            3  35677777654332222  2223455788999997777776654 5678888886443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.82  E-value=1.8e-06  Score=73.26  Aligned_cols=204  Identities=11%  Similarity=0.079  Sum_probs=126.1

Q ss_pred             cccceeeecCCCc--EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        103 HARQINTLSHGEV--VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       103 ~~~~~~~~~h~~~--V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      ..+.+.++.|+..  ...+.|+. +.+..+.+ +|.|+++|+++++....+  +   ...-.-..+++.. ++..+..-.
T Consensus        42 ~~~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l---~~~~FgeGit~~g-~~Ly~ltw~  114 (268)
T 3nok_A           42 VAHIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--R---LGNIFAEGLASDG-ERLYQLTWT  114 (268)
T ss_dssp             EEEEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--E---CTTCCEEEEEECS-SCEEEEESS
T ss_pred             ceEEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--C---CCCcceeEEEEeC-CEEEEEEcc
Confidence            3455566666544  46888884 55555555 889999999997655444  2   2222223355542 233334446


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEEc
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDIS  254 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~~  254 (504)
                      ++.+.+||.++.+.........+   -..++  +|++.|+.+..++.|.++|.++.+.+.++.-..     ..++.+.|.
T Consensus       115 ~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~  189 (268)
T 3nok_A          115 EGLLFTWSGMPPQRERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA  189 (268)
T ss_dssp             SCEEEEEETTTTEEEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred             CCEEEEEECCcCcEEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence            88999999997765433333322   13344  467788877778899999999998888775422     245677777


Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  322 (504)
                       +|+..+....+..|.+.|.+++++.- +++..-....   ...........+.|+++|+++.|++.+.
T Consensus       190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~---~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAV---AGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHH---TTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccc---cccccCcCCceEEEEEcCCCCEEEEeCC
Confidence             67666666678899999999998642 2221000000   0001122346789999997766665544

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.81  E-value=1.8e-06  Score=87.63  Aligned_cols=155  Identities=8%  Similarity=-0.041  Sum_probs=96.9

Q ss_pred             cEEEEEEc-CCCcEEEEec--C----CeEEEEeCCCC-CCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC-----C
Q psy17188        115 VVCAVTIS-NPTKYVYTGG--K----GCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----S  181 (504)
Q Consensus       115 ~V~~v~~s-~~~~~l~~~~--d----~~i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g  181 (504)
                      .+...+|| |||++||.+.  +    ..|+++|++++ +....  .+     ......++|+||++.|+....+     .
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~-----~~~~~~~~WspDg~~l~y~~~d~~~~~~  247 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV-----SGTNGEIVWGPDHTSLFYVTKDETLREN  247 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE-----EEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc-----cCceeeEEEecCCCEEEEEEECCCCCCC
Confidence            68889999 9999988654  2    25999999886 42111  11     1123468999999988887654     3


Q ss_pred             cEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeC---CCcEEEEECCCC--eE--EEeecCCCCCeEEEEE
Q psy17188        182 NLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQ--TL--VRQFQGHTDGASCIDI  253 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~--~~--~~~~~~h~~~v~~~~~  253 (504)
                      .|+++++.+++......+. ........+.|+||+++|+..+.   ...|.++|+.++  +.  .............+.|
T Consensus       248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~  327 (751)
T 2xe4_A          248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM  327 (751)
T ss_dssp             EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred             EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence            5888888765432222222 22234567899999998887653   346888999875  23  3333334455566665


Q ss_pred             ccCCCEEEEEcCC----CeEEEEECCC
Q psy17188        254 SADGTKLWTGGLD----NTVRSWDLRE  276 (504)
Q Consensus       254 ~~~~~~l~s~~~d----g~i~~wd~~~  276 (504)
                      +.++.+++....+    ..|..+++.+
T Consensus       328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          328 HGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             ETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             eeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            5444344444433    2566666654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.78  E-value=1.9e-05  Score=71.02  Aligned_cols=236  Identities=9%  Similarity=0.047  Sum_probs=141.9

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCC----ceEEEeecCCCCCC
Q psy17188        217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREG----CVKVWDISQPGSKT  291 (504)
Q Consensus       217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~----~~~~~~~~~~~~~~  291 (504)
                      +|+.+. ...|+..|+.+.+....+. ....+..++|++++..| ++-..++.|..+++...    ...           
T Consensus         3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~-----------   69 (316)
T 1ijq_A            3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-----------   69 (316)
T ss_dssp             EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE-----------
T ss_pred             EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE-----------
Confidence            344443 3579999998876655554 44567899999865544 45556688999988762    111           


Q ss_pred             CcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC-C
Q psy17188        292 PVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY-K  369 (504)
Q Consensus       292 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~  369 (504)
                         .+ .......+..+++++.+..|+ +-...+.|.+++........  ...........+++.|.+.. ++++... .
T Consensus        70 ---~~-~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~P~~iavdp~~g~-ly~~d~~~~  142 (316)
T 1ijq_A           70 ---TV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT--LFRENGSKPRAIVVDPVHGF-MYWTDWGTP  142 (316)
T ss_dssp             ---EE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE--EEECTTCCEEEEEEETTTTE-EEEEECSSS
T ss_pred             ---EE-EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE--EEECCCCCcceEEeCCCCCE-EEEEccCCC
Confidence               00 111123457889987555554 44567889999987543221  22223346789999987775 3344333 3


Q ss_pred             CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEEC
Q psy17188        370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAIS  448 (504)
Q Consensus       370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  448 (504)
                      +.|..+++..... ..+.    ...-.....+++++++..|+.+. ..+.|..+|+....................+++.
T Consensus       143 ~~I~~~~~dG~~~-~~~~----~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~  217 (316)
T 1ijq_A          143 AKIKKGGLNGVDI-YSLV----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF  217 (316)
T ss_dssp             CEEEEEETTSCCE-EEEE----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred             CeEEEEcCCCCCe-EEEE----ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence            7788887753211 1110    11234567999999877776665 4568999998754333332222223345667775


Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188        449 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       449 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  478 (504)
                       .+.++++-...+.|..++..+++.+..+.
T Consensus       218 -~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          218 -EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             -TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             -CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence             34555555567889999987777666654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.78  E-value=1.1e-05  Score=78.92  Aligned_cols=272  Identities=12%  Similarity=0.091  Sum_probs=151.0

Q ss_pred             CCEEEEecCCCcEEEEeCCCCCccceeeeecCcC--ceE-E-EEEC--CCCC-EEEEEeC------CCcEEEEECCCCeE
Q psy17188        171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP--ACY-A-LAIS--PDSK-VCFSCCS------DGNIAVWDLHNQTL  237 (504)
Q Consensus       171 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~v~-~-~~~s--~~~~-~l~~~~~------dg~i~iwd~~~~~~  237 (504)
                      +..+++++.|+.|..+|.++++.........+..  .+. . +...  .+++ .+++++.      ++.|..+|.++|+.
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~  196 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE  196 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence            5677888889999999999988655544433210  011 0 1111  1233 5666543      78999999999998


Q ss_pred             EEeecCCCCCe-----------------------------------------EEEEEccCCCEEEEEcC-----------
Q psy17188        238 VRQFQGHTDGA-----------------------------------------SCIDISADGTKLWTGGL-----------  265 (504)
Q Consensus       238 ~~~~~~h~~~v-----------------------------------------~~~~~~~~~~~l~s~~~-----------  265 (504)
                      +.........+                                         ..+++.|+..+++.+..           
T Consensus       197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~  276 (582)
T 1flg_A          197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART  276 (582)
T ss_dssp             EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred             EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence            87654211000                                         12456666667776552           


Q ss_pred             ---------C----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCC---EEEEEeCCCcEEE
Q psy17188        266 ---------D----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGR---TLIVGGEASNLSI  328 (504)
Q Consensus       266 ---------d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~l~~~~~dg~i~v  328 (504)
                               |    +.|..+|.++|+.+ |..+......    ........++ -+... .+|+   .++.++.+|.+++
T Consensus       277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~-W~~q~~~~d~----wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~  350 (582)
T 1flg_A          277 AKGGNPHDYDSLYTSGQVGVDPSSGEVK-WFYQHTPNDA----WDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYV  350 (582)
T ss_dssp             CTTSCSTTCCCTTCSEEEEECTTTCCEE-EEEESSTTCC----SCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEE
T ss_pred             cCCCcccccCCcccceEEEEeCCCCCEE-EEEeCCCCCc----ccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEE
Confidence                     2    58999999999854 5543321100    0000001111 12222 4664   6788899999999


Q ss_pred             EeCCCCCccceeeeccCC-----------Cc--------------------------------eeeEEECCCCCCceeee
Q psy17188        329 WDLASPTPRIKAELTSSA-----------PA--------------------------------CYALAISPDSKSPFFSS  365 (504)
Q Consensus       329 ~d~~~~~~~~~~~~~~~~-----------~~--------------------------------i~~~~~~~~~~~~~~~~  365 (504)
                      +|.++++...........           .+                                -..++++|+....++..
T Consensus       351 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~  430 (582)
T 1flg_A          351 VDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA  430 (582)
T ss_dssp             EETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE
T ss_pred             EECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec
Confidence            999888654333322100           00                                01345555544322211


Q ss_pred             c-------------------------------cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        366 H-------------------------------HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       366 ~-------------------------------~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      .                               ...+.|..||+.+++..-....      ...+..-.....+.++++++
T Consensus       431 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~------~~~~~~g~~~tagglvf~g~  504 (582)
T 1flg_A          431 NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE------HLPLWAGVLATAGNLVFTGT  504 (582)
T ss_dssp             ECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE------SSCCCSCCEEETTTEEEEEC
T ss_pred             hhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecC------CCCCcccceEeCCCEEEEEC
Confidence            0                               1357788888877643222211      01111111222466788899


Q ss_pred             CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEE
Q psy17188        415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF  455 (504)
Q Consensus       415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~  455 (504)
                      .|+.++.||.++++.+.......... ..-+.+..+|+..+
T Consensus       505 ~dg~l~A~D~~tG~~lW~~~~~~g~~-a~P~~y~~~G~qYv  544 (582)
T 1flg_A          505 GDGYFKAFDAKSGKELWKFQTGSGIV-SPPITWEQDGEQYL  544 (582)
T ss_dssp             TTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEEE
T ss_pred             CCCcEEEEECCCCCEEEEecCCCCcc-cCceEEEECCEEEE
Confidence            99999999999999888776654321 12246666776433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.75  E-value=3.8e-05  Score=71.43  Aligned_cols=252  Identities=9%  Similarity=0.019  Sum_probs=148.8

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      +|+.+. ...|+..++........+. ....+..++|++.+..|+ +-...+.|+.+++......          ... .
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~----------~~~-~  151 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----------SSY-D  151 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------------CCC-E
T ss_pred             eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC----------Ccc-e
Confidence            444443 4678888988765544444 456788999998655554 4455678888887652100          000 1


Q ss_pred             ceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      ............+++.+.+..| ++-...+.|.+.++.....  .............+++.|.+..++++-.+..+.|..
T Consensus       152 ~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~  229 (400)
T 3p5b_L          152 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK  229 (400)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred             EEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEE
Confidence            1111123457889999854444 4555677899999876532  222233344678999999776534433334577888


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      .++.........     ...-.....+++++++..|+.+. ..+.|..+|+....................+++. .+.+
T Consensus       230 ~~~dG~~~~~~~-----~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~l  303 (400)
T 3p5b_L          230 GGLNGVDIYSLV-----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKV  303 (400)
T ss_dssp             EETTSCSCEEEE-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEE
T ss_pred             EeCCCCccEEEE-----ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEE
Confidence            887643221111     11234567999999887777765 4567999998765443333322223344566763 3344


Q ss_pred             EEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188        454 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI  489 (504)
Q Consensus       454 l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  489 (504)
                      +++-...+.|..++..+|+.+..+........++..
T Consensus       304 ywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v  339 (400)
T 3p5b_L          304 FWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  339 (400)
T ss_dssp             EEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred             EEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence            555566788999998888777766644444555543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.75  E-value=6.8e-07  Score=75.23  Aligned_cols=186  Identities=15%  Similarity=0.122  Sum_probs=122.1

Q ss_pred             CCceEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      ......+.|++ +.++.+.+.+  ..|+.+|+.+++......+..   ......+...++. ++...-.++.+.+||..+
T Consensus        20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---~~fgeGi~~~~~~-ly~ltw~~~~v~v~D~~t   94 (243)
T 3mbr_X           20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---PYFGAGIVAWRDR-LIQLTWRNHEGFVYDLAT   94 (243)
T ss_dssp             TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---TCCEEEEEEETTE-EEEEESSSSEEEEEETTT
T ss_pred             ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---CcceeEEEEeCCE-EEEEEeeCCEEEEEECCc
Confidence            45567899986 4555555554  389999999986555444443   2222333333444 556667789999999876


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCC---CceeEEEECCCCCEEEE
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA---PACYALAISPDSKVCFS  456 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~s~~~~~l~s  456 (504)
                      ......+.   ...   .  ...+.++++.|+++..++.|.++|..+.+.........+.   ..++.+.+. +|+..+.
T Consensus        95 l~~~~ti~---~~~---~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyan  165 (243)
T 3mbr_X           95 LTPRARFR---YPG---E--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLAN  165 (243)
T ss_dssp             TEEEEEEE---CSS---C--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred             CcEEEEEe---CCC---C--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEE
Confidence            54333222   111   1  2233456777777777889999999988766655554332   234566665 6665555


Q ss_pred             eeCCCcEEEEEcCCcceEEEEeec-------------CCceEEEEEccCCCEEEEecC
Q psy17188        457 CCSDGNIAVWDLHNQTLVRQFQGH-------------TDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       457 ~~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      .-.+..|.+.|.++++.+..+...             .+..+.|+++|+++.|+..|.
T Consensus       166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            556778999999999999888722             135689999998887777654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.75  E-value=0.00023  Score=70.13  Aligned_cols=413  Identities=9%  Similarity=0.024  Sum_probs=217.8

Q ss_pred             CCcceEEEECCCC-CcccCCCCCCcccCCCCCccccceeee-c-CCCcEEEEEEcCCCc-EEEEec-CCeEEEEeCCCCC
Q psy17188         71 GKPAYSYHVTTDG-QMQPVPFPPDALIGPGIPRHARQINTL-S-HGEVVCAVTISNPTK-YVYTGG-KGCVKVWDISQPG  145 (504)
Q Consensus        71 ~~~v~~~~~s~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~V~~v~~s~~~~-~l~~~~-d~~i~vw~~~~~~  145 (504)
                      -+.+..+++.+.+ .+.-.....+.+........  .+..+ . -......+++.+.+. +.++-. .+.|.+.+++...
T Consensus        36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~  113 (628)
T 4a0p_A           36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS--ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH  113 (628)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred             CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC--CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence            3567778887644 44444455555554433322  11222 2 123567788886544 444444 7899999987532


Q ss_pred             CCCceeeeeecCCCCceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-
Q psy17188        146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-  222 (504)
Q Consensus       146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-  222 (504)
                       ...+.   . ..-.....+++.|...+|+....  .+.|...+++......   +.........|++++++..|+.+. 
T Consensus       114 -~~~l~---~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~P~GlalD~~~~~LY~aD~  185 (628)
T 4a0p_A          114 -RQVLV---W-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT---LVPNVGRANGLTIDYAKRRLYWTDL  185 (628)
T ss_dssp             -CEEEE---C-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSCSSEEEEEEETTTTEEEEEET
T ss_pred             -EEEEE---e-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE---EECCCCCcceEEEccccCEEEEEEC
Confidence             11111   1 23355789999996666666542  5678888877544322   222345578999999777666664 


Q ss_pred             CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceE-EE-------------eecCC-
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK-VW-------------DISQP-  287 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~-~~-------------~~~~~-  287 (504)
                      ..+.|...|++.... ..+........++++.. +..+++-...+.|...|..+++.. +.             ..... 
T Consensus       186 ~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~  263 (628)
T 4a0p_A          186 DTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS  263 (628)
T ss_dssp             TTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSC
T ss_pred             CCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccc
Confidence            457899999875433 23333444566888765 445556556788999987665421 11             11000 


Q ss_pred             CCCCCc-----ccceecccC-CceEEEE-----EcCCC-------CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        288 GSKTPV-----SQLDCLQRD-NYIRSVK-----LLPDG-------RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       288 ~~~~~~-----~~~~~~~~~-~~v~~~~-----~~~~~-------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ......     ....+.... ....|.+     ..+++       .+|+.+. ...|+-..+..............-..+
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~~l~~~~~~~~  342 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ-KSAINRMVIDEQQSPDIILPIHSLRNV  342 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE-TTEEEEECCCTTCCCCEECCCTTCSCE
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeec-cceEEEEecccccCceEEEEehhcCCc
Confidence            000000     000000001 1111111     11222       2344433 344555554432111111111122457


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-cccccCCCceEEEEEcCCCCEEE-EeeCCCcEEEeeCCCC
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASP  427 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~iwd~~~~  427 (504)
                      ..+++.+..+. ++.+-...+.|+.++.........+.. .........+..+++...++.|+ +-+..+.|.+.+++. 
T Consensus       343 ~~ld~d~~~~~-iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G-  420 (628)
T 4a0p_A          343 RAIDYDPLDKQ-LYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG-  420 (628)
T ss_dssp             EEEEEETTTTE-EEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS-
T ss_pred             eEEEEecCCCe-EEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC-
Confidence            78888887665 555666677888887654321111110 00001233577999998876655 445677899999864 


Q ss_pred             CcceeecccCCCCceeEEEECCCCCEEE-EeeCCC--cEEEEEcCCcceEEEE-eecCCceEEEEEccCCCEEEEec
Q psy17188        428 TPRIKAELTSSAPACYALAISPDSKVCF-SCCSDG--NIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       428 ~~~~~~~~~~~~~~v~~l~~s~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      +..... ..........+++.|...+|. +-....  .|...+++ |.....+ ...-...+.|+++++++.|+.+.
T Consensus       421 ~~~~~l-~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d-G~~~~~l~~~~l~~P~gla~D~~~~~LYw~D  495 (628)
T 4a0p_A          421 RSVGVV-LKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSKPIALALDSRLGKLFWAD  495 (628)
T ss_dssp             CEEEEE-EECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             CeEEEE-EeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC-CCCcEEEEeccCCCccEEEEeCCCCEEEEEe
Confidence            322222 222344578899999544444 433222  56666665 3333333 22234578899998877776554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.74  E-value=4.1e-06  Score=70.49  Aligned_cols=202  Identities=15%  Similarity=0.135  Sum_probs=124.6

Q ss_pred             cceeeecCCC--cEEEEEEcCCCcEEEEec-C--CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEE-ec
Q psy17188        105 RQINTLSHGE--VVCAVTISNPTKYVYTGG-K--GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GG  178 (504)
Q Consensus       105 ~~~~~~~h~~--~V~~v~~s~~~~~l~~~~-d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~  178 (504)
                      +.+.+..|+.  -...+.|++ +.+..+.+ +  ..|+.+|+++++....+   ..   ...........+++.|.. .-
T Consensus        10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~---~l---~~~~fgeGi~~~~~~ly~ltw   82 (243)
T 3mbr_X           10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA---EV---PPPYFGAGIVAWRDRLIQLTW   82 (243)
T ss_dssp             EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE---EC---CTTCCEEEEEEETTEEEEEES
T ss_pred             EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE---eC---CCCcceeEEEEeCCEEEEEEe
Confidence            4555666754  366899987 55555555 3  58999999987433322   22   122222223333444444 45


Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCC-----CCeEEEEE
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDI  253 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~  253 (504)
                      .++.+.+||.++.+........++   =..++  ++++.|+.+..++.|.++|..+.+.+.++.-..     ..++.+.|
T Consensus        83 ~~~~v~v~D~~tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~  157 (243)
T 3mbr_X           83 RNHEGFVYDLATLTPRARFRYPGE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW  157 (243)
T ss_dssp             SSSEEEEEETTTTEEEEEEECSSC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred             eCCEEEEEECCcCcEEEEEeCCCC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence            688999999987665433333332   13444  467777777778899999999998888776422     34566776


Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEE-EeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKV-WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  322 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  322 (504)
                      . +|+..+..-.+..|.+.|.+++++.- +++..-.....  . .........+.++++|+++.|++.+.
T Consensus       158 ~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~--~-~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          158 V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDAD--A-LTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTT--S-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccc--c-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence            5 67666666578899999999998643 33221100000  0 00123346789999998877777654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.72  E-value=1.5e-05  Score=74.98  Aligned_cols=246  Identities=10%  Similarity=0.054  Sum_probs=139.6

Q ss_pred             eEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---Ce-EEEEECCCCce
Q psy17188        206 CYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NT-VRSWDLREGCV  279 (504)
Q Consensus       206 v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~-i~~wd~~~~~~  279 (504)
                      ...++|.|+  ...|+.+...+.|+.+|+.+++...... .......++++++++++++-...   .. +...+...+..
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~  219 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT  219 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence            467999984  4455555554899999998887665443 55668999999999944443321   11 22222211110


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                                     .............++++| ++++.++-..++.|+.+|..++.................++++|++
T Consensus       220 ---------------~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG  284 (433)
T 4hw6_A          220 ---------------ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG  284 (433)
T ss_dssp             ---------------CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS
T ss_pred             ---------------ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC
Confidence                           000111234467789999 6766656566788999998755431111111122233469999999


Q ss_pred             CCceeeeccCCCeEEEEecCCCCCCC-cccccc-------------cccCCCceEEEEE---------cCCCCEEEEeeC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGSKT-PVSQLD-------------CLQRDNYIRSVKL---------LPDGRTLIVGGE  415 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~-------------~~~~~~~i~~~~~---------s~~g~~l~~~~~  415 (504)
                      +. ++++-...+.|+.++........ ....+.             ....-.....+++         .++|.++++-..
T Consensus       285 ~~-LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~  363 (433)
T 4hw6_A          285 DW-AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD  363 (433)
T ss_dssp             SE-EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred             CE-EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence            75 56666678899998875321110 000000             0011234567999         777776666666


Q ss_pred             CCcEEEeeCCCCCcceeeccc---------------CCCCceeEEEEC-CCCCEEEEeeCCCcEEEEEcC
Q psy17188        416 ASNLSIWDLASPTPRIKAELT---------------SSAPACYALAIS-PDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~~~---------------~~~~~v~~l~~s-~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      .+.|+.++.. +.........               ........++++ +++.++++=..+++|+.++++
T Consensus       364 n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          364 SHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            7789998853 3221111100               011235677888 555555555556777777654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.72  E-value=6.8e-05  Score=68.34  Aligned_cols=253  Identities=10%  Similarity=0.056  Sum_probs=149.8

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecC
Q psy17188        208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      |.+..++. +|+.+ ....|+..++........+. ....+..++|++.+..|+ +-...+.|..+++..+....+    
T Consensus        38 C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~----  110 (349)
T 3v64_C           38 CKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV----  110 (349)
T ss_dssp             EEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----
T ss_pred             ccccccCc-eeEee-cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE----
Confidence            44444433 44443 34568888887665544444 344578999997555554 445678899999887653211    


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                                 ..........+++++.+..| ++-...+.|.+.++.....  .............+++.|.+.. ++.+
T Consensus       111 -----------~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~-ly~t  176 (349)
T 3v64_C          111 -----------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGT-IYWT  176 (349)
T ss_dssp             -----------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTE-EEEE
T ss_pred             -----------EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCe-EEEe
Confidence                       11112345788999855555 4445567899999875432  2222233346789999997765 4444


Q ss_pred             ccCC-CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188        366 HHYK-SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       366 ~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                      .... +.|..+++.........     ...-.....++++|++..|+.+. ..+.|..+|+..........  .......
T Consensus       177 d~~~~~~I~r~~~dG~~~~~~~-----~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~--~~~~~P~  249 (349)
T 3v64_C          177 DWGNTPRIEASSMDGSGRRIIA-----DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPF  249 (349)
T ss_dssp             ECSSSCEEEEEETTSCSCEESC-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEE
T ss_pred             ccCCCCEEEEEeCCCCCcEEEE-----ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe--CCCCCce
Confidence            4444 78888887643211111     11234467999998777776664 45679999987543322221  2233456


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188        444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI  489 (504)
Q Consensus       444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  489 (504)
                      .+++. ++..+++-...+.|..++..+|+.+..+.........+++
T Consensus       250 giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  294 (349)
T 3v64_C          250 AITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  294 (349)
T ss_dssp             EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             EEEEE-CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence            67773 4445555556788888887777766666533333444443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.72  E-value=0.00014  Score=65.59  Aligned_cols=282  Identities=9%  Similarity=0.014  Sum_probs=144.2

Q ss_pred             CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ...+.+|.|.+++..++++.++.| +...+.++.-..+. .........+.++.|.+ ++.++ ++.++.|.. ..+.++
T Consensus        35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~-~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRT-LVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECC-CCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred             CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECC-CCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence            346899999988888887777765 33333332212111 11112245688999986 44444 445564443 222222


Q ss_pred             -ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEE
Q psy17188        193 -PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISADGTKLWTGGLDNTVR  270 (504)
Q Consensus       193 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~  270 (504)
                       .........+...+..+.+.+++..++++ .++.|.. ..+.++. ..........+..+.+.+++.+++.+...+..+
T Consensus       110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~  187 (327)
T 2xbg_A          110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS  187 (327)
T ss_dssp             SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred             CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence             11111111123446778877676655554 4565432 2222322 222234566789999999888777665444333


Q ss_pred             EEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeec--cCCCc
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--SSAPA  348 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~  348 (504)
                      -+|-......              .. .......+..+.+.++++.+++ +.+|.+++.+...++.-......  .....
T Consensus       188 S~d~gG~tW~--------------~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~  251 (327)
T 2xbg_A          188 TWEPGQTAWE--------------PH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVG  251 (327)
T ss_dssp             EECTTCSSCE--------------EE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred             EeCCCCCcee--------------EC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence            3442111111              11 1123456788889998876544 46787777642211100001111  11235


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      +..+.+.+++.  +++.+. ++.+ .+..+.+..-.....  .......+..+.|.++++ +++++.+|.|.-++-
T Consensus       252 ~~~v~~~~~~~--~~~~g~-~g~i-~~S~DgG~tW~~~~~--~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          252 FLDLAYRTPNE--VWLAGG-AGAL-LCSQDGGQTWQQDVD--VKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT  320 (327)
T ss_dssp             EEEEEESSSSC--EEEEES-TTCE-EEESSTTSSCEECGG--GTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred             eEEEEecCCCE--EEEEeC-CCeE-EEeCCCCcccEEcCc--cCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence            77888887665  555544 5655 233333322111111  011234567888876555 555667887776653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.71  E-value=7.3e-05  Score=67.16  Aligned_cols=229  Identities=9%  Similarity=0.029  Sum_probs=137.9

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCC---CccceeeeecC
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASP---TPRIKAELTSS  202 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~---~~~~~~~~~~~  202 (504)
                      +|+.+....|+..|+++.....   .+   ........++|.++++.|+.+ ..++.|..+++...   .. ....+...
T Consensus         3 ~ll~~~~~~I~~i~~~~~~~~~---~~---~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~   75 (316)
T 1ijq_A            3 YLFFTNRHEVRKMTLDRSEYTS---LI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRD   75 (316)
T ss_dssp             EEEEECBSSEEEEETTSCCCEE---EE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSS
T ss_pred             EEEEECCCeEEEEECCCcceEe---hh---cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCC
Confidence            4555666779999987643211   11   234567899999876656555 45688999998751   11 11222222


Q ss_pred             cCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCce
Q psy17188        203 APACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCV  279 (504)
Q Consensus       203 ~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~  279 (504)
                      ......+++.+.+..| ++-..++.|.+.+++.......+.........+++.|.+..|+.+...  +.|...+++....
T Consensus        76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~  155 (316)
T 1ijq_A           76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  155 (316)
T ss_dssp             CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence            2345788888654444 454567889999987654333333344567899999866655554432  6788888765432


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      +.+               ....-.....+++++++..|+.+. ..+.|..+|+....................+++.. +
T Consensus       156 ~~~---------------~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~  219 (316)
T 1ijq_A          156 YSL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D  219 (316)
T ss_dssp             EEE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T
T ss_pred             EEE---------------EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C
Confidence            211               011234578999999877776654 55689999987543322222222233456777742 2


Q ss_pred             CCceeeeccCCCeEEEEecCCC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                       . ++++....+.|..++..++
T Consensus       220 -~-ly~~d~~~~~V~~~~~~~g  239 (316)
T 1ijq_A          220 -K-VFWTDIINEAIFSANRLTG  239 (316)
T ss_dssp             -E-EEEEETTTTEEEEEETTTC
T ss_pred             -E-EEEEECCCCeEEEEeCCCC
Confidence             2 6667677788888886543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.69  E-value=3.3e-06  Score=85.74  Aligned_cols=249  Identities=12%  Similarity=0.072  Sum_probs=130.2

Q ss_pred             ceEEEEEC-CCCCEEEEEeC-CC----cEEEEECCCC-eEEEe-ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEE
Q psy17188        205 ACYALAIS-PDSKVCFSCCS-DG----NIAVWDLHNQ-TLVRQ-FQGHTDGASCIDISADGTKLWTGGLD-----NTVRS  271 (504)
Q Consensus       205 ~v~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~  271 (504)
                      .+...+|| |||++|+.+.. +|    .|+++|+.++ +.+.. +.   .....+.|+||++.|+....|     ..|++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            47789999 99998875543 33    4999999998 63211 11   123468899999888877665     25777


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCccc--eeeeccCC
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRI--KAELTSSA  346 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~--~~~~~~~~  346 (504)
                      +++.+++..           .. .+...........+.|+|||++|+....   ...|.++|+.++....  ........
T Consensus       252 ~~lgt~~~~-----------~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~  319 (751)
T 2xe4_A          252 HVMGKLQSE-----------DV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK  319 (751)
T ss_dssp             EETTSCGGG-----------CE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT
T ss_pred             EECCCCchh-----------cE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC
Confidence            887765310           00 0100112234567899999999887653   3458888987753222  22222223


Q ss_pred             CceeeEEECCCCCCceeeeccC---CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCc--EEE
Q psy17188        347 PACYALAISPDSKSPFFSSHHY---KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN--LSI  421 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~i  421 (504)
                      .....+.|.. ++.+++.+...   ...|..+++.........  +........+..+.+. .+.++++...++.  |++
T Consensus       320 ~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~  395 (751)
T 2xe4_A          320 GVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT  395 (751)
T ss_dssp             TCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred             CceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence            3334444332 55434444322   235666666532111110  1111112234556665 3345556666775  556


Q ss_pred             eeC-------CCCCcceeecccCCCCceeEEEE----CCCCC-EEEEeeCC---CcEEEEEcCCcce
Q psy17188        422 WDL-------ASPTPRIKAELTSSAPACYALAI----SPDSK-VCFSCCSD---GNIAVWDLHNQTL  473 (504)
Q Consensus       422 wd~-------~~~~~~~~~~~~~~~~~v~~l~~----s~~~~-~l~s~~~d---g~i~iwd~~~~~~  473 (504)
                      +++       .+++......+.... .+..+.+    +++++ ++++.+..   ..++.+|+.+++.
T Consensus       396 ~dl~~~~~~~~~g~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~  461 (751)
T 2xe4_A          396 MMADSQDGVFKAGTGLREVVMEEPI-FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR  461 (751)
T ss_dssp             EECCTTTSCCCTTTCCEECCCCCSS-CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred             EecccccccccCCccceEECCCCce-eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence            665       333202222232221 1223322    34555 44444332   4677888877653

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.68  E-value=1.2e-05  Score=75.66  Aligned_cols=245  Identities=8%  Similarity=0.014  Sum_probs=139.4

Q ss_pred             eEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC-C----eEEEEECCCCce
Q psy17188        206 CYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD-N----TVRSWDLREGCV  279 (504)
Q Consensus       206 v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g----~i~~wd~~~~~~  279 (504)
                      ...++++| ++..|+++...+.|+.+|+..++...... .......++|++++++|+.+... +    .+...+.. +..
T Consensus       139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~  216 (430)
T 3tc9_A          139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF  216 (430)
T ss_dssp             CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred             CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence            46789998 45566666665889999998876554444 55668899999999966655542 2    23333332 221


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      .              .............++++| ++.++++-..++.|..++............. .......++++|++
T Consensus       217 ~--------------~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG  281 (430)
T 3tc9_A          217 K--------------VITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSG  281 (430)
T ss_dssp             C--------------SEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTS
T ss_pred             e--------------eeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCC
Confidence            0              000111234467889999 6776666667789999998765321222221 22356789999999


Q ss_pred             CCceeeeccCCCeEEEEecCCCCC-CCccccccc-------------ccCCCceE-EEEEc--------CCCCEEEEeeC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQPGS-KTPVSQLDC-------------LQRDNYIR-SVKLL--------PDGRTLIVGGE  415 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~-------------~~~~~~i~-~~~~s--------~~g~~l~~~~~  415 (504)
                      +. ++++....+.|..++...... ......+..             ...-.... .++..        ++|.+.++=..
T Consensus       282 ~~-lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~  360 (430)
T 3tc9_A          282 NY-AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE  360 (430)
T ss_dssp             SE-EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred             CE-EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence            85 556666788899988753210 000000000             00011122 44543        34555555555


Q ss_pred             CCcEEEeeCCCCCcceeecc-----cC----------CCCceeEEEECCC-CCEEEEeeCCCcEEEEEcC
Q psy17188        416 ASNLSIWDLASPTPRIKAEL-----TS----------SAPACYALAISPD-SKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       416 dg~i~iwd~~~~~~~~~~~~-----~~----------~~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~  469 (504)
                      .+.|+.++. ++........     .+          .......++++|+ +.++++-..+..|+.++++
T Consensus       361 n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          361 NHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             GTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            677888884 3322221111     00          1124678899985 5555554556778877654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.68  E-value=4.9e-06  Score=78.25  Aligned_cols=245  Identities=10%  Similarity=0.072  Sum_probs=136.7

Q ss_pred             CceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-CC----cEEEEECC
Q psy17188        160 NYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DG----NIAVWDLH  233 (504)
Q Consensus       160 ~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg----~i~iwd~~  233 (504)
                      .....++++| ++..|.++...+.|+.+|++....   ..+.........++|+++++.|+++.. ++    .+...+. 
T Consensus       137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-  212 (430)
T 3tc9_A          137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-  212 (430)
T ss_dssp             SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred             CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence            3467889998 456666665558899999876542   222234455789999999996666654 22    2333443 


Q ss_pred             CCeEE--EeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        234 NQTLV--RQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       234 ~~~~~--~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      .+...  ..+. .......++++| ++.++++-..++.|..++..++....+              ...........++|
T Consensus       213 ~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~--------------~~~~~~~~P~gia~  277 (430)
T 3tc9_A          213 ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL--------------FTIQDSGWEFHIQF  277 (430)
T ss_dssp             GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE--------------EECSSSSCCEEEEE
T ss_pred             CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE--------------EEcCCCCcceeEEE
Confidence            23211  2222 123456788999 677666766788999999987764211              11112234678999


Q ss_pred             cCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeeccC---------------CCcee-eEEECC------CCCCceeee
Q psy17188        311 LPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTSS---------------APACY-ALAISP------DSKSPFFSS  365 (504)
Q Consensus       311 ~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~~---------------~~~i~-~~~~~~------~~~~~~~~~  365 (504)
                      +|+|++|+++ ...+.|..++........  ...+...               -.... .++..+      |....++++
T Consensus       278 ~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva  357 (430)
T 3tc9_A          278 HPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC  357 (430)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred             cCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE
Confidence            9999965555 456788888765321110  1111100               01122 444432      122226666


Q ss_pred             ccCCCeEEEEecCCCCCCCccccc-------------ccccCCCceEEEEEcCC-CCEEEEeeCCCcEEEeeCC
Q psy17188        366 HHYKSCVKVWDISQPGSKTPVSQL-------------DCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       366 ~~~~~~i~i~d~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~s~~-g~~l~~~~~dg~i~iwd~~  425 (504)
                      -...+.|+.++.. + ....+...             .....-.....++++|+ +.++++-..+..|+.++++
T Consensus       358 D~~n~~I~~i~~~-G-~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          358 DRENHCIRILTPQ-G-RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             EGGGTEEEEECTT-S-EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             ECCCcEEEEECCC-C-cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            6677788888732 1 11000000             00011235678999995 5555554456678777653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.66  E-value=4.1e-05  Score=65.47  Aligned_cols=208  Identities=10%  Similarity=0.105  Sum_probs=128.2

Q ss_pred             cCCCcEEEEEEcCCCcEEEE-ec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        111 SHGEVVCAVTISNPTKYVYT-GG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~-~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      +-.+.+..++++|++..|.+ .. ++.|...|.+ +.   .+..+.. ........+++.+++.++++.-.++.+.++++
T Consensus        24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~---v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD---LIRTIPL-DFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC---EEEEEEC-SSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC---EEEEEec-CCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            44457999999997665544 44 7788888876 32   2233322 22356788999999887777656788999988


Q ss_pred             CCCCc-cceeee------ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC---CCeEEEee-------cCCCCCeEEE
Q psy17188        189 ASPTP-RIKAEL------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH---NQTLVRQF-------QGHTDGASCI  251 (504)
Q Consensus       189 ~~~~~-~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-------~~h~~~v~~~  251 (504)
                      ..... ......      .........++|+|+++.|+++.+.....+|.++   ....+..+       ..+...+.++
T Consensus        99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l  178 (255)
T 3qqz_A           99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA  178 (255)
T ss_dssp             CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred             CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence            75442 111111      1223446899999998877777776665666554   11111111       1234567899


Q ss_pred             EEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17188        252 DISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD  330 (504)
Q Consensus       252 ~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d  330 (504)
                      +++|. +++++.....+.|..+|........+.+....       ......-.....|++.++|+ |++.++.+.+++|.
T Consensus       179 ~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~-------~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~  250 (255)
T 3qqz_A          179 EFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGS-------RGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT  250 (255)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTG-------GGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred             EEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCcc-------CCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence            99995 45666677778899999876544444332210       00011123568899999998 44446767676665


Q ss_pred             C
Q psy17188        331 L  331 (504)
Q Consensus       331 ~  331 (504)
                      -
T Consensus       251 ~  251 (255)
T 3qqz_A          251 P  251 (255)
T ss_dssp             C
T ss_pred             e
Confidence            3

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.62  E-value=4e-05  Score=70.97  Aligned_cols=253  Identities=11%  Similarity=0.068  Sum_probs=150.4

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        208 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       208 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      |.+..++ .+|+.+ ....|+.+++........+. ....+..++|.+.+..| ++-...+.|+.+++..+....+    
T Consensus        81 C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~----  153 (386)
T 3v65_B           81 CKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV----  153 (386)
T ss_dssp             EEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE----
T ss_pred             ECCcccc-ceeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE----
Confidence            3333443 344444 34578888887765544444 34557899999755544 4555678899999887653221    


Q ss_pred             CCCCCCcccceecccCCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeee
Q psy17188        287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS  365 (504)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  365 (504)
                                 ..........+++++.+..|+ +-...+.|.+.++.....  .............+++.|.+.. ++.+
T Consensus       154 -----------~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l~~P~giavdp~~g~-ly~t  219 (386)
T 3v65_B          154 -----------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGT-IYWT  219 (386)
T ss_dssp             -----------ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSCSCEEEEEEETTTTE-EEEE
T ss_pred             -----------EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCCCCCcEEEEEcCCCe-EEEe
Confidence                       111122356788888655554 445567888888765432  2222333346789999988775 3444


Q ss_pred             ccCC-CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCcee
Q psy17188        366 HHYK-SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACY  443 (504)
Q Consensus       366 ~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~  443 (504)
                      .... +.|..+++.........     ...-.....++++|++..|+.+. ..+.|..+|+..........  .......
T Consensus       220 d~~~~~~I~r~~~dG~~~~~~~-----~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~  292 (386)
T 3v65_B          220 DWGNTPRIEASSMDGSGRRIIA-----DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPF  292 (386)
T ss_dssp             ECSSSCEEEEEETTSCSCEEEE-----CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC--SSCSSEE
T ss_pred             ccCCCCEEEEEeCCCCCcEEEE-----ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE--CCCCCce
Confidence            4444 78888887643211111     11233467999998777766654 45679999987543322221  2233456


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE
Q psy17188        444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI  489 (504)
Q Consensus       444 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  489 (504)
                      .+++ ..+.++++-...+.|..++..+|+.+..+.........|++
T Consensus       293 giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          293 AITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             EEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             EEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence            7787 34455555566788999997778777666543334444544

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.62  E-value=1.4e-05  Score=75.14  Aligned_cols=243  Identities=11%  Similarity=0.043  Sum_probs=136.5

Q ss_pred             CceEEEEEccC--CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEEC
Q psy17188        160 NYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDL  232 (504)
Q Consensus       160 ~~v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~  232 (504)
                      .....++|+|+  ...|..+...+.|+.++..+++.   ..+.........++|+++++ |+.+...+     .+...+.
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v---~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~  214 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV---DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR  214 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE---EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE---EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence            34668999984  45566655448899999876543   22333445578999999999 44444322     1333332


Q ss_pred             CCCeE-EEeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECCCCce-EEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        233 HNQTL-VRQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLREGCV-KVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       233 ~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      ..+.. ...+. .......++++| ++.++++-..++.|+.+|..++.+ ...              ...........++
T Consensus       215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~--------------~~~~~~~~~~~ia  279 (433)
T 4hw6_A          215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE--------------VMMDTKGSNFHIV  279 (433)
T ss_dssp             GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE--------------EECSCCSSCEEEE
T ss_pred             CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE--------------eccCCCCCcccEE
Confidence            21110 01111 223456788999 676666666778999999987765 211              0011112234699


Q ss_pred             EcCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeecc---------------CCCceeeEEE---------CCCCCCce
Q psy17188        310 LLPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTS---------------SAPACYALAI---------SPDSKSPF  362 (504)
Q Consensus       310 ~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~---------------~~~~i~~~~~---------~~~~~~~~  362 (504)
                      ++|++++|+++ ...+.|..++........  ...+.+               .-.....+++         .+++.  +
T Consensus       280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~--l  357 (433)
T 4hw6_A          280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD--F  357 (433)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE--E
T ss_pred             EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc--E
Confidence            99999966555 456789998765321111  111111               1123556888         55554  7


Q ss_pred             eeeccCCCeEEEEecCCCCCCCcccc-------------cccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCC
Q psy17188        363 FSSHHYKSCVKVWDISQPGSKTPVSQ-------------LDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       363 ~~~~~~~~~i~i~d~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~  425 (504)
                      +++-...+.|+.++...  ....+..             ......-.....++++ ++|.++++=..++.|+.++++
T Consensus       358 yvaD~~n~~I~~~~~~G--~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          358 YFCDRDSHTVRVLTPEG--RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EEEETTTTEEEEECTTS--EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EEEECCCCEEEEECCCC--CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            77777788898887421  1000000             0000112346789999 566655555556678877654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.61  E-value=0.00017  Score=65.63  Aligned_cols=241  Identities=11%  Similarity=0.041  Sum_probs=143.2

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEee
Q psy17188        163 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQF  241 (504)
Q Consensus       163 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~  241 (504)
                      +|.+..++ .+|+.+. ...|+..++.....  .... ........++|.+....|+.. ...+.|..+++........+
T Consensus        37 ~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~--~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~  111 (349)
T 3v64_C           37 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEY--TLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV  111 (349)
T ss_dssp             CEEESSSC-CEEEEEC-BSCEEEECTTSCCE--EEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred             cccccccC-ceeEeec-ccceEEEeCCCCee--EEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence            34444443 3444443 45688888765432  2222 233447899999766655554 45678999998876544434


Q ss_pred             cCCCCCeEEEEEccCC-CEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE
Q psy17188        242 QGHTDGASCIDISADG-TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  320 (504)
Q Consensus       242 ~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  320 (504)
                      .........+++.+.+ +++++-...+.|.+.+++......               ...........++++|.+..|+..
T Consensus       112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~---------------l~~~~l~~P~~iavdp~~g~ly~t  176 (349)
T 3v64_C          112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV---------------LLWQSLEKPRAIALHPMEGTIYWT  176 (349)
T ss_dssp             CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---------------EECTTCSCEEEEEEETTTTEEEEE
T ss_pred             eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE---------------EEeCCCCCcceEEEecCcCeEEEe
Confidence            3333456788998754 445565667889999887653221               111223457899999976666655


Q ss_pred             eC-C-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCce
Q psy17188        321 GE-A-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYI  398 (504)
Q Consensus       321 ~~-d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i  398 (504)
                      .. . +.|..+++.......  .....-.....++++++++. ++++-...+.|..+|+...... .+..    ......
T Consensus       177 d~~~~~~I~r~~~dG~~~~~--~~~~~~~~PnGla~d~~~~~-lY~aD~~~~~I~~~~~dG~~~~-~~~~----~~~~~P  248 (349)
T 3v64_C          177 DWGNTPRIEASSMDGSGRRI--IADTHLFWPNGLTIDYAGRR-MYWVDAKHHVIERANLDGSHRK-AVIS----QGLPHP  248 (349)
T ss_dssp             ECSSSCEEEEEETTSCSCEE--SCCSSCSCEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSCE-EEEC----SSCSSE
T ss_pred             ccCCCCEEEEEeCCCCCcEE--EEECCCCCcceEEEeCCCCE-EEEEECCCCEEEEEeCCCCceE-EEEe----CCCCCc
Confidence            43 3 678888876542221  11223345789999987776 5566667789999998643211 1111    113345


Q ss_pred             EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      ..+++. .+..+++-...+.|..++..+++....
T Consensus       249 ~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~  281 (349)
T 3v64_C          249 FAITVF-EDSLYWTDWHTKSINSANKFTGKNQEI  281 (349)
T ss_dssp             EEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred             eEEEEE-CCEEEEecCCCCeEEEEEccCCCccEE
Confidence            677773 444555555667788888655554433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.61  E-value=0.00012  Score=68.02  Aligned_cols=231  Identities=10%  Similarity=0.043  Sum_probs=141.0

Q ss_pred             cEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCC--ccceeeeecC
Q psy17188        126 KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPT--PRIKAELTSS  202 (504)
Q Consensus       126 ~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~--~~~~~~~~~~  202 (504)
                      .+|+.+....|+..+++.....    .+  ......+..++|.+....|..+ ...+.|+.+++....  ..........
T Consensus        84 ~~ll~~~~~~I~~i~l~~~~~~----~~--~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~  157 (400)
T 3p5b_L           84 AYLFFTNRHEVRKMTLDRSEYT----SL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD  157 (400)
T ss_dssp             CEEEEEETTEEEEECTTSCSCE----EE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred             ceeEEeccceeEEEccCCccee----Ee--ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence            3566666688999998764221    11  1345678899999866666655 456788888886522  1112223323


Q ss_pred             cCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCce
Q psy17188        203 APACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL--DNTVRSWDLREGCV  279 (504)
Q Consensus       203 ~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~  279 (504)
                      ......+++.+. +++.++-...+.|.+.+++.......+.........|++.|.+..|+....  .+.|...+++....
T Consensus       158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~  237 (400)
T 3p5b_L          158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  237 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred             CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence            445778999874 445555556788999998766544444444556889999996656555442  36788888875442


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      ..+               ....-.....+++++++..|+.+. ..+.|..+|+....................+++..  
T Consensus       238 ~~~---------------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~--  300 (400)
T 3p5b_L          238 YSL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--  300 (400)
T ss_dssp             EEE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET--
T ss_pred             EEE---------------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC--
Confidence            211               111224578999998877777664 45689999987643333322222233455666632  


Q ss_pred             CCceeeeccCCCeEEEEecCCC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .. ++.+....+.|..+|..++
T Consensus       301 ~~-lywtd~~~~~V~~~~~~~G  321 (400)
T 3p5b_L          301 DK-VFWTDIINEAIFSANRLTG  321 (400)
T ss_dssp             TE-EEEEESSSCSEEEEESSSC
T ss_pred             CE-EEEecCCCCeEEEEEcCCC
Confidence            22 5666667777888875544

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.58  E-value=0.00025  Score=63.97  Aligned_cols=276  Identities=9%  Similarity=0.016  Sum_probs=143.6

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-----cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-----SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPG  145 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~  145 (504)
                      ...+..+.+.+++...++. ..+.++...  ...+.-...     .....+.+|.|.+ ++.++++.++.|.. ..+.++
T Consensus        35 ~~~~~~v~~~~~~~~~~~G-~~g~i~~s~--DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWLVG-VNATLMETR--DGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SSCEEEEEESSSSCEEEEE-TTTEEEEES--STTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTTS
T ss_pred             CCcEEEEEECCCCcEEEEc-CCCeEEEeC--CCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCCC
Confidence            3467777776666555533 233333221  111111111     1245789999986 56666666775543 333332


Q ss_pred             CCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC
Q psy17188        146 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG  225 (504)
Q Consensus       146 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  225 (504)
                      .-..+...  ..+.+.+..+.+.++++.++++. ++.|.  ...++..............+..+.+.+++.+++.+. +|
T Consensus       110 tW~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~-~g~v~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G  183 (327)
T 2xbg_A          110 SWSQIPLD--PKLPGSPRLIKALGNGSAEMITN-VGAIY--RTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RG  183 (327)
T ss_dssp             SCEECCCC--TTCSSCEEEEEEEETTEEEEEET-TCCEE--EESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred             CceECccc--cCCCCCeEEEEEECCCCEEEEeC-CccEE--EEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence            22211110  01234577888887777666664 55443  222212222223334455788999999888776664 45


Q ss_pred             cEEE-EEC--CCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        226 NIAV-WDL--HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       226 ~i~i-wd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      .+.. +|-  .+.+.+.  ......+..+.+.+++..+ .++.+|.+++.+.+.++  .|....         .......
T Consensus       184 ~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~--tW~~~~---------~~~~~~~  249 (327)
T 2xbg_A          184 SFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE--NWGELL---------SPLRRNS  249 (327)
T ss_dssp             SEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE--EECCCB---------CTTSSCC
T ss_pred             cEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC--eeEecc---------CCcccCC
Confidence            5444 342  2333332  2345678899999988655 45567887776533232  222110         0000112


Q ss_pred             CceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-ccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188        303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      ..+.++.+.++++.++++. ++.+. +....++ .............+..+.+.+++.   ++..+.+|.|..++
T Consensus       250 ~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~---~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          250 VGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ---GFILGQKGILLRYV  319 (327)
T ss_dssp             SCEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE---EEEECSTTEEEEEC
T ss_pred             cceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc---eEEEcCCceEEEEc
Confidence            3478889998887666654 66663 3333332 111111111234677788865443   44555677776665

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.54  E-value=9.1e-05  Score=68.57  Aligned_cols=241  Identities=10%  Similarity=0.031  Sum_probs=143.7

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeec
Q psy17188        164 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       164 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      |.+..+ ..+|+.+. ...|+.+++.....  .. +.........++|.+.+..|+.. ...+.|..+++........+.
T Consensus        81 C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~--~~-~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~  155 (386)
T 3v65_B           81 CKALGP-EPVLLFAN-RIDIRQVLPHRSEY--TL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS  155 (386)
T ss_dssp             EEECSS-CCEEEEEC-BSCEEEECTTSCCC--EE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred             ECCccc-cceeEeec-CccceeeccCCCcE--EE-EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence            344444 33444443 46788888876543  22 22233457899999765555544 456789999988765444444


Q ss_pred             CCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        243 GHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       243 ~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      ........+++.+.+. ++++-...+.|.+.+++......               ...........++++|.+..|+...
T Consensus       156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~---------------l~~~~l~~P~giavdp~~g~ly~td  220 (386)
T 3v65_B          156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV---------------LLWQSLEKPRAIALHPMEGTIYWTD  220 (386)
T ss_dssp             SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE---------------EECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE---------------eecCCCCCCcEEEEEcCCCeEEEec
Confidence            3334567788887544 44555566788888876543211               1112234578999999777666654


Q ss_pred             C-C-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceE
Q psy17188        322 E-A-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR  399 (504)
Q Consensus       322 ~-d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~  399 (504)
                      . . +.|..+++......  ............++++|+++. ++++-...+.|..+|+...... .+..    .......
T Consensus       221 ~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGlavd~~~~~-lY~aD~~~~~I~~~d~dG~~~~-~~~~----~~~~~P~  292 (386)
T 3v65_B          221 WGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRR-MYWVDAKHHVIERANLDGSHRK-AVIS----QGLPHPF  292 (386)
T ss_dssp             CSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEEGGGTE-EEEEETTTTEEEEECTTSCSCE-EEEC----SSCSSEE
T ss_pred             cCCCCEEEEEeCCCCCcE--EEEECCCCCeeeEEEeCCCCE-EEEEECCCCEEEEEeCCCCeeE-EEEE----CCCCCce
Confidence            4 3 67888887654222  222223345789999987776 5666667788999997643211 1111    1233456


Q ss_pred             EEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       400 ~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      .+++. .+.++++-...+.|..++..+++.....
T Consensus       293 giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i  325 (386)
T 3v65_B          293 AITVF-EDSLYWTDWHTKSINSANKFTGKNQEII  325 (386)
T ss_dssp             EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             EEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence            77773 4445555556777888886566544433

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.53  E-value=0.0017  Score=68.44  Aligned_cols=361  Identities=11%  Similarity=0.074  Sum_probs=184.3

Q ss_pred             ecCCCcEEEEEEcCC------CcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEcc--CCCEEEEecC
Q psy17188        110 LSHGEVVCAVTISNP------TKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP--DGRTLIVGGE  179 (504)
Q Consensus       110 ~~h~~~V~~v~~s~~------~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~  179 (504)
                      ..-.+.|.|+++.|.      +++++.|.  |++|+|+++.+.   ..+..... +......++.+..  ...+|..|-.
T Consensus       550 ~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l---~~~~~~~L-~~~~~p~si~l~~~~~~~~L~igl~  625 (1158)
T 3ei3_A          550 TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF---ELLHKEML-GGEIIPRSILMTTFESSHYLLCALG  625 (1158)
T ss_dssp             EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC---CEEEEEEC-CSSCCEEEEEEEEETTEEEEEEEET
T ss_pred             cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC---CeEEEEEC-CCCCCCcEEEEEEeCCCcEEEEEeC
Confidence            344668999999863      46888776  899999999752   22222222 2223344444432  3457888989


Q ss_pred             CCcEEEEeCCC--CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeE-EEEEccC
Q psy17188        180 ASNLSIWDLAS--PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISAD  256 (504)
Q Consensus       180 dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~  256 (504)
                      ||.+.-+.++.  ++........-...++.-..+...+..-+.+..+....++.-+ ++.... .-....+. ...|+..
T Consensus       626 dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se  703 (1158)
T 3ei3_A          626 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSD  703 (1158)
T ss_dssp             TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCS
T ss_pred             CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcc
Confidence            99987766653  2221111111112344444444344333333345555555433 332221 11112332 3335332


Q ss_pred             --CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----------
Q psy17188        257 --GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----------  323 (504)
Q Consensus       257 --~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------  323 (504)
                        .+-++..+ ++.+++..+..-+  .|            ......-...++.++++|+.+.++++..+           
T Consensus       704 ~~~~g~v~~~-~~~LrI~~i~~~~--~~------------~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~  768 (1158)
T 3ei3_A          704 GYPDSLALAN-NSTLTIGTIDEIQ--KL------------HIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT  768 (1158)
T ss_dssp             SSTTEEEEEC-SSCEEEEEECCSS--SE------------EEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEE
T ss_pred             cCCCcEEEEc-CCceEEEEecccC--Ce------------eEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccc
Confidence              12344333 4558888765421  01            12222234456777777766655443211           


Q ss_pred             --------------------------------------CcEEEEeCCCCCccceeeeccCCCceeeEE---ECCCCCCce
Q psy17188        324 --------------------------------------SNLSIWDLASPTPRIKAELTSSAPACYALA---ISPDSKSPF  362 (504)
Q Consensus       324 --------------------------------------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~  362 (504)
                                                            +.|++.|-.+.+......+... ..+.+++   +..+.+ .+
T Consensus       769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n-E~~~sv~~v~~~~~~~-~~  846 (1158)
T 3ei3_A          769 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN-EYALSLVSCKLGKDPN-TY  846 (1158)
T ss_dssp             ESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT-EEEEEEEEECCTTCCC-CE
T ss_pred             hhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC-cceEEEEEEEEccCCC-EE
Confidence                                                  1355566554443323333332 2334443   333322 35


Q ss_pred             eeecc----------CCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        363 FSSHH----------YKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       363 ~~~~~----------~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      ++.|.          ..|.|.+|++..    ..+........++.+++++-- +|+ |++| ....|++|++...+.+. 
T Consensus       847 lvVGTa~~~~~e~~~~~Gri~vf~v~~----~kL~lv~~~~v~g~v~al~~~-~g~-Lla~-ig~~l~vy~l~~~~~L~-  918 (1158)
T 3ei3_A          847 FIVGTAMVYPEEAEPKQGRIVVFQYSD----GKLQTVAEKEVKGAVYSMVEF-NGK-LLAS-INSTVRLYEWTTEKELR-  918 (1158)
T ss_dssp             EEEEEEECCTTCSSCCCEEEEEEEEET----TEEEEEEEEEESSCEEEEEEE-TTE-EEEE-ETTEEEEEEECTTSCEE-
T ss_pred             EEEEeeecCCCCCCCCceEEEEEEEEC----CEEEEEEEEEcCCcCEEEeee-CCE-EEEE-cCCEEEEEECCCCceEE-
Confidence            65554          357899999872    233333334456778887654 354 4444 34789999998654333 


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc--CCcceEEEEe-ecCCceEEEEEccCCCEEEEecCCC
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL--HNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDN  503 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~s~s~Dg  503 (504)
                      ...... ..+..+.....+++++.|+.-..|.++..  ..+++...-+ .+...++++.|-.++ .++.+..+|
T Consensus       919 ~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~g  990 (1158)
T 3ei3_A          919 TECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAF  990 (1158)
T ss_dssp             EEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTS
T ss_pred             EEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCC
Confidence            111111 11222233335789999988777777654  3444332222 244568888887554 455555544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.53  E-value=0.0002  Score=61.25  Aligned_cols=210  Identities=12%  Similarity=0.091  Sum_probs=125.8

Q ss_pred             eecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEE
Q psy17188        240 QFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  318 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  318 (504)
                      .+.+-...+..++|+|+++.|+ +...++.|...|.. +++..             .+. .........+++.+++.+++
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~-------------~i~-l~g~~D~EGIa~~~~g~~~v   85 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR-------------TIP-LDFVKDLETIEYIGDNQFVI   85 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE-------------EEE-CSSCSSEEEEEECSTTEEEE
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE-------------EEe-cCCCCChHHeEEeCCCEEEE
Confidence            4566667899999999766555 46778899999998 55321             111 12224578899999888767


Q ss_pred             EEeCCCcEEEEeCCCCCccc-eeee------ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc--
Q psy17188        319 VGGEASNLSIWDLASPTPRI-KAEL------TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL--  389 (504)
Q Consensus       319 ~~~~dg~i~v~d~~~~~~~~-~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--  389 (504)
                      +.-.++.+.++++....... ....      .........+++.|.++.++++.......|..|+  .......+...  
T Consensus        86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~  163 (255)
T 3qqz_A           86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKD  163 (255)
T ss_dssp             EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEEC
T ss_pred             EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecc
Confidence            76667789999876544211 1111      1234456899999998864443333322455554  10000011111  


Q ss_pred             ---ccccCCCceEEEEEcCCC-CEEEEeeCCCcEEEeeCCCCCcceeecccCC-------CCceeEEEECCCCCEEEEee
Q psy17188        390 ---DCLQRDNYIRSVKLLPDG-RTLIVGGEASNLSIWDLASPTPRIKAELTSS-------APACYALAISPDSKVCFSCC  458 (504)
Q Consensus       390 ---~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~s~~~~~l~s~~  458 (504)
                         ........+..++++|.. ++++.......+.++|.+. +.+....+...       ...-..++|.++|++.++ +
T Consensus       164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-s  241 (255)
T 3qqz_A          164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-S  241 (255)
T ss_dssp             HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-E
T ss_pred             hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-c
Confidence               011123346799999964 4555666667788999764 44444444421       124567899999985555 6


Q ss_pred             CCCcEEEEEc
Q psy17188        459 SDGNIAVWDL  468 (504)
Q Consensus       459 ~dg~i~iwd~  468 (504)
                      +...++++.-
T Consensus       242 E~n~~y~f~~  251 (255)
T 3qqz_A          242 EPNRFYRFTP  251 (255)
T ss_dssp             TTTEEEEEEC
T ss_pred             CCceEEEEEe
Confidence            6666666653

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.49  E-value=0.0008  Score=70.95  Aligned_cols=327  Identities=13%  Similarity=0.113  Sum_probs=163.3

Q ss_pred             CcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC------CCEEEEecC-CCcEEEE
Q psy17188        114 EVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD------GRTLIVGGE-ASNLSIW  186 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~-dg~i~iw  186 (504)
                      ..|.+.+.+. . .++.+.++.+.+++++.+.    +.......-...|.|+++.|.      ++++++|.. |++|+|+
T Consensus       514 ~~I~~As~n~-~-~vvva~g~~l~~fel~~~~----L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~  587 (1158)
T 3ei3_A          514 KNISVASCNS-S-QVVVAVGRALYYLQIHPQE----LRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL  587 (1158)
T ss_dssp             CCCCEEEECS-S-EEEEEETTEEEEEEEETTE----EEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred             CEEEEEEeCC-C-EEEEEECCEEEEEEeeCCc----eeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence            3455555543 2 3333346778888776532    111222233567999999863      479999986 9999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeCCCcEEEEECC--CCeEEEe---ecCCCCCeEEEEEccCCC-
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLH--NQTLVRQ---FQGHTDGASCIDISADGT-  258 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~--~~~~~~~---~~~h~~~v~~~~~~~~~~-  258 (504)
                      ++.+.+......+... ....++.+.  ....+|..|-.||.+.-+.++  +++....   +-| ..++.=..+...+. 
T Consensus       588 sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~  665 (1158)
T 3ei3_A          588 KLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTT  665 (1158)
T ss_dssp             ETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCE
T ss_pred             ECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCce
Confidence            9986554333333221 123333332  234588899999988665543  4443321   222 34444334443333 


Q ss_pred             EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD--GRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      .+++.+ +....++.-+ +++..-.+               ....--....|+..  .+-++..+ ++.+++..+.....
T Consensus       666 ~V~a~s-~rp~liy~~~-~~l~~s~l---------------~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~  727 (1158)
T 3ei3_A          666 NVFACS-DRPTVIYSSN-HKLVFSNV---------------NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQK  727 (1158)
T ss_dssp             EEEEES-SSCEEEEESS-SSEEEEEB---------------SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSS
T ss_pred             eEEEEC-CCCEEEEEcC-CceEEecc---------------ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCC
Confidence            333333 4444444332 33321111               11111122334331  23344443 45588887755433


Q ss_pred             cceeeeccCCCceeeEEECCCCCCceeeeccC-----------------------------------------------C
Q psy17188        337 RIKAELTSSAPACYALAISPDSKSPFFSSHHY-----------------------------------------------K  369 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------------------------------~  369 (504)
                      .....++- ...+..++++|+.+...+++...                                               .
T Consensus       728 ~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  806 (1158)
T 3ei3_A          728 LHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEV  806 (1158)
T ss_dssp             EEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEE
T ss_pred             eeEEEEeC-CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceee
Confidence            22222222 23666777777666322222110                                               1


Q ss_pred             CeEEEEecCCCCCCCcccccccccCCCceEEEE---EcCC-CCEEEEee----------CCCcEEEeeCCCCCcceeecc
Q psy17188        370 SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK---LLPD-GRTLIVGG----------EASNLSIWDLASPTPRIKAEL  435 (504)
Q Consensus       370 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~---~s~~-g~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~  435 (504)
                      .++++.|-.+.+   .+.... ......+.+++   |..+ ..+|++|+          ..|.|++|++...+...... 
T Consensus       807 s~i~lidp~t~~---~i~~~~-l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~-  881 (1158)
T 3ei3_A          807 HNLLIIDQHTFE---VLHAHQ-FLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAE-  881 (1158)
T ss_dssp             EEEEEEETTTCC---EEEEEE-CCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEE-
T ss_pred             EEEEEEeCCCCe---EEEEEe-CCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEE-
Confidence            234455543221   111111 12233344444   3322 46888886          34779999987443333222 


Q ss_pred             cCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE
Q psy17188        436 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  475 (504)
Q Consensus       436 ~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  475 (504)
                      ....++|++++-- +|+ |++|- ..+|++|++...+.+.
T Consensus       882 ~~v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~  918 (1158)
T 3ei3_A          882 KEVKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELR  918 (1158)
T ss_dssp             EEESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEE
T ss_pred             EEcCCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEE
Confidence            2234567776633 354 44443 4679999998765443

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.48  E-value=9.1e-05  Score=66.39  Aligned_cols=230  Identities=10%  Similarity=0.076  Sum_probs=135.7

Q ss_pred             CCcEEEEECCCCe--EEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecc
Q psy17188        224 DGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ  300 (504)
Q Consensus       224 dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (504)
                      ...|+.++++...  ....+. ....+..++|.+.+. ++++-...+.|..+++..+...              ......
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~--------------~~~~~~   76 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--------------QNVVVS   76 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC--------------CEEEEE
T ss_pred             cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce--------------EEEEcC
Confidence            4678999988653  112222 223567889998544 4455556678888888765310              001111


Q ss_pred             cCCceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        301 RDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       301 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .-.....+++.+.+..| ++-...+.|.++++.......  ...........+++.|.+..+++.-.+..+.|..+++..
T Consensus        77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG  154 (318)
T 3sov_A           77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG  154 (318)
T ss_dssp             CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred             CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence            22346788998755544 444566789999987543222  222334467899999876653333323467788887754


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      .... .+.    ...-.....+++++++..|+.+. ..+.|..+|+.........  .........+++.. +.++.+-.
T Consensus       155 ~~~~-~~~----~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~-~~lywtd~  226 (318)
T 3sov_A          155 SSRF-III----NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFE-DILYWTDW  226 (318)
T ss_dssp             CSCE-EEE----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEET-TEEEEEET
T ss_pred             CCeE-EEE----ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeC-CEEEEEec
Confidence            2211 110    01233467999999777776664 4577999998754333222  22233456677753 34445555


Q ss_pred             CCCcEEEEEcCCcceEEEEe
Q psy17188        459 SDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       459 ~dg~i~iwd~~~~~~~~~~~  478 (504)
                      ..+.|..++..+|+....+.
T Consensus       227 ~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          227 STHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             TTTEEEEEETTTCCSCEEEE
T ss_pred             CCCeEEEEECCCCCceEEEe
Confidence            67889999988887665554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.45  E-value=0.00026  Score=63.37  Aligned_cols=230  Identities=8%  Similarity=0.038  Sum_probs=138.8

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCcCc
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPA  205 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~  205 (504)
                      +|+.+....|+.++++.......+. +   .......+++|.+.+..|... ...+.|..+++...... ..........
T Consensus         6 ~ll~~~~~~I~~i~l~~~~~~~~~~-~---~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~   80 (318)
T 3sov_A            6 LLLYANRRDLRLVDATNGKENATIV-V---GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLS   80 (318)
T ss_dssp             EEEEECEEEEEEEETTCTTSCCEEE-E---EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSC
T ss_pred             EEEEEccCeEEEEECCCCceEEEEE-e---cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCC
Confidence            5555566789999998653111111 1   122356789999865555544 46678999998765321 1122222234


Q ss_pred             eEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc--CCCeEEEEECCCCceEEE
Q psy17188        206 CYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       206 v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~  282 (504)
                      ...+++.+.+. +.++-...+.|.+++++.......+.........+++.|.+..|+...  ..+.|...+++.......
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~  160 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII  160 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence            56788887444 445555677899999875433333334455678999998655655554  357888888765432111


Q ss_pred             eecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCc
Q psy17188        283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP  361 (504)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  361 (504)
                                     ....-.....+++++++..|+.+ ...+.|..+|+........  ..........+++..+  . 
T Consensus       161 ---------------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~--~~~~~~~P~glav~~~--~-  220 (318)
T 3sov_A          161 ---------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED--I-  220 (318)
T ss_dssp             ---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSCCSCEEEEEEETT--E-
T ss_pred             ---------------EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE--ecCCCCCceEEEEeCC--E-
Confidence                           01123456899999977766665 4567899999875432222  1223345567777433  2 


Q ss_pred             eeeeccCCCeEEEEecCCCC
Q psy17188        362 FFSSHHYKSCVKVWDISQPG  381 (504)
Q Consensus       362 ~~~~~~~~~~i~i~d~~~~~  381 (504)
                      ++.+....+.|..++..++.
T Consensus       221 lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          221 LYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             EEEEETTTTEEEEEETTTCC
T ss_pred             EEEEecCCCeEEEEECCCCC
Confidence            66667777888888875543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.43  E-value=5.1e-06  Score=83.16  Aligned_cols=248  Identities=9%  Similarity=0.016  Sum_probs=138.5

Q ss_pred             CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      ....|+..++...+....+. ....+..++|.+.+..|+.+ ...+.|+.+++......       ...    .......
T Consensus       384 ~~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-------~~~----~~~i~~~  451 (699)
T 1n7d_A          384 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------SSY----DTVISRD  451 (699)
T ss_dssp             CTTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--------CCC----CCBCCSC
T ss_pred             CccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-------cce----EEEEeCC
Confidence            34678888888776655544 33456788999866666554 34578888887751100       000    0000111


Q ss_pred             CCceEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        302 DNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      ......+++.+.+..|+ +-...+.|.++++......  ............+++.|.+..++++-....+.|..+++...
T Consensus       452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~  529 (699)
T 1n7d_A          452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  529 (699)
T ss_dssp             C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred             CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence            12355688886544444 4455678999998754322  22222234567899999877644433333367777776542


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeC
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                      .......     ..-.....|+|+|++..|+.+ ...+.|..+++....................|++..+ .++++...
T Consensus       530 ~~~~l~~-----~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~  603 (699)
T 1n7d_A          530 DIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDII  603 (699)
T ss_dssp             CCCEESC-----SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred             CeeEEEe-----CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence            2111110     112345589999976666555 4556799999875443333222112222334466543 44455556


Q ss_pred             CCcEEEEEcCCcceEEEEeecCCceEEEEEc
Q psy17188        460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       460 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s  490 (504)
                      .+.|..++..+++.+..+.......+.|++.
T Consensus       604 ~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~  634 (699)
T 1n7d_A          604 NEAIFSANRLTGSDVNLLAENLLSPEDMVLF  634 (699)
T ss_dssp             TTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred             CCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence            7899999988888877775433334455443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.40  E-value=0.00038  Score=70.25  Aligned_cols=241  Identities=10%  Similarity=0.012  Sum_probs=140.9

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      +|+.+ ....|+..++........+. ....+..++|.+... ++++-...+.|+.+++.......         ..  .
T Consensus       397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~---------~~--~  463 (791)
T 3m0c_C          397 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---------SY--D  463 (791)
T ss_dssp             EEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------C--E
T ss_pred             ccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc---------ce--e
Confidence            44433 34568888887665544444 456678999998544 44555566788888887532100         00  1


Q ss_pred             ceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      ............|++.+.++.|+.+ ...+.|.+.++.....  .............|++.|....++++-.+..+.|..
T Consensus       464 ~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~  541 (791)
T 3m0c_C          464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK  541 (791)
T ss_dssp             EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred             EEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEE
Confidence            1111123456789999877655554 5567899999875432  222223334678999999877544443344477888


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      .++........+     ...-.....|++++.+..|+.+. ..+.|..+++....................|++.  +..
T Consensus       542 ~~~dG~~~~~lv-----~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~  614 (791)
T 3m0c_C          542 GGLNGVDIYSLV-----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDK  614 (791)
T ss_dssp             EETTSCCEEEEE-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTE
T ss_pred             EecCCCceEEEE-----eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCE
Confidence            887643211111     12234677999998777777664 4567999998755443333222222334556664  334


Q ss_pred             EEEe-eCCCcEEEEEcCCcceEEEEee
Q psy17188        454 CFSC-CSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       454 l~s~-~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      |+.+ ...+.|...+..+|+.+..+..
T Consensus       615 lYwtD~~~~~I~~~dk~tG~~~~~l~~  641 (791)
T 3m0c_C          615 VFWTDIINEAIFSANRLTGSDVNLLAE  641 (791)
T ss_dssp             EEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred             EEEEECCCCEEEEEeCCCCcceEEeec
Confidence            5444 4567888888888877666653

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.40  E-value=0.0005  Score=64.72  Aligned_cols=258  Identities=12%  Similarity=0.034  Sum_probs=143.3

Q ss_pred             ceEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeEEEeecCC---CCCeEEEEE-------ccCCCEEEEEcCCC-----
Q psy17188        205 ACYALAISP-DSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGH---TDGASCIDI-------SADGTKLWTGGLDN-----  267 (504)
Q Consensus       205 ~v~~~~~s~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~s~~~dg-----  267 (504)
                      ....|+|.| +...|+.+. ..+.|++.|++++........-   ......++|       +++++.|+.+...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            357899998 344455444 4467999999988776555432   235889999       99998666665543     


Q ss_pred             --eEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCC-------CCCc
Q psy17188        268 --TVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLA-------SPTP  336 (504)
Q Consensus       268 --~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~-------~~~~  336 (504)
                        .+.+++... +.+.        .......+.   .......++++|+ +.++++-..++.|..+|+.       ++..
T Consensus       220 ~~~V~~i~r~~~G~~~--------~~~~~~~v~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~  288 (496)
T 3kya_A          220 SPSVYIIKRNADGTFD--------DRSDIQLIA---AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS  288 (496)
T ss_dssp             EEEEEEEECCTTSCCS--------TTSCEEEEE---EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC
T ss_pred             CceEEEEecCCCCcee--------ecccceeec---cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCcee
Confidence              255565333 2210        000000111   1224567889994 5555566677889999987       4432


Q ss_pred             ------c----c-eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC----Cccccc-cc---------
Q psy17188        337 ------R----I-KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQL-DC---------  391 (504)
Q Consensus       337 ------~----~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~-~~---------  391 (504)
                            .    . .............++++|+++. ++++-.....|+.++.......    ..+.-. ..         
T Consensus       289 ~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~-lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~  367 (496)
T 3kya_A          289 WDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKY-AYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT  367 (496)
T ss_dssp             CCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSE-EEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG
T ss_pred             ecccccccccccceeEecCCCCCceEEEEcCCCCE-EEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc
Confidence                  0    0 1111122335678999999985 4566677888988765432110    000000 00         


Q ss_pred             ccCCCceE-EEEEc-------CCCCEEEEeeCCCcEEEeeCCCCCcceeeccc-----------C----------CCCce
Q psy17188        392 LQRDNYIR-SVKLL-------PDGRTLIVGGEASNLSIWDLASPTPRIKAELT-----------S----------SAPAC  442 (504)
Q Consensus       392 ~~~~~~i~-~~~~s-------~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------~----------~~~~v  442 (504)
                      ...-.... .++..       ++|.++++=..+..|+.++. ++......-..           +          .....
T Consensus       368 ~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P  446 (496)
T 3kya_A          368 EARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDV  446 (496)
T ss_dssp             GCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSE
T ss_pred             ccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCC
Confidence            00112233 44454       45666666566778999984 34221111100           0          11235


Q ss_pred             eEEEECCC-CCEEEEeeCCCcEEEEEcCCcceEE
Q psy17188        443 YALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVR  475 (504)
Q Consensus       443 ~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~  475 (504)
                      ..|+++++ +.++++=..+.+||.++++....+.
T Consensus       447 ~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~  480 (496)
T 3kya_A          447 SGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA  480 (496)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred             cEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence            67899886 6655555567889988887665543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.37  E-value=0.00014  Score=64.55  Aligned_cols=204  Identities=10%  Similarity=0.180  Sum_probs=121.2

Q ss_pred             CCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC----CCC---EEEEEeC---CCc
Q psy17188        256 DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP----DGR---TLIVGGE---ASN  325 (504)
Q Consensus       256 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~---~l~~~~~---dg~  325 (504)
                      ...+++.....+-+.+||+ +|+..                .... ...++.+..-|    .|+   ++++...   +++
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l----------------~~~~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~  100 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKML----------------HSYN-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT  100 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEE----------------EEEC-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEE----------------EEcc-CCCcccEEEecccccCCceEeEEEEeCCCCCCCe
Confidence            3456777777889999999 45422                1111 13345555444    222   2333433   478


Q ss_pred             EEEEeCCCCCccceeee-----c--cCCCceeeEEE--CCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccCC
Q psy17188        326 LSIWDLASPTPRIKAEL-----T--SSAPACYALAI--SPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQRD  395 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~-----~--~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~~  395 (504)
                      |.+|++...... ....     +  .....+..+++  ++.....+++....++.+..|++...... ............
T Consensus       101 l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg  179 (355)
T 3amr_A          101 IEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN  179 (355)
T ss_dssp             EEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred             EEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC
Confidence            999977422111 1112     1  11146677777  77655546777777899999998543211 122223333445


Q ss_pred             CceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC---cceeec--ccCCCCceeEEEE--CCCCC-EEEEee-CCCcEEEE
Q psy17188        396 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT---PRIKAE--LTSSAPACYALAI--SPDSK-VCFSCC-SDGNIAVW  466 (504)
Q Consensus       396 ~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~---~~~~~~--~~~~~~~v~~l~~--s~~~~-~l~s~~-~dg~i~iw  466 (504)
                      ..+..+...+....|+++-++..|..++.+...   ......  ...-...+..|++  .++++ +|++++ .+.++.+|
T Consensus       180 sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy  259 (355)
T 3amr_A          180 SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY  259 (355)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred             CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence            678899999988999999998777777754221   112222  2222235777777  55666 666666 57789999


Q ss_pred             EcC-CcceEEEEe
Q psy17188        467 DLH-NQTLVRQFQ  478 (504)
Q Consensus       467 d~~-~~~~~~~~~  478 (504)
                      |.+ +.+.+..+.
T Consensus       260 dr~~~~~~vg~f~  272 (355)
T 3amr_A          260 DRQGKNKYVADFR  272 (355)
T ss_dssp             ESSTTCCEEEEEE
T ss_pred             ECCCCCcEEEEEE
Confidence            997 677777774

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.37  E-value=0.0025  Score=62.77  Aligned_cols=353  Identities=13%  Similarity=0.066  Sum_probs=192.2

Q ss_pred             CcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCC
Q psy17188        114 EVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLAS  190 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~  190 (504)
                      ..+.+++|++.+..|..+.  ++.|..++++.... ..+  +.  ........+++.+.+..|+.+ ...+.|.+.+++.
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v--~~--~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG  111 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHV--VE--FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG  111 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE--EC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEE--Ee--CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence            4578999998655555443  78999999875321 111  11  122456789998766555444 4567899999875


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCC
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDN  267 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg  267 (504)
                      ....  ......-.....|++.|....|+....  .+.|...+++.......+. .-.....++++++++.|+.+ ...+
T Consensus       112 ~~~~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~  188 (628)
T 4a0p_A          112 QHRQ--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTN  188 (628)
T ss_dssp             TTCE--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTT
T ss_pred             CcEE--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCC
Confidence            4322  222233345689999986556665542  4678888876543333233 45577899999976666555 4567


Q ss_pred             eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-----
Q psy17188        268 TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----  342 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-----  342 (504)
                      .|...|+.....++.                .........+++.. +..+++-...+.|...|..+++.......     
T Consensus       189 ~I~~~d~dG~~~~v~----------------~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p  251 (628)
T 4a0p_A          189 LIESSNMLGLNREVI----------------ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYV  251 (628)
T ss_dssp             EEEEEETTSCSCEEE----------------EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSC
T ss_pred             EEEEEcCCCCceEEe----------------eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCc
Confidence            899999876543221                11123345677654 33344444467787777655432211110     


Q ss_pred             ------cc-----------CCCceeeEEE----------C-------CCCCC-----ceeeeccCCCeEEEEecCCCCCC
Q psy17188        343 ------TS-----------SAPACYALAI----------S-------PDSKS-----PFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       343 ------~~-----------~~~~i~~~~~----------~-------~~~~~-----~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                            ..           ..+.+..++.          +       ++++.     .+++. +....|+-..+......
T Consensus       252 ~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~-s~~~~i~~i~l~~~~~~  330 (628)
T 4a0p_A          252 MDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLF-SQKSAINRMVIDEQQSP  330 (628)
T ss_dssp             CEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEE-EETTEEEEECCCTTCCC
T ss_pred             ceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeee-eccceEEEEecccccCc
Confidence                  00           0001111111          1       11110     01111 11223433333321110


Q ss_pred             CcccccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCcceeecc--c--CCCCceeEEEECCCCCEEE-Ee
Q psy17188        384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL--T--SSAPACYALAISPDSKVCF-SC  457 (504)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~--~--~~~~~v~~l~~s~~~~~l~-s~  457 (504)
                      ..  .+ ....-..+..++|.+.+..|+.+. ..+.|+.++............  .  .....+..+++...++.|. +-
T Consensus       331 ~~--~l-~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td  407 (628)
T 4a0p_A          331 DI--IL-PIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTC  407 (628)
T ss_dssp             CE--EC-CCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEE
T ss_pred             eE--EE-EehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEc
Confidence            00  00 111234577899998777776654 356788888764332222211  0  1234578899998876555 55


Q ss_pred             eCCCcEEEEEcCCcceEEEEe-ecCCceEEEEEccCCCEE
Q psy17188        458 CSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKL  496 (504)
Q Consensus       458 ~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l  496 (504)
                      +..+.|.+.+++ |+....+. .......+|++.|...+|
T Consensus       408 ~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~l  446 (628)
T 4a0p_A          408 EATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYM  446 (628)
T ss_dssp             TTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEE
T ss_pred             CCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeE
Confidence            567889999985 55444443 334568899998843333

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.33  E-value=0.00021  Score=62.84  Aligned_cols=214  Identities=9%  Similarity=0.083  Sum_probs=124.6

Q ss_pred             CCCCeEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE---cCCCCEEEE
Q psy17188        244 HTDGASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL---LPDGRTLIV  319 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~  319 (504)
                      ...-..+++|++....|..++ ..++|..||...+......+.....        .......+..+.|   .|+++++++
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~--------~g~~~~~~sGl~~~~~D~~grL~vv   82 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS--------NGDGEQQMSGLSLLTHDNSKRLFAV   82 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCC--------SSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccc--------cCCCcceeeEEEEeccCCCCcEEEE
Confidence            344456789988555555555 7899999999866543221110000        0011223578999   688777775


Q ss_pred             Ee-------------CCCcEEEEeCC---CCCccceeeecc-----------CCCceeeEEECCCCCCceeeeccCC-Ce
Q psy17188        320 GG-------------EASNLSIWDLA---SPTPRIKAELTS-----------SAPACYALAISPDSKSPFFSSHHYK-SC  371 (504)
Q Consensus       320 ~~-------------~dg~i~v~d~~---~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~-~~  371 (504)
                      ..             .+..+..||+.   +++......+..           .......++..++|+  .+++++.. +.
T Consensus        83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn--aYVt~s~~~~~  160 (334)
T 2p9w_A           83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN--SYVAFALGMPA  160 (334)
T ss_dssp             EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC--EEEEEEESSCE
T ss_pred             EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC--EEEeCCCCCCe
Confidence            43             25779999998   666555444432           123578999999998  77777776 66


Q ss_pred             EEEEecCCCCCCCccccccc--ccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeeccc--C---CCCceeE
Q psy17188        372 VKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT--S---SAPACYA  444 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~~~v~~  444 (504)
                      |...+....  .........  .......+.++++|+|+.|++....|.|..+|+...... .....  +   .......
T Consensus       161 I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dg  237 (334)
T 2p9w_A          161 IARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEK  237 (334)
T ss_dssp             EEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEE
T ss_pred             EEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCccc
Confidence            555554422  111000010  112233669999999998888877999999998843220 11111  1   1122333


Q ss_pred             E-EECCCCCE-EEEeeCCCcEEEEEcCC
Q psy17188        445 L-AISPDSKV-CFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       445 l-~~s~~~~~-l~s~~~dg~i~iwd~~~  470 (504)
                      + ..-.+|+. |++....+.+.+.+.+.
T Consensus       238 ilp~~~~G~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          238 IVTVPVGNESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred             ccccccCCEEEEEEcCCCCEEEEECCCC
Confidence            3 33347777 44555566666665444

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.28  E-value=0.0011  Score=66.94  Aligned_cols=230  Identities=10%  Similarity=0.039  Sum_probs=137.8

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCc--cceeeeecCc
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTP--RIKAELTSSA  203 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~--~~~~~~~~~~  203 (504)
                      +|+......|+..++.....    ..+  ......+..++|.+....|+.+ ...+.|+.+++.....  .....+....
T Consensus       397 ~Ll~an~~~Ir~i~l~~~~~----~~l--~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l  470 (791)
T 3m0c_C          397 YLFFTNRHEVRKMTLDRSEY----TSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  470 (791)
T ss_dssp             EEEEECBSSEEEECTTSCCC----EEE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             ccccccccceeEeeccCCcc----eee--ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence            55555566788888765321    111  1345668899999865555544 4567788888875321  1122233233


Q ss_pred             CceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC--CCeEEEEECCCCceE
Q psy17188        204 PACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL--DNTVRSWDLREGCVK  280 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~  280 (504)
                      .....|++.+.+..|+ +-...+.|.+.+++.......+.........|++.|.+..|+....  .+.|.+.++.....+
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~  550 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  550 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence            4466788887665444 4456788999998865544444444556899999997556655542  267888888765432


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                      .+               ....-.....|++++.+..|+.+. ....|..+++..............-.....|++..+  
T Consensus       551 ~l---------------v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~--  613 (791)
T 3m0c_C          551 SL---------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--  613 (791)
T ss_dssp             EE---------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--
T ss_pred             EE---------------EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--
Confidence            21               112234678999998777776664 456799999876543333222222234456666333  


Q ss_pred             CceeeeccCCCeEEEEecCCC
Q psy17188        360 SPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       360 ~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      . ++++-...+.|...+..++
T Consensus       614 ~-lYwtD~~~~~I~~~dk~tG  633 (791)
T 3m0c_C          614 K-VFWTDIINEAIFSANRLTG  633 (791)
T ss_dssp             E-EEEEETTTTEEEEEETTTC
T ss_pred             E-EEEEECCCCEEEEEeCCCC
Confidence            2 6677777788887776544

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.25  E-value=0.00077  Score=61.39  Aligned_cols=239  Identities=12%  Similarity=0.114  Sum_probs=121.3

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee---cCcCceEEEEECCC---CCEEEEEeC-C-----CcE
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT---SSAPACYALAISPD---SKVCFSCCS-D-----GNI  227 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~~~v~~~~~s~~---~~~l~~~~~-d-----g~i  227 (504)
                      .....++|.|+|+++++ ..++.|.+++  +++......+.   ........++|+|+   +..|+++.. +     +.|
T Consensus        31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            34679999999985555 5569999998  33322111111   12345789999998   555554433 2     568


Q ss_pred             EEEECCCCe------EEEeec---CCCCCeEEEEEccCCCEEEEEcCC-------------CeEEEEECCCCceEEEeec
Q psy17188        228 AVWDLHNQT------LVRQFQ---GHTDGASCIDISADGTKLWTGGLD-------------NTVRSWDLREGCVKVWDIS  285 (504)
Q Consensus       228 ~iwd~~~~~------~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~~~~~~~~  285 (504)
                      ..++...++      .+..+.   ........++|.|||.+.++.+..             |.|..++.+. ++     .
T Consensus       108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~-----p  181 (352)
T 2ism_A          108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EP-----A  181 (352)
T ss_dssp             EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SB-----C
T ss_pred             EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CC-----C
Confidence            888876431      122233   111234689999999766664322             3455454432 10     0


Q ss_pred             CCCC----CCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCc--------EEEEeCCCCC----------------c
Q psy17188        286 QPGS----KTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASN--------LSIWDLASPT----------------P  336 (504)
Q Consensus       286 ~~~~----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~--------i~v~d~~~~~----------------~  336 (504)
                      ....    ........... ......++|+| +++++++-.....        |.+..  .+.                .
T Consensus       182 ~~npf~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~  258 (352)
T 2ism_A          182 PGNPFLGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYR  258 (352)
T ss_dssp             TTCTTTTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSC
T ss_pred             CCCcccCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCc
Confidence            0000    00000111111 23467889999 6665554332222        33332  221                0


Q ss_pred             cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC-cccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        337 RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT-PVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       337 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      .....+ ........+++ .++.  ++++....+.|...+++...... .............+..+++.|||.++++..
T Consensus       259 ~p~~~~-~~~~ap~G~~~-~~G~--l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          259 DPLYFW-PQGFPPGNLAF-FRGD--LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CCSEEC-TTCCCEEEEEE-ETTE--EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CCeEec-CCCCCCcceEE-ECCE--EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            111111 11224456666 3443  56666667777777776432110 000111112235688999999997666653

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.23  E-value=0.00065  Score=59.78  Aligned_cols=167  Identities=10%  Similarity=0.086  Sum_probs=115.2

Q ss_pred             CCCCceEEEEEccCCCEEEEec-CCCcEEEEeCCCCCccceeeeec----C--cCceEEEEE---CCCCCEEEEEe----
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTS----S--APACYALAI---SPDSKVCFSCC----  222 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~----~--~~~v~~~~~---s~~~~~l~~~~----  222 (504)
                      .....-.+++|.+....|..++ ..++|..|+...+..... .+..    .  ...+..+.|   .|+++++++..    
T Consensus        10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a   88 (334)
T 2p9w_A           10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS   88 (334)
T ss_dssp             CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred             CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence            3344556889988555555554 789999999875432222 2222    1  113579999   68877777543    


Q ss_pred             ---------CCCcEEEEECC---CCeEEEeecC-------------CCCCeEEEEEccCCCEEEEEcCC-CeEEEEECCC
Q psy17188        223 ---------SDGNIAVWDLH---NQTLVRQFQG-------------HTDGASCIDISADGTKLWTGGLD-NTVRSWDLRE  276 (504)
Q Consensus       223 ---------~dg~i~iwd~~---~~~~~~~~~~-------------h~~~v~~~~~~~~~~~l~s~~~d-g~i~~wd~~~  276 (504)
                               .+..|..+|+.   +++.+.....             -......++..++|+..++++.. +.|...+...
T Consensus        89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG  168 (334)
T 2p9w_A           89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG  168 (334)
T ss_dssp             TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred             ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence                     25779999999   7776654431             11347899999999999999888 8988888876


Q ss_pred             CceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy17188        277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  334 (504)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~  334 (504)
                      .....|....+.          .......+.|+++|+|+.|++....+.+..+|+...
T Consensus       169 ~~~~~~~~~~~~----------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          169 KTVSTFAWESGN----------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             CCEEEEEECCCC----------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             CEEeeeeecCCC----------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            666555443211          111233678999999999999877999999998843

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.23  E-value=0.0069  Score=61.71  Aligned_cols=355  Identities=10%  Similarity=0.040  Sum_probs=192.7

Q ss_pred             CCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC----CCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        113 GEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ----RDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      ...|.++....++++.+... +-+..++..+..    +.......    ....|.++...+++..|..|+. +-+..++.
T Consensus       145 ~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~  218 (758)
T 3ott_A          145 NNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGK----FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFP  218 (758)
T ss_dssp             CSCEEEEEECTTCCEEEEET-TEEEEEETTTTE----EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEET
T ss_pred             CCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCc----eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcC
Confidence            35688998888888777554 457778865531    11111101    1234888888877776555654 45888887


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEEEccCCCEEE
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISADGTKLW  261 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~  261 (504)
                      .+.+......+  ....|.++....++.+.+ |+.+ -+.+++..+++......       .....|.++....+|. |.
T Consensus       219 ~~~~~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW  293 (758)
T 3ott_A          219 STGQIKQTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IW  293 (758)
T ss_dssp             TTTEEEEEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EE
T ss_pred             CCCeEEeccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EE
Confidence            76543222222  234588888887776554 4444 58888887665432211       1234588888877775 45


Q ss_pred             EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188        262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  341 (504)
Q Consensus       262 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~  341 (504)
                      .|+..| +.++.. ......+...         ..........|.++.-..+|++ .+|+.+| +..++..++.......
T Consensus       294 iGT~~G-l~~~~~-~~~~~~~~~~---------~~~~~~~~~~v~~i~~D~~g~l-WiGt~~G-l~~~~~~~~~~~~~~~  360 (758)
T 3ott_A          294 LGTDYG-ISLSRY-NSALQFIPIS---------QITGTGDGNQFYSLFRDSKGFY-WFGGANG-LIRFTDPAGERHDAIW  360 (758)
T ss_dssp             EEESSS-EEEECC-CC-CEEEEHH---------HHSCSCCCCBEEEEEECTTCCE-EEEETTE-EEEESCTTSSCCCCEE
T ss_pred             EEeCCc-cccccc-CCceeEEecc---------cCCCCCCCceEEEEEEcCCCCE-EEeeCCc-ceeecccccccceeEE
Confidence            555566 544432 2222221110         0000112345888888888874 4455554 6666655422111111


Q ss_pred             ec-------cCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc--ccCCCceEEEEEcCCCCEEEE
Q psy17188        342 LT-------SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       342 ~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~  412 (504)
                      ..       .....|.++....++.  +.+ +. ++-+..||..+.... .......  ......|.++...++|+ |..
T Consensus       361 ~~~~~~~~~l~~~~v~~i~~d~~g~--lWi-gt-~~GL~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~d~~g~-lWi  434 (758)
T 3ott_A          361 YRMGDKTYPLSHNRIRHIYEDKEQQ--LWI-AT-DGSINRYDYATRQFI-HYNIVDNTGTYNTNWTYYIFEDTAGQ-LWI  434 (758)
T ss_dssp             ECTTCSSSCCSCSCEEEEEECTTSC--EEE-EE-TTEEEEEETTTTEEE-EEEEECCC--CBSSSEEEEEECTTSE-EEE
T ss_pred             eccCCcCCCCCCCceEEEEECCCCC--EEE-Ee-CCcHhhcCcCCCcEE-EeecCCCcCCCCCceEEEEEEcCCCC-EEE
Confidence            11       1123567777666665  333 33 346888887653211 1100000  01234578888887775 555


Q ss_pred             eeCCCcEEEeeCCCC-----Ccce---eec-cc-CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEee---
Q psy17188        413 GGEASNLSIWDLASP-----TPRI---KAE-LT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---  479 (504)
Q Consensus       413 ~~~dg~i~iwd~~~~-----~~~~---~~~-~~-~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---  479 (504)
                      |+..+-|.++|..+.     ....   ... .. -....|.++...++|++.+.++..+-|..+|.++++... +..   
T Consensus       435 gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~-~~~~~~  513 (758)
T 3ott_A          435 STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTK-LFADEL  513 (758)
T ss_dssp             EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEE-ECTTTS
T ss_pred             EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEE-ecCCCc
Confidence            666666888885421     1010   000 11 122358889999999877643334458889987765443 221   


Q ss_pred             -cCCceEEEEEccCCCEEEE
Q psy17188        480 -HTDGASCIDISADGTKLWT  498 (504)
Q Consensus       480 -h~~~v~~~~~s~d~~~l~s  498 (504)
                       ....+.++....+|+..+.
T Consensus       514 ~~~~~~~~i~~d~~g~lWig  533 (758)
T 3ott_A          514 TGEKSPNYLLCDEDGLLWVG  533 (758)
T ss_dssp             CGGGCEEEEEECTTSCEEEE
T ss_pred             CCCcccceEEECCCCCEEEE
Confidence             1235778887777766543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.21  E-value=0.0032  Score=57.17  Aligned_cols=267  Identities=11%  Similarity=0.205  Sum_probs=162.3

Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      .+.+|.|.|+..+...........     +.-.+|..+.++.-. ..++.|+|+++.+.+..+.- ...|.-=.|-.+. 
T Consensus        46 ~~~~vvIiDl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-  117 (494)
T 1bpo_A           46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-  117 (494)
T ss_dssp             TCCEEEEEETTSTTSCEEEECCCS-----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-
T ss_pred             CCCeEEEEECCCCCcceecccccc-----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-
Confidence            445799999987665433333322     345688888777665 67899999999999988874 4566666776544 


Q ss_pred             EEEEEcCCCeEEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188        259 KLWTGGLDNTVRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW  329 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~  329 (504)
                      .|+-.+ +..|+-|++...  -.++++...            .-....|..-..+++.++++..+       -.|.+.+|
T Consensus       118 ~l~lVT-~taVyHWsi~~~s~P~kvFdR~~------------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY  184 (494)
T 1bpo_A          118 TVALVT-DNAVYHWSMEGESQPVKMFDRHS------------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY  184 (494)
T ss_dssp             EEEEEC-SSEEEEEESSSSCCCEEEEECCG------------GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred             eEEEEc-CCeeEEecccCCCCchhheecch------------hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence            454444 568999999653  233332111            11246678888899999877543       23678999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCCc-eeeecc---CCCeEEEEecCCCC-CCCccc------ccccccCCCce
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKSP-FFSSHH---YKSCVKVWDISQPG-SKTPVS------QLDCLQRDNYI  398 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~---~~~~i~i~d~~~~~-~~~~~~------~~~~~~~~~~i  398 (504)
                      ..+..   ....+.+|...-..+.+..+.... +++-+.   ..+.+.+.++.... ....+.      .+.........
T Consensus       185 S~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP  261 (494)
T 1bpo_A          185 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP  261 (494)
T ss_dssp             ESTTC---CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE
T ss_pred             ecccc---ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCce
Confidence            98764   445556665444333333222111 222221   23789999986541 111111      01111234556


Q ss_pred             EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc
Q psy17188        399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~  471 (504)
                      .++..++.-..++.-+.-|.|++||+.++..+.......  ..|...+-..+..-++.....|.|.--.++..
T Consensus       262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~--~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~  332 (494)
T 1bpo_A          262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (494)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred             eEEEecccCCEEEEEecCceEEEEecccceeeeeecccC--CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence            689999988899999999999999999998776655443  33433344444444454556666655555443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.20  E-value=0.00063  Score=64.06  Aligned_cols=259  Identities=9%  Similarity=0.077  Sum_probs=137.2

Q ss_pred             ceEEEEEcc-CCCEEEEec-CCCcEEEEeCCCCCccceeeeec-CcCceEEEEE-------CCCCCEEEEEeCCC-c---
Q psy17188        161 YIRSVKLLP-DGRTLIVGG-EASNLSIWDLASPTPRIKAELTS-SAPACYALAI-------SPDSKVCFSCCSDG-N---  226 (504)
Q Consensus       161 ~v~~~~~s~-~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~-------s~~~~~l~~~~~dg-~---  226 (504)
                      ....|+|+| +...|+.+. ..+.|++.|++++.......... .......++|       +++++.|+++...+ .   
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            467899998 355555543 34678888887654322221111 2235789999       99999666665543 2   


Q ss_pred             ---EEEEECCC-CeEE-----EeecCCCCCeEEEEEcc-CCCEEEEEcCCCeEEEEECC-------CCce-EEEeecCCC
Q psy17188        227 ---IAVWDLHN-QTLV-----RQFQGHTDGASCIDISA-DGTKLWTGGLDNTVRSWDLR-------EGCV-KVWDISQPG  288 (504)
Q Consensus       227 ---i~iwd~~~-~~~~-----~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~-------~~~~-~~~~~~~~~  288 (504)
                         |.+++... ++..     ..+.. -.....++++| ++.++++-..++.|..+|+.       ++.+ ........+
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g  298 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN  298 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred             CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence               66665333 2211     11211 12345678888 45556666677889999987       4542 000000000


Q ss_pred             CCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccc--eeeecc---------------CCCcee
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRI--KAELTS---------------SAPACY  350 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~--~~~~~~---------------~~~~i~  350 (504)
                         ....+...........++|+|+|++|+++ .....|+.++........  ...+.+               .-....
T Consensus       299 ---~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~  375 (496)
T 3kya_A          299 ---TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC  375 (496)
T ss_dssp             ---TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred             ---ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence               00011112223456799999999965555 456678886654321111  001100               001223


Q ss_pred             -eEEEC-------CCCCCceeeeccCCCeEEEEecCCCCCCCcccc-------------------cccccCCCceEEEEE
Q psy17188        351 -ALAIS-------PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-------------------LDCLQRDNYIRSVKL  403 (504)
Q Consensus       351 -~~~~~-------~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------~~~~~~~~~i~~~~~  403 (504)
                       .+...       .++.  ++++-..+..|+.++.. + ....+.-                   ......-.....+++
T Consensus       376 ~gv~vd~~~~~~~~~g~--lyVaD~~N~rIr~i~~~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav  451 (496)
T 3kya_A          376 QGVFVKNPDYTGEEEYD--FYFVDRLNFCVRKVTPE-G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY  451 (496)
T ss_dssp             EEEEEECTTCCSSCCEE--EEEEEGGGTEEEEECTT-C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred             EEEEEccccccccCCCe--EEEEECCCCEEEEEeCC-C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence             34443       3333  77777778899998832 2 1111100                   000011234678999


Q ss_pred             cCC-CCEEEEeeCCCcEEEeeCCCC
Q psy17188        404 LPD-GRTLIVGGEASNLSIWDLASP  427 (504)
Q Consensus       404 s~~-g~~l~~~~~dg~i~iwd~~~~  427 (504)
                      +++ |.++++=..+..|+.++++..
T Consensus       452 d~~~g~lyVaD~~N~rIrki~~~~~  476 (496)
T 3kya_A          452 DDVKEMFYVHDQVGHTIRTISMEQE  476 (496)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECCC
T ss_pred             ECCCCEEEEEeCCCCEEEEEECCCC
Confidence            986 665555555677888887654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.19  E-value=0.0015  Score=58.10  Aligned_cols=185  Identities=15%  Similarity=0.287  Sum_probs=111.8

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccC----CCE--EEEe-c-C--CCcEEEEeCCCCCccce
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD----GRT--LIVG-G-E--ASNLSIWDLASPTPRIK  196 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--l~~~-~-~--dg~i~iw~~~~~~~~~~  196 (504)
                      +|.+.-++-+.+||++ ++   .+..+   . .+.++.+..-|+    |+.  |+.+ . .  +++|.+|++...... .
T Consensus        43 ii~t~k~~gL~Vydl~-G~---~l~~~---~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l  113 (355)
T 3amr_A           43 LITTNKKSGLVVYSLD-GK---MLHSY---N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L  113 (355)
T ss_dssp             EEEEETTTEEEEEETT-SC---EEEEE---C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred             EEEEcCCCCEEEEcCC-Cc---EEEEc---c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence            3444447899999994 32   22222   2 256677766662    322  3333 3 3  578999977422211 1


Q ss_pred             eeee-------cCcCceEEEEE--CCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        197 AELT-------SSAPACYALAI--SPD-SK-VCFSCCSDGNIAVWDLH-------NQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       197 ~~~~-------~~~~~v~~~~~--s~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      ..+.       .....+..+|+  +|. ++ ++++...+|.+..|++.       +.+.++++. ..+.+..+...+...
T Consensus       114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g  192 (355)
T 3amr_A          114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYG  192 (355)
T ss_dssp             EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTT
T ss_pred             eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCC
Confidence            1121       11145667777  774 44 68888889999999883       346778887 456788999998888


Q ss_pred             EEEEEcCCCeEEEEECCCCc---eEEEeecCCCCCCCcccceecccCCceEEEEE--cCCCC-EEEEEe-CCCcEEEEeC
Q psy17188        259 KLWTGGLDNTVRSWDLREGC---VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL--LPDGR-TLIVGG-EASNLSIWDL  331 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~-~dg~i~v~d~  331 (504)
                      .|+.+-++.-|..++.+...   ..+..           ..........+..+++  .++++ +|++++ .+..+.+||.
T Consensus       193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~-----------~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr  261 (355)
T 3amr_A          193 RLYIAEEDEAIWKFSAEPDGGSNGTVID-----------RADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR  261 (355)
T ss_dssp             EEEEEETTTEEEEEECSTTSCSCCEEEE-----------EBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred             eEEEecccceEEEEeCCcCCCCCceEEE-----------EecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence            99999998777777744211   11100           1111112235777777  55666 666666 5668999998


Q ss_pred             C
Q psy17188        332 A  332 (504)
Q Consensus       332 ~  332 (504)
                      +
T Consensus       262 ~  262 (355)
T 3amr_A          262 Q  262 (355)
T ss_dssp             S
T ss_pred             C
Confidence            6

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.15  E-value=0.0042  Score=56.48  Aligned_cols=241  Identities=14%  Similarity=0.096  Sum_probs=121.9

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEeec---CCCCCeEEEEEccC---CCEEEEEcC-C-----CeEE
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQ---GHTDGASCIDISAD---GTKLWTGGL-D-----NTVR  270 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~-d-----g~i~  270 (504)
                      ....++|.|+|++++ +..++.|.+++  +++.  +..+.   ........++++|+   +..|+.+.. +     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            457899999998554 55679999998  4432  22221   22456899999998   555554433 2     5777


Q ss_pred             EEECCCCceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCCCc
Q psy17188        271 SWDLREGCVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWDLASPTP  336 (504)
Q Consensus       271 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~~  336 (504)
                      .++...+.+......       +..+.. .........++|.|+|.+.++.+.             .|.|..++....-.
T Consensus       109 r~~~~~~~~~~~~~l-------~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p  181 (352)
T 2ism_A          109 RLRHLGERGVLDRVV-------LDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA  181 (352)
T ss_dssp             EEEECSSCEEEEEEE-------EEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred             EEEeCCCCcCceEEE-------EEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence            888765432100000       000000 011123468999999976555332             14566666543100


Q ss_pred             ----------cceeeeccCCCceeeEEECCCCCCceeeeccCCC-------eEEEEecCCCCCC----------C--ccc
Q psy17188        337 ----------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-------CVKVWDISQPGSK----------T--PVS  387 (504)
Q Consensus       337 ----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~i~i~d~~~~~~~----------~--~~~  387 (504)
                                ...............++|.|+...++++-.+.+.       .|.+.  ..+...          .  ...
T Consensus       182 ~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~  259 (352)
T 2ism_A          182 PGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRD  259 (352)
T ss_dssp             TTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCC
T ss_pred             CCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcC
Confidence                      0000111112246788999954443333333332       23332  222100          0  000


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce----eecccCCCCceeEEEECCCCCEEEEee
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI----KAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      .............++| .+|.++++.-..+.|...+++......    ...+......+..+++.|||.++++..
T Consensus       260 p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          260 PLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            1111122234567777 466666665566678777776433210    111112234678899999998777654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.13  E-value=0.0022  Score=58.30  Aligned_cols=239  Identities=15%  Similarity=0.120  Sum_probs=122.3

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee---ecCcCceEEEEECCC---CCEEEEEeC----C----C
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---TSSAPACYALAISPD---SKVCFSCCS----D----G  225 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~s~~---~~~l~~~~~----d----g  225 (504)
                      .....++|.|+|+++++ ..++.|++++. +++ .....+   .........|+++|+   +..|+++..    +    .
T Consensus        29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            45679999999985555 55699999873 333 222211   112345789999997   445554433    2    5


Q ss_pred             cEEEEECCCC-------eEE-EeecC-CCCCeEEEEEccCCCEEEEEcCC-------------CeEEEEECCCCceEEEe
Q psy17188        226 NIAVWDLHNQ-------TLV-RQFQG-HTDGASCIDISADGTKLWTGGLD-------------NTVRSWDLREGCVKVWD  283 (504)
Q Consensus       226 ~i~iwd~~~~-------~~~-~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~~~~~~  283 (504)
                      .|..|+....       +.+ ..+.. .......+.|.|||.++++.+..             |.|..++.+.. +    
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~-~----  180 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR-P----  180 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC-C----
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC-C----
Confidence            6777877654       111 11221 11234679999999876664432             34444443321 0    


Q ss_pred             ecCCCCCCCc--ccceecccCCceEEEEEcC-CCCEEEEEeCCC---cEEEEeCCC--------CC------ccceeeec
Q psy17188        284 ISQPGSKTPV--SQLDCLQRDNYIRSVKLLP-DGRTLIVGGEAS---NLSIWDLAS--------PT------PRIKAELT  343 (504)
Q Consensus       284 ~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~v~d~~~--------~~------~~~~~~~~  343 (504)
                         + ...+.  ..+.... ......++|+| +++++++-....   .|.+.....        ..      ........
T Consensus       181 ---p-~~npf~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~  255 (354)
T 3a9g_A          181 ---P-ADNPFPNSPIWSYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG  255 (354)
T ss_dssp             ---C-TTSSSTTCCEEEEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred             ---C-CCCCCCCCcEEEEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC
Confidence               0 00000  0111112 23356899999 666544432221   243332111        00      01111221


Q ss_pred             cCCCceeeEEEC-------CCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEee
Q psy17188        344 SSAPACYALAIS-------PDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  414 (504)
Q Consensus       344 ~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~  414 (504)
                      ........+++.       .++.  ++++....+.|...++...........+ .......+..+++.|||.+.++..
T Consensus       256 ~~~~ap~G~~~y~g~~fp~~~G~--l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          256 SETWAPSGASFVHGDMFPGLRGW--LLIACLRGSMLAAVNFGDNMEVRKISTF-FKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             TCCCCEEEEEECCSSSCGGGTTE--EEEEETTTTEEEEEEECGGGCEEEEEEE-CTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CCCcCCcceEEECCCCCcccCCc--EEEEEcCCCEEEEEEECCCCcccceeee-ccCCCCCeeEEEECCCCcEEEEEe
Confidence            123356777774       3343  6666666778888887643211101111 111245688999999997666653

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.12  E-value=0.011  Score=60.09  Aligned_cols=385  Identities=12%  Similarity=0.081  Sum_probs=205.0

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccceee--ecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINT--LSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT  148 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~  148 (504)
                      ...|.++.-..+|.+- ++. .+.+..++-.. .+....  ......|.++....++.+.+...+ -+..||..+..-..
T Consensus        21 ~n~V~~I~qD~~G~lW-igT-~~GL~ryDG~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~-Gl~~yd~~~~~f~~   96 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIW-IGS-NKGLFSYDGYS-TQQHFTYGENNNTRIYCGVIIDNTYLYMGTDN-GILVYNYRADRYEQ   96 (758)
T ss_dssp             CCCEEEEEECTTSCEE-EEE-SSCEEEECSSC-EEECSCTTSTTSSCEEEEEEETTTEEEEEETT-EEEEEETTTTEECC
T ss_pred             cceEEEEEECCCCCEE-EEE-CCCccccCCCc-eEEEEccCCCCCceEEEEEEcCCCcEEEEeCC-CeEEEeCCCCEEEC
Confidence            3457777776666433 222 23444443211 011100  112456899888888876665544 57889976632111


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee--ecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL--TSSAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      .     .......|.++.. .++ .|..++.+ .|..++..+.+.......  ......|.++....++.+.+ ++.+ -
T Consensus        97 ~-----~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-G  166 (758)
T 3ott_A           97 P-----ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-G  166 (758)
T ss_dssp             C-----SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-E
T ss_pred             c-----ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-C
Confidence            0     0012345777754 355 45556555 688888775442211000  11234588888887776555 4444 4


Q ss_pred             EEEEECCCCeEEEee-cC----CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        227 IAVWDLHNQTLVRQF-QG----HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       227 i~iwd~~~~~~~~~~-~~----h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      |..++..+++..... ..    ....|.++...+++..|..++. +-+..+|..+++...+.           .    ..
T Consensus       167 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-----------~----l~  230 (758)
T 3ott_A          167 LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-----------A----FH  230 (758)
T ss_dssp             EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-----------E----EE
T ss_pred             HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-----------C----CC
Confidence            788898777643221 11    1234788888777766555654 45888998877653221           0    11


Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee-----ccCCCceeeEEECCCCCCceeeeccCCCeEEEEe
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL-----TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      ...|.++....+|.+.+ |+.+ -+.+++..+.........     .-....|.++....++.   +..+...| +.++.
T Consensus       231 ~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~---lWiGT~~G-l~~~~  304 (758)
T 3ott_A          231 NNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN---IWLGTDYG-ISLSR  304 (758)
T ss_dssp             EEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC---EEEEESSS-EEEEC
T ss_pred             CCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC---EEEEeCCc-ccccc
Confidence            34588888888887544 4544 477888765432211111     01223577777776665   33333445 44443


Q ss_pred             cCCCCCCCcccc--cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc--eeecc-----cCCCCceeEEEE
Q psy17188        377 ISQPGSKTPVSQ--LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKAEL-----TSSAPACYALAI  447 (504)
Q Consensus       377 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~--~~~~~-----~~~~~~v~~l~~  447 (504)
                      ...  .......  .........|.++.-..+|.+.+ |+.+| +..++..++...  .....     .-....|.++.-
T Consensus       305 ~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~  380 (758)
T 3ott_A          305 YNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYE  380 (758)
T ss_dssp             CCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEE
T ss_pred             cCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEE
Confidence            211  1111100  00011234688888888887544 44554 666765543211  11111     112235888888


Q ss_pred             CCCCCEEEEeeCCCcEEEEEcCCcceEEEEe-e-----cCCceEEEEEccCCCEEE
Q psy17188        448 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-G-----HTDGASCIDISADGTKLW  497 (504)
Q Consensus       448 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-----h~~~v~~~~~s~d~~~l~  497 (504)
                      ..++++.+ |+. +-+..||.++++...-.. .     ....|.++.-..+|+..+
T Consensus       381 d~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi  434 (758)
T 3ott_A          381 DKEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI  434 (758)
T ss_dssp             CTTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE
T ss_pred             CCCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE
Confidence            88887655 444 469999988775432211 1     123578888777765444

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.07  E-value=0.00065  Score=60.48  Aligned_cols=107  Identities=13%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             CCCEEEEec-CC-----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCe--
Q psy17188        170 DGRTLIVGG-EA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT--  236 (504)
Q Consensus       170 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~--  236 (504)
                      ++..++.|+ .+     ..+.+||+.+.+......+.........+.  .++.+++.|+.+     ..+.+||+.+.+  
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~   91 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG   91 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence            455666666 32     368899988765433332222211122222  256677777754     468999988765  


Q ss_pred             ---EEEeecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceE
Q psy17188        237 ---LVRQFQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVK  280 (504)
Q Consensus       237 ---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~  280 (504)
                         .+..+.........+.+  +++.++.|+.+     ..+.+||+.+.+..
T Consensus        92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~  141 (301)
T 2vpj_A           92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS  141 (301)
T ss_dssp             CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence               23222222222222222  56677777654     36888998887754

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.07  E-value=5.4e-05  Score=75.79  Aligned_cols=227  Identities=11%  Similarity=0.002  Sum_probs=127.5

Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEEECCC----CeEEEeecCCCCCeEEEEEc
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHN----QTLVRQFQGHTDGASCIDIS  254 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~  254 (504)
                      .+.|+..++...+...  .+ .....+..++|.+.+..|+.+. ..+.|+.+++..    ......+.........|++.
T Consensus       385 ~~~I~~id~~~~~~~~--~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD  461 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTS--LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  461 (699)
T ss_dssp             TTC-CEECTTSCCEEC--CS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred             ccceEEEeCCCCccee--ee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence            4577778877544221  11 1223456789998766666554 457899999875    22222222222345667887


Q ss_pred             cC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--CCcEEEEeC
Q psy17188        255 AD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDL  331 (504)
Q Consensus       255 ~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~  331 (504)
                      +. ++++++-...+.|.++++........               ..........++++|.+.+|+.+..  .+.|.++++
T Consensus       462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l---------------~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~  526 (699)
T 1n7d_A          462 WIHSNIYWTDSVLGTVSVADTKGVKRKTL---------------FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL  526 (699)
T ss_dssp             CSSSBCEECCTTTSCEEEEBSSSCCEEEE---------------CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred             eeCCcEEEEeccCCeEEEEecCCCceEEE---------------EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence            54 44445545667899998876543221               0111234577889987666665543  267888777


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ........  ..........|+++++++. ++++-...+.|..+++...........   .........+++..+ .+++
T Consensus       527 dG~~~~~l--~~~~l~~PnGlavd~~~~~-LY~aD~~~~~I~~~d~dG~~~~~~~~~---~~~~~~P~glavd~~-~lyw  599 (699)
T 1n7d_A          527 NGVDIYSL--VTENIQWPNGITLDLLSGR-LYWVDSKLHSISSIDVNGGNRKTILED---EKRLAHPFSLAVFED-KVFW  599 (699)
T ss_dssp             SSCCCCEE--SCSSCSSCCCEEECTTTCC-EEEEETTTTEEEEECSSSSCCEEECCC---SSSCSSCCCCEEETT-EEEE
T ss_pred             CCCCeeEE--EeCCCCCccEEEEeccCCE-EEEEecCCCeEEEEccCCCceEEEEec---CCcCCCceEeEEECC-EEEE
Confidence            54322211  1122335678999998776 556666788999999864322111110   011122335566544 3444


Q ss_pred             EeeCCCcEEEeeCCCCCcce
Q psy17188        412 VGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~  431 (504)
                      +....+.|..++..+++...
T Consensus       600 td~~~~~V~~~d~~~G~~~~  619 (699)
T 1n7d_A          600 TDIINEAIFSANRLTGSDVN  619 (699)
T ss_dssp             ECSTTTCEEEEETTTEEEEE
T ss_pred             EeCCCCeEEEEEccCCCceE
Confidence            55566789999877665433

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=98.04  E-value=0.0093  Score=56.17  Aligned_cols=106  Identities=11%  Similarity=0.122  Sum_probs=62.9

Q ss_pred             CceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeec------CcCceEEEEECCC---CCEEEEEeC-------
Q psy17188        160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS------SAPACYALAISPD---SKVCFSCCS-------  223 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~s~~---~~~l~~~~~-------  223 (504)
                      .....|+|.|+|+++++-...+.|++++..+++......+..      .......|+|+|+   +..|+....       
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            456799999999977776544578888765444322222221      2455779999995   455554432       


Q ss_pred             ------CCcEEEEECCCC-------eEEE-eecC-CCCCeEEEEEccCCCEEEEEcC
Q psy17188        224 ------DGNIAVWDLHNQ-------TLVR-QFQG-HTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       224 ------dg~i~iwd~~~~-------~~~~-~~~~-h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                            ...|.-+++..+       +.+. .+.. .......|.|.|||.+.++.+.
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                  134655655321       1111 1221 1234689999999987776553

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.02  E-value=0.0077  Score=54.75  Aligned_cols=243  Identities=13%  Similarity=0.072  Sum_probs=125.1

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEeec---CCCCCeEEEEEccC---CCEEEEEcC----C----Ce
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQ---GHTDGASCIDISAD---GTKLWTGGL----D----NT  268 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~----d----g~  268 (504)
                      .....++|.|++++ +++..+|.|++++ .+++ .+..+.   ........|+++|+   +..|+.+..    +    ..
T Consensus        29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTEE-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            34678999999974 4456679999997 4454 222221   22356889999997   445554432    3    56


Q ss_pred             EEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCC
Q psy17188        269 VRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWDLAS  333 (504)
Q Consensus       269 i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~  333 (504)
                      |..|+...+  .+.....       .+..+. .........++|.|+|.+.++.+.             .|.|..++...
T Consensus       107 v~r~~~~~~~~~~~~~~~-------l~~~~~-~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG  178 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKT-------LIDGIP-GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG  178 (354)
T ss_dssp             EEEEEECSSSCCEEEEEE-------EEEEEE-CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred             EEEEEECCCCcCcCccEE-------EEEcCC-CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence            777776654  1110000       000011 011123467999999986665432             24566665542


Q ss_pred             CCcc-----ceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEEEEecCCCCC-----------C-Ccccccccc-c
Q psy17188        334 PTPR-----IKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVKVWDISQPGS-----------K-TPVSQLDCL-Q  393 (504)
Q Consensus       334 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~-----------~-~~~~~~~~~-~  393 (504)
                      .-..     ..............++|.|+...++++-...+.  .|.+..  .+..           . ......... .
T Consensus       179 ~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~  256 (354)
T 3a9g_A          179 RPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGS  256 (354)
T ss_dssp             CCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred             CCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCC
Confidence            2000     001111112246789999944432333323222  233322  1110           0 000011111 1


Q ss_pred             CCCceEEEEEc-------CCCCEEEEeeCCCcEEEeeCCCC-Ccceeec-ccCCCCceeEEEECCCCCEEEEee
Q psy17188        394 RDNYIRSVKLL-------PDGRTLIVGGEASNLSIWDLASP-TPRIKAE-LTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       394 ~~~~i~~~~~s-------~~g~~l~~~~~dg~i~iwd~~~~-~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                      .......++|.       .+|.++++.-..+.|...++... +...... +......+..+++.|||.+.++..
T Consensus       257 ~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          257 ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            23456788884       46777776666777888888743 2211112 222245688899999998766654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.02  E-value=0.0012  Score=58.70  Aligned_cols=106  Identities=15%  Similarity=0.198  Sum_probs=57.1

Q ss_pred             CCEEEEecCC----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEe-
Q psy17188        171 GRTLIVGGEA----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ-  240 (504)
Q Consensus       171 ~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~-  240 (504)
                      +..++.|+.+    ..+.+||+.+.+......+......-..+.+  ++.+++.|+.+     ..+.+||..+.+-... 
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~   93 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA   93 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence            4455555533    3588888877654332222221111122222  66677777754     3588999988754332 


Q ss_pred             -ecCCCCCeEEEEEccCCCEEEEEcCCC-----eEEEEECCCCceE
Q psy17188        241 -FQGHTDGASCIDISADGTKLWTGGLDN-----TVRSWDLREGCVK  280 (504)
Q Consensus       241 -~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~  280 (504)
                       +.........+.+  +++.++.|+.++     .+.+||+.+.+..
T Consensus        94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~  137 (302)
T 2xn4_A           94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF  137 (302)
T ss_dssp             CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred             CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence             2211112222222  566777777653     5778888887654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=98.01  E-value=0.0023  Score=56.98  Aligned_cols=232  Identities=11%  Similarity=0.101  Sum_probs=117.9

Q ss_pred             CEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEe--ecC
Q psy17188        172 RTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD----GNIAVWDLHNQTLVRQ--FQG  243 (504)
Q Consensus       172 ~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~--~~~  243 (504)
                      .+++.|+.  ...+.+||..+.+......+......-..+.+  ++.+++.|+.+    ..+.+||+.+.+-...  +..
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~   90 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT   90 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence            34555553  35789999887665433333222222222332  66677777754    5688999988754332  221


Q ss_pred             CCCCeEEEEEccCCCEEEEEcCC------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEE
Q psy17188        244 HTDGASCIDISADGTKLWTGGLD------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL  317 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  317 (504)
                      .......+.+  ++++++.|+.+      ..+.+||+.+.+.....   .        ..  ........+.+  +++.+
T Consensus        91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~--------~p--~~r~~~~~~~~--~~~iy  153 (306)
T 3ii7_A           91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---S--------ML--TQRCSHGMVEA--NGLIY  153 (306)
T ss_dssp             CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE--TTEEE
T ss_pred             cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---C--------Cc--CCcceeEEEEE--CCEEE
Confidence            1112222222  56677777765      46889999888654321   0        00  00011112222  56666


Q ss_pred             EEEeC---------CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCCCCCC
Q psy17188        318 IVGGE---------ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQPGSK  383 (504)
Q Consensus       318 ~~~~~---------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~  383 (504)
                      +.|+.         ...+.+||..+.+......+.........+.+  +++  +++.|+.+     ..+.+||..+..-.
T Consensus       154 v~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--i~v~GG~~~~~~~~~~~~yd~~~~~W~  229 (306)
T 3ii7_A          154 VCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDK--IFAVGGQNGLGGLDNVEYYDIKLNEWK  229 (306)
T ss_dssp             EECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE--EEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred             EECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCE--EEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence            66643         34588999988765444333322212222222  333  55555543     45788888654211


Q ss_pred             CcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCCcce
Q psy17188        384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPRI  431 (504)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~~~~  431 (504)
                      . +....  ........+.+  ++++++.|+.+     ..+.+||+.+.+...
T Consensus       230 ~-~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~  277 (306)
T 3ii7_A          230 M-VSPMP--WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA  277 (306)
T ss_dssp             E-CCCCS--CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred             E-CCCCC--CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence            0 00000  01111122223  67777888754     458888888654433

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.98  E-value=0.0036  Score=55.59  Aligned_cols=187  Identities=17%  Similarity=0.237  Sum_probs=98.1

Q ss_pred             CCCEEEEecCC-----CcEEEEeCCCCC---ccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCe
Q psy17188        170 DGRTLIVGGEA-----SNLSIWDLASPT---PRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT  236 (504)
Q Consensus       170 ~~~~l~~~~~d-----g~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~  236 (504)
                      +++.++.|+.+     ..+.+||+.+.+   ......+......-..+.+  ++++++.|+.+     ..+.+||+.+.+
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~  139 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ  139 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence            67777777754     469999998776   4433333322222222333  56677777643     358899988775


Q ss_pred             EEEe--ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      -...  +.........+.+  +++.++.|+.+     ..+.+||+.+.+.....   +        ..  ........+.
T Consensus       140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~--------~p--~~r~~~~~~~  204 (301)
T 2vpj_A          140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT---P--------MA--TKRSGAGVAL  204 (301)
T ss_dssp             EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEE
T ss_pred             EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC---C--------CC--cccccceEEE
Confidence            4332  2211111222222  56677777754     46889999888654321   0        00  0001112222


Q ss_pred             EcCCCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCC
Q psy17188        310 LLPDGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQ  379 (504)
Q Consensus       310 ~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~  379 (504)
                      +  +++.++.|+.+     ..+.+||+.+.+......+.........+.+  +++  +++.++.+     ..+.+||.++
T Consensus       205 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--i~v~GG~~~~~~~~~v~~yd~~~  278 (301)
T 2vpj_A          205 L--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR--LYAIAGYDGNSLLSSIECYDPII  278 (301)
T ss_dssp             E--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE--EEEECCBCSSSBEEEEEEEETTT
T ss_pred             E--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE--EEEEcCcCCCcccccEEEEcCCC
Confidence            2  56677777653     4689999988765544333322222222222  333  55555443     3466666654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.97  E-value=0.0067  Score=53.95  Aligned_cols=228  Identities=10%  Similarity=0.116  Sum_probs=117.7

Q ss_pred             EEEEEeC--CCcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCC
Q psy17188        217 VCFSCCS--DGNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPG  288 (504)
Q Consensus       217 ~l~~~~~--dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~  288 (504)
                      +++.|+.  ...+.+||..+++-...  +.........+.  -++.+++.|+.+    ..+.+||+.+++......    
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~----   87 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG----   87 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC----
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC----
Confidence            4555554  35799999988764432  221111222222  256677777755    578889998886543210    


Q ss_pred             CCCCcccceecccCCceEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCce
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPF  362 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  362 (504)
                             ..  ........+.+  +++.++.|+.+      ..+.+||..+.+......+.........+.  -+++  +
T Consensus        88 -------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~--i  152 (306)
T 3ii7_A           88 -------PP--TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGL--I  152 (306)
T ss_dssp             -------CS--SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE--E
T ss_pred             -------CC--ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCE--E
Confidence                   00  00111122222  56677777654      458899998876544433332221212222  2333  5


Q ss_pred             eeeccC---------CCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCC
Q psy17188        363 FSSHHY---------KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPT  428 (504)
Q Consensus       363 ~~~~~~---------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~  428 (504)
                      ++.++.         ...+.+||..+..-    ...........-..++.. ++++++.|+.+     ..+.+||+.+.+
T Consensus       153 yv~GG~~~~~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~  227 (306)
T 3ii7_A          153 YVCGGSLGNNVSGRVLNSCEVYDPATETW----TELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE  227 (306)
T ss_dssp             EEECCEESCTTTCEECCCEEEEETTTTEE----EEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred             EEECCCCCCCCcccccceEEEeCCCCCeE----EECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence            555543         34578888765421    111111111111122222 66777777654     358999998765


Q ss_pred             cceeecccCCCCceeEEEECCCCCEEEEeeCC-----CcEEEEEcCCcc
Q psy17188        429 PRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT  472 (504)
Q Consensus       429 ~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~  472 (504)
                      ................+.+  ++++++.|+.+     ..+.+||..+.+
T Consensus       228 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          228 WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            4433333322222233333  67778888754     468899988764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.97  E-value=0.0026  Score=56.75  Aligned_cols=233  Identities=13%  Similarity=0.149  Sum_probs=116.3

Q ss_pred             CCCEEEEecC----CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----C-----CcEEEEECCCCe
Q psy17188        170 DGRTLIVGGE----ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----D-----GNIAVWDLHNQT  236 (504)
Q Consensus       170 ~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~iwd~~~~~  236 (504)
                      ++..++.|+.    -..+.+||..+.+......+......-..+.+  ++.+++.|+.    +     ..+.+||+.+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            5666666663    23588888887654333222221111122222  5667777665    2     468999998876


Q ss_pred             EEEe--ecCCCCCeEEEEEccCCCEEEEEcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        237 LVRQ--FQGHTDGASCIDISADGTKLWTGGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       237 ~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      -...  +.........+.+  ++++++.|+.+     ..+.+||+.+.+.....   +        ..  ........+.
T Consensus       102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~  166 (308)
T 1zgk_A          102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA---P--------ML--TRRIGVGVAV  166 (308)
T ss_dssp             EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECC---C--------CS--SCCBSCEEEE
T ss_pred             EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECC---C--------CC--ccccceEEEE
Confidence            4332  1111112222222  56677776644     36888998887643221   0        00  0011112222


Q ss_pred             EcCCCCEEEEEeCC-----CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCC-----CeEEEEecCC
Q psy17188        310 LLPDGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYK-----SCVKVWDISQ  379 (504)
Q Consensus       310 ~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~  379 (504)
                      +  +++.++.|+.+     ..+.+||..+.+......+.........+.+  +++  +++.++.+     ..+.+||+.+
T Consensus       167 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~--iyv~GG~~~~~~~~~v~~yd~~~  240 (308)
T 1zgk_A          167 L--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNC--IYAAGGYDGQDQLNSVERYDVET  240 (308)
T ss_dssp             E--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE--EEEECCBCSSSBCCCEEEEETTT
T ss_pred             E--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCE--EEEEeCCCCCCccceEEEEeCCC
Confidence            2  56667776544     4589999987755444333322222222222  333  55666543     5688898865


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-----CcEEEeeCCCCCcc
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPTPR  430 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~iwd~~~~~~~  430 (504)
                      ..-.    ..........-..++. -++++++.|+.+     ..+.+||+.+.+..
T Consensus       241 ~~W~----~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  291 (308)
T 1zgk_A          241 ETWT----FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS  291 (308)
T ss_dssp             TEEE----ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             CcEE----ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence            4211    1100111111112222 256777777654     34778888765433

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.94  E-value=0.0016  Score=58.69  Aligned_cols=192  Identities=15%  Similarity=0.181  Sum_probs=113.0

Q ss_pred             ceEEEEEcCCCCEEEEE------------eCCCcEEEEeCCCCCcc-ceeeecc-----CCCceeeEEECC--CCCCcee
Q psy17188        304 YIRSVKLLPDGRTLIVG------------GEASNLSIWDLASPTPR-IKAELTS-----SAPACYALAISP--DSKSPFF  363 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~------------~~dg~i~v~d~~~~~~~-~~~~~~~-----~~~~i~~~~~~~--~~~~~~~  363 (504)
                      ....+...|+|..++++            ..+|.|.++|.++.... ....+..     .......+.+.+  ++...++
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            35667788877554444            26899999998743222 1222222     234666777766  3443344


Q ss_pred             eeccC--CCeEEEEecCCCCCCCcc-cccccccCCCceEEEEEcCCCCEEEEeeC-----------------CCcEEEee
Q psy17188        364 SSHHY--KSCVKVWDISQPGSKTPV-SQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----------------ASNLSIWD  423 (504)
Q Consensus       364 ~~~~~--~~~i~i~d~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-----------------dg~i~iwd  423 (504)
                      ++...  +..+.+|+++........ .... ...-...+.+++.++|.+.++...                 .|.|+-+|
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~-g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d  209 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIR-HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  209 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEEC-CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccc-cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence            44333  578889888764322211 1111 123456789999999987776541                 23455555


Q ss_pred             CCCCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEcCC-cce--EEEEeecCCceEEEEEcc-CCCEEEE
Q psy17188        424 LASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHN-QTL--VRQFQGHTDGASCIDISA-DGTKLWT  498 (504)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~~~~s~-d~~~l~s  498 (504)
                      .  ++....   .......+.++|+||++.|..+. ..+.|+.|++.. ++.  ...+ ...+..-.+++.+ +|++.++
T Consensus       210 ~--~~~~~~---~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          210 P--NDVRVV---AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             T--TCCEEE---EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred             C--CeEEEe---ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence            4  222211   12223467889999999887665 468899999863 433  2233 2345677899999 5988776


Q ss_pred             ecCC
Q psy17188        499 GGLD  502 (504)
Q Consensus       499 ~s~D  502 (504)
                      +..+
T Consensus       284 ~~~~  287 (355)
T 3sre_A          284 CHPN  287 (355)
T ss_dssp             EESC
T ss_pred             ecCC
Confidence            6543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.94  E-value=0.0058  Score=55.57  Aligned_cols=245  Identities=12%  Similarity=0.131  Sum_probs=122.0

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-------CCCCCeEEEEEccC---CCEEEEEc-C-------C
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISAD---GTKLWTGG-L-------D  266 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~---~~~l~s~~-~-------d  266 (504)
                      ....|+|.|+++.|+++...|.|++++. +++....+.       ........++++|+   +..|+... .       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            3678999999983445567899999985 343321111       12346789999995   44454432 2       2


Q ss_pred             CeEEEEECCCC--ceEEEeecCCCCCCCccccee-cccCCceEEEEEcCCCCEEEEEeC-------------CCcEEEEe
Q psy17188        267 NTVRSWDLREG--CVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGE-------------ASNLSIWD  330 (504)
Q Consensus       267 g~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d  330 (504)
                      ..|..+++..+  .+...+..       +..+.. .........++|.|+|.+.++.+.             .|.|..++
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i-------~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~  170 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTV-------FRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT  170 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEE-------EECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred             eEEEEEEECCCCCCCCceEEE-------EEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence            35666666533  11100000       000000 011122467999999965555433             24577776


Q ss_pred             CCCCCcc----------ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC-----------------
Q psy17188        331 LASPTPR----------IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK-----------------  383 (504)
Q Consensus       331 ~~~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-----------------  383 (504)
                      ....-+.          ..............++|.|+...+++.-.+.++.=.|.-+..+...                 
T Consensus       171 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~  250 (353)
T 2g8s_A          171 DQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP  250 (353)
T ss_dssp             TTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred             CCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence            6532000          0111111223577899999433323332222222223222221110                 


Q ss_pred             --------CcccccccccCCCceEEEEEcC-------CCCEEEEeeCCCcEEEeeCCCCCcceeecc-cCCCCceeEEEE
Q psy17188        384 --------TPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAI  447 (504)
Q Consensus       384 --------~~~~~~~~~~~~~~i~~~~~s~-------~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~  447 (504)
                              ..........+......++|..       +|+++++.-..+.|...+++.++......+ ......+..+++
T Consensus       251 ~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~  330 (353)
T 2g8s_A          251 EAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT  330 (353)
T ss_dssp             TCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred             cccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence                    0000000111223466778764       466777666677788887765432222111 122346888999


Q ss_pred             CCCCCEEEEe
Q psy17188        448 SPDSKVCFSC  457 (504)
Q Consensus       448 s~~~~~l~s~  457 (504)
                      .|||.++++.
T Consensus       331 ~pdG~lyv~t  340 (353)
T 2g8s_A          331 GPDGYLYVLT  340 (353)
T ss_dssp             CTTSCEEEEE
T ss_pred             CCCCcEEEEE
Confidence            9999866654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.85  E-value=0.0053  Score=54.50  Aligned_cols=152  Identities=15%  Similarity=0.184  Sum_probs=82.3

Q ss_pred             CCCEEEEecCC-----CcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEE
Q psy17188        170 DGRTLIVGGEA-----SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVR  239 (504)
Q Consensus       170 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~  239 (504)
                      +++.++.|+.+     ..+.+||..+.+......+......-..+.+  ++++++.|+.++     .+.+||+.+.+-..
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  138 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH  138 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence            67777777654     3588999887664433333222222222233  566777777553     47889988775433


Q ss_pred             e--ecCCCCCeEEEEEccCCCEEEEEcCC-------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        240 Q--FQGHTDGASCIDISADGTKLWTGGLD-------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       240 ~--~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                      .  +.........+.  -+++.++.|+.+       ..+.+||+.+.+.....   .        ..  ........+.+
T Consensus       139 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~~  203 (302)
T 2xn4_A          139 VAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA---E--------MS--TRRSGAGVGVL  203 (302)
T ss_dssp             ECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE
T ss_pred             cCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC---C--------Cc--cccccccEEEE
Confidence            2  221111112222  256666766643       35889999888654321   0        00  00011122222


Q ss_pred             cCCCCEEEEEeCC-----CcEEEEeCCCCCcccee
Q psy17188        311 LPDGRTLIVGGEA-----SNLSIWDLASPTPRIKA  340 (504)
Q Consensus       311 ~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~  340 (504)
                        +++.++.|+.+     ..+.+||..+.+.....
T Consensus       204 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~  236 (302)
T 2xn4_A          204 --NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA  236 (302)
T ss_dssp             --TTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred             --CCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence              56677777654     36899999887654443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.84  E-value=0.0058  Score=54.46  Aligned_cols=193  Identities=14%  Similarity=0.101  Sum_probs=99.7

Q ss_pred             CCcEEEEec-----CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----C-----CcEEEEeCC
Q psy17188        124 PTKYVYTGG-----KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A-----SNLSIWDLA  189 (504)
Q Consensus       124 ~~~~l~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~iw~~~  189 (504)
                      ++++++.|+     -..+.+||..+..-    ..+........-.+++. -+++.++.|+.    +     ..+.+||+.
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W----~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~   98 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW----LRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPM   98 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEE----EECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeE----eECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence            456666665     24688888766421    11111111111112222 26677777765    2     468899988


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      +.+......+.........+.+  ++++++.|+.+     ..+.+||+.+.+-...  +......-..+.+  ++++++.
T Consensus        99 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~  174 (308)
T 1zgk_A           99 TNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV  174 (308)
T ss_dssp             TTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred             CCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE
Confidence            7664433333222222222333  66677776643     4688999988754332  2211111222222  5667777


Q ss_pred             EcCC-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCC
Q psy17188        263 GGLD-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLA  332 (504)
Q Consensus       263 ~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~  332 (504)
                      |+.+     ..+.+||+.+.+....   ..        ..  ........+.+  +++.++.|+.+     ..+.+||+.
T Consensus       175 GG~~~~~~~~~~~~yd~~~~~W~~~---~~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~  239 (308)
T 1zgk_A          175 GGFDGTNRLNSAECYYPERNEWRMI---TA--------MN--TIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVE  239 (308)
T ss_dssp             CCBCSSCBCCCEEEEETTTTEEEEC---CC--------CS--SCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred             eCCCCCCcCceEEEEeCCCCeEeeC---CC--------CC--CccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCC
Confidence            7654     4588899888764322   11        00  00111122222  56677777654     468999998


Q ss_pred             CCCcccee
Q psy17188        333 SPTPRIKA  340 (504)
Q Consensus       333 ~~~~~~~~  340 (504)
                      +.+.....
T Consensus       240 ~~~W~~~~  247 (308)
T 1zgk_A          240 TETWTFVA  247 (308)
T ss_dssp             TTEEEECC
T ss_pred             CCcEEECC
Confidence            87654443

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.83  E-value=0.016  Score=52.19  Aligned_cols=195  Identities=13%  Similarity=0.165  Sum_probs=111.9

Q ss_pred             EEEEcCCCcEEEEe-------------cCCeEEEEeCCCCCCCCceeeeeecC-----CCCceEEEEEcc--CCC-EEEE
Q psy17188        118 AVTISNPTKYVYTG-------------GKGCVKVWDISQPGSKTPVSQLDCLQ-----RDNYIRSVKLLP--DGR-TLIV  176 (504)
Q Consensus       118 ~v~~s~~~~~l~~~-------------~d~~i~vw~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~--~~~-~l~~  176 (504)
                      .+++.|+|..++++             .+|.|.++|.++....  ...+...+     ..-....+.+.+  +++ +|++
T Consensus        54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V  131 (355)
T 3sre_A           54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--VSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  131 (355)
T ss_dssp             EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC--EEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--eEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence            34456777666665             4889999998753222  12222222     234567777766  454 4544


Q ss_pred             ec---CCCcEEEEeCCCCCcc--ceeeeecC-cCceEEEEECCCCCEEEEEeC-----------------CCcEEEEECC
Q psy17188        177 GG---EASNLSIWDLASPTPR--IKAELTSS-APACYALAISPDSKVCFSCCS-----------------DGNIAVWDLH  233 (504)
Q Consensus       177 ~~---~dg~i~iw~~~~~~~~--~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~iwd~~  233 (504)
                      +.   .+.+|.+|+++.....  ....+.+. -...+.+.+.++|.+.++...                 .|.|..+|. 
T Consensus       132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-  210 (355)
T 3sre_A          132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-  210 (355)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred             EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence            42   2567888887654322  22222221 234788999999987776541                 234555554 


Q ss_pred             CCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCC-CceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                       ++.. .+...-...+.++|+||++.|+.+ +..+.|..|++.. +++..              ............+++.
T Consensus       211 -~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~--------------~~~~~~~g~PDGi~vD  274 (355)
T 3sre_A          211 -NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP--------------LRVLSFDTLVDNISVD  274 (355)
T ss_dssp             -TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE--------------EEEEECSSEEEEEEEC
T ss_pred             -CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec--------------CEEEeCCCCCceEEEe
Confidence             3322 222233457899999999877655 4568899999863 33321              1111224567889999


Q ss_pred             C-CCCEEEEEeCC-CcEEEEeC
Q psy17188        312 P-DGRTLIVGGEA-SNLSIWDL  331 (504)
Q Consensus       312 ~-~~~~l~~~~~d-g~i~v~d~  331 (504)
                      + +|++.+++..+ +.|..|+.
T Consensus       275 ~e~G~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          275 PVTGDLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             TTTCCEEEEEESCHHHHHSCCT
T ss_pred             CCCCcEEEEecCCceEEEEECC
Confidence            9 59877766544 34444443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.80  E-value=0.0055  Score=54.82  Aligned_cols=103  Identities=13%  Similarity=0.094  Sum_probs=56.4

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----C-------CcEEEEECCCCeEEEe-
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----D-------GNIAVWDLHNQTLVRQ-  240 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-------g~i~iwd~~~~~~~~~-  240 (504)
                      +++.|+  ..+.+||..+.+... ..+..............++.+++.|+.    +       ..+.+||..+.+-... 
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   83 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP   83 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred             EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence            344555  579999998876542 233222222333334457777777773    1       1278889888764332 


Q ss_pred             -ecCCCCCeEEEEEccCCCEEEEEcCC--------CeEEEEECCCCceE
Q psy17188        241 -FQGHTDGASCIDISADGTKLWTGGLD--------NTVRSWDLREGCVK  280 (504)
Q Consensus       241 -~~~h~~~v~~~~~~~~~~~l~s~~~d--------g~i~~wd~~~~~~~  280 (504)
                       +....... +++.. +++.++.|+.+        ..+.+||+.+++..
T Consensus        84 ~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~  130 (315)
T 4asc_A           84 PLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG  130 (315)
T ss_dssp             CBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEE
T ss_pred             CCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEe
Confidence             11111111 12222 56666777642        45888999887643

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.79  E-value=0.0094  Score=54.20  Aligned_cols=253  Identities=10%  Similarity=0.137  Sum_probs=127.6

Q ss_pred             cEEEEEEcCCCc-EEEEecCCeEEEEeCCCCCCCCceeeee--ecCCCCceEEEEEccC---CCEEEEec-C-------C
Q psy17188        115 VVCAVTISNPTK-YVYTGGKGCVKVWDISQPGSKTPVSQLD--CLQRDNYIRSVKLLPD---GRTLIVGG-E-------A  180 (504)
Q Consensus       115 ~V~~v~~s~~~~-~l~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~~~~-~-------d  180 (504)
                      .-..|+|.|+|+ ++++...|.|++++.+. .....+..+.  ..........++|+|+   +.+|.... .       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            457899999999 88877789999998532 1111111111  1123456789999996   55555442 2       2


Q ss_pred             CcEEEEeCCCCCcc---ceee---ee---cCcCceEEEEECCCCCEEEEEeC-------------CCcEEEEECCCCe--
Q psy17188        181 SNLSIWDLASPTPR---IKAE---LT---SSAPACYALAISPDSKVCFSCCS-------------DGNIAVWDLHNQT--  236 (504)
Q Consensus       181 g~i~iw~~~~~~~~---~~~~---~~---~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iwd~~~~~--  236 (504)
                      ..|..|++......   ....   +.   .....-..|+|.|||.+.++.+.             .|.|.-++.+..-  
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~  177 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD  177 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence            35666766543111   0111   11   11112357999999965555433             2456666654320  


Q ss_pred             ----------EEEee-cCCCCCeEEEEEccCCCEEEEEcCC--CeEEEEECCCCceEEEeecCCC---------------
Q psy17188        237 ----------LVRQF-QGHTDGASCIDISADGTKLWTGGLD--NTVRSWDLREGCVKVWDISQPG---------------  288 (504)
Q Consensus       237 ----------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~~~~~~~~---------------  288 (504)
                                ....+ .++ .....++|.|+...|.++...  +.=.+.-+..+...-|......               
T Consensus       178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~  256 (353)
T 2g8s_A          178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI  256 (353)
T ss_dssp             TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred             CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence                      11111 123 346789999943344444322  1123333333322111110000               


Q ss_pred             CCCCcccceecccCCceEEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCCccceeee-ccCCCceeeEEECCCCCC
Q psy17188        289 SKTPVSQLDCLQRDNYIRSVKLLP-------DGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKS  360 (504)
Q Consensus       289 ~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~  360 (504)
                      ............+...+..+.|..       +|+++++....+.|...++...+......+ ......+..+++.||+. 
T Consensus       257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~-  335 (353)
T 2g8s_A          257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY-  335 (353)
T ss_dssp             CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC-
T ss_pred             CCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc-
Confidence            000001111112334567788864       467777766777888888765422111112 22234788999999997 


Q ss_pred             ceeee-ccCCCe
Q psy17188        361 PFFSS-HHYKSC  371 (504)
Q Consensus       361 ~~~~~-~~~~~~  371 (504)
                       ++++ -..++.
T Consensus       336 -lyv~td~~~g~  346 (353)
T 2g8s_A          336 -LYVLTDESSGE  346 (353)
T ss_dssp             -EEEEECSTTEE
T ss_pred             -EEEEEeCCCCE
Confidence             4443 333443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.66  E-value=0.03  Score=50.22  Aligned_cols=242  Identities=11%  Similarity=0.074  Sum_probs=125.4

Q ss_pred             CcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeee--ecCCCCceEEEEEccC---CCEEEEe---cCCCcEE
Q psy17188        114 EVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD--CLQRDNYIRSVKLLPD---GRTLIVG---GEASNLS  184 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~~~---~~dg~i~  184 (504)
                      ..-..|+|.|+|+++++-. .|.|++++.+.+. ...+..+.  ..........|+|+|+   +.+|...   ..++.|.
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~-~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR-KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCc-EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            4457999999999999988 8999999865432 12222111  1134567899999995   4445442   2345666


Q ss_pred             EEeCCCCC--------cccee-eee-cCcCceEEEEECCCCCEEEEEeC-------------CCcEEEEECCCC------
Q psy17188        185 IWDLASPT--------PRIKA-ELT-SSAPACYALAISPDSKVCFSCCS-------------DGNIAVWDLHNQ------  235 (504)
Q Consensus       185 iw~~~~~~--------~~~~~-~~~-~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iwd~~~~------  235 (504)
                      -|.+....        .+.+. .+. .....-..|.|.|||.+.++.+.             .|.|.-.+.+..      
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP  190 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP  190 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence            67665421        11111 121 11122457999999987776542             345555554321      


Q ss_pred             ---eEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCC--CCCcc-cceecccCCceEEE
Q psy17188        236 ---TLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGS--KTPVS-QLDCLQRDNYIRSV  308 (504)
Q Consensus       236 ---~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~v~~~  308 (504)
                         ..+.. .+|.+ ...++|+|++.+.++= +.|+.=.+--+..+...-|.......  ..... ......+......+
T Consensus       191 f~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~  268 (347)
T 3das_A          191 FPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI  268 (347)
T ss_dssp             STTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred             CCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence               11111 24443 4678999987654442 22332222223333322111110000  00000 11111122355677


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCc--cceeeeccCCCceeeEEECCCCC
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTP--RIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                      +|. +|..++.....+.|....+.....  .....+......+..++..||+.
T Consensus       269 ~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~  320 (347)
T 3das_A          269 AYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDK  320 (347)
T ss_dssp             EEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTE
T ss_pred             EEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCc
Confidence            776 456666666666777776654321  11222333446788888888886

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.62  E-value=0.016  Score=51.71  Aligned_cols=190  Identities=10%  Similarity=0.064  Sum_probs=97.1

Q ss_pred             EEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-----C------CcEEEEeCCCCCccce
Q psy17188        128 VYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-----A------SNLSIWDLASPTPRIK  196 (504)
Q Consensus       128 l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d------g~i~iw~~~~~~~~~~  196 (504)
                      ++.|+ ..+.+||..+..-.  ...+.  .............+++.++.|+.     .      ..+.+||..+.+....
T Consensus         8 ~~~GG-~~~~~yd~~~~~W~--~~~~~--~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~   82 (315)
T 4asc_A            8 FMISE-EGAVAYDPAANECY--CASLS--SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM   82 (315)
T ss_dssp             EEEET-TEEEEEETTTTEEE--EEECC--CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred             EEEcC-CceEEECCCCCeEe--cCCCC--CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence            33444 67888998774311  11111  11122223333457788888873     1      1277888887654333


Q ss_pred             eeeecCcCceEEEEECCCCCEEEEEeCC--------CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcC-
Q psy17188        197 AELTSSAPACYALAISPDSKVCFSCCSD--------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGL-  265 (504)
Q Consensus       197 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~-  265 (504)
                      ..+......-..+.+  ++++++.|+.+        ..+.+||..+.+-...  +.........+ . -+++.++.|+. 
T Consensus        83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~-~~~~iyv~GG~~  158 (315)
T 4asc_A           83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL-S-HMDLVYVIGGKG  158 (315)
T ss_dssp             CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-E-ETTEEEEECCBC
T ss_pred             CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-E-ECCEEEEEeCCC
Confidence            222221111122222  56677777632        4589999988754332  21111111222 2 35667777775 


Q ss_pred             C-----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCC
Q psy17188        266 D-----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPT  335 (504)
Q Consensus       266 d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~  335 (504)
                      +     ..+.+||+.+.+....   .+        ..  ........+.+  +++.++.|+.++     .+.+||..+.+
T Consensus       159 ~~~~~~~~~~~yd~~~~~W~~~---~~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~  223 (315)
T 4asc_A          159 SDRKCLNKMCVYDPKKFEWKEL---AP--------MQ--TARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK  223 (315)
T ss_dssp             TTSCBCCCEEEEETTTTEEEEC---CC--------CS--SCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred             CCCcccceEEEEeCCCCeEEEC---CC--------CC--CchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence            2     4688999988764321   11        00  00111112222  567777776554     48889998876


Q ss_pred             ccceee
Q psy17188        336 PRIKAE  341 (504)
Q Consensus       336 ~~~~~~  341 (504)
                      ......
T Consensus       224 W~~~~~  229 (315)
T 4asc_A          224 WAPFEA  229 (315)
T ss_dssp             EEEECC
T ss_pred             EEECCC
Confidence            554433

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.59  E-value=0.015  Score=52.03  Aligned_cols=103  Identities=13%  Similarity=0.081  Sum_probs=55.3

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC----CC-------cEEEEECCCCeEEEe-
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----DG-------NIAVWDLHNQTLVRQ-  240 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~-  240 (504)
                      .++.|+.  .+..||..+.+... ..+..............++.+++.|+.    ++       .+.+||..+.+-... 
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            4455543  48899988776533 222221222223334457777777773    12       177889887764332 


Q ss_pred             -ecCCCCCeEEEEEccCCCEEEEEcCC-------CeEEEEECCCCceE
Q psy17188        241 -FQGHTDGASCIDISADGTKLWTGGLD-------NTVRSWDLREGCVK  280 (504)
Q Consensus       241 -~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~  280 (504)
                       +.........+.+  +++.++.|+.+       ..+.+||+.+.+..
T Consensus        95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~  140 (318)
T 2woz_A           95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS  140 (318)
T ss_dssp             CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE
T ss_pred             CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe
Confidence             1111111122222  56677777754       35788898887654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.55  E-value=0.0038  Score=57.04  Aligned_cols=95  Identities=13%  Similarity=0.141  Sum_probs=49.0

Q ss_pred             CCCEEEEecC-CCcEEEEeCCC--CCccceeeee-cCcCceEEEEECCCCCEEEEEeC-C---------CcEEEEECCCC
Q psy17188        170 DGRTLIVGGE-ASNLSIWDLAS--PTPRIKAELT-SSAPACYALAISPDSKVCFSCCS-D---------GNIAVWDLHNQ  235 (504)
Q Consensus       170 ~~~~l~~~~~-dg~i~iw~~~~--~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~iwd~~~~  235 (504)
                      +++.++.|+. ...+.+||+..  .+......+. .....-.++.+  ++++++.|+. +         ..+.+||+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            6666677654 34688999864  3333222222 11111122222  5667777765 2         46899999887


Q ss_pred             eEEEeecCC-CCCeEEEEEccCCCEEEEEcCC
Q psy17188        236 TLVRQFQGH-TDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       236 ~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      +-...-... .......+...++++++.|+.+
T Consensus        97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~  128 (357)
T 2uvk_A           97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN  128 (357)
T ss_dssp             EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred             cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence            644322211 1111111122467777888765

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.48  E-value=0.048  Score=48.09  Aligned_cols=209  Identities=8%  Similarity=0.071  Sum_probs=114.7

Q ss_pred             CCCcEEEEec---CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC--------------CcEEE
Q psy17188        123 NPTKYVYTGG---KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--------------SNLSI  185 (504)
Q Consensus       123 ~~~~~l~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------g~i~i  185 (504)
                      .++.+|....   ++.|...+.+... ...+..       .  .+--+++++++|+.....              ..|+.
T Consensus        23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~-------~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~   92 (302)
T 3s25_A           23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN-------D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR   92 (302)
T ss_dssp             EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE-------E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred             EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC-------C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence            4566665543   5666666654421 222211       1  134568899999887543              35777


Q ss_pred             EeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188        186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC----SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW  261 (504)
Q Consensus       186 w~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  261 (504)
                      .+++..+..   .+....    +..|+++++.|+-..    .+..|...+++... ...+..+..    ..++++++.|+
T Consensus        93 i~~dg~~~~---~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy  160 (302)
T 3s25_A           93 IKRNGHGST---VLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFY  160 (302)
T ss_dssp             EETTSCCCE---EEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEE
T ss_pred             EeCCCCcce---EeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEE
Confidence            777765432   222221    236777888888765    23456666665433 333433322    34567788777


Q ss_pred             EEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCccc
Q psy17188        262 TGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA--SNLSIWDLASPTPRI  338 (504)
Q Consensus       262 s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~  338 (504)
                      -.+. ...|.+.++..+..+..                ..  ... ...++|++.+|+.....  ..|..-++.......
T Consensus       161 ~t~~g~~~Iy~~~l~g~~~~~l----------------~~--~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~  221 (302)
T 3s25_A          161 YNNPKNGQLYRYDTASQSEALF----------------YD--CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV  221 (302)
T ss_dssp             EECTTTCCEEEEETTTTEEEEE----------------EC--SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE
T ss_pred             EEeCCCceEEEEECCCCCEEEE----------------eC--CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE
Confidence            6654 57888888877653211                11  111 12356888888876544  356666666543222


Q ss_pred             eeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCC
Q psy17188        339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQ  379 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~  379 (504)
                      .   ..  ..+  ..++|+++.+++.+......|..-++..
T Consensus       222 L---t~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          222 L---TE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             C---SC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred             E---eC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence            2   11  122  3477888865544444456666666654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.45  E-value=0.027  Score=51.25  Aligned_cols=148  Identities=9%  Similarity=0.106  Sum_probs=97.6

Q ss_pred             EcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecC--CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc---
Q psy17188        121 ISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQ--RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI---  195 (504)
Q Consensus       121 ~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---  195 (504)
                      .+.+|.-++...++.||.-++...   ...+.+....  .-..|..+..+|+|++||..+ +..|.|-.+..+....   
T Consensus        28 ~~~n~t~i~~a~~n~iR~~~i~~~---~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~  103 (452)
T 3pbp_A           28 SSQNGTRIVFIQDNIIRWYNVLTD---SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV  103 (452)
T ss_dssp             EETTTTEEEEEETTEEEEEETTTC---SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred             EEcCCCEEEEEECCEEEEEECCCC---CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence            345666777777788998888753   2344444322  223578899999999999986 4689998887332110   


Q ss_pred             -------eeeeec------CcCceEEEEECC---CCCEEEEEeCCCcEEEEECCCC--eEEEeec---------CCCCCe
Q psy17188        196 -------KAELTS------SAPACYALAISP---DSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQ---------GHTDGA  248 (504)
Q Consensus       196 -------~~~~~~------~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~---------~h~~~v  248 (504)
                             ...+.-      ...+|..+.|+|   .+..|++-..|+.|++||+...  ++. .++         .....|
T Consensus       104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev  182 (452)
T 3pbp_A          104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI  182 (452)
T ss_dssp             HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred             ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence                   011111      246799999999   4558999999999999999852  111 222         233578


Q ss_pred             EEEEEccCCCEEEEE--cCCCeEEEEE
Q psy17188        249 SCIDISADGTKLWTG--GLDNTVRSWD  273 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~--~~dg~i~~wd  273 (504)
                      .+++|..++-.|...  +..|.|+-.-
T Consensus       183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          183 TDLEFSKDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             EEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred             EEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence            889998877656553  4777776543

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.42  E-value=0.029  Score=59.09  Aligned_cols=266  Identities=11%  Similarity=0.212  Sum_probs=148.2

Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      ...+|.|.|+..+...........     +.-.+|..+.++.-. ..++.|+|+++.+.+..+.- ..+|.-=.|-.+. 
T Consensus        46 ~~~~vvIidl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-  117 (1630)
T 1xi4_A           46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-  117 (1630)
T ss_pred             CCceEEEEECCCCCCcccccccch-----hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-
Confidence            344789999987654322222221     244678777776654 67899999999888887773 4567666776544 


Q ss_pred             EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee--cccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188        259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW  329 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~  329 (504)
                      .|+-.+ +..|+-|++.....            |...+..  .-....|..-..+++.++++..+       -.|.+.+|
T Consensus       118 ~l~lVT-~~aVyHW~~~~~s~------------P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy  184 (1630)
T 1xi4_A          118 TVALVT-DNAVYHWSMEGESQ------------PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY  184 (1630)
T ss_pred             eeEEEc-CCeEEEeccCCCCc------------cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence            444333 46799999964221            1111111  11245677778888888877543       34789999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCCc-eeeec---cCCCeEEEEecCCC-CCCCcc--c----ccccccCCCce
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKSP-FFSSH---HYKSCVKVWDISQP-GSKTPV--S----QLDCLQRDNYI  398 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~---~~~~~i~i~d~~~~-~~~~~~--~----~~~~~~~~~~i  398 (504)
                      ..+..   ....+.+|...-..+....+.... +++.+   ...+.+.|-++... .....+  .    .+.........
T Consensus       185 S~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp  261 (1630)
T 1xi4_A          185 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP  261 (1630)
T ss_pred             ecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcc
Confidence            88764   233344443333333222111110 22211   11367888888553 111111  0    01111123445


Q ss_pred             EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                      .++..++.-..+...+.-|.|++||+.++..+........  +|...+-.....-++.....|.|.--.+..
T Consensus       262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~--~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCC--ceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence            5788888888888999999999999999877665544332  232222222222233333555554444443

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.39  E-value=0.068  Score=47.68  Aligned_cols=191  Identities=15%  Similarity=0.142  Sum_probs=95.5

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----CC-------cEEEEeCCCCCccc
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----AS-------NLSIWDLASPTPRI  195 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~  195 (504)
                      +++.|+ ..+..||..+..-..    .................++..++.|+.    ++       .+.+||..+.+...
T Consensus        18 i~~~GG-~~~~~yd~~~~~W~~----~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~   92 (318)
T 2woz_A           18 ILLVND-TAAVAYDPMENECYL----TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG   92 (318)
T ss_dssp             EEEECS-SEEEEEETTTTEEEE----EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred             hhhccc-cceEEECCCCCceec----ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence            444444 347888887643111    111111111223334457788888873    11       17788887765443


Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCC-------CcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCC
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLD  266 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d  266 (504)
                      ...+.........+.+  ++++++.|+.+       ..+.+||+.+.+-...  +......- +++. .++++++.|+.+
T Consensus        93 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~  168 (318)
T 2woz_A           93 LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKT  168 (318)
T ss_dssp             CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEE
T ss_pred             CCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCC
Confidence            3333222222222223  56677777653       2488899887754432  21111111 1222 356666777642


Q ss_pred             ------CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCC
Q psy17188        267 ------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----SNLSIWDLASPT  335 (504)
Q Consensus       267 ------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~  335 (504)
                            ..+.+||+.+.+.....   .        ..  ........+.+  +++.++.|+.+     ..+.+||..+.+
T Consensus       169 ~~~~~~~~~~~yd~~~~~W~~~~---~--------~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          169 DDKKCTNRVFIYNPKKGDWKDLA---P--------MK--TPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             SSSCBCCCEEEEETTTTEEEEEC---C--------CS--SCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             CCCCccceEEEEcCCCCEEEECC---C--------CC--CCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence                  35899999988654321   0        00  00011112222  56677777543     347789998876


Q ss_pred             ccceee
Q psy17188        336 PRIKAE  341 (504)
Q Consensus       336 ~~~~~~  341 (504)
                      ......
T Consensus       234 W~~~~~  239 (318)
T 2woz_A          234 WEVMTE  239 (318)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            554433

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.37  E-value=0.025  Score=51.57  Aligned_cols=96  Identities=9%  Similarity=0.047  Sum_probs=49.0

Q ss_pred             CCcEEEEec--CCeEEEEeCCCC-CCCCceeeeeecCCCCceEEEEEccCCCEEEEecC-C---------CcEEEEeCCC
Q psy17188        124 PTKYVYTGG--KGCVKVWDISQP-GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-A---------SNLSIWDLAS  190 (504)
Q Consensus       124 ~~~~l~~~~--d~~i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~iw~~~~  190 (504)
                      ++++++.|+  ...+.++|..+. ..-..+..+.. .....-.++.+  ++++++.|+. +         ..+.+||+.+
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~-~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~   95 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPG-GPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT   95 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTT-CCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCC-CcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence            577777776  567888988641 11111111110 01111122222  6777777765 2         4689999987


Q ss_pred             CCccceeeee-cCcCceEEEEECCCCCEEEEEeCC
Q psy17188        191 PTPRIKAELT-SSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       191 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                      .+......+. .......++.  .++++++.|+.+
T Consensus        96 ~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~  128 (357)
T 2uvk_A           96 NSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN  128 (357)
T ss_dssp             TEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred             CcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence            6654333332 1111122222  467777788754

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.31  E-value=0.078  Score=46.74  Aligned_cols=214  Identities=10%  Similarity=0.134  Sum_probs=115.2

Q ss_pred             EccCCCEEEEec--CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC--------------CcEEEE
Q psy17188        167 LLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--------------GNIAVW  230 (504)
Q Consensus       167 ~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------g~i~iw  230 (504)
                      |+.++.+|+...  .++.|...+.+....   ..+...    .+--+++++.+|+.+...              ..|+..
T Consensus        21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~---~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i   93 (302)
T 3s25_A           21 FCESDGEVFFSNTNDNGRLYAMNIDGSNI---HKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI   93 (302)
T ss_dssp             EEEETTEEEEEEGGGTTEEEEEETTSCSC---EEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred             EEEeCCEEEEEeCCCCceEEEEcCCCCCC---EEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence            345777777764  356677777654442   222222    123457788888877543              357777


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      +++..+...... .  .  +..|+++++.|+-..    .+..|...++.....+              .+  ..+.  + 
T Consensus        94 ~~dg~~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~--------------~l--t~~~--~-  149 (302)
T 3s25_A           94 KRNGHGSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK--------------KI--KNHY--L-  149 (302)
T ss_dssp             ETTSCCCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE--------------EE--ESSC--C-
T ss_pred             eCCCCcceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE--------------EE--eCCC--c-
Confidence            777664332222 1  1  236777888887665    3345666666644321              11  1111  1 


Q ss_pred             EEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc
Q psy17188        307 SVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP  385 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~  385 (504)
                       .+++++++.|+..+. ...|.+.++........  ...   .. ...+.|+++.+++........|..-++....... 
T Consensus       150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l--~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~-  221 (302)
T 3s25_A          150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF--YDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV-  221 (302)
T ss_dssp             -CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE--ECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE-
T ss_pred             -eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE--eCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE-
Confidence             345678888887655 56788888776543222  221   22 2335688886555444333456555555432211 


Q ss_pred             ccccccccCCCceEEEEEcCCCCEEEEeeC--CCcEEEeeCCCCC
Q psy17188        386 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPT  428 (504)
Q Consensus       386 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~--dg~i~iwd~~~~~  428 (504)
                      +.       ...+  ..|+|++++|+.+..  .+.|..-++....
T Consensus       222 Lt-------~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~  257 (302)
T 3s25_A          222 LT-------EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG  257 (302)
T ss_dssp             CS-------CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred             Ee-------CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence            11       1122  347888888876533  3556666666443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.29  E-value=0.066  Score=48.76  Aligned_cols=154  Identities=10%  Similarity=0.146  Sum_probs=95.5

Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCc-
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP-  385 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-  385 (504)
                      ..+.+|..++++- ++.||.-++.....-.....+.  .-..+..+..+|+|.  +++.. .+..|.|..+..+..... 
T Consensus        27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~--lLAl~-g~~~V~Vv~LP~~~~~~~~  102 (452)
T 3pbp_A           27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD--LLCLF-NDNEIFVMEVPWGYSNVED  102 (452)
T ss_dssp             EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS--EEEEE-CSSEEEEEECCTTCSCCCC
T ss_pred             EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC--EEEEe-cCCeEEEEEecCccccCcc
Confidence            3455666666663 4678877877543222333332  233678899999998  44444 466888888874321111 


Q ss_pred             ------cc--ccccc----cCCCceEEEEEcCC---CCEEEEeeCCCcEEEeeCCCCCccee--------ecccCCCCce
Q psy17188        386 ------VS--QLDCL----QRDNYIRSVKLLPD---GRTLIVGGEASNLSIWDLASPTPRIK--------AELTSSAPAC  442 (504)
Q Consensus       386 ------~~--~~~~~----~~~~~i~~~~~s~~---g~~l~~~~~dg~i~iwd~~~~~~~~~--------~~~~~~~~~v  442 (504)
                            +.  .....    .....|..+.|+|-   +..|++-..|+.|++||+........        +........|
T Consensus       103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev  182 (452)
T 3pbp_A          103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI  182 (452)
T ss_dssp             HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred             cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence                  00  11111    13567999999994   56899999999999999986322211        1122233668


Q ss_pred             eEEEECCCCCEEEEee--CCCcEEEE
Q psy17188        443 YALAISPDSKVCFSCC--SDGNIAVW  466 (504)
Q Consensus       443 ~~l~~s~~~~~l~s~~--~dg~i~iw  466 (504)
                      .+++|..++-.|...+  +.|.|+-.
T Consensus       183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          183 TDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            8999999887666644  77877643

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.09  E-value=0.15  Score=45.71  Aligned_cols=249  Identities=8%  Similarity=0.025  Sum_probs=127.9

Q ss_pred             eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC---CCE
Q psy17188        240 QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD---GRT  316 (504)
Q Consensus       240 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~  316 (504)
                      .+...-.....|+|.|||+++++--..|.|++++...++........        . ...........++++|+   +..
T Consensus        26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~--------~-v~~~g~~GllGia~~Pdf~~~g~   96 (347)
T 3das_A           26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP--------G-VSPSGEGGLLGIALSPDYASDHM   96 (347)
T ss_dssp             EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT--------T-CCCBTTBSEEEEEECTTHHHHCE
T ss_pred             EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC--------c-eeecCCCCceeeEeccccccCCE
Confidence            34434556789999999987776655899999987766543211000        0 11223456789999995   445


Q ss_pred             EEEE---eCCCcEEEEeCCCCC--------ccce-eeec-cCCCceeeEEECCCCCCceeeecc------------CCCe
Q psy17188        317 LIVG---GEASNLSIWDLASPT--------PRIK-AELT-SSAPACYALAISPDSKSPFFSSHH------------YKSC  371 (504)
Q Consensus       317 l~~~---~~dg~i~v~d~~~~~--------~~~~-~~~~-~~~~~i~~~~~~~~~~~~~~~~~~------------~~~~  371 (504)
                      |++.   ..++.|.-|......        ...+ ..+. ........+.|.||+. +++.++.            ..+.
T Consensus        97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~  175 (347)
T 3das_A           97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGK  175 (347)
T ss_dssp             EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTC
T ss_pred             EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCE
Confidence            5543   234566667665421        1111 1121 1222456799999986 2444332            1244


Q ss_pred             EEEEecCCCC-CCCcc--cccccccCCCceEEEEEcCCCCEEEEee-CCCcEEEeeCCCCCc----------------ce
Q psy17188        372 VKVWDISQPG-SKTPV--SQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP----------------RI  431 (504)
Q Consensus       372 i~i~d~~~~~-~~~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~iwd~~~~~~----------------~~  431 (504)
                      |.-.+..... ...++  ...-...+. ....++|+|+|.+.++=. .++.=.|-.+..+..                ..
T Consensus       176 IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P  254 (347)
T 3das_A          176 ILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDP  254 (347)
T ss_dssp             EEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCC
T ss_pred             EEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCC
Confidence            4444443210 00000  011111222 244899999887655432 222222222222110                00


Q ss_pred             eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce----EEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        432 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      ......+......++|. ++..++..-..+.|....++....    ...+.+....+.+|+..|||.++++-+
T Consensus       255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          255 VAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             SEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             cEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            11111121245567776 455666555666777777765432    222333346799999999997766543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.08  E-value=0.0059  Score=54.48  Aligned_cols=116  Identities=9%  Similarity=0.050  Sum_probs=70.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEeecCC-CCCeEEEEEc--c-CCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCC
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDIS--A-DGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSK  290 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~--~-~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~  290 (504)
                      ..++.++.||.|.-+|.++|+.+.+++.. ..++....-.  + ++..++.. +.||.|..++..+|.. .|....+.  
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~~~--   87 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSIRQ--   87 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEHHH--
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeecccc--
Confidence            37888999999999999999999998753 1222221100  1 22333333 6899999999988843 34332110  


Q ss_pred             CCcccceecccCCceEE---EEE-----cCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        291 TPVSQLDCLQRDNYIRS---VKL-----LPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       291 ~~~~~~~~~~~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                              .-...++..   ...     ...+..+++++.+|.+...|+++++.......
T Consensus        88 --------lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           88 --------LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             --------HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             --------ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence                    001111111   000     01355788999999999999999865554443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.06  E-value=0.05  Score=44.61  Aligned_cols=156  Identities=10%  Similarity=0.013  Sum_probs=81.9

Q ss_pred             CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc
Q psy17188        246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  325 (504)
Q Consensus       246 ~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  325 (504)
                      ..+..++|+|+|.+.+.  .+|.+.-.+..+.+...|--..       ..+-...- ....++.|.|+|.+.++  .||.
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~-------t~IG~~Gw-~~F~a~~fD~~G~LYav--~dG~  108 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA-------KKIGNGGW-NQFQFLFFDPNGYLYAV--SKDK  108 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC-------EEEECSCG-GGCSEEEECTTSCEEEE--ETTE
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc-------cEeccccc-ccceEEEECCCCCEEEe--CCCE
Confidence            36779999998875555  6787777776553321110000       00000011 11478999999997777  5598


Q ss_pred             EEEEeCCCCCcc-cee---e-eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccc--cCCCce
Q psy17188        326 LSIWDLASPTPR-IKA---E-LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--QRDNYI  398 (504)
Q Consensus       326 i~v~d~~~~~~~-~~~---~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--~~~~~i  398 (504)
                      |+-++-.+.... ...   . -...-..+..+.+.|++.  +++..  ++.+.-..........-+......  ..-...
T Consensus       109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~y  184 (236)
T 1tl2_A          109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTF  184 (236)
T ss_dssp             EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred             EEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce--EEEEe--CCcEEecCCCCCCCcccccccceeccCCcceE
Confidence            888875332211 100   1 111124678999999997  55555  666433222211111111000000  112234


Q ss_pred             EEEEEcCCCCEEEEeeCCCcE
Q psy17188        399 RSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      ..+.|.+++.+.++.  ++.+
T Consensus       185 r~l~f~~~G~l~~v~--~g~~  203 (236)
T 1tl2_A          185 KFLFFSSVGTLFGVQ--GGKF  203 (236)
T ss_dssp             EEEEECTTSCEEEEE--TTEE
T ss_pred             EEEEECCCCcEEEEe--CCeE
Confidence            457789998877766  6643

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.00  E-value=0.02  Score=46.89  Aligned_cols=147  Identities=9%  Similarity=-0.016  Sum_probs=83.9

Q ss_pred             CCcceEEEECCCCCcccCCCCCCcccCCCCCccccc-----eeee---cCCCcEEEEEEcCCCcEEEEecCCeEEEEeCC
Q psy17188         71 GKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQ-----INTL---SHGEVVCAVTISNPTKYVYTGGKGCVKVWDIS  142 (504)
Q Consensus        71 ~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~  142 (504)
                      -.++..++++|+|.+.++  .++.++....+....+     -..+   +.+. -.++.|.|+|.+.++ +||.|.-++-.
T Consensus        40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP  115 (236)
T 1tl2_A           40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPP  115 (236)
T ss_dssp             CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCC
T ss_pred             cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCC
Confidence            356779999999998888  5555655443321111     1222   2222 578999999999998 77999888754


Q ss_pred             CCCCCCceeeeeec--CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc----ceeeee-cCcCceEEEEECCCC
Q psy17188        143 QPGSKTPVSQLDCL--QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR----IKAELT-SSAPACYALAISPDS  215 (504)
Q Consensus       143 ~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~-~~~~~v~~~~~s~~~  215 (504)
                      +.+...-+..-...  ..=..+..|.|.|+|.+.++.  |+.++-+........    ....+. ..-..-.-+.|.+++
T Consensus       116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G  193 (236)
T 1tl2_A          116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG  193 (236)
T ss_dssp             CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred             cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence            43322222111110  112468999999999977776  677543332211100    011111 222234456688888


Q ss_pred             CEEEEEeCCC
Q psy17188        216 KVCFSCCSDG  225 (504)
Q Consensus       216 ~~l~~~~~dg  225 (504)
                      .+.++.  ++
T Consensus       194 ~l~~v~--~g  201 (236)
T 1tl2_A          194 TLFGVQ--GG  201 (236)
T ss_dssp             CEEEEE--TT
T ss_pred             cEEEEe--CC
Confidence            766655  55

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.93  E-value=0.039  Score=55.25  Aligned_cols=234  Identities=14%  Similarity=0.169  Sum_probs=113.6

Q ss_pred             cCCCEEEEEcCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCC------
Q psy17188        255 ADGTKLWTGGLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEA------  323 (504)
Q Consensus       255 ~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------  323 (504)
                      .++..++.|+.+    ..+.+||+.+++........+...        ......-.+++..+ +++.++.|+.+      
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~--------~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~  467 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSE--------VPVARMCHTFTTISRNNQLLLIGGRKAPHQGL  467 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSC--------CCCCCBSCEEEEETTTTEEEEECCBSSTTCBC
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCC--------CCccccceEEEEEccCCEEEEEcCCCCCCCcc
Confidence            456677777754    468888888877543321100000        00011112333333 67777777643      


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC--eEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      ..+.+||..+.++.....+...... .+.+...++.  +++.|+.++  .+.+||..+..-......-........-..+
T Consensus       468 ~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~--iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~  544 (695)
T 2zwa_A          468 SDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGN--VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGL  544 (695)
T ss_dssp             CCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSC--EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEE
T ss_pred             ccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCE--EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEE
Confidence            3578899888755444333322211 2223323444  666665543  6888888764211100000000111112245


Q ss_pred             EEcCC-CCEEEEeeC--C-----CcEEEeeCCCCC------cceeeccc-CCCCceeEEEECCCCCEEEEeeC-------
Q psy17188        402 KLLPD-GRTLIVGGE--A-----SNLSIWDLASPT------PRIKAELT-SSAPACYALAISPDSKVCFSCCS-------  459 (504)
Q Consensus       402 ~~s~~-g~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~~~-~~~~~v~~l~~s~~~~~l~s~~~-------  459 (504)
                      .+..+ ++.++.|+.  +     ..+.+||+.+..      ........ ...... +++...++++++.|+.       
T Consensus       545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~  623 (695)
T 2zwa_A          545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFD  623 (695)
T ss_dssp             EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCC
T ss_pred             EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCC
Confidence            55555 667777765  2     358899998776      12111111 111111 2233333777777774       


Q ss_pred             -CCcEEEEEcCCcceEEEEeecCC------c--e-EEEEEccCCCEEEEecC
Q psy17188        460 -DGNIAVWDLHNQTLVRQFQGHTD------G--A-SCIDISADGTKLWTGGL  501 (504)
Q Consensus       460 -dg~i~iwd~~~~~~~~~~~~h~~------~--v-~~~~~s~d~~~l~s~s~  501 (504)
                       ...+.+||+.+.+-. .......      +  + .+.....+++.++.||.
T Consensus       624 ~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg  674 (695)
T 2zwa_A          624 RTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG  674 (695)
T ss_dssp             TTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred             CCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence             345999999887543 1110000      0  0 23344456688888874

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.92  E-value=0.24  Score=45.30  Aligned_cols=204  Identities=7%  Similarity=0.121  Sum_probs=125.7

Q ss_pred             EEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188        120 TISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  199 (504)
Q Consensus       120 ~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  199 (504)
                      -.+|..++||-=...++.|+|+++.   ..+....   ....|.-=.|-.+. .|+..+ +..|+-|++.... .....+
T Consensus        72 IMnP~~~iiALrag~~lQiFnle~K---~klks~~---~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s-~P~kvF  142 (494)
T 1bpo_A           72 IMNPASKVIALKAGKTLQIFNIEMK---SKMKAHT---MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMF  142 (494)
T ss_dssp             EECSSSSCEEEEETTEEEEEETTTT---EEEEEEE---CSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSC-CCEEEE
T ss_pred             eeCCCCcEEEEecCCeEEEEchHHh---hhhccee---cCCCceEEEecCCC-eEEEEc-CCeeEEecccCCC-Cchhhe
Confidence            3567777777666889999999874   3344333   23456666776544 455553 5689999997532 223333


Q ss_pred             ecC----cCceEEEEECCCCCEEEEEeC-------CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC---CEEEEEcC
Q psy17188        200 TSS----APACYALAISPDSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG---TKLWTGGL  265 (504)
Q Consensus       200 ~~~----~~~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~  265 (504)
                      ..|    ...|..-..+++.++++..+-       .|.+.+|..+.+ .-+.+.+|......+....+.   ..+..+..
T Consensus       143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r  221 (494)
T 1bpo_A          143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR  221 (494)
T ss_dssp             ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred             ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence            322    345777777889997775442       467899997754 346678887665554443211   23444443


Q ss_pred             C---CeEEEEECCCCceEEEeecCCCCCCCcc------cceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        266 D---NTVRSWDLREGCVKVWDISQPGSKTPVS------QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       266 d---g~i~~wd~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                      .   +.+.+.++....         ....++.      .+......+...++..++.-..++.-+.-|.+++||++++..
T Consensus       222 ~~~g~kLhi~Ei~~~~---------~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~  292 (494)
T 1bpo_A          222 GQAGGKLHIIEVGTPP---------TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  292 (494)
T ss_dssp             STTCCEEEEEECSCCC---------TTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred             cCCCcEEEEEEcCCCc---------cCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence            2   566666664320         0000110      111122356678899999888999999999999999999865


Q ss_pred             cceeee
Q psy17188        337 RIKAEL  342 (504)
Q Consensus       337 ~~~~~~  342 (504)
                      .....+
T Consensus       293 i~~nrI  298 (494)
T 1bpo_A          293 IYMNRI  298 (494)
T ss_dssp             EEEEEC
T ss_pred             eeeecc
Confidence            544443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.87  E-value=0.1  Score=52.26  Aligned_cols=156  Identities=13%  Similarity=0.198  Sum_probs=86.1

Q ss_pred             cCCCEEEEecCC----CcEEEEeCCCCCcccee-e-----eecCcCceEEEEECCCCCEEEEEeCC------CcEEEEEC
Q psy17188        169 PDGRTLIVGGEA----SNLSIWDLASPTPRIKA-E-----LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDL  232 (504)
Q Consensus       169 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~-----~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~  232 (504)
                      .++..++.|+.+    ..+.+||..+.+..... .     .......-..+.+..++++++.|+.+      ..+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            467777777743    46889998877654332 1     11111112233332267777777653      35889999


Q ss_pred             CCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcCCC--eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        233 HNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLDN--TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       233 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      .+.+-...  +...... .+++...+++.++.|+.++  .+.+||+.+.+....   .....     .  ........++
T Consensus       476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~---~~~g~-----~--p~~r~~~~a~  544 (695)
T 2zwa_A          476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV---TPKDE-----F--FQNSLVSAGL  544 (695)
T ss_dssp             TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC---CCSSG-----G--GGSCCBSCEE
T ss_pred             CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc---cCCCC-----C--CCcccceeEE
Confidence            88654332  2211111 2233324788888887655  689999998764322   11000     0  0111112335


Q ss_pred             EEcCC-CCEEEEEeC--C-----CcEEEEeCCCCC
Q psy17188        309 KLLPD-GRTLIVGGE--A-----SNLSIWDLASPT  335 (504)
Q Consensus       309 ~~~~~-~~~l~~~~~--d-----g~i~v~d~~~~~  335 (504)
                      .+..+ ++.++.|+.  +     ..+.+||+.+..
T Consensus       545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence            55555 666777765  2     358899998876

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.75  E-value=0.39  Score=45.35  Aligned_cols=256  Identities=14%  Similarity=0.153  Sum_probs=141.6

Q ss_pred             CCCEEEEec-CCCcEEEEeCCCCCccceeeeecCcCceEEEEEC--CCCCEEEEEeC-------CCcE------------
Q psy17188        170 DGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAIS--PDSKVCFSCCS-------DGNI------------  227 (504)
Q Consensus       170 ~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~-------dg~i------------  227 (504)
                      ||++|+.-. .+..|...+++..+...+..++ ....+..++|-  |+..+++.+++       ||..            
T Consensus       141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f  219 (638)
T 3sbq_A          141 DGKYLFINDKANSRVARIRLDIMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY  219 (638)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred             eeEEEEEecCCCcceEEEECCcEeeceeEeCC-CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence            788888875 4566888888876655444443 44557888886  67778888775       3331            


Q ss_pred             EEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---------------eEEEEECC-------CCc-------
Q psy17188        228 AVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---------------TVRSWDLR-------EGC-------  278 (504)
Q Consensus       228 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---------------~i~~wd~~-------~~~-------  278 (504)
                      ...|..+.+...++. -.+....+...+++++.++.+.+.               .+.++++.       .|+       
T Consensus       220 ~~iD~~tm~v~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~  298 (638)
T 3sbq_A          220 NAIDAETMEMAFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDS  298 (638)
T ss_dssp             EEEETTTCSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred             EEEcCCccEEEEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCC
Confidence            112222222222221 122333445566777777665432               35555543       122       


Q ss_pred             -eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCc-----------cceeeeccC
Q psy17188        279 -VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTP-----------RIKAELTSS  345 (504)
Q Consensus       279 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~-----------~~~~~~~~~  345 (504)
                       +.+.+....... ................+..+|||+++++++. +.++.++|++....           ....+.+ -
T Consensus       299 gv~ViD~~~~~~~-~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~  376 (638)
T 3sbq_A          299 KTPVLDGRKKDGK-DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-L  376 (638)
T ss_dssp             CCCEEECSCBTTB-CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-C
T ss_pred             CeeEEcccccccc-CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-C
Confidence             222222110000 0012222233455678899999999888764 67899999874211           1111222 2


Q ss_pred             CCceeeEEECCCCCCceeeeccCCCeEEEEecCCC------CCCCcccccccccCCCceEEEEE------cCCCCEEEEe
Q psy17188        346 APACYALAISPDSKSPFFSSHHYKSCVKVWDISQP------GSKTPVSQLDCLQRDNYIRSVKL------LPDGRTLIVG  413 (504)
Q Consensus       346 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~~~~~~i~~~~~------s~~g~~l~~~  413 (504)
                      .-.....+|.++|.  .+.+-.-|..|..|++...      .....+  +....-...+-.+.-      .|||++|++.
T Consensus       377 GlGPlHt~Fd~~G~--aYTtlfidSqvvkWni~~a~~~~~g~~~~~v--~~k~dv~YqpGH~~~~~get~~~dGk~lv~l  452 (638)
T 3sbq_A          377 GLGPLHTTFDGRGN--AYTTLFIDSQVVKWNMEEAVRAYKGEKVNYI--KQKLDVHYQPGHLHASLCETNEADGKWLVAL  452 (638)
T ss_dssp             CSCEEEEEECSSSE--EEEEETTTTEEEEEEHHHHHHHHTTCCCCCE--EEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred             CCcccEEEECCCCc--eEeeeeecceEEEEeccHHHHHhcCccCCee--eeccccccCCcccccCCCccCCCCccEEEEe
Confidence            34567888999884  7888889999999998642      111111  111111222333333      5789999987


Q ss_pred             eC---CCc----------EEEeeCCCCCcceee
Q psy17188        414 GE---ASN----------LSIWDLASPTPRIKA  433 (504)
Q Consensus       414 ~~---dg~----------i~iwd~~~~~~~~~~  433 (504)
                      +.   |..          -.++|+...+...+.
T Consensus       453 nK~skdrfl~vGpl~pen~QlidIsGdkM~lv~  485 (638)
T 3sbq_A          453 SKFSKDRFLPVGPLHPENDQLIDISGDEMKLVH  485 (638)
T ss_dssp             ESCCTTSSCCCSSSCCEEEEEEECSSSSCEEEE
T ss_pred             cccccccCcCCCCCCCCcceeEecCCCceEEEe
Confidence            54   332          477888765544443

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.72  E-value=0.41  Score=45.22  Aligned_cols=101  Identities=14%  Similarity=0.199  Sum_probs=67.3

Q ss_pred             eEEEEEcCCCCEEEEeeC-CCcEEEeeCCCC------C-----cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188        398 IRSVKLLPDGRTLIVGGE-ASNLSIWDLASP------T-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  465 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~------~-----~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i  465 (504)
                      ...+.++|||+++++++. +.++.++|++.-      +     .....+.. -.......+|.++|.-..+---|..|..
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk  403 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK  403 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence            447889999999887664 678999998731      1     11111222 2233567899999965556668999999


Q ss_pred             EEcCCc----------ceEEEEeecCCceEEEEE------ccCCCEEEEec
Q psy17188        466 WDLHNQ----------TLVRQFQGHTDGASCIDI------SADGTKLWTGG  500 (504)
Q Consensus       466 wd~~~~----------~~~~~~~~h~~~v~~~~~------s~d~~~l~s~s  500 (504)
                      |++...          ..+.++.-|-. +-.+.-      .+||++|++..
T Consensus       404 Wni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          404 WNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             EEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred             EeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence            998653          45666665543 233322      67999999864

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.46  E-value=0.34  Score=51.38  Aligned_cols=224  Identities=9%  Similarity=0.132  Sum_probs=123.7

Q ss_pred             CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCC
Q psy17188        224 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       224 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      ...|.|.|+.++..+.+..   -..-+.-.+|..+.|+.-. ..++.++|+++.+                .+.......
T Consensus        47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~----------------klks~~~~e  106 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKS----------------KMKAHTMTD  106 (1630)
T ss_pred             CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhh----------------hhcccccCC
Confidence            3478899998876542221   1122334677776666554 6799999998765                333344445


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc----CCCceeeEEECCCCCCceeeec-----cCCCeEEE
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----SAPACYALAISPDSKSPFFSSH-----HYKSCVKV  374 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~-----~~~~~i~i  374 (504)
                      .|.-=.|-.+... +.. .+..|+-|++.... .+...+..    ....|..-..+++.++.+++.-     .-.|.+.+
T Consensus       107 ~VvfWkWis~~~l-~lV-T~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL  183 (1630)
T 1xi4_A          107 DVTFWKWISLNTV-ALV-TDNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL  183 (1630)
T ss_pred             CceEEEecCCCee-EEE-cCCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence            5665666655443 333 23579999996422 22222222    2457778888888887443322     24578999


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEc--C-CCCEEEEeeC---CCcEEEeeCCCC---Cccee-----eccc--CC
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLL--P-DGRTLIVGGE---ASNLSIWDLASP---TPRIK-----AELT--SS  438 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~-~g~~l~~~~~---dg~i~iwd~~~~---~~~~~-----~~~~--~~  438 (504)
                      |..+.......      .+|......+...  + ....++.+..   .+.++|.++...   .+...     ..++  ..
T Consensus       184 yS~er~~sQ~i------egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~  257 (1630)
T 1xi4_A          184 YSVDRKVSQPI------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ  257 (1630)
T ss_pred             eecccccchhh------hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccc
Confidence            98875432111      0111111111111  1 1122222211   267888888543   11110     0111  11


Q ss_pred             CCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEE
Q psy17188        439 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ  476 (504)
Q Consensus       439 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~  476 (504)
                      ..-..++..++.-..+..-+.-|.|++||+.++.++..
T Consensus       258 ~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~  295 (1630)
T 1xi4_A          258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM  295 (1630)
T ss_pred             cCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence            22234667788778888889999999999999987643

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.46  E-value=0.6  Score=43.86  Aligned_cols=110  Identities=15%  Similarity=0.199  Sum_probs=61.6

Q ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEeecC------CCCCeEEEEEccC---CCEEEEEcC-------
Q psy17188        204 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQG------HTDGASCIDISAD---GTKLWTGGL-------  265 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~------h~~~v~~~~~~~~---~~~l~s~~~-------  265 (504)
                      .....|+|.|+|+++++-...+.|++++..+++.  +..+..      .......|+|+|+   +..|+....       
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            3467999999998776654434788888655543  222321      2456789999995   445544432       


Q ss_pred             ------CCeEEEEECCCC--ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        266 ------DNTVRSWDLREG--CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       266 ------dg~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                            ...|..++...+  .+.....       .+..+. .........++|.|||.+.++.+
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~-------i~~~~p-~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVD-------LLAGLP-SSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEE-------EEEEEC-CCSSCCEEEEEECTTSCEEEEEC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEE-------EEEcCC-CCCCCCCCeEeECCCCeEEEEEC
Confidence                  235555655432  1100000       000011 01123478999999998777654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.74  E-value=0.42  Score=42.60  Aligned_cols=113  Identities=14%  Similarity=0.130  Sum_probs=67.4

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE--CC-CCCEEEEE-eCCCcEEEEECCCCeEEEeecC----
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI--SP-DSKVCFSC-CSDGNIAVWDLHNQTLVRQFQG----  243 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~----  243 (504)
                      ..+++++.||.|.-+|.++++........ ...++....-  .+ ++..++.. +.||.|..++..+|.....+..    
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            46788889999999998887755444333 1112211110  01 23333333 5899999999988865544321    


Q ss_pred             CCCCeEE---EEE-c----cCCCEEEEEcCCCeEEEEECCCCceEEEeecC
Q psy17188        244 HTDGASC---IDI-S----ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQ  286 (504)
Q Consensus       244 h~~~v~~---~~~-~----~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~  286 (504)
                      ...++..   ... .    ..+..+++++.+|.+...|+++|+. +|....
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~~  139 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFGP  139 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEEST
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEec
Confidence            1222221   000 0    1345889999999999999999985 455543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.49  E-value=1.7  Score=40.83  Aligned_cols=110  Identities=14%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             cEEEEEEcCCCc--EEEEecCCeEEEEeCCCCCCCCceeeeee-c------CCCCceEEEEEccC----CCEEEEecC--
Q psy17188        115 VVCAVTISNPTK--YVYTGGKGCVKVWDISQPGSKTPVSQLDC-L------QRDNYIRSVKLLPD----GRTLIVGGE--  179 (504)
Q Consensus       115 ~V~~v~~s~~~~--~l~~~~d~~i~vw~~~~~~~~~~~~~~~~-~------~~~~~v~~~~~s~~----~~~l~~~~~--  179 (504)
                      .-..|+|.|++.  ++++-..|.|++++.+......++..+.. .      ........|+|+|+    +.+.++-+.  
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~   94 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ   94 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence            347899999985  88887799999997543211222222210 0      12467889999996    333333221  


Q ss_pred             C----------CcEEEEeCCCC--------Cccceeeee--cCcCceEEEEECCCCCEEEEEeCC
Q psy17188        180 A----------SNLSIWDLASP--------TPRIKAELT--SSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       180 d----------g~i~iw~~~~~--------~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                      +          ..|.-|.+...        +.+.+..+.  .....-..|+|.|||.+.++.+..
T Consensus        95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred             CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence            1          13545665432        111122222  122336789999999876665543

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=95.07  E-value=2  Score=39.35  Aligned_cols=306  Identities=8%  Similarity=0.009  Sum_probs=132.3

Q ss_pred             CEEEEecCCCcEEEEeCCC--CCccceeeeecCcCceEEEEECC-CCCEEEEEeCCC----cEEEEECCCCeEEEeec--
Q psy17188        172 RTLIVGGEASNLSIWDLAS--PTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDG----NIAVWDLHNQTLVRQFQ--  242 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~--  242 (504)
                      ..|.+|...| +.+++...  ....... .......|.+|++.| +...|.++...|    .|...+ +.++.-..+.  
T Consensus        23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~-~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~   99 (394)
T 3b7f_A           23 VMLLVATIKG-AWFLASDPARRTWELRG-PVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP   99 (394)
T ss_dssp             CEEEEEETTE-EEEEEECTTSCSEEEEE-EESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred             CEEEEEecCc-eEEEECCCCCCCceECC-ccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence            4566777666 55555433  1222111 112245699999998 333444454444    343332 2232211111  


Q ss_pred             ----C--------CCCCeEEEEEcc-C-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc-ce-----ecccC
Q psy17188        243 ----G--------HTDGASCIDISA-D-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ-LD-----CLQRD  302 (504)
Q Consensus       243 ----~--------h~~~v~~~~~~~-~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~  302 (504)
                          .        ....|.++++.| + ...|..+...+.|...+-.............   .+... ..     .....
T Consensus       100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~---~p~~~~~~~~~~~g~~~~  176 (394)
T 3b7f_A          100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFND---HPMRRAWTGGEQDGTPDG  176 (394)
T ss_dssp             CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHT---CTTHHHHHCCC----CCC
T ss_pred             ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccC---CccccccccccccCCCCC
Confidence                1        112577888886 2 4566666656655554332222211100000   00000 00     00123


Q ss_pred             CceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceee-ecc---------CCCceeeEEECCCCCCceeeeccCCCe
Q psy17188        303 NYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAE-LTS---------SAPACYALAISPDSKSPFFSSHHYKSC  371 (504)
Q Consensus       303 ~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~  371 (504)
                      ..+.++.++|. ...|+++..++.|...+-.......... ...         ....+..+.+.|.... .+..+...+ 
T Consensus       177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~-~l~vg~~~g-  254 (394)
T 3b7f_A          177 PKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPD-ILYQQNHCG-  254 (394)
T ss_dssp             CEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTT-EEEEEETTE-
T ss_pred             CceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCC-EEEEEcCCe-
Confidence            45788999883 4455555544444443322222111110 000         0124788888886433 233333333 


Q ss_pred             EEEEecCCCCCCCccccccc-ccC--CCceEEEEEcC-CCCEEEEeeC-----------CCcEEEeeCCCCCccee-ec-
Q psy17188        372 VKVWDISQPGSKTPVSQLDC-LQR--DNYIRSVKLLP-DGRTLIVGGE-----------ASNLSIWDLASPTPRIK-AE-  434 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~-~~~--~~~i~~~~~s~-~g~~l~~~~~-----------dg~i~iwd~~~~~~~~~-~~-  434 (504)
                      |...+-  ...  ....... ...  ...+..++++| +...|.++..           ++...+|...++-.... .. 
T Consensus       255 l~~s~D--~G~--tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~  330 (394)
T 3b7f_A          255 IYRMDR--REG--VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR  330 (394)
T ss_dssp             EEEEET--TTT--EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB
T ss_pred             EEEeCC--CCC--cceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC
Confidence            333321  111  1111110 111  13456788876 3334444431           23345565444211111 11 


Q ss_pred             -ccCCCC----ceeEEEECCC-CCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEc
Q psy17188        435 -LTSSAP----ACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  490 (504)
Q Consensus       435 -~~~~~~----~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s  490 (504)
                       +.....    ....++++|. ...|+.++.++.|..- ...|+.-..+..+-..+.++.|.
T Consensus       331 glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          331 GLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             TSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred             CCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence             111110    1135788874 3456666666655432 23455545555455567787764

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=94.49  E-value=2.4  Score=37.56  Aligned_cols=275  Identities=10%  Similarity=0.038  Sum_probs=131.4

Q ss_pred             CEEEEEeCCCcEEEEECCCC---------eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE---CCCCceEEEe
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQ---------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD---LREGCVKVWD  283 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd---~~~~~~~~~~  283 (504)
                      ..+++.+.+|.|+--.+++-         ..-..++ ....+..+........|+.-+..|.++...   +.....    
T Consensus         4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r----   78 (327)
T 3uc1_A            4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASR----   78 (327)
T ss_dssp             EEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCS----
T ss_pred             cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCc----
Confidence            46778888888886654321         1111122 223444444444444555555666554433   221100    


Q ss_pred             ecCCCCCCCcccceecccCCceEEEE-EcC--CCCEEEEEeCCCcEEEEeCCCCCc-----cceeeeccCCCceeeEEEC
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVK-LLP--DGRTLIVGGEASNLSIWDLASPTP-----RIKAELTSSAPACYALAIS  355 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~--~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~~~~~~~~~i~~~~~~  355 (504)
                         .....++..+........|..+. ...  +..++++.+.+|.++...+.....     .....+... ..+..+...
T Consensus        79 ---~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~  154 (327)
T 3uc1_A           79 ---TARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLC  154 (327)
T ss_dssp             ---SSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEE
T ss_pred             ---cCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEe
Confidence               00001111111122344555544 432  578999999999999887654221     112223332 344444444


Q ss_pred             CCCCCceeeeccCCCeEEEEecC--CCCCC----CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC--
Q psy17188        356 PDSKSPFFSSHHYKSCVKVWDIS--QPGSK----TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--  427 (504)
Q Consensus       356 ~~~~~~~~~~~~~~~~i~i~d~~--~~~~~----~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~--  427 (504)
                      ....  .++..+..|.+..+...  .-...    .-...+. ......|..+...+++..|+..+..|.++.-.+..-  
T Consensus       155 ~~~d--~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~-L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~  231 (327)
T 3uc1_A          155 SAGD--DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMR-FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPV  231 (327)
T ss_dssp             CTTC--EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSC-CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred             cCCC--EEEEEECCCeEEEEECcccccCcCCcCCCCeeeec-CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence            3333  35555567777777665  21111    1111111 234566777777777778999999999888765422  


Q ss_pred             -----CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcce---------EEEEeecCCceEEEEEcc-C
Q psy17188        428 -----TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---------VRQFQGHTDGASCIDISA-D  492 (504)
Q Consensus       428 -----~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~---------~~~~~~h~~~v~~~~~s~-d  492 (504)
                           +......+......+..+....+...++..+.+|.+..++...-..         +-.+. ..+.|.++...+ +
T Consensus       232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~-~~d~vv~~~~~~~~  310 (327)
T 3uc1_A          232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLG-EGDTLLAIARNAEE  310 (327)
T ss_dssp             CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCC-TTCCEEEEEECC--
T ss_pred             cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecC-CCCEEEEEEEcCCC
Confidence                 1222233332223344444444555677777888887777643211         11122 234566665544 3


Q ss_pred             CCEEEEecCCC
Q psy17188        493 GTKLWTGGLDN  503 (504)
Q Consensus       493 ~~~l~s~s~Dg  503 (504)
                      ...+.+.+++|
T Consensus       311 ~~~~~~~~~~g  321 (327)
T 3uc1_A          311 SGDDNAVDANG  321 (327)
T ss_dssp             -----------
T ss_pred             cceEEEEecCC
Confidence            45566666654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.43  E-value=3.3  Score=38.83  Aligned_cols=52  Identities=12%  Similarity=0.134  Sum_probs=34.3

Q ss_pred             ceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe---EEEeec---------CCCCCeEEEEEccC
Q psy17188        205 ACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT---LVRQFQ---------GHTDGASCIDISAD  256 (504)
Q Consensus       205 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~---------~h~~~v~~~~~~~~  256 (504)
                      .-+.|+|.||+. .|+++...|.|++++.....   .+..+.         ........|+++|+
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            357899999996 45556788999999754221   112111         11457889999996

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=94.00  E-value=5.5  Score=39.74  Aligned_cols=241  Identities=12%  Similarity=0.150  Sum_probs=117.6

Q ss_pred             EEEE-ECCCCCEEEEE-eCCC----cEEEEECCCCeEEEe-ecCCCC--------CeEEEEEccCCCEEEEE--------
Q psy17188        207 YALA-ISPDSKVCFSC-CSDG----NIAVWDLHNQTLVRQ-FQGHTD--------GASCIDISADGTKLWTG--------  263 (504)
Q Consensus       207 ~~~~-~s~~~~~l~~~-~~dg----~i~iwd~~~~~~~~~-~~~h~~--------~v~~~~~~~~~~~l~s~--------  263 (504)
                      ..+. ++|++++++.+ +..|    .++++|+.+++.+.. +. ...        ....++|..+...+++.        
T Consensus       132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~  210 (711)
T 4hvt_A          132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT  210 (711)
T ss_dssp             EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred             eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence            3444 88998866644 3333    599999999987642 22 111        11344777444344432        


Q ss_pred             --cCCCeEEEEECCCCc---eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE-----EEEEeCC---CcEEEEe
Q psy17188        264 --GLDNTVRSWDLREGC---VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT-----LIVGGEA---SNLSIWD  330 (504)
Q Consensus       264 --~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d---g~i~v~d  330 (504)
                        +....|+.|.+.+..   ..++..               ...........++++++     ++..+.+   ..+.+.+
T Consensus       211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~---------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  275 (711)
T 4hvt_A          211 SSLYPNSLYIWKRGESIEKAKKLFEV---------------PKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILD  275 (711)
T ss_dssp             TTSSBCEEEEEETTSCGGGCEEEEEC---------------CTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEE
T ss_pred             cCCCCCEEEEEECCCChHHCeEEecc---------------CCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEc
Confidence              112467777776542   111111               11122234555666652     3333212   3456666


Q ss_pred             CCCCCccceeeeccCCCceeeEEECCCCCCceeeecc---------CCCeEEEEecCCCCC----CCcccccccccCCCc
Q psy17188        331 LASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH---------YKSCVKVWDISQPGS----KTPVSQLDCLQRDNY  397 (504)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~~~i~i~d~~~~~~----~~~~~~~~~~~~~~~  397 (504)
                      ........ ..+.... . ..+....++. +++.+..         ..+.|...++.....    ......+-.......
T Consensus       276 ~~~~~~~~-~~l~~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (711)
T 4hvt_A          276 TKYKNLKL-QKINMPS-D-ATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEV  351 (711)
T ss_dssp             CSSSSCEE-EECCSCT-T-CEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEE
T ss_pred             CCCCCCcc-eEeecCC-c-ceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCe
Confidence            55322221 1111111 1 1122333433 1222221         466788888876421    111111112233556


Q ss_pred             eEEEEEcCCCCEEEEeeCCCc--EEEeeCCCCC-ccee-ecccCCCCceeEEEECCCCCEE-EEeeC---CCcEEEEEcC
Q psy17188        398 IRSVKLLPDGRTLIVGGEASN--LSIWDLASPT-PRIK-AELTSSAPACYALAISPDSKVC-FSCCS---DGNIAVWDLH  469 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~~~dg~--i~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~~~~~l-~s~~~---dg~i~iwd~~  469 (504)
                      +..+.+..+ .++++...++.  |.++++.+++ .... ..+.. ...+.....++++..+ ++.+.   -+.+..+|+.
T Consensus       352 l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          352 FNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             EEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             EEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            778899876 56777777765  6777765553 1111 22332 2346666666776544 44332   3678888876

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=92.49  E-value=9.4  Score=38.08  Aligned_cols=229  Identities=9%  Similarity=0.099  Sum_probs=114.3

Q ss_pred             EEEE-EccCCCEEEEE-cCC----CeEEEEECCCCceEEEeecCCCCCCCcccce-eccc----CCceEEEEEcCCCCEE
Q psy17188        249 SCID-ISADGTKLWTG-GLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLD-CLQR----DNYIRSVKLLPDGRTL  317 (504)
Q Consensus       249 ~~~~-~~~~~~~l~s~-~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~l  317 (504)
                      ..+. ++|++++++.+ |..    ..++++|+.+++..-    .        .+. ....    ......++|..+ ..+
T Consensus       132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~----~--------~~~~~~k~~~~~~~~~~~~~W~d~-~~~  198 (711)
T 4hvt_A          132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK----N--------GFEPITNSGKLLEGKFTYPTWINK-DTI  198 (711)
T ss_dssp             EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT----T--------CSCCBCTTCCBCCEETCCEEEEET-TEE
T ss_pred             eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC----C--------CcccccccccccccccceeeEECC-CEE
Confidence            3444 77888866543 222    379999999987420    0        000 0000    001234467633 334


Q ss_pred             EEEe-----------CCCcEEEEeCCCCCccceeeeccCCCc-eeeEEECCCCCCc---eeeecc---CCCeEEEEecCC
Q psy17188        318 IVGG-----------EASNLSIWDLASPTPRIKAELTSSAPA-CYALAISPDSKSP---FFSSHH---YKSCVKVWDISQ  379 (504)
Q Consensus       318 ~~~~-----------~dg~i~v~d~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~---~~~~~~---~~~~i~i~d~~~  379 (504)
                      +.+.           ....++.|.+-+....-...+...... ......+++++..   ++++.+   ....+.+.+...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  278 (711)
T 4hvt_A          199 IFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY  278 (711)
T ss_dssp             EECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS
T ss_pred             EEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC
Confidence            4332           124588888876643333333333222 3345567777652   344322   234566666543


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEee----------CCCcEEEeeCCCCC------cce-eecccCCCCce
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------EASNLSIWDLASPT------PRI-KAELTSSAPAC  442 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----------~dg~i~iwd~~~~~------~~~-~~~~~~~~~~v  442 (504)
                      ...  ....+.. ....   .+..+.++.+++...          ..+.|...++.++.      ... ..........+
T Consensus       279 ~~~--~~~~l~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  352 (711)
T 4hvt_A          279 KNL--KLQKINM-PSDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVF  352 (711)
T ss_dssp             SSC--EEEECCS-CTTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEE
T ss_pred             CCC--cceEeec-CCcc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeE
Confidence            211  1111111 1111   223444665555331          36678889887631      111 11223345567


Q ss_pred             eEEEECCCCCEEEEeeCCCc--EEEEEcCCcc-eEEE-Eeec-CCceEEEEEccCCCEEE
Q psy17188        443 YALAISPDSKVCFSCCSDGN--IAVWDLHNQT-LVRQ-FQGH-TDGASCIDISADGTKLW  497 (504)
Q Consensus       443 ~~l~~s~~~~~l~s~~~dg~--i~iwd~~~~~-~~~~-~~~h-~~~v~~~~~s~d~~~l~  497 (504)
                      ..+.+..+ .++++...++.  ++++++.+++ .+.. +.-. .+.+....+++++..++
T Consensus       353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~  411 (711)
T 4hvt_A          353 NFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL  411 (711)
T ss_dssp             EEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred             EEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence            78888876 57777777764  6677776664 2333 3211 24566666667665443

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=91.10  E-value=8.5  Score=34.78  Aligned_cols=184  Identities=13%  Similarity=0.117  Sum_probs=95.0

Q ss_pred             cEEEEECCCC--eEEEeecC------CCCCeEEEEEc---cC----CCEEE-EEcCCCeEEEEECCCCceEEEeecCCCC
Q psy17188        226 NIAVWDLHNQ--TLVRQFQG------HTDGASCIDIS---AD----GTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGS  289 (504)
Q Consensus       226 ~i~iwd~~~~--~~~~~~~~------h~~~v~~~~~~---~~----~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~  289 (504)
                      .|.+||+.++  +.++++.-      ....+..+.+.   |+    +.++. +=+..+-|.++|+.+++.....-.....
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p  203 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA  203 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred             eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence            5777888888  77776643      23457778777   22    23333 3345678999999998754332111000


Q ss_pred             CCCccccee----cccCCceEEEEEcCC----CCEEEEEeCCCcEEEEeC-----CCCCccceeeeccCC---CceeeEE
Q psy17188        290 KTPVSQLDC----LQRDNYIRSVKLLPD----GRTLIVGGEASNLSIWDL-----ASPTPRIKAELTSSA---PACYALA  353 (504)
Q Consensus       290 ~~~~~~~~~----~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~v~d~-----~~~~~~~~~~~~~~~---~~i~~~~  353 (504)
                      . .......    ..-...+..++++|+    ++.|......+. ++|.+     +........+..+..   .....++
T Consensus       204 d-~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~  281 (381)
T 3q6k_A          204 E-RPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA  281 (381)
T ss_dssp             C-SCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred             c-cCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence            0 0001111    112356899999998    788887765542 33332     222111111111112   2333455


Q ss_pred             EC-CCCCCceeeeccCCCeEEEEecCC-CCCCCcccccccccCCCceEEEEEcCCCCEEEEe
Q psy17188        354 IS-PDSKSPFFSSHHYKSCVKVWDISQ-PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG  413 (504)
Q Consensus       354 ~~-~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~  413 (504)
                      +. .+|.  ++.+--....|..|+... .-.......+.....-.....+.+.++|.+.+..
T Consensus       282 ~D~~~G~--ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s  341 (381)
T 3q6k_A          282 YDPKTKV--IFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS  341 (381)
T ss_dssp             ECTTTCE--EEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred             EeCCCCe--EEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence            54 4454  777888889999999764 2111111222111223345566666665544443

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=90.18  E-value=11  Score=34.42  Aligned_cols=158  Identities=12%  Similarity=0.078  Sum_probs=76.5

Q ss_pred             CCcEEEEEEcC--CCcEEEEecCC----eEEEEeCCCCCCCCceeeee-ecC--------CCCceEEEEEcc-C-CCEEE
Q psy17188        113 GEVVCAVTISN--PTKYVYTGGKG----CVKVWDISQPGSKTPVSQLD-CLQ--------RDNYIRSVKLLP-D-GRTLI  175 (504)
Q Consensus       113 ~~~V~~v~~s~--~~~~l~~~~d~----~i~vw~~~~~~~~~~~~~~~-~~~--------~~~~v~~~~~s~-~-~~~l~  175 (504)
                      ...|.+|++.|  ++.+.+.+..+    .|... .+.+..-..+.... ...        ....|.++++.| + ...|.
T Consensus        54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  132 (394)
T 3b7f_A           54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY  132 (394)
T ss_dssp             TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred             CCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence            45799999998  66777666554    33332 22222112111100 001        123588899987 2 45566


Q ss_pred             EecCCCcEEEEeCCCCCccceeeee----------------cCcCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEE
Q psy17188        176 VGGEASNLSIWDLASPTPRIKAELT----------------SSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLV  238 (504)
Q Consensus       176 ~~~~dg~i~iw~~~~~~~~~~~~~~----------------~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~  238 (504)
                      ++...+.|...+-............                .....+.+|.+.|. ...|+.+..++.|...+ +.++.-
T Consensus       133 ~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW  211 (394)
T 3b7f_A          133 AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDW  211 (394)
T ss_dssp             EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSC
T ss_pred             EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCc
Confidence            6655565554432222221111110                11235788999873 34455554444444332 222221


Q ss_pred             EeecC-----C--------CCCeEEEEEccC-CCEEEEEcCCCeEEEEE
Q psy17188        239 RQFQG-----H--------TDGASCIDISAD-GTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       239 ~~~~~-----h--------~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd  273 (504)
                      ..+..     +        ...+.++.+.|+ ...|+.+...+ |...+
T Consensus       212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~  259 (394)
T 3b7f_A          212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD  259 (394)
T ss_dssp             EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred             eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence            21110     0        124889999985 35666666544 44444

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=88.67  E-value=14  Score=33.49  Aligned_cols=155  Identities=10%  Similarity=0.127  Sum_probs=79.8

Q ss_pred             CceEEEEEc---CC----CCEEEEEe-CCCcEEEEeCCCCCccceee------------eccC----CCceeeEEECCC-
Q psy17188        303 NYIRSVKLL---PD----GRTLIVGG-EASNLSIWDLASPTPRIKAE------------LTSS----APACYALAISPD-  357 (504)
Q Consensus       303 ~~v~~~~~~---~~----~~~l~~~~-~dg~i~v~d~~~~~~~~~~~------------~~~~----~~~i~~~~~~~~-  357 (504)
                      ..+..+.+.   |+    +.++..+. ...-|.|+|+.+++......            ..+.    ...+..++++|+ 
T Consensus       152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~  231 (381)
T 3q6k_A          152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD  231 (381)
T ss_dssp             GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred             CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence            456777777   22    34444443 45679999998764322111            0110    236788999998 


Q ss_pred             ---CCCceeeeccCCCeEEEEe---cCCCCCCCcccccccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCCC-CC-
Q psy17188        358 ---SKSPFFSSHHYKSCVKVWD---ISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLAS-PT-  428 (504)
Q Consensus       358 ---~~~~~~~~~~~~~~i~i~d---~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~~-~~-  428 (504)
                         ++.+++...+. ..+.--.   ++.......+..+........-..+++. .+|.++++--....|..|+..+ .- 
T Consensus       232 ~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~  310 (381)
T 3q6k_A          232 SEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLR  310 (381)
T ss_dssp             TTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBC
T ss_pred             CCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccc
Confidence               55444433332 2222222   2222222222222111111233456775 6777777777788899999875 11 


Q ss_pred             --cceeecccCCCCceeEEEECCCCCEEEEee
Q psy17188        429 --PRIKAELTSSAPACYALAISPDSKVCFSCC  458 (504)
Q Consensus       429 --~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~  458 (504)
                        ..........-.....+.+.+++.+.+..+
T Consensus       311 ~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn  342 (381)
T 3q6k_A          311 MKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN  342 (381)
T ss_dssp             GGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred             cCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence              111111222444567778877777666554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=87.98  E-value=24  Score=36.63  Aligned_cols=39  Identities=15%  Similarity=0.152  Sum_probs=33.6

Q ss_pred             CceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188        440 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  478 (504)
                      ..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus       236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            356777888889999999999999999999999887654

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=86.42  E-value=18  Score=32.55  Aligned_cols=207  Identities=12%  Similarity=0.048  Sum_probs=109.3

Q ss_pred             ccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEe---
Q psy17188        254 SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD---  330 (504)
Q Consensus       254 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d---  330 (504)
                      -|+..++++.+.+|.|+--.+..-..     .... ........ ....+.+..+........|+..+..|.++.+.   
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~-----~~r~-g~g~~~~~-lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~e   76 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRA-----QRRG-GRGRSAAS-TKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQ   76 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHH-----TCCC-CCCSEEEE-CSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGG
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhh-----hccC-CCCceecc-cCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHH
Confidence            46777899999999999875432110     0000 00000111 23355666666666667777778888866654   


Q ss_pred             CCCCC----ccc---eeeeccCCCceeeEEECCC-CCCceeeeccCCCeEEEEecCCCCC--CCcccccccccCCCceEE
Q psy17188        331 LASPT----PRI---KAELTSSAPACYALAISPD-SKSPFFSSHHYKSCVKVWDISQPGS--KTPVSQLDCLQRDNYIRS  400 (504)
Q Consensus       331 ~~~~~----~~~---~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~~~~~~i~~  400 (504)
                      +....    ...   ...+. ....|..+....+ .....++..+..|.++...+..-..  ..-...+... ....+..
T Consensus        77 ip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~-~~d~lv~  154 (370)
T 3l6v_A           77 LPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD-EGDALVG  154 (370)
T ss_dssp             SCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC-TTCCEEE
T ss_pred             CcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC-CCCEEEE
Confidence            33221    111   11122 2334554443321 1222677778899999888654322  1122222222 2445555


Q ss_pred             EEEcCCCCEEEEeeCCCcEEEeeCCCCC-------cceeecccCCCCceeEEEECC------------------------
Q psy17188        401 VKLLPDGRTLIVGGEASNLSIWDLASPT-------PRIKAELTSSAPACYALAISP------------------------  449 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~------------------------  449 (504)
                      +....+...|+..+.+|.+..++...-.       -.....+.. ...|.++...+                        
T Consensus       155 v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~  233 (370)
T 3l6v_A          155 VALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGA  233 (370)
T ss_dssp             EEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC----------------------
T ss_pred             EEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEeccccccccccccccccccccccccc
Confidence            5555555678888888987777654211       111222222 23344444333                        


Q ss_pred             -----------CCCEEEEeeCCCcEEEEEcCC
Q psy17188        450 -----------DSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       450 -----------~~~~l~s~~~dg~i~iwd~~~  470 (504)
                                 ++..|++.+..|..+...+..
T Consensus       234 ~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e  265 (370)
T 3l6v_A          234 EPAVIDVADNGDVAYILTATENGYGKRTPLAE  265 (370)
T ss_dssp             -------------CEEEEEETTSEEEEEEGGG
T ss_pred             cccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence                       456888999999988887643

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=83.40  E-value=23  Score=31.23  Aligned_cols=167  Identities=10%  Similarity=0.110  Sum_probs=94.1

Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEE---eCCCCCcc----c---eeeeecCcCceEEE-EECC--CCCEEEEEeCCC
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIW---DLASPTPR----I---KAELTSSAPACYAL-AISP--DSKVCFSCCSDG  225 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw---~~~~~~~~----~---~~~~~~~~~~v~~~-~~s~--~~~~l~~~~~dg  225 (504)
                      .+.+..+........|+.-+..|.++-.   ++......    .   ...+.. ...|..+ ....  +..+++..+.+|
T Consensus        41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G  119 (327)
T 3uc1_A           41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNG  119 (327)
T ss_dssp             GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred             CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCC
Confidence            4455555555566666666667776544   44332111    0   112222 3345544 4432  567999999999


Q ss_pred             cEEEEECCCC-------eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        226 NIAVWDLHNQ-------TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       226 ~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      .++--.+..-       .....++. ...+..+........|+..+..|.+..+.....++...    .........+. 
T Consensus       120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~----gr~a~Gv~~i~-  193 (327)
T 3uc1_A          120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPM----GRATSGVQGMR-  193 (327)
T ss_dssp             EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCC----CTTSBCEESSC-
T ss_pred             EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcC----CcCCCCeeeec-
Confidence            9999887542       22223343 34455555555556788888888888887662111100    00001111122 


Q ss_pred             cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      ......|.++...+++..++..+..|.++.-.+.
T Consensus       194 L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~  227 (327)
T 3uc1_A          194 FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE  227 (327)
T ss_dssp             CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence            2345567777776777789999999998887654

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=83.39  E-value=21  Score=30.70  Aligned_cols=222  Identities=13%  Similarity=0.089  Sum_probs=111.2

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR  194 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  194 (504)
                      .|..|+....-.+++ . ||.|..|-......... ..    .....|..++...+- .++. . ||.|+.|-.......
T Consensus        25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~-p~----~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql   94 (282)
T 3qhy_B           25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTM-PA----ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT   94 (282)
T ss_dssp             SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSC-CG----GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT
T ss_pred             CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCC-Cc----cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC
Confidence            345555544333333 3 78888887654332211 10    112356677665433 2333 4 899999976542211


Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEEC
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDL  274 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~  274 (504)
                      -.  ...-...|..++...+  ..+.-. ||.|+.|-......+..-......|..++...+.  .+.-. ||.|..|-.
T Consensus        95 g~--P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~  166 (282)
T 3qhy_B           95 TV--PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGD  166 (282)
T ss_dssp             CC--CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEEC
T ss_pred             CC--CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecC
Confidence            00  0011235777776544  333344 8999999765422111111123457776665433  22233 788998876


Q ss_pred             CCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        275 REG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       275 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      ... ++.          .+      ......|..++...+.. ++.  .+|.++.|-.......-. . ......+..++
T Consensus       167 n~~gqlg----------~p------~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~-p-~~~~~~v~~i~  225 (282)
T 3qhy_B          167 NYFGQTT----------VP------AEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTV-P-TEALSGVSAIA  225 (282)
T ss_dssp             CTTSTTS----------CC------GGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCC-C-GGGGSSCCEEE
T ss_pred             CCCCCCC----------Cc------eecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCC-C-cccCCCceEEE
Confidence            542 210          00      01124567776654433 333  589999997654321111 1 11122466666


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .....   .++..  ++.+..|-....
T Consensus       226 ~G~~h---~~al~--~g~v~~wG~n~~  247 (282)
T 3qhy_B          226 SGEWY---SLALK--NGKVIAWGSSRT  247 (282)
T ss_dssp             ECSSC---EEEEE--TTEEEEESTTCC
T ss_pred             cCCCE---EEEEE--CCEEEEecCCCC
Confidence            54433   23333  889999976543

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=82.94  E-value=23  Score=30.89  Aligned_cols=246  Identities=11%  Similarity=0.090  Sum_probs=120.7

Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeEEE---------eecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEe
Q psy17188        213 PDSKVCFSCCSDGNIAVWDLHNQTLVR---------QFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD  283 (504)
Q Consensus       213 ~~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~  283 (504)
                      |+..++++.+.+|.|+--.+.+-+..+         .++ ....+..+........|+..+..|.++-+....       
T Consensus         1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~e-------   72 (307)
T 1zi0_A            1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQ-------   72 (307)
T ss_dssp             CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGG-------
T ss_pred             CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhH-------
Confidence            355678889999999887765432211         112 122333333333344555556666655443321       


Q ss_pred             ecCCCC---CCCcccceecccCCceEEEEEc---CCCCEEEEEeCCCcEEEEeCCCCC-----ccceeeeccCCCceeeE
Q psy17188        284 ISQPGS---KTPVSQLDCLQRDNYIRSVKLL---PDGRTLIVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYAL  352 (504)
Q Consensus       284 ~~~~~~---~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~i~~~  352 (504)
                      ++....   ..+...+........|.++..-   .++.+++..+.+|.++...+....     ......+... ..+..+
T Consensus        73 lp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~  151 (307)
T 1zi0_A           73 LPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGV  151 (307)
T ss_dssp             SCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEE
T ss_pred             CcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEE
Confidence            111110   0111111112334456555432   356678899999999988764221     1122223333 344444


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCC----CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC-
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP-  427 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~-  427 (504)
                      ....+..  -++..+.+|.+..++...-...    .-...+. ......|..+....++..+++.+..|.++-.++..- 
T Consensus       152 ~~~~~~~--~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~-L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~  228 (307)
T 1zi0_A          152 DLTSGED--EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIR-LGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYP  228 (307)
T ss_dssp             EEECTTC--EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC-CCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSC
T ss_pred             EEeCCCC--EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEE-eCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhc
Confidence            4443333  3445556777777766432111    1111111 223456767766566667888889999888776321 


Q ss_pred             ------CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC
Q psy17188        428 ------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  470 (504)
Q Consensus       428 ------~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~  470 (504)
                            +......+......+..+....+...++..+.+|.+.-+++..
T Consensus       229 ~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~  277 (307)
T 1zi0_A          229 TKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE  277 (307)
T ss_dssp             CCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred             cCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence                  1112222333334444444433445566667777777666644

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=80.62  E-value=32  Score=30.95  Aligned_cols=245  Identities=13%  Similarity=0.050  Sum_probs=122.3

Q ss_pred             CCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEE
Q psy17188        212 SPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW  282 (504)
Q Consensus       212 s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~  282 (504)
                      -|+..++++.+.+|.|+--.+.+         +..-..++ ....+..+........|+..+..|.++.+....      
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~e------   76 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQ------   76 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHH------
Confidence            46777899999999998765432         12222333 344555555444455666666677665554321      


Q ss_pred             eecCCCC---CCCcccceecccCCceEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCC-----ccceeeeccCCCceee
Q psy17188        283 DISQPGS---KTPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYA  351 (504)
Q Consensus       283 ~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~i~~  351 (504)
                       ++..+.   ..+...+........|.++..-.   ++.+|+.++..|.++...+....     ......+.. ...+..
T Consensus        77 -ip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~  154 (370)
T 3l6v_A           77 -LPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVG  154 (370)
T ss_dssp             -SCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEE
T ss_pred             -CcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEE
Confidence             111100   00111111123344555554332   45689999999999988754321     122223333 234444


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCC----CcccccccccCCCceEEEEEcC----------------------
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSK----TPVSQLDCLQRDNYIRSVKLLP----------------------  405 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~----------------------  405 (504)
                      +.......  -++..+.+|.+..+....-...    .-...+. ......|..+...+                      
T Consensus       155 v~~~~~~~--~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~-L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~  231 (370)
T 3l6v_A          155 VALTDGDR--DVLLFASNGKTVRFGESTVRSMGRTATGVRGIR-LAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTD  231 (370)
T ss_dssp             EEEECSCC--EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC-CCTTCCEEEEEEECCC--------------------
T ss_pred             EEEeCCCc--eEEEEeCCCeEEEEEccccCccCCCCCCeeeEE-eCCCCEEEEEEEeccccccccccccccccccccccc
Confidence            44443333  3444556677766765431110    1111111 12334555554443                      


Q ss_pred             -------------CCCEEEEeeCCCcEEEeeCCCC-------CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEE
Q psy17188        406 -------------DGRTLIVGGEASNLSIWDLASP-------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV  465 (504)
Q Consensus       406 -------------~g~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~i  465 (504)
                                   ++..+++.+..|..+...+..-       +-+....+......+..+.+..+...++..+..|.+.-
T Consensus       232 g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR  311 (370)
T 3l6v_A          232 GAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVR  311 (370)
T ss_dssp             ---------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEE
T ss_pred             cccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEE
Confidence                         4567888899998888776421       11222233333334444443344455555667776666


Q ss_pred             EEc
Q psy17188        466 WDL  468 (504)
Q Consensus       466 wd~  468 (504)
                      ..+
T Consensus       312 ~~v  314 (370)
T 3l6v_A          312 TRG  314 (370)
T ss_dssp             EEG
T ss_pred             eeH
Confidence            654

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=80.37  E-value=30  Score=30.45  Aligned_cols=163  Identities=10%  Similarity=0.073  Sum_probs=88.9

Q ss_pred             CCCcEEEEEEcCCCcEEEEecCCeEEEEe---CCCCCCC---CceeeeeecCCCCceEEEEEcc---CCCEEEEecCCCc
Q psy17188        112 HGEVVCAVTISNPTKYVYTGGKGCVKVWD---ISQPGSK---TPVSQLDCLQRDNYIRSVKLLP---DGRTLIVGGEASN  182 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~---~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~  182 (504)
                      .+..+..+..+....+++..+.|.+.-..   +......   .++..+-.......|.++...+   ++.+|+..+.+|.
T Consensus        38 ~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~  117 (323)
T 1wp5_A           38 TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM  117 (323)
T ss_dssp             TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred             CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence            33444445555566777777778755544   4332211   1111111122344566543333   2667888999999


Q ss_pred             EEEEeCCCCC------ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCC
Q psy17188        183 LSIWDLASPT------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDG  247 (504)
Q Consensus       183 i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~  247 (504)
                      ++.-.+..-.      ......+... +.+..+....+...++..+.+|.+..++...         |.....+. ....
T Consensus       118 iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~  195 (323)
T 1wp5_A          118 VKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDY  195 (323)
T ss_dssp             EEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCC
T ss_pred             EEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCE
Confidence            9988775221      1112223332 4455555555556778888899988887643         11222222 2345


Q ss_pred             eEEEEEccCCC-EEEEEcCCCeEEEEECCC
Q psy17188        248 ASCIDISADGT-KLWTGGLDNTVRSWDLRE  276 (504)
Q Consensus       248 v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~  276 (504)
                      |.++...+++. .|++.+..|..+..++..
T Consensus       196 Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e  225 (323)
T 1wp5_A          196 IVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             EEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             EEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence            66665444444 677778888877776653

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=80.23  E-value=27  Score=29.88  Aligned_cols=199  Identities=13%  Similarity=0.074  Sum_probs=109.9

Q ss_pred             EEEEEcCCCcEEEEecCCeEEE---EeCCCCCCCCceeeeeecCCCCceEEEEEcc-CCCEEEEecCCCcEEEEeCCCCC
Q psy17188        117 CAVTISNPTKYVYTGGKGCVKV---WDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPT  192 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i~v---w~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  192 (504)
                      ..+..+....+++..++|.++-   |++.......    +  ......|..+.... +..+++..+.+|.++-..+..-.
T Consensus        28 ~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~----l--l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~  101 (276)
T 3no0_A           28 NILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS----L--KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE  101 (276)
T ss_dssp             EEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC----C--SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred             EEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc----c--CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence            3344445556777777777654   4443221111    2  23456676664422 56789999999999998876432


Q ss_pred             ----ccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC---------CeEEEeecCCCCCeEEEEEccCCCE
Q psy17188        193 ----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       193 ----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                          ......+.. .+.+..+....+...++..+.+|.+..++...         |.....+. ....|..+...+++..
T Consensus       102 ~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~  179 (276)
T 3no0_A          102 YKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPY  179 (276)
T ss_dssp             TCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSE
T ss_pred             hhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCE
Confidence                111122332 34455555555566788888999988887532         22222233 2355666655555668


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE--EeCC
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI--WDLA  332 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v--~d~~  332 (504)
                      ++..+..|.++...+..-...     .... .....+   ...+.+..+....+...++..+.+|.+..  ++..
T Consensus       180 ll~~T~~G~~kr~~~~e~~~~-----~R~g-kGv~~i---~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~  245 (276)
T 3no0_A          180 LLVITAKGRVKKISHEEIPKT-----NRGV-KGTEVS---GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK  245 (276)
T ss_dssp             EEEEETTSCEEEEEGGGSCCC-----CTTC-CCEECC---CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred             EEEEeCCCcEEEeEHHHcccC-----CCCC-cceEEE---cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence            888888998888876532110     0000 000011   22334444443334446666777788777  7654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	504
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-46
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-20
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	9e-28
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-22
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-27
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	8e-21
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-25
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-16
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-22
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-20
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-16
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-11
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-19
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-18
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-17
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	6e-18
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-17
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-11
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-11
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-10
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-16
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-12
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-11
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	4e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-16
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-12
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-16
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-14
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-15
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-13
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-07
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-13
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-13
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-12
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	9e-13
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-12
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	7e-12
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-06
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	1e-11
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	7e-10
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	5e-06
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	7e-11
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-10
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.002
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	1e-10
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	6e-10
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-06
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	0.003
d1jofa_	365	b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactoniz	4e-10
d1jofa_	365	b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactoniz	2e-07
d1jofa_	365	b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactoniz	5e-07
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	3e-08
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	2e-06
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	8e-07
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	3e-04
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	6e-04
d1xfda1	465	b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-lik	0.002

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (409), Expect = 4e-46
 Identities = 207/336 (61%), Positives = 235/336 (69%), Gaps = 30/336 (8%)

Query: 67  GIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTK 126
           G  G KPAYS+HVT DGQMQPVPFPPDALIGPGIPRHARQINTL+HGEVVCAVTISNPT+
Sbjct: 5   GAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTR 64

Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 186
           +VYTGGKGCVKVWDIS PG+K+PVSQLDCL RDNYIRS KLLPDG TLIVGGEAS LSIW
Sbjct: 65  HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124

Query: 187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 246
           DLA+PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD
Sbjct: 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184

Query: 247 GASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWD----------------------- 283
           GASCIDIS DGTKLWTGGLDNTVRSWDLREG                             
Sbjct: 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME 244

Query: 284 --ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE 341
               +        +      ++ + S+K    G+  +  G+ + L+ W         +++
Sbjct: 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK 304

Query: 342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI 377
            +SS     +  IS D K  +  +        V+++
Sbjct: 305 ESSS---VLSCDISVDDK--YIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (223), Expect = 1e-20
 Identities = 114/338 (33%), Positives = 142/338 (42%), Gaps = 50/338 (14%)

Query: 201 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL 260
            S PA Y+  ++ D ++         +    +           H +    + IS     +
Sbjct: 8   GSKPA-YSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHV 66

Query: 261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320
           +TGG           +GCVKVWDIS PG+K+PVSQLDCL RDNYIRS KLLPDG TLIVG
Sbjct: 67  YTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115

Query: 321 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP 380
           GEAS LSIWDLA+PTPRIKAELTSSAPACYALAISPDSK  F         V        
Sbjct: 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175

Query: 381 GSKTPVS----------------------------------QLDCLQRDNYIRSVKLLPD 406
             +                                      QL      + I S+   P 
Sbjct: 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235

Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  L VG E+SN+ +  +  P                +L  +   K   S   D  +  W
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPDKYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLLNAW 292

Query: 467 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
                  + Q    +      DIS D   + TG  D  
Sbjct: 293 RTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKK 329

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  111 bits (277), Expect = 9e-28
 Identities = 61/360 (16%), Positives = 117/360 (32%), Gaps = 30/360 (8%)

Query: 150 VSQLDCLQRD-----NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 204
           +S+LD L+++     N IR  +      TL         +I  +     R +  L     
Sbjct: 1   MSELDQLRQEAEQLKNQIRDARKACADATL----SQITNNIDPVGRIQMRTRRTLRGHLA 56

Query: 205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG 264
             YA+    DS++  S   DG + +WD +    V      +        +  G  +  GG
Sbjct: 57  KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116

Query: 265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 324
           LDN    ++L+     V    +    T          DN I +           +     
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176

Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
             +                        +++S    +  F S    +  K+WD+       
Sbjct: 177 TTTFTG----------------HTGDVMSLSLAPDTRLFVSGACDASAKLWDVR---EGM 217

Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 444
                     ++ I ++   P+G     G + +   ++DL +    +     +      +
Sbjct: 218 CRQTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275

Query: 445 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           ++ S   ++  +   D N  VWD           GH +  SC+ ++ DG  + TG  D+ 
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 94.8 bits (234), Expect = 5e-22
 Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 5/162 (3%)

Query: 112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG 171
            G+V+      +   +V        K+WD+                 ++ I ++   P+G
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVR---EGMCRQTFTG--HESDINAICFFPNG 238

Query: 172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231
                G + +   ++DL +    +     +      +++ S   ++  +   D N  VWD
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298

Query: 232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
                      GH +  SC+ ++ DG  + TG  D+ ++ W+
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 85.2 bits (209), Expect = 1e-18
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 17/161 (10%)

Query: 216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR 275
           ++  S   D +  +WD+      + F GH    + I    +G    TG  D T R +DLR
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256

Query: 276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 335
                +                       I SV     GR L+ G +  N ++WD     
Sbjct: 257 ADQELMTY-------------SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA--LK 301

Query: 336 PRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWD 376
                 L         L ++ D      ++  + S +K+W+
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGM--AVATGSWDSFLKIWN 340

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 6e-27
 Identities = 61/329 (18%), Positives = 100/329 (30%), Gaps = 36/329 (10%)

Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 250
           P P  K  L+        +   P   V  S   D  I VWD       R  +GHTD    
Sbjct: 5   PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

Query: 251 IDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 310
           I     G  L +   D T++ WD +                          D+ + SV +
Sbjct: 65  ISFDHSGKLLASCSADMTIKLWDFQGFECIRT---------------MHGHDHNVSSVSI 109

Query: 311 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS 370
           +P+G  ++       + +W++   T       T        +  + D      +S     
Sbjct: 110 MPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGT--LIASCSNDQ 165

Query: 371 CVKVWDISQPGSKTPV---------------SQLDCLQRDNYIRSVKLLPDGRTLIVGGE 415
            V+VW ++    K  +               S    +       + K    G  L+ G  
Sbjct: 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 225

Query: 416 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 475
              + +WD    T      L         +      K   SC  D  + VWD  N+  ++
Sbjct: 226 DKTIKMWD--VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 283

Query: 476 QFQGHTDGASCIDISADGTKLWTGGLDNT 504
               H    + +D       + TG +D T
Sbjct: 284 TLNAHEHFVTSLDFHKTAPYVVTGSVDQT 312

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.0 bits (224), Expect = 8e-21
 Identities = 59/370 (15%), Positives = 115/370 (31%), Gaps = 58/370 (15%)

Query: 100 IPRHARQINTLS-HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQ 157
           IPR   +   LS H   V  V        + +  +   +KVWD     +      L    
Sbjct: 4   IPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE---TGDFERTLKG-- 57

Query: 158 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV 217
             + ++ +     G+ L        + +WD           +        +++I P+   
Sbjct: 58  HTDSVQDISFDHSGKLLASCSADMTIKLWD--FQGFECIRTMHGHDHNVSSVSIMPNGDH 115

Query: 218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG 277
             S   D  I +W++     V+ F GH +    +  + DGT + +   D TVR W +   
Sbjct: 116 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-- 173

Query: 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR 337
                        T   + +  +  + +  +   P+     +     + +          
Sbjct: 174 -------------TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS------- 213

Query: 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397
                                  PF  S      +K+WD+S   +   +  L     DN+
Sbjct: 214 -------------------GKPGPFLLSGSRDKTIKMWDVS---TGMCLMTLVG--HDNW 249

Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 457
           +R V     G+ ++   +   L +WD      R    L +      +L     +    + 
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDY--KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 307

Query: 458 CSDGNIAVWD 467
             D  + VW+
Sbjct: 308 SVDQTVKVWE 317

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  106 bits (264), Expect = 1e-25
 Identities = 78/421 (18%), Positives = 132/421 (31%), Gaps = 73/421 (17%)

Query: 72  KPAYSYHVTTDGQMQPVPFPPD-----ALIGPGIPRHAR--QINTLSHGEVVCAVTISNP 124
           KP   + +  D Q  P            L  P +PR        +L H  VVC V  SN 
Sbjct: 14  KPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSND 73

Query: 125 TKYVYTGGKGCVKVWDISQP-------------GSKTPVSQLDCLQRDNYIRSVKLLPDG 171
            +Y+ TG     +V+ +S                    ++       D YIRSV   PDG
Sbjct: 74  GEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 133

Query: 172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 231
           + L  G E  +  I        +I   L       Y+L   P      S   D  + +WD
Sbjct: 134 KFLATGAE--DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191

Query: 232 LHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT 291
           L                +      DG  +  G LD  VR WD   G +     S+  S T
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251

Query: 292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 351
                      + + SV    DG++++ G    ++ +W+L +   +              
Sbjct: 252 GHK--------DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK-------------- 289

Query: 352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411
                        S          +++             +   +++ SV    +   ++
Sbjct: 290 -------------SDSKTPNSGTCEVT------------YIGHKDFVLSVATTQNDEYIL 324

Query: 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYA----LAISPDSKVCFSCCSDGNIAVWD 467
            G +   +  WD  S  P +  +   ++    A     ++ P+  V  +   D    +W 
Sbjct: 325 SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

Query: 468 L 468
            
Sbjct: 385 Y 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.9 bits (190), Expect = 4e-16
 Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 19/221 (8%)

Query: 75  YSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGK- 133
           YS      G           +    +      +       V          KY+  G   
Sbjct: 167 YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD 226

Query: 134 GCVKVWDISQPGSKTPVSQLDCLQR--DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP 191
             V+VWD         +   +       + + SV    DG++++ G    ++ +W+L + 
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286

Query: 192 TPRIKAELTSSAPAC----------YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 241
             +  ++  +S               ++A + + +   S   D  +  WD  +   +   
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346

Query: 242 QGHTDGASCIDI------SADGTKLWTGGLDNTVRSWDLRE 276
           QGH +    + +        +     TG  D   R W  ++
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 95.2 bits (235), Expect = 4e-22
 Identities = 34/316 (10%), Positives = 68/316 (21%), Gaps = 23/316 (7%)

Query: 209 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLW-TGGLD 266
            A+    +         N+ V D+ + T+ +        G     ++ D    +      
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 267 NTVRSWDLREGCVK---VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 323
             +   DL                     +           + +              + 
Sbjct: 62  GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121

Query: 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV--------- 374
             L ++  A                 Y +  + D          YK  VK          
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181

Query: 375 ------WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428
                    +         Q    +        +   D +              DL +  
Sbjct: 182 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241

Query: 429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 488
              +     +      L    D    +       +A +DL  + L++          C+ 
Sbjct: 242 THTQEFADLTELYFTGLRSPKDPNQIY--GVLNRLAKYDLKQRKLIKAA-NLDHTYYCVA 298

Query: 489 ISADGTKLWTGGLDNT 504
               G KL+ GG  N 
Sbjct: 299 FDKKGDKLYLGGTFND 314

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 88.3 bits (217), Expect = 8e-20
 Identities = 37/339 (10%), Positives = 86/339 (25%), Gaps = 39/339 (11%)

Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNI 227
                +IV    +NL + D+AS T   K+ +           ++PD++  +   +  G+I
Sbjct: 6   AGHEYMIVTNYPNNLHVVDVASDTV-YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI 64

Query: 228 AVWDLHNQTLVRQFQ------GHTDGASCIDISADGTKLWTGGLDNTVRSWDLR--EGCV 279
              DL                          IS DG +++         +         +
Sbjct: 65  YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 124

Query: 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS------ 333
           +V+  +          +        +  ++   DG   + G +   + +           
Sbjct: 125 EVFSTA---DGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181

Query: 334 ------------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG 381
                              +      +               ++          D+    
Sbjct: 182 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241

Query: 382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA 441
                   +         +    P     I G   + L+ +DL        A L  +   
Sbjct: 242 ----THTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTY-- 294

Query: 442 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 480
            Y +A        +   +  ++AV++      V+  +  
Sbjct: 295 -YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 77.5 bits (189), Expect = 3e-16
 Identities = 41/335 (12%), Positives = 91/335 (27%), Gaps = 41/335 (12%)

Query: 119 VTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 177
             +    +Y+        + V D++   S T       +       +  + PD RT  V 
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVA---SDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVL 57

Query: 178 GEASN-LSIWDLASPTPRIKAELTSS----APACYALAISPDSKVCFSCCSDGN------ 226
                 +   DL +      A L+S       + Y+ AISPD K  ++  +         
Sbjct: 58  NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117

Query: 227 ------IAVWDLHNQTLVRQFQGHT--DGASCIDISADGTKLWTGGLDNTVRSWDLRE-- 276
                 + V+   +    +  +          +  + DG+    G     +     +   
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTV 177

Query: 277 -----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL 331
                   +    +         Q    +        +   D +              DL
Sbjct: 178 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 237

Query: 332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC 391
            +     +     +      L    D    +   +     +  +D+ Q         +  
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR----LAKYDLKQR------KLIKA 287

Query: 392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 426
              D+    V     G  L +GG  ++L++++  +
Sbjct: 288 ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 62.4 bits (150), Expect = 3e-11
 Identities = 24/201 (11%), Positives = 47/201 (23%), Gaps = 24/201 (11%)

Query: 101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDN 160
            +  +    L           +    Y +       +   +                   
Sbjct: 170 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD----------- 218

Query: 161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
                    D +              DL +     +     +      L    D    + 
Sbjct: 219 ---------DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY- 268

Query: 221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
                 +A +DL  + L++          C+     G KL+ GG  N +  ++      K
Sbjct: 269 -GVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL-EK 325

Query: 281 VWDISQPGSKTPVSQLDCLQR 301
           V +I  PG     +      R
Sbjct: 326 VKNIKLPGGDMSTTTPQVFIR 346

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 86.4 bits (212), Expect = 4e-19
 Identities = 48/349 (13%), Positives = 102/349 (29%), Gaps = 38/349 (10%)

Query: 126 KYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-L 183
            Y+    +   + V D            +             + P GR        S  L
Sbjct: 2   DYILAPARPDKLVVIDTE---KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESL 58

Query: 184 SIWDLASPTPRIKAELTS---SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--- 237
              DL +     + +L++      + +  A+SPD K      S   + +     Q     
Sbjct: 59  VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118

Query: 238 --------VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW--DLREGCVKVWDISQP 287
                    R+        + +  + DG+KL+  G D  V             +      
Sbjct: 119 LYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE 178

Query: 288 GSKTPVSQLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT 343
               P                        D          + L   DL +    ++  + 
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE-VR 237

Query: 344 SSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL 403
                 ++ A++P     F + +     ++ +D+ +       + +  +   +   SV +
Sbjct: 238 IMDVFYFSTAVNPAKTRAFGAYN----VLESFDLEKN------ASIKRVPLPHSYYSVNV 287

Query: 404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA--LAISPD 450
             DG T+ +GG   +L+ +D  +   + + +L  +A    A     + D
Sbjct: 288 STDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 84.9 bits (208), Expect = 1e-18
 Identities = 33/331 (9%), Positives = 81/331 (24%), Gaps = 24/331 (7%)

Query: 174 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDL 232
           ++       L + D           +  + P      ++P  +    +     ++   DL
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 233 HNQTLVRQFQGHT-----DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQP 287
                + +    T            +S DG  L        +          +V      
Sbjct: 64  VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123

Query: 288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 347
                  +    +    I  +    DG  L   G   ++   +  +       +   +  
Sbjct: 124 TLS----RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET 179

Query: 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQ-RDNYIRSVKLLPD 406
                 ++  ++                DI         + L  +      +   ++   
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239

Query: 407 GRT----------LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 456
                            G  + L  +DL       +  L  S    Y++ +S D    + 
Sbjct: 240 DVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSY---YSVNVSTDGSTVWL 296

Query: 457 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 487
             + G++A +D        Q     + +  +
Sbjct: 297 GGALGDLAAYDAETLEKKGQVDLPGNASMSL 327

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 81.8 bits (200), Expect = 1e-17
 Identities = 31/301 (10%), Positives = 75/301 (24%), Gaps = 20/301 (6%)

Query: 220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGAS--CIDISADGTKLW-TGGLDNTVRSWDLRE 276
           +      + V D     + +       G +     ++  G   + T     ++   DL  
Sbjct: 6   APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65

Query: 277 GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI--VGGEASNLSIWDLASP 334
           G            +   S        +           R  +     + + ++++D  + 
Sbjct: 66  GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125

Query: 335 TPRIKAE-------LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS 387
           + R   E       L  +        +  D       +        +          P  
Sbjct: 126 SRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDV 185

Query: 388 QLDCL----QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY 443
                                 D          + L   DL +    ++  +       +
Sbjct: 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE-VRIMDVFYF 244

Query: 444 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN 503
           + A++P     F       +  +DL     +++          +++S DG+ +W GG   
Sbjct: 245 STAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALG 301

Query: 504 T 504
            
Sbjct: 302 D 302

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 17/163 (10%), Positives = 43/163 (26%), Gaps = 9/163 (5%)

Query: 89  PFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT 148
            +  +    P +     Q  +             +      T  +  +   D+       
Sbjct: 174 SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233

Query: 149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 208
              ++  +             +       G  + L  +DL       +  L  S    Y+
Sbjct: 234 REVRIMDVFY------FSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSY---YS 284

Query: 209 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 251
           + +S D    +   + G++A +D        Q     + +  +
Sbjct: 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 82.3 bits (201), Expect = 6e-18
 Identities = 29/299 (9%), Positives = 67/299 (22%), Gaps = 16/299 (5%)

Query: 207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD 266
             L  +P       C +  ++    + + T    +  H+   +    S  G    +G + 
Sbjct: 21  VVLGNTPAGDKIQYC-NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 267 NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL 326
             VR WD  +    +       S          +        +       + +    ++ 
Sbjct: 80  GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139

Query: 327 SIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV 386
                 +          S      + +              +KS            +   
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199

Query: 387 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA 446
                         V                N               +  + + + + L 
Sbjct: 200 DGSLFASTGGDGTIVL--------------YNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 245

Query: 447 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTKLWTGGLDNT 504
            SPD     S  +D  I +W++    + +     T      + I      L +   +  
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 304

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.3 bits (144), Expect = 1e-10
 Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 20/302 (6%)

Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228
           P G  +      +++    + S T       T  +        SP    C S    GN+ 
Sbjct: 27  PAGDKIQYCN-GTSVYTVPVGSLTDT--EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR 83

Query: 229 VWDLHNQ--TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQ 286
           +WD       L       +     I   ++  ++   G                      
Sbjct: 84  IWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 143

Query: 287 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA 346
             ++   S      R   I S                 + ++     P  + K+      
Sbjct: 144 GQARAMNSVDFKPSRPFRIISGS--------------DDNTVAIFEGPPFKFKSTFGEHT 189

Query: 347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 406
              +++  +PD      +       +                L  +     +  +   PD
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249

Query: 407 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 466
           G  +        + IW++A+     K     +      L I    +   S  ++G I   
Sbjct: 250 GTKIASASADKTIKIWNVATLKV-EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

Query: 467 DL 468
           + 
Sbjct: 309 NP 310

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.8 bits (200), Expect = 1e-17
 Identities = 37/314 (11%), Positives = 82/314 (26%), Gaps = 29/314 (9%)

Query: 207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTL---VRQFQGHTDGASCIDISADGTKLWTG 263
             + I P   +      DG++ V+    Q     + Q   +     C +   +       
Sbjct: 15  SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74

Query: 264 GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 323
           G            G      ++   +   + ++     D  I +                
Sbjct: 75  GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI------- 127

Query: 324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK 383
                             L S+         + D+ S         S V+ + +      
Sbjct: 128 ----DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL-PLCED 182

Query: 384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP-------------R 430
              +  +   +        L  +            +++                     R
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242

Query: 431 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 490
           +  + T+ A    ++  SP  K  ++  SDG I+ W+L  +  ++ F    +  S + I+
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIA 301

Query: 491 ADGTKLWTGGLDNT 504
                L     D+T
Sbjct: 302 CSDNILCLATSDDT 315

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.3 bits (152), Expect = 2e-11
 Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 15/164 (9%)

Query: 123 NPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 182
           N ++ +       V+ + +         +  +   +        L  +            
Sbjct: 159 NSSRLIVGMNNSQVQWFRL-PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217

Query: 183 LSIWDLASPTP-------------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 229
           +++                     R+  + T+ A    ++  SP  K  ++  SDG I+ 
Sbjct: 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISC 277

Query: 230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
           W+L  +  ++ F    +  S + I+     L     D+T ++  
Sbjct: 278 WNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA 320

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.6 bits (150), Expect = 3e-11
 Identities = 31/331 (9%), Positives = 79/331 (23%), Gaps = 29/331 (8%)

Query: 112 HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
             + +  + I      +      G + V+          + Q   L+  + +     + +
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS--LRYKHPLLCCNFIDN 67

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
               I  G      +      +P  +A   + A                +   DG I V 
Sbjct: 68  TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127

Query: 231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK 290
           D  N         + +  +    +   T         +     +    V+ + +      
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS----SRLIVGMNNSQVQWFRL-PLCED 182

Query: 291 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-------------PR 337
              +  +   +        L  +            +++                     R
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242

Query: 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397
           +  + T+ A    ++  SP     F  +      +  W++    ++  +       + N 
Sbjct: 243 LNLKDTNLAYPVNSIEFSPR--HKFLYTAGSDGIISCWNLQ---TRKKIKN---FAKFNE 294

Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428
              VK+      L +               T
Sbjct: 295 DSVVKIACSDNILCLATSDDTFKTNAAIDQT 325

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.2 bits (144), Expect = 1e-10
 Identities = 37/285 (12%), Positives = 69/285 (24%), Gaps = 30/285 (10%)

Query: 237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQL 296
           +V+  Q   D  S I I    + L     D ++  +        V  +     K P+   
Sbjct: 3   IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPL--- 59

Query: 297 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP 356
                         + +    I  G      I  +          LT++        I  
Sbjct: 60  ---------LCCNFIDNTDLQIYVG-TVQGEILKVDLIGSPSFQALTNNEANLGICRICK 109

Query: 357 DSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA 416
                  ++        +   +       V  L+        +   +  +   LIVG   
Sbjct: 110 YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNN 169

Query: 417 SNLSIWDLASPTPRIKAELTSSAPAC--YALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 474
           S +  + L            S           +  + +       DG +AV    +Q   
Sbjct: 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229

Query: 475 ---------------RQFQGHTDGASCIDISADGTKLWTGGLDNT 504
                           +        + I+ S     L+T G D  
Sbjct: 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 78.8 bits (192), Expect = 1e-16
 Identities = 40/350 (11%), Positives = 84/350 (24%), Gaps = 29/350 (8%)

Query: 126 KYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN--L 183
             +    +G   + D+S        + +  +     IR V+   D +   + G      L
Sbjct: 16  DLIAFVSRGQAFIQDVSG-------TYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFL 68

Query: 184 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 243
            I+D  +           +    +A+ +  + K          I   DL         + 
Sbjct: 69  GIYDYRTGKAEKF---EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125

Query: 244 HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDN 303
                +   IS +   +  G       +       + V+D+                 ++
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF------AATTENS 179

Query: 304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-----LTSSAPACYALAISPDS 358
           +  +     D + L      S     D        +       +     +     + P S
Sbjct: 180 HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRS 239

Query: 359 KSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 418
            +     +      K               +                         E   
Sbjct: 240 MTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV 299

Query: 419 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468
           L  +D+ +       ++T        L +S D K       DG I  + L
Sbjct: 300 LLKYDVKTR------KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 66.8 bits (161), Expect = 1e-12
 Identities = 35/343 (10%), Positives = 80/343 (23%), Gaps = 46/343 (13%)

Query: 202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW 261
           S P+ +A   SP      +  S G   + D+    +++           +    D    +
Sbjct: 1   SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAF 58

Query: 262 TGGLD--NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL--------- 310
             G    + +  +D R G  + ++ +           +           ++         
Sbjct: 59  IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 118

Query: 311 ----LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH 366
                     +I     S+ S +       +          A +   +         + +
Sbjct: 119 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN 178

Query: 367 HYKSC------------------VKVWDISQPGSKTPVSQLDCL--QRDNYIRSVKLLPD 406
            +                         D         V     +           KL+P 
Sbjct: 179 SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 238

Query: 407 GRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 461
             T   G           S  ++     R+   L SS            +         G
Sbjct: 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKG 298

Query: 462 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
            +  +D+  + +        +  + + +SAD   +     D  
Sbjct: 299 VLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGK 337

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 63.3 bits (152), Expect = 2e-11
 Identities = 21/185 (11%), Positives = 46/185 (24%), Gaps = 11/185 (5%)

Query: 100 IPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCL--Q 157
           +        T  +         ++     Y   +      D         V     +   
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225

Query: 158 RDNYIRSVKLLPDGRTLIVG-----GEASNLSIWDLASPTPRIKAELTSSAPACYALAIS 212
                   KL+P   T   G           S  ++     R+   L SS          
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285

Query: 213 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSW 272
             +         G +  +D+  + +        +  + + +SAD   +     D  + ++
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341

Query: 273 DLREG 277
            L + 
Sbjct: 342 PLEKP 346

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 59.1 bits (141), Expect = 4e-10
 Identities = 33/330 (10%), Positives = 82/330 (24%), Gaps = 26/330 (7%)

Query: 106 QINTLSHGEVVCAVTISNPTKYVYTGG---KGCVKVWDIS--QPGSKTPVSQLDCLQRDN 160
            +  +     +  V     TK  +  G      + ++D    +                +
Sbjct: 35  YVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVD 94

Query: 161 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS 220
                 ++ + R  I+  +        +      +  + T S  + +     P       
Sbjct: 95  RNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 154

Query: 221 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVK 280
                 I V+D+  +  +                AD   L+     +   S D       
Sbjct: 155 GYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFS 213

Query: 281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG---EASNLSIWDLASPTPR 337
              +S+P     +               KL+P   T   G             +      
Sbjct: 214 FEVVSKPFVIPLIP--------GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD 265

Query: 338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397
            +  +   +             + ++     K  +  +D+         +          
Sbjct: 266 YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNN--------- 316

Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASP 427
           +  ++L  D +T++V  +   +  + L  P
Sbjct: 317 LTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (189), Expect = 3e-16
 Identities = 43/321 (13%), Positives = 84/321 (26%), Gaps = 40/321 (12%)

Query: 210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV 269
            +        S   D  + VW       +R   GHT G     +  +     +      V
Sbjct: 22  CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81

Query: 270 RSWDLREGCVKV---------------------WDISQPGSKTPVSQLDCLQRDNYIRSV 308
            + +  E    +                      D +         Q   +   +     
Sbjct: 82  WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141

Query: 309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY 368
            +  DGR ++ G     + +WD  + T       T         ++  D       S   
Sbjct: 142 CVQYDGRRVVSGAYDFMVKVWDPETETCLH----TLQGHTNRVYSLQFDGI--HVVSGSL 195

Query: 369 KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT 428
            + ++VWD+                  +   +  +      L+ G   S + IWD+ +  
Sbjct: 196 DTSIRVWDVETG-------NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248

Query: 429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-----GHTDG 483
                +  +   +     +  +     +   DG + +WDL     +R        G    
Sbjct: 249 CLQTLQGPNKHQSAVT-CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307

Query: 484 ASCIDISADGTKLWTGGLDNT 504
              I  S        G  + T
Sbjct: 308 VWRIRASNTKLVCAVGSRNGT 328

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (155), Expect = 6e-12
 Identities = 41/293 (13%), Positives = 79/293 (26%), Gaps = 30/293 (10%)

Query: 230 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-----------C 278
           W        +  +GH D      +   G ++ +G  DNT++ W    G            
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 279 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 338
           V    +      +  +       +           G T  V     +       S    +
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 339 KAELTSSAPACYALAISPDSKSPFFSSHHYKSC------VKVWDISQPGSKTPVSQLDCL 392
           +     +    + L     +                   VKVWD       T +  L   
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE---TCLHTLQGH 176

Query: 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 452
               Y        DG  ++ G   +++ +WD+           T +        +     
Sbjct: 177 TNRVYSLQ----FDGIHVVSGSLDTSIRVWDV----ETGNCIHTLTGHQSLTSGMELKDN 228

Query: 453 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISADGTKLWTGGLDNT 504
           +  S  +D  + +WD+     ++  QG     S    +  +   + T   D T
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT 281

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (149), Expect = 3e-11
 Identities = 48/347 (13%), Positives = 89/347 (25%), Gaps = 58/347 (16%)

Query: 112 HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQ-------PGSKTPVSQLD--------- 154
              V+  +        + +G     +KVW            G    V             
Sbjct: 16  DDHVITCLQFCG--NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISG 73

Query: 155 -----CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL 209
                    +           G T  V     +       S    ++     +    + L
Sbjct: 74  STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 133

Query: 210 AISPDSKVCFSCC--------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW 261
                +  C             D  + VWD   +T +   QGHT+      +  DG  + 
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVV 191

Query: 262 TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 321
           +G LD ++R WD+  G             + +                       L+ G 
Sbjct: 192 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-----------------LKDNILVSGN 234

Query: 322 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPG 381
             S + IWD+ +       +  +   +             F  +      VK+WD+    
Sbjct: 235 ADSTVKIWDIKTGQCLQTLQGPNKHQSAV---TCLQFNKNFVITSSDDGTVKLWDLKTGE 291

Query: 382 SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----EASNLSIWDL 424
               +  L+       +  ++         VG     E + L + D 
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.2 bits (188), Expect = 5e-16
 Identities = 41/361 (11%), Positives = 92/361 (25%), Gaps = 36/361 (9%)

Query: 162 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 221
           I       D   + +      + I++ +        EL         +  +PDS    +C
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

Query: 222 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKV 281
            +D N  VW L  +T            +                +    +       + +
Sbjct: 70  GTDRNAYVWTLKGRTWKPTLVILRINRAARC--------VRWAPNEKKFAVGSGSRVISI 121

Query: 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS-------- 333
               Q  +   V +       + + S+   P+   L  G       I+            
Sbjct: 122 CYFEQE-NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 180

Query: 334 ------PTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS 387
                   P  +    SS+   +   +   +     +   + S V + D  +  +     
Sbjct: 181 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT-- 238

Query: 388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 447
                     + +V  + +   L+  G      ++   S   ++        P     + 
Sbjct: 239 ---LASETLPLLAVTFITESS-LVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPK--QSSQ 292

Query: 448 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG----TKLWTGGLDN 503
              +        D   +               H +  S I + + G    ++  T G+D 
Sbjct: 293 RGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDG 351

Query: 504 T 504
            
Sbjct: 352 G 352

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.7 bits (171), Expect = 8e-14
 Identities = 43/381 (11%), Positives = 103/381 (27%), Gaps = 38/381 (9%)

Query: 116 VCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL 174
           +     +     +        V +++ S       V +L   + +  +  V   PD   +
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKS-GNKWVQVHELK--EHNGQVTGVDWAPDSNRI 66

Query: 175 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 234
           +  G   N  +W L   T +    +     A   +  +P+ K          I++     
Sbjct: 67  VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 126

Query: 235 QT----LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDIS---QP 287
           +          +        +D   +   L  G  D   R +      V+          
Sbjct: 127 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 186

Query: 288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 347
                    +      ++  V    +G  +      S + + D             +   
Sbjct: 187 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL-- 244

Query: 348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL---- 403
              A+    +S     + H     +  +D +  G  +   +LD  ++ +           
Sbjct: 245 PLLAVTFITESSL-VAAGHDCFPVLFTYDSAA-GKLSFGGRLDVPKQSSQRGLTARERFQ 302

Query: 404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF----SCCS 459
             D +    G  A+   +  L   +                +++    K       +   
Sbjct: 303 NLDKKASSEGSAAAGAGLDSLHKNS-------------VSQISVLSGGKAKCSQFCTTGM 349

Query: 460 DGNIAVWDLHNQTLVRQFQGH 480
           DG +++WD+  ++L    +  
Sbjct: 350 DGGMSIWDV--RSLESALKDL 368

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.1 bits (141), Expect = 4e-10
 Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 32/279 (11%)

Query: 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR 301
               +  SC   + D T++     ++ V  ++                   V +L   + 
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEK-----------SGNKWVQVHELK--EH 50

Query: 302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSP 361
           +  +  V   PD   ++  G   N  +W L   T +    +     A   +  +P+ K  
Sbjct: 51  NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKF 110

Query: 362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI 421
              S      + +    Q  +   V +       + + S+   P+   L  G       I
Sbjct: 111 AVGSGSR--VISICYFEQE-NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 167

Query: 422 WDLAS----------------PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 465
           +                    P   +  E +SS    + +  S +         D  + +
Sbjct: 168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 227

Query: 466 WDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
            D   +  V      T     +    + + +  G     
Sbjct: 228 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFP 266

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.9 bits (182), Expect = 4e-15
 Identities = 44/347 (12%), Positives = 100/347 (28%), Gaps = 59/347 (17%)

Query: 209 LAISPDSKVCFSCCSDGNIAVWDL------HNQTLVRQFQGHTDGASCIDI-------SA 255
            ++S  +    SC  DG + VWD       + +        H  G   +D+       + 
Sbjct: 18  FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 77

Query: 256 DGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG- 314
           +   + T      +  + +        D ++      +  LD   + +   ++K      
Sbjct: 78  ELCLVATTSFSGDLLFYRITRE-----DETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132

Query: 315 ----RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC----------------YALAI 354
                 L+         IW          +   + +P                   ++ I
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192

Query: 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414
           S        +  +  +       +        SQ   +   N IRSVK  P G  L +  
Sbjct: 193 SERGL--IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250

Query: 415 EASN--------------LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 460
           ++++              +    + + + +      + +    +L+ +   +   S   D
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310

Query: 461 GNIAVWDLHNQTLVRQFQGHTDG----ASCIDISADGTKLWTGGLDN 503
           G +  WD+  +  +     H D        + +   G  L   G+ +
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 3e-06
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 20/196 (10%)

Query: 97  GPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLD-C 155
            P +       + ++  +   +V IS           G V++ ++S              
Sbjct: 168 SPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSM 227

Query: 156 LQRDNYIRSVKLLPDGRTLIVGGEASN--------------LSIWDLASPTPRIKAELTS 201
           +   N IRSVK  P G  L +  ++++              +    + + + +      +
Sbjct: 228 INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 287

Query: 202 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISADG 257
            +    +L+ +   +   S   DG +  WD+  +  +     H D        + +   G
Sbjct: 288 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 347

Query: 258 TKLWTGGLDNTVRSWD 273
             L   G+ + V+   
Sbjct: 348 DSLAEPGVFD-VKFLK 362

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (165), Expect = 3e-13
 Identities = 51/304 (16%), Positives = 92/304 (30%), Gaps = 44/304 (14%)

Query: 210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV 269
            +  D +   S   D  I +WD +     R   GHT    C+                  
Sbjct: 20  CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ----------------- 62

Query: 270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 329
             +D R       D +         ++      +    + L  +   ++   +  ++++W
Sbjct: 63  --YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 120

Query: 330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL 389
           D+ASPT      +     A        D    +  S      +KVW+ S   +   V  L
Sbjct: 121 DMASPTDITLRRVLVGHRAAV---NVVDFDDKYIVSASGDRTIKVWNTS---TCEFVRTL 174

Query: 390 DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISP 449
           +  +R             R ++ G   + + +WD+                      I  
Sbjct: 175 NGHKRGIACLQ----YRDRLVVSGSSDNTIRLWDIECGACLR----VLEGHEELVRCIRF 226

Query: 450 DSKVCFSCCSDGNIAVWDL---------HNQTLVRQFQGHTDGASCIDISADGTKLWTGG 500
           D+K   S   DG I VWDL              +R    H+     +    D  ++ +  
Sbjct: 227 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 284

Query: 501 LDNT 504
            D+T
Sbjct: 285 HDDT 288

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (132), Expect = 4e-09
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 22/152 (14%)

Query: 131 GGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS 190
            G   +KVW+ S   +   V  L+  +R             R ++ G   + + +WD+  
Sbjct: 155 SGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIRLWDIEC 207

Query: 191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL---------HNQTLVRQF 241
                               I  D+K   S   DG I VWDL              +R  
Sbjct: 208 GACLR----VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 263

Query: 242 QGHTDGASCIDISADGTKLWTGGLDNTVRSWD 273
             H+     +    D  ++ +   D+T+  WD
Sbjct: 264 VEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 2e-07
 Identities = 43/273 (15%), Positives = 83/273 (30%), Gaps = 37/273 (13%)

Query: 233 HNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKT 291
           H+   +      + G  C+    D  K+ +G  DNT++ WD     C ++      G   
Sbjct: 3   HSLQRIHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTLECKRILT----GHTG 56

Query: 292 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 351
            V  L   +R     S         +  G   + L     A    R              
Sbjct: 57  SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN------------ 104

Query: 352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 411
                   +    +      + VWD++ P   T    L   +    +       D + ++
Sbjct: 105 --------NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD----FDDKYIV 152

Query: 412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471
                  + +W+ ++         T +        +    ++  S  SD  I +WD+   
Sbjct: 153 SASGDRTIKVWNTSTCEFVR----TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 208

Query: 472 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
             +R  +GH +      I  D  ++ +G  D  
Sbjct: 209 ACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGK 239

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 68.7 bits (166), Expect = 3e-13
 Identities = 36/323 (11%), Positives = 78/323 (24%), Gaps = 30/323 (9%)

Query: 208 ALAISPDSKVCF-----SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT 262
             A +PD++  +        +     V D     ++    G         ++ DG+ +  
Sbjct: 6   LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN--PVVADDGSFIAH 63

Query: 263 GGLDNTVRSWDLREGCVKVWDIS--QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 320
                +  +   R   V+V+D     P +   +          Y     L PDG+TL+  
Sbjct: 64  ASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFY 123

Query: 321 GEASNLSIWDLASPTPRIKAELTSSAPA-------CYALAISPDSKSPFFSSHHYKSCVK 373
             +   ++  +       K  L                     D       +   +   +
Sbjct: 124 QFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS-LAKVAFGTEGTPE 182

Query: 374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 433
           +        +               R V     G+   +   + +             + 
Sbjct: 183 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242

Query: 434 ELTSSAPACYALAISPDSKVCFSCCSDGN----------IAVWDLHNQTLVRQFQGHTDG 483
                      +A        +      +          + V D      + +F+     
Sbjct: 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HE 301

Query: 484 ASCIDISADGTKLW--TGGLDNT 504
              I++S D   L       D T
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKT 324

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 50.9 bits (120), Expect = 2e-07
 Identities = 34/276 (12%), Positives = 74/276 (26%), Gaps = 21/276 (7%)

Query: 118 AVTISNPTKYVYTGGKGCVKVWDIS--QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI 175
           A   +  ++         V+V+D     P +   +          Y     L PDG+TL+
Sbjct: 62  AHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 121

Query: 176 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 235
               +   ++  +       K  L       +    +PD+        DG++A      +
Sbjct: 122 FYQFSPAPAVGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFMHC--RDGSLAKVAFGTE 178

Query: 236 TLVRQFQGHTDGASCIDI------SADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGS 289
                            +      S    +L        +   DL  G  K     +  +
Sbjct: 179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 238

Query: 290 KTPVSQLDCLQRDNYI-------RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342
           +   +          +       R   L+           +  + + D  +     K E+
Sbjct: 239 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 298

Query: 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378
                   ++ +S D K   ++       + + D  
Sbjct: 299 GHEI---DSINVSQDEKPLLYALSTGDKTLYIHDAE 331

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 68.1 bits (164), Expect = 3e-13
 Identities = 32/289 (11%), Positives = 78/289 (26%), Gaps = 20/289 (6%)

Query: 236 TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVS 294
           ++ +   GH    + +  SADG  L++   +  + SWD+  G   +V+        T + 
Sbjct: 3   SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62

Query: 295 -----QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSS---- 345
                 L  +  D++++ V     G            S     + +      + +     
Sbjct: 63  TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122

Query: 346 --------APACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNY 397
                        +   S  + S                + +    +       +     
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182

Query: 398 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC 457
                       +        +      +         T        ++ SPD+    + 
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG 242

Query: 458 CSDGNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGLDNT 504
             D ++ VW+++  +         H   +    I  + T + + G D+ 
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 291

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 65.8 bits (158), Expect = 2e-12
 Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 22/283 (7%)

Query: 207 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISADGTKLWTGGL 265
            AL+ S D K  FS  ++G+I  WD+      R F   H    + I  +     L+T   
Sbjct: 16  TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT-SKGDLFTVSW 74

Query: 266 DNTVRSWDLREGCVKVWDIS-------------QPGSKTPVSQLDCLQRDNYIRSVKLLP 312
           D+ ++        V                          V+             +  +P
Sbjct: 75  DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP 134

Query: 313 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV 372
                     +++     +     ++     S A       I   ++    +  +  + +
Sbjct: 135 ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFL 194

Query: 373 KVWD-------ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA 425
              D        S   +               +  V   PD   L  G   +++ +W++ 
Sbjct: 195 VATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 254

Query: 426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 468
            P+        + A +     I  +     S   D NI  W++
Sbjct: 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 6e-05
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 228
           PD   L  G   +++ +W++  P+        + A +     I  +     S   D NI 
Sbjct: 234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293

Query: 229 VWDL 232
            W++
Sbjct: 294 FWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 36/294 (12%), Positives = 76/294 (25%), Gaps = 33/294 (11%)

Query: 112 HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
           H + + A++ S   K +++    G +  WDIS   S               I  +K    
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD----VHATMITGIKTTSK 66

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 230
           G    V  +     +    S     KA     +     LA+S D  +  + C        
Sbjct: 67  GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126

Query: 231 DLHNQTLVRQFQG-------------------------HTDGASCIDISADGTKLWTGGL 265
                 +   +                            +  +     +       T   
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186

Query: 266 DNTVRSWDLREGCVKVWDISQPG-SKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS 324
            +   ++ +     +         +               +  V   PD   L  G   +
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 246

Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378
           ++ +W++  P+        + A +     I  +       S    S +K W++ 
Sbjct: 247 SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET--TIVSAGQDSNIKFWNVP 298

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.6 bits (163), Expect = 6e-13
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 20/366 (5%)

Query: 106 QINTLS--HGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGSKTPVSQLDCLQRDNYI 162
           Q  TL      V+  +   +   YV TG     ++V+D     +K  + QL     D  +
Sbjct: 4   QRTTLRGHMTSVITCLQFED--NYVITGADDKMIRVYDSI---NKKFLLQLSG--HDGGV 56

Query: 163 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC 222
            ++K    G  L+ G     + +WD+         E  +S   C  +    + K   +  
Sbjct: 57  WALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS 115

Query: 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVW 282
            D  + VW L  ++ V    G       +  + +    + G L   + S     G   + 
Sbjct: 116 RDNTLHVWKLPKESSVPDH-GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 174

Query: 283 DISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL 342
                 +   V  +  ++    +                +    +  D       I+   
Sbjct: 175 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWD 229

Query: 343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK 402
             +    Y L            S  +          +       S+       N + ++ 
Sbjct: 230 LENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTN-LSAIT 288

Query: 403 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 462
                  ++V G  +  +I++L S    + A +   A   +++     + V  +   DG 
Sbjct: 289 TFYVSDNILVSGSENQFNIYNLRSGKL-VHANILKDADQIWSVNFKGKTLVA-AVEKDGQ 346

Query: 463 IAVWDL 468
             +  L
Sbjct: 347 SFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.8 bits (153), Expect = 1e-11
 Identities = 38/330 (11%), Positives = 75/330 (22%), Gaps = 36/330 (10%)

Query: 210 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-------KLWT 262
            +  +     +   D  I V+D  N+  + Q  GH  G   +  +  G        +   
Sbjct: 18  CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVR 77

Query: 263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE 322
                      + EG               +  +    RDN +   KL  +      G E
Sbjct: 78  VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 137

Query: 323 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFS------------SHHYKS 370
                ++      P     L     +   ++   +                      Y  
Sbjct: 138 HDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 197

Query: 371 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA----- 425
                 I          +      D  IR   L        + G  + + +  L+     
Sbjct: 198 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLV 257

Query: 426 ----------SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 475
                             + +       A+     S       S+    +++L +  LV 
Sbjct: 258 SAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 317

Query: 476 Q-FQGHTDGASCIDISADGTKLWTGGLDNT 504
                  D    ++     T +     D  
Sbjct: 318 ANILKDADQIWSVNFKGK-TLVAAVEKDGQ 346

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 11/81 (13%), Positives = 21/81 (25%), Gaps = 10/81 (12%)

Query: 206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISADGTKLWTGG 264
             A+     S       S+    +++L +  LV        D    ++     T +    
Sbjct: 284 LSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVE 342

Query: 265 LDNTVRSWDLREGCVKVWDIS 285
            D              + D S
Sbjct: 343 KDGQSFLE--------ILDFS 355

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.9 bits (161), Expect = 9e-13
 Identities = 44/333 (13%), Positives = 90/333 (27%), Gaps = 23/333 (6%)

Query: 181 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN-IAVWDLHNQTL-- 237
           S++S+ ++  P P      T        L+  P +      C     +   D  +  +  
Sbjct: 1   SSISLKEIIPPQPS-----TQRNFTT-HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPP 54

Query: 238 VRQFQGH-TDGASCIDIS--ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS 294
           V QF GH +   + +  S       L +G     V  W                S+  V 
Sbjct: 55  VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 114

Query: 295 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI 354
                     I  +    +GR L V GE  +     ++  +     E++  +    A  +
Sbjct: 115 A-------GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL 167

Query: 355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG 414
                    +     S V         S +  +          +       +    +   
Sbjct: 168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 227

Query: 415 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 474
              +      +    +   +               DS+   +  +D  I VWD+     V
Sbjct: 228 RKIS-CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV 286

Query: 475 RQFQGHTDGASCIDIS---ADGTKLWTGGLDNT 504
           +++           +        ++ +  LD T
Sbjct: 287 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 319

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (138), Expect = 7e-10
 Identities = 36/310 (11%), Positives = 78/310 (25%), Gaps = 11/310 (3%)

Query: 164 SVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTS-SAPACYALAISP--DSKVCF 219
            +   P    +    G+++ +   D          + T   +     +  SP   S+   
Sbjct: 22  HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC 81

Query: 220 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCV 279
           S    G + VW           + +      +         W           + R+   
Sbjct: 82  SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFG 141

Query: 280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339
                        + ++    +      +K     R++ VG + S +             
Sbjct: 142 VFISWDSG---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD 198

Query: 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR 399
                       +  SPDS     +    +        S    K      + +Q   +  
Sbjct: 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 258

Query: 400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-KVCFSCC 458
           S     D +     G  + + +WD+ +     K  L         + +         S  
Sbjct: 259 SW---LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315

Query: 459 SDGNIAVWDL 468
            DG +  ++L
Sbjct: 316 LDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (100), Expect = 4e-05
 Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 1/123 (0%)

Query: 111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
             G  V  V  S  +           K+        +      D  +            D
Sbjct: 203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLD 262

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAV 229
            +     G  + + +WD+ +     K  L         + +         S   DG +  
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322

Query: 230 WDL 232
           ++L
Sbjct: 323 YEL 325

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.0 bits (156), Expect = 3e-12
 Identities = 29/286 (10%), Positives = 85/286 (29%), Gaps = 22/286 (7%)

Query: 234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG----CVKVWDISQPGS 289
           +  +++   GH  G + + ++     L +G  D  +  W            +  +    +
Sbjct: 2   HDEVLKTISGHNKGITALTVN----PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA 57

Query: 290 KT----------PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK 339
           +            V+ +   +  +  +      DG T ++  +   L +         IK
Sbjct: 58  QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQS--FTGDIIK 115

Query: 340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIR 399
           +   +S  +  +L+ +  +      +      +   ++S        ++   +       
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175

Query: 400 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 459
            +        +++    S        +        ++       A     +  +  +   
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 235

Query: 460 DGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
           D NI ++ +     +++    H DG + +      T L + G D  
Sbjct: 236 DTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC 280

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.2 bits (128), Expect = 1e-08
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 206 CYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGG 264
             A     +  +  +   D NI ++ +     +++    H DG + +      T L + G
Sbjct: 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSG 276

Query: 265 LDNTVRSWD 273
            D  ++ W+
Sbjct: 277 ADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (89), Expect = 7e-04
 Identities = 9/113 (7%), Positives = 29/113 (25%), Gaps = 15/113 (13%)

Query: 218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREG 277
            +   S            + +             +   +   + TG LD  +  + ++  
Sbjct: 188 LYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 247

Query: 278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWD 330
                          +  L+     + + ++        L+  G  + +  W+
Sbjct: 248 ------------MKIIKALNA--HKDGVNNLLWETPST-LVSSGADACIKRWN 285

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 64.8 bits (157), Expect = 7e-12
 Identities = 47/381 (12%), Positives = 95/381 (24%), Gaps = 55/381 (14%)

Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 186
            V     G + + D     +    + LD       +   +L   GR L V G    +++ 
Sbjct: 35  SVTLRDAGQIALID---GSTYEIKTVLDT---GYAVHISRLSASGRYLFVIGRDGKVNMI 88

Query: 187 DLASPTPRIKAEL---TSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQ 242
           DL    P   AE+   + +     +     + K             + D       +   
Sbjct: 89  DLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148

Query: 243 GHTDGASCIDISADG-TKLWTGGLDNTVRSWDLRE-GCVKVWDISQPGSKTPVSQLDCLQ 300
                    +   +                 +++E G + + D +   +         + 
Sbjct: 149 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE----IS 204

Query: 301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA------------ 348
            + ++    L    R  I    A N  +         +  E T                 
Sbjct: 205 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT 264

Query: 349 ---CYALAISPDSKSPFFSSHHYKSCVKVWDISQ----PGSKTPVSQ----------LDC 391
               +A +   D       +         W I       G  +   +             
Sbjct: 265 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT 324

Query: 392 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD- 450
           L  +  I     + D + +   G         +A       A +T   P       + D 
Sbjct: 325 LNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW-----AGITEGQPRVVQGEFNKDG 379

Query: 451 SKVCFSCCS----DGNIAVWD 467
           ++V FS  +    +  + V D
Sbjct: 380 TEVWFSVWNGKDQESALVVVD 400

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.6 bits (115), Expect = 1e-06
 Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 8/104 (7%)

Query: 405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 464
            +    +   +A  +++ D +  T  IK  L  +  A +   +S   +  F    DG + 
Sbjct: 30  LENLFSVTLRDAGQIALIDGS--TYEIKTVL-DTGYAVHISRLSASGRYLFVIGRDGKVN 86

Query: 465 VWDLHNQTL-----VRQFQGHTDGASCIDISADGTKLWTGGLDN 503
           + DL  +       ++         +      +      G    
Sbjct: 87  MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP 130

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 63.7 bits (153), Expect = 1e-11
 Identities = 40/313 (12%), Positives = 99/313 (31%), Gaps = 13/313 (4%)

Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSI 185
           Y+ +     + VW+++  G+ T    +D       ++ + + PD R L VG      +  
Sbjct: 7   YIASPESQQIHVWNLNHEGALTLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPEFRVLA 63

Query: 186 WDLASPTPRIKAELTSSAPAC-YALAISPDSKVCFSCCSDGN----IAVWDLHNQTLVRQ 240
           + +A     +     S+ P     ++     +  F    +        + D     +V  
Sbjct: 64  YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 123

Query: 241 FQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ 300
            +G     S      + T        + +  + + +    V       +    +    + 
Sbjct: 124 VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV 183

Query: 301 RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS 360
                +    + +  + +   E  +         T  +  E  S       + I+PD + 
Sbjct: 184 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 243

Query: 361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-L 419
            +         + V+ +S+ GS            +   R   +   G+ LI  G+ S+ +
Sbjct: 244 LYACDRTASL-ITVFSVSEDGSVLSKEGFQP--TETQPRGFNVDHSGKYLIAAGQKSHHI 300

Query: 420 SIWDLASPTPRIK 432
           S++++      + 
Sbjct: 301 SVYEIVGEQGLLH 313

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 58.3 bits (139), Expect = 7e-10
 Identities = 40/335 (11%), Positives = 103/335 (30%), Gaps = 24/335 (7%)

Query: 173 TLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-DGNIAVW 230
           T+ +    S  + +W+L         ++         + +SPD +  +     +  +  +
Sbjct: 5   TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64

Query: 231 DLHNQTLVRQFQGHT---DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQP 287
            +        F   +      + I     G  ++ G  +    S    E  + V  +   
Sbjct: 65  RIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 124

Query: 288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP 347
                    +    +  +    L  D   L         ++ D      +  AE+T+   
Sbjct: 125 EGLDGCHSANISPDNRTLWVPALKQDRICLF--------TVSDDGHLVAQDPAEVTTVEG 176

Query: 348 AC-YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD----NYIRSVK 402
           A    +   P+ +  +  +    S          G+   V  LD +  +     +   + 
Sbjct: 177 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 236

Query: 403 LLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPAC-YALAISPDSKVCFSCCSD 460
           + PDGR L      ++ ++++ ++     +  E             +    K   +    
Sbjct: 237 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQK 296

Query: 461 -GNIAVWDLHNQTLVRQFQGHT---DGASCIDISA 491
             +I+V+++  +  +   +G      G   + ++A
Sbjct: 297 SHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 331

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 46.0 bits (107), Expect = 5e-06
 Identities = 43/307 (14%), Positives = 89/307 (28%), Gaps = 27/307 (8%)

Query: 212 SPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISADGTKLWTGGLDNTV 269
           S    V  +      I VW+L+++    + Q          + +S D   L+ G      
Sbjct: 1   SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP--- 57

Query: 270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSI 328
                 E  V  + I+        +    L     +  +     G+ + VG   +  +S+
Sbjct: 58  ------EFRVLAYRIAPDDGALTFAAESALPGS--LTHISTDHQGQFVFVGSYNAGNVSV 109

Query: 329 WDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ 388
             L    P    ++      C++  ISPD+++ +  +                       
Sbjct: 110 TRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 169

Query: 389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI---------WDLASPTPRIKAELTSSA 439
                     R +   P+ +      E ++                  T  +  E  S  
Sbjct: 170 EVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 229

Query: 440 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASC---IDISADGTK 495
                + I+PD +  ++C  +   I V+ +     V   +G     +     ++   G  
Sbjct: 230 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKY 289

Query: 496 LWTGGLD 502
           L   G  
Sbjct: 290 LIAAGQK 296

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 61.5 bits (148), Expect = 7e-11
 Identities = 30/347 (8%), Positives = 66/347 (19%), Gaps = 43/347 (12%)

Query: 188 LASPTPRIKAELTSSAPACYALAISPDSK---VCFSCCSDGNIAVW--DLHNQTLVRQFQ 242
           +A       A   S   +C        S+   +       G    W         +    
Sbjct: 5   VAGSAAAASAAAASDGSSC-DHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL 63

Query: 243 GHT--------DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVS 294
           G           G+     S    +   G   + V  +D         DI  P +     
Sbjct: 64  GAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI-ADIELPDAPRF-- 120

Query: 295 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLASPT-----PRIKAELTSSAPA 348
                     +  +        L+     S+  +   +   +                 A
Sbjct: 121 -----SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAA 175

Query: 349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGR 408
                 S  +           +   +      G++   SQ         +          
Sbjct: 176 ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA---VASS 232

Query: 409 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG------- 461
            L     A+  ++          +      +     +A   ++        +        
Sbjct: 233 ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292

Query: 462 --NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW--TGGLDNT 504
             N +               +   +  I  + DG             
Sbjct: 293 AENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEV 338

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 60.4 bits (145), Expect = 1e-10
 Identities = 21/259 (8%), Positives = 63/259 (24%), Gaps = 23/259 (8%)

Query: 134 GCVKVWDIS--QPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDLAS 190
             V+V+D     P +   +           +  +        L+     S+  +   +  
Sbjct: 96  DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155

Query: 191 PT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 245
            +                 A      S  + +  S  +    A          +      
Sbjct: 156 ASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG----IVGAQCTGAQN 211

Query: 246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPV------SQLDCL 299
             +     +  G  +W                 +K         +          Q+   
Sbjct: 212 CSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271

Query: 300 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 359
            ++     +  +   R+ +      N S    +    +    +++   +  A+  + D  
Sbjct: 272 LKNTDGIMILTVEHSRSCLAAA--ENTSSVTAS--VGQTSGPISNGHDS-DAIIAAQDGA 326

Query: 360 SPFFSSHHYKSCVKVWDIS 378
           S  +++      + ++D +
Sbjct: 327 SDNYANSAGTEVLDIYDAA 345

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.4 bits (88), Expect = 0.002
 Identities = 19/238 (7%), Positives = 40/238 (16%), Gaps = 26/238 (10%)

Query: 51  DPHSQMRAPLGPASLAGIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL 110
             H           L  + G   A    V      Q         I PG           
Sbjct: 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAA-------- 176

Query: 111 SHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD 170
                    +                     +Q       S          +    +   
Sbjct: 177 ----THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASS 232

Query: 171 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG----- 225
                +    + +      + + R      S+      +A   ++        +      
Sbjct: 233 ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF--QMVAKLKNTDGIMILTVEHSRSCL 290

Query: 226 ----NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW--TGGLDNTVRSWDLREG 277
               N +               +   +  I  + DG             +  +D    
Sbjct: 291 AAAENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.1 bits (147), Expect = 1e-10
 Identities = 43/368 (11%), Positives = 90/368 (24%), Gaps = 35/368 (9%)

Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 186
            V     G + + D     SK  V  +D       +   ++   GR L+V G  + + + 
Sbjct: 35  SVTLRDAGQIALVDGD---SKKIVKVIDT---GYAVHISRMSASGRYLLVIGRDARIDMI 88

Query: 187 DLASPTPRIKAEL---TSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQ 242
           DL +  P   AE+     +     +     + +            A+ D       +   
Sbjct: 89  DLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 148

Query: 243 GHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD 302
                        +                   +   KV  +           +  +   
Sbjct: 149 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV--NYKDIDNLTVTSIGAA 206

Query: 303 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK--S 360
            ++         R  +     SN      +              P     A     K   
Sbjct: 207 PFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGP 266

Query: 361 PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRD--NYIRSVKLLPDGRTLIV------ 412
            + +SH     + +             +     +        +K  P    L V      
Sbjct: 267 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 326

Query: 413 -GGEASNLSIWDLASPTPRIK-------AELTSSAPACYALAISPDSK-VCFSCCS---- 459
               + +++++DL +   + +       A+L   A        +     V FS  +    
Sbjct: 327 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKND 386

Query: 460 DGNIAVWD 467
              + V D
Sbjct: 387 SSALVVVD 394

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.8 bits (141), Expect = 6e-10
 Identities = 40/361 (11%), Positives = 92/361 (25%), Gaps = 45/361 (12%)

Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNI 227
                 +   +A  +++ D    + +I   + T  A   +   +S   +       D  I
Sbjct: 30  LPNLFSVTLRDAGQIALVDGD--SKKIVKVIDTGYAV--HISRMSASGRYLLVIGRDARI 85

Query: 228 AVWDLHNQTL-----VRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKV 281
            + DL  +       ++         S      +                 D        
Sbjct: 86  DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-- 143

Query: 282 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE 341
             I      T  +Q      +  + ++    +    IV  + +   +         +   
Sbjct: 144 KQIVSTRGMTVDTQT--YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201

Query: 342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTP---------VSQLDCL 392
              +AP           +    ++++      +    +  S                   
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261

Query: 393 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK 452
            +   + S   L DG   ++G +  N   +       +  AEL         +   P S 
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYA-----WKKVAELQGQGGGSLFIKTHPKSS 316

Query: 453 VCFSCCS-------DGNIAVWDLHNQTLVRQFQGHTDGASCID---------ISADGTKL 496
             +   +         ++AV+DL N     Q     + A   +          +  G ++
Sbjct: 317 HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 376

Query: 497 W 497
           W
Sbjct: 377 W 377

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.6 bits (112), Expect = 2e-06
 Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 10/102 (9%)

Query: 405 PDGRTLIVGGEASNLSIWDLASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNI 463
                 +   +A  +++ D    + +I   + T  A   +   +S   +       D  I
Sbjct: 30  LPNLFSVTLRDAGQIALVDGD--SKKIVKVIDTGYAV--HISRMSASGRYLLVIGRDARI 85

Query: 464 AVWDLHNQTL-----VRQFQGHTDGASCIDISADGTKLWTGG 500
            + DL  +       ++         S      +      G 
Sbjct: 86  DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.6 bits (86), Expect = 0.003
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 460 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT 504
            G IA+ D  ++ +V+             +SA G  L   G D  
Sbjct: 41  AGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDAR 84

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Length = 365

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

 Score = 59.1 bits (142), Expect = 4e-10
 Identities = 44/328 (13%), Positives = 79/328 (24%), Gaps = 63/328 (19%)

Query: 169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF---SCCSDG 225
            + + +         S + + SPT  +            A     +++  F   +     
Sbjct: 49  HERKNIYGAAMKK-WSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPY 107

Query: 226 NIAVWDLHN--------------------QTLVRQFQGHTDGASCIDISADGTKLWTGGL 265
            +     +                     Q    Q          +      T L+    
Sbjct: 108 AVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTG---IHGMVFDPTETYLY---- 160

Query: 266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN 325
                S DL    +        G    V  +D     ++ R V + P G  L    EA N
Sbjct: 161 -----SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN 215

Query: 326 -LSIWDLASPT----------PRIKAELTSSAPA-------CYALAISPDSKSPFFSSHH 367
            +  + +   T          P I   +    P            A++   K  F SS  
Sbjct: 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275

Query: 368 YKSCVKVWDISQP--GSKTPVSQLDCLQRD----NYIRSVKLLP-DGRTLIVGGEASN-L 419
            K       I+         + +   L        +  +V   P     + +  +    L
Sbjct: 276 NKF-ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334

Query: 420 SIWDLASPTPRIKAELTSSAPACYALAI 447
            I+          A +    P     AI
Sbjct: 335 EIYRWKDEFLHRVARVRIPEPGFGMNAI 362

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Length = 365

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 38/314 (12%), Positives = 74/314 (23%), Gaps = 55/314 (17%)

Query: 61  GPASLAGIPGGKPAY-------SYHVTT------DGQMQPVPFPPDALIGPGIPRHARQI 107
            P +       +  +        Y V         G            +   +  +  Q 
Sbjct: 84  HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQE 143

Query: 108 NTLSHGEVVCAVTISNPTKYVYTGGKGCVKVW--DISQPGSKTPVSQLDCLQRDNYIRSV 165
           NT  HG     +       Y+Y+      K+W       G    V  +D     ++ R V
Sbjct: 144 NTGIHG-----MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198

Query: 166 KLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 224
            + P G  L    EA N +  + +   T                                
Sbjct: 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH------------------------- 233

Query: 225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWD 283
            +  +          +       A    ++  G  ++ +   +            +  + 
Sbjct: 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY-----IAGFK 288

Query: 284 ISQPGSKTPVSQLDCLQ-RDNYIRSVKLLP-DGRTLIVGGEASN-LSIWDLASPTPRIKA 340
           +   GS      L        +  +V   P     + +  +    L I+          A
Sbjct: 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVA 348

Query: 341 ELTSSAPACYALAI 354
            +    P     AI
Sbjct: 349 RVRIPEPGFGMNAI 362

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Length = 365

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

 Score = 49.5 bits (117), Expect = 5e-07
 Identities = 35/330 (10%), Positives = 81/330 (24%), Gaps = 39/330 (11%)

Query: 194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS--CI 251
            IK            +    + K  +   +    + + + + T +     H  G      
Sbjct: 30  LIKRTEIPQDEPISWMTFDHERKNIY-GAAMKKWSSFAVKSPTEIVHEASHPIGGHPRAN 88

Query: 252 DISADGTKLW---TGGLDNTVRSWDLRE--GCVKVWDISQPGSKTPVSQLDCLQRDNYIR 306
           D   +   ++          V +    +  G   V+ +S+ G      Q    Q +  I 
Sbjct: 89  DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH 148

Query: 307 SVKLLPDGRTLIVGGEASN---LSIWDLASPTPRIKAELTSSAPAC-YALAISPDSKSPF 362
            +   P    L      +N         +     + +            +A+ P     +
Sbjct: 149 GMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLY 208

Query: 363 FSSHHYKSCVKVWDISQPG--------------SKTPVSQLDCLQRDNYIRSVKLLPDGR 408
                  + +  + I                     P    +  +         L   G+
Sbjct: 209 AL-MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267

Query: 409 TLIVGGEASN------LSIWDLASPTPRIKAELTSSAPA----CYALAISPDS-KVCFSC 457
            +     A+       ++ + L       K    S  P       A++  P S +     
Sbjct: 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327

Query: 458 CSD-GNIAVWDLHNQTLVRQFQGHTDGASC 486
               G + ++   ++ L R  +        
Sbjct: 328 DDQEGWLEIYRWKDEFLHRVARVRIPEPGF 357

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 53.0 bits (125), Expect = 3e-08
 Identities = 37/275 (13%), Positives = 73/275 (26%), Gaps = 20/275 (7%)

Query: 223 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKV 281
              NI+V D+ +  +               IS DGTK++      N V   D     V  
Sbjct: 10  ESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68

Query: 282 WDISQPGSKTPVSQLDCLQRDNY-----------------IRSVKLLPDGRTLIVGGEAS 324
              +    +      D  Q                       +VK       L +  +  
Sbjct: 69  TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGK 128

Query: 325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT 384
            L + +    T  +   +T +     ++  SP   +                        
Sbjct: 129 KLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188

Query: 385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA 444
             S +D ++ +     + + P+G    V       +   +               P    
Sbjct: 189 TNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAG 248

Query: 445 LAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQ 478
           +A++PD K  + +      ++V D    T+     
Sbjct: 249 IAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 47.2 bits (110), Expect = 2e-06
 Identities = 46/302 (15%), Positives = 88/302 (29%), Gaps = 33/302 (10%)

Query: 127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSI 185
           Y+       + V D++   S    + +      +      + PDG  + V    SN +SI
Sbjct: 5   YIANSESDNISVIDVT---SNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSI 58

Query: 186 WDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 245
            D A+          SS        +SPD K  +      +           V       
Sbjct: 59  IDTATNNVIATVPAGSSPQGVA---VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG 115

Query: 246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYI 305
                + +S DG KL+     +   S         +  +S   S                
Sbjct: 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS---------------P 160

Query: 306 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSS 365
           + + + PDG  + V    S             I      +AP+      + + +      
Sbjct: 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGI----AVNPEGTKAYV 216

Query: 366 HHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN-LSIWDL 424
            +         +   G+    +++           + + PDG+ + V     N +S+ D 
Sbjct: 217 TNVDKYFNTVSMIDTGTNKITARIPV---GPDPAGIAVTPDGKKVYVALSFCNTVSVIDT 273

Query: 425 AS 426
           A+
Sbjct: 274 AT 275

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 218 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLRE 276
                    +++ D     +  +     D  + I ++ DG K++      NTV   D   
Sbjct: 217 TNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275

Query: 277 G 277
            
Sbjct: 276 N 276

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 49.1 bits (117), Expect = 8e-07
 Identities = 36/274 (13%), Positives = 65/274 (23%), Gaps = 35/274 (12%)

Query: 260 LWTGGLDNTVRSWDLREG------------CVKVWDISQPGSKTPVSQLDCLQRDN---Y 304
            W+GG    VR   +                   W I+    +        L  D    +
Sbjct: 14  FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPH 73

Query: 305 IRSVKLLPDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF 363
           I       DG+ L +  +A+  ++   L          +  +  A + L +    K+ + 
Sbjct: 74  ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYV 132

Query: 364 ---SSHHYKSCVKVWDISQPGSKTPVSQLDC--------LQRDNYIRSVKLLPDGRTLIV 412
              +           D S   S T  + +D         +  D  + +      G+    
Sbjct: 133 FCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATS 192

Query: 413 GGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 471
               S             R    + +        A         +        V      
Sbjct: 193 TCYNSERAVDLAGTMRNDRDWVVVFNVE---RIAAAVKAGNF-KTIGDSKVPVVDGRGES 248

Query: 472 TLVRQFQGHTDGASCIDISADGTKLW-TGGLDNT 504
              R           ++ S DG      G L  T
Sbjct: 249 EFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPT 281

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 36/229 (15%), Positives = 68/229 (29%), Gaps = 40/229 (17%)

Query: 169 PDGRTLIVGGEASN-LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 227
            DG+ L +  +A+  ++   L          +  +  A + L +    K  +  C+   +
Sbjct: 81  YDGKYLFINDKANTRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAEFV 139

Query: 228 A-------VWDLHNQ----------TLVRQFQGHTDGA-SCIDISADGTKLWTGGLDNTV 269
                    + L N           T+   +Q   DG     D    G    +   ++  
Sbjct: 140 IPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNS-- 197

Query: 270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 329
                 E  V +    +       +  D +   N  R    +  G    +G   S + + 
Sbjct: 198 ------ERAVDLAGTMR-------NDRDWVVVFNVERIAAAVKAGNFKTIGD--SKVPVV 242

Query: 330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS 378
           D    +   +       P  + L  SPD K  F ++      V V  I 
Sbjct: 243 DGRGESEFTRYIPVPKNP--HGLNTSPDGKY-FIANGKLSPTVSVIAID 288

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 27/179 (15%), Positives = 52/179 (29%), Gaps = 28/179 (15%)

Query: 160 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF 219
           N  R    +  G    +G   S + + D    +   +       P  + L  SPD K   
Sbjct: 218 NVERIAAAVKAGNFKTIGD--SKVPVVDGRGESEFTRYIPVPKNP--HGLNTSPDGKYFI 273

Query: 220 SCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCI-------------DISADGTKLWTGGL 265
           +       ++V  +    L   F+   +    I                  G    T  +
Sbjct: 274 ANGKLSPTVSVIAI--DKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFI 331

Query: 266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQ----RDNYIRSVKLLPDGRTLIVG 320
           D+ V  W++ +                + Q   +Q     ++   +     DG+ L+V 
Sbjct: 332 DSQVCKWNIADA----IKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL 386

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 465

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.002
 Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 12/142 (8%)

Query: 122 SNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA- 180
            + T+++Y   KG V++W++    S   +               ++ PD    +      
Sbjct: 25  ISDTEFIYREQKGTVRLWNVETNTSTVLIEGKK--IESLRAIRYEISPDREYALFSYNVE 82

Query: 181 --------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 232
                       +  +    P+       S          P  +       + NI     
Sbjct: 83  PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFENNIYYCAH 141

Query: 233 HNQTLVRQFQGHTDGASCIDIS 254
             +  +R      +G     +S
Sbjct: 142 VGKQAIRVVSTGKEGVIYNGLS 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	504
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.98
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.98
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.98
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.93
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.93
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.92
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.92
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.89
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.89
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.89
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.83
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.82
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.8
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.76
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.72
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.71
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.65
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.59
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.56
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.54
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.43
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.42
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.41
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.4
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.36
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.33
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.31
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.3
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.29
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.28
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.26
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.25
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.23
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.2
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.89
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.86
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.79
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.72
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.7
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.49
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.45
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.41
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.38
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.3
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.29
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.26
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.2
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.19
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.19
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.13
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.66
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.64
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.55
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.53
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.49
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.48
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.36
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.31
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.22
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	97.09
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.54
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.32
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	96.28
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	95.81
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	95.8
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.46
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	95.39
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	95.07
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	94.8
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	93.36
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	90.14
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	87.64
d1tl2a_	235	Tachylectin-2 {Japanese horseshoe crab (Tachypleus	84.05

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-50  Score=371.70  Aligned_cols=329  Identities=66%  Similarity=1.068  Sum_probs=292.9

Q ss_pred             CCCCcceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCC
Q psy17188         69 PGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKT  148 (504)
Q Consensus        69 ~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~  148 (504)
                      .++++.+.+..+++|++..+.++++.++....|.+.++++.++|.+.|+|++|+|++++|++|+||.|+|||+.+.....
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~   86 (337)
T d1gxra_           7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKS   86 (337)
T ss_dssp             EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCS
T ss_pred             cCCcccccccCCCCCCEEeeccCCcceecCCCCCCceEEEECCCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccc
Confidence            34567788999999999999999999988889999999999999999999999999999999999999999999877777


Q ss_pred             ceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEE
Q psy17188        149 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  228 (504)
Q Consensus       149 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  228 (504)
                      .+......+|.+.|.+++|+|++++|++++.|+.|++||+...+......+..|...+.+++|+|++.++++++.|+.|+
T Consensus        87 ~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~  166 (337)
T d1gxra_          87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  166 (337)
T ss_dssp             CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77777777899999999999999999999999999999998777767778889999999999999999999999999999


Q ss_pred             EEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEE
Q psy17188        229 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  308 (504)
Q Consensus       229 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  308 (504)
                      +|++.+++.......|...|.+++|++++..+++++.|+.+++||+++++                .+....+...|.++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~----------------~~~~~~~~~~i~~l  230 (337)
T d1gxra_         167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR----------------QLQQHDFTSQIFSL  230 (337)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----------------EEEEEECSSCEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccce----------------eecccccccceEEE
Confidence            99999999999999999999999999999999999999999999999887                33445677889999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc
Q psy17188        309 KLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ  388 (504)
Q Consensus       309 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~  388 (504)
                      +|+|++++|++++.|+.+++||++..+..   .                                               
T Consensus       231 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~-----------------------------------------------  260 (337)
T d1gxra_         231 GYCPTGEWLAVGMESSNVEVLHVNKPDKY---Q-----------------------------------------------  260 (337)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTSSCEE---E-----------------------------------------------
T ss_pred             EEcccccccceeccccccccccccccccc---c-----------------------------------------------
Confidence            99999999999999999999998764210   0                                               


Q ss_pred             cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        389 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                        ...|...|.+++|+|++++|++++.||.|++||+.+++.+...   .|...|++++|+|++++|++|+.||+|+|||+
T Consensus       261 --~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         261 --LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             --ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             --ccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc---cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence              0134566889999999999999999999999999988765443   35678999999999999999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=312.77  Aligned_cols=283  Identities=19%  Similarity=0.316  Sum_probs=241.8

Q ss_pred             eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc---ceeeeecCcCceEEEEECCCCCEEEEEeCCCc
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR---IKAELTSSAPACYALAISPDSKVCFSCCSDGN  226 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  226 (504)
                      ...+....|...|.+++|+|++++|++|+ ||.|+|||+.+....   .......|...|.+++|+|++++|++++.|+.
T Consensus        42 ~~~~~~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~  120 (337)
T d1gxra_          42 ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST  120 (337)
T ss_dssp             EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred             ceEEEECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccc
Confidence            34455558999999999999999999997 799999999865432   23344578899999999999999999999999


Q ss_pred             EEEEECCC--CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        227 IAVWDLHN--QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       227 i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      |++||+..  .+....+..|...+.+++|+|++.++++++.|+.|++|++.+++.               ......+...
T Consensus       121 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~---------------~~~~~~~~~~  185 (337)
T d1gxra_         121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---------------VRQFQGHTDG  185 (337)
T ss_dssp             EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------cccccccccc
Confidence            99999874  456677888999999999999999999999999999999998875               3334456788


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      +.+++|+++++.+++++.|+.+++||+++++.                                   ++.+         
T Consensus       186 v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~-----------------------------------~~~~---------  221 (337)
T d1gxra_         186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-----------------------------------LQQH---------  221 (337)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----------------------------------EEEE---------
T ss_pred             ccccccccccccccccccccccccccccccee-----------------------------------eccc---------
Confidence            99999999999999999999999999876521                                   1111         


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  464 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~  464 (504)
                              .+...|.+++|+|++++|++++.|+.+++||+++.+..   ....|...|++++|+|++++|++++.||.|+
T Consensus       222 --------~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~  290 (337)
T d1gxra_         222 --------DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY---QLHLHESCVLSLKFAYCGKWFVSTGKDNLLN  290 (337)
T ss_dssp             --------ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE---EECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             --------ccccceEEEEEcccccccceeccccccccccccccccc---cccccccccceEEECCCCCEEEEEeCCCeEE
Confidence                    13455779999999999999999999999999876543   3456788899999999999999999999999


Q ss_pred             EEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        465 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       465 iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +||+.+++.+..+. |.+.|++++|+||+++|++||.||+
T Consensus       291 iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~  329 (337)
T d1gxra_         291 AWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             EEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             EEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCe
Confidence            99999999988765 7889999999999999999999986

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.6e-42  Score=312.16  Aligned_cols=293  Identities=14%  Similarity=0.165  Sum_probs=238.6

Q ss_pred             CCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      +.+.+.+++++|+|+.|+.+.++.|.+|++++......+     .+|...|++++|+|+|++||+|+.||+|++||+.+.
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~-----~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~   90 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIY-----TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT   90 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST
T ss_pred             CCCCeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEE-----cCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecc
Confidence            445667889999999999999889999999875433322     379999999999999999999999999999999987


Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE-EEEEcCCCe
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWTGGLDNT  268 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~dg~  268 (504)
                      +......+..|...|.+++|+|++++|++++.  +..+++|++++++.+..+.+|...|.+++|+|++++ |++|+.|+.
T Consensus        91 ~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~  170 (311)
T d1nr0a1          91 THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT  170 (311)
T ss_dssp             TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred             ccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence            76666778899999999999999999999886  456999999999999999999999999999998874 888999999


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |++||+++++.               ......|...|.++.|+|+++++++++.|+.+++||..+......  +..    
T Consensus       171 i~i~d~~~~~~---------------~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~----  229 (311)
T d1nr0a1         171 VAIFEGPPFKF---------------KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV--FED----  229 (311)
T ss_dssp             EEEEETTTBEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--CBC----
T ss_pred             ccccccccccc---------------ccccccccccccccccCcccccccccccccccccccccccccccc--ccc----
Confidence            99999998774               333446778899999999999999999999999999887532111  100    


Q ss_pred             eeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC
Q psy17188        349 CYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPT  428 (504)
Q Consensus       349 i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~  428 (504)
                                                            .......|...|.+++|+|++++|++|+.||.|+|||+++++
T Consensus       230 --------------------------------------~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~  271 (311)
T d1nr0a1         230 --------------------------------------DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK  271 (311)
T ss_dssp             --------------------------------------TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             --------------------------------------cccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence                                                  001112467789999999999999999999999999999886


Q ss_pred             cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        429 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       429 ~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ......... ......+.+.+++++|++++.||.|++||.+
T Consensus       272 ~~~~l~~~~-~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         272 VEKTIPVGT-RIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEEEECCS-SGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             EEEEEECCC-CccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            554443322 1122233444456789999999999999974

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.3e-41  Score=306.24  Aligned_cols=300  Identities=19%  Similarity=0.373  Sum_probs=258.9

Q ss_pred             ecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy17188        155 CLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       155 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~  234 (504)
                      +.+|.+.|++++|+|++++|++|+.||+|+|||+.+++.  ...+.+|...|.+++|+|++.+++++..++.+.+|+...
T Consensus        13 L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~--~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (317)
T d1vyhc1          13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG   90 (317)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             EcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCE--EEEEeCCCCcEEEEeeecccccccccccccccccccccc
Confidence            348999999999999999999999999999999997664  667789999999999999999999999999999999999


Q ss_pred             CeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCC
Q psy17188        235 QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG  314 (504)
Q Consensus       235 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  314 (504)
                      .+....+..|...+.++.++++++.+++++.|+.+++||+++++.               ......+...+.+++|++++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  155 (317)
T d1vyhc1          91 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC---------------VKTFTGHREWVRMVRPNQDG  155 (317)
T ss_dssp             SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE---------------EEEEECCSSCEEEEEECTTS
T ss_pred             cccccccccccccceeeeccCCCceEEeeccCcceeEeeccccee---------------eeEEccCCCcceeeecccCC
Confidence            999999999999999999999999999999999999999998864               23334577889999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccC
Q psy17188        315 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       315 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                      ++|++++.|+.+++|+..+.  .....+..+...+..+.++|+...  .......+                        
T Consensus       156 ~~l~~~~~d~~v~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~------------------------  207 (317)
T d1vyhc1         156 TLIASCSNDQTVRVWVVATK--ECKAELREHRHVVECISWAPESSY--SSISEATG------------------------  207 (317)
T ss_dssp             SEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECCSCGG--GGGGGCCS------------------------
T ss_pred             CEEEEEeCCCeEEEEeeccc--eeeEEEecCCCCceEEEEeecccc--ceeecccc------------------------
Confidence            99999999999999999887  445566778888999999998763  22111111                        


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                         ........++.++++++.|+.|++||+++++.  ...+..|...|++++|+|++++|++++.||.|++||+.+++++
T Consensus       208 ---~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  282 (317)
T d1vyhc1         208 ---SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  282 (317)
T ss_dssp             ---CC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             ---ceeeeeccCCceeEeccCCCEEEEEECCCCcE--EEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEE
Confidence               11333445678999999999999999997754  4456678889999999999999999999999999999999999


Q ss_pred             EEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        475 RQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       475 ~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      .++.+|.+.|++++|+|++++|++||.||+
T Consensus       283 ~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~  312 (317)
T d1vyhc1         283 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQT  312 (317)
T ss_dssp             EEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred             EEEcCCCCCEEEEEEcCCCCEEEEEeCCCe
Confidence            999999999999999999999999999985

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-41  Score=318.34  Aligned_cols=312  Identities=23%  Similarity=0.431  Sum_probs=240.0

Q ss_pred             ceeeecCCCcEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCce-------------eeeeecCCCCceEEEEEccCCC
Q psy17188        106 QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPV-------------SQLDCLQRDNYIRSVKLLPDGR  172 (504)
Q Consensus       106 ~~~~~~h~~~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~-------------~~~~~~~~~~~v~~~~~s~~~~  172 (504)
                      ....++|++.|+|++|+|+|++|++|+|+.|+|||+.++.....+             .......|...|++++|+|+++
T Consensus        55 l~~~~~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~  134 (388)
T d1erja_          55 LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK  134 (388)
T ss_dssp             EEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred             eEeeCCCCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCC
Confidence            345568999999999999999999999999999999875432211             1122335788899999999999


Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEE
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID  252 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~  252 (504)
                      +|++|+.||.|++||...++  ......+|...|.+++|++++..+++++.++.+++||.++.........+... .++.
T Consensus       135 ~l~s~~~dg~v~i~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~  211 (388)
T d1erja_         135 FLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV-TTVA  211 (388)
T ss_dssp             EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEE
T ss_pred             cceecccccccccccccccc--cccccccccccccccccccccccccccccceeeeeeecccccccccccccccc-cccc
Confidence            99999999999999998654  35667889999999999999999999999999999999999988887755554 4555


Q ss_pred             Ec-cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        253 IS-ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       253 ~~-~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      +. +++++|++++.|+.|++||..++..... +..       .......|...|.+++|+|++++|++++.|+.|++||+
T Consensus       212 ~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~-------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~  283 (388)
T d1erja_         212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVER-LDS-------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL  283 (388)
T ss_dssp             ECSTTCCEEEEEETTSCEEEEETTTCCEEEE-EC-------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             ccCCCCCeEEEEcCCCeEEEeecccCcccee-ecc-------ccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEec
Confidence            55 4889999999999999999998764221 110       01223456788999999999999999999999999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ..............                       ...                ......|...|.+++|+|++++|+
T Consensus       284 ~~~~~~~~~~~~~~-----------------------~~~----------------~~~~~~~~~~v~~~~~s~~~~~l~  324 (388)
T d1erja_         284 QNANNKSDSKTPNS-----------------------GTC----------------EVTYIGHKDFVLSVATTQNDEYIL  324 (388)
T ss_dssp             --------------------------------------CE----------------EEEEECCSSCEEEEEECGGGCEEE
T ss_pred             cCCccccccccccc-----------------------cce----------------eeecccccceEEEEEECCCCCEEE
Confidence            87642211111000                       000                111124567789999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEE------CCCCCEEEEeeCCCcEEEEEcC
Q psy17188        412 VGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI------SPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       412 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~------s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      +|+.||.|++||+++++.+  ..+.+|...|+++++      +|++++|++|+.||+|+||+++
T Consensus       325 sg~~dg~i~vwd~~~~~~~--~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         325 SGSKDRGVLFWDKKSGNPL--LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEeCCCEEEEEECCCCcEE--EEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            9999999999999987654  456778889998875      5789999999999999999984

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.3e-42  Score=310.60  Aligned_cols=312  Identities=16%  Similarity=0.318  Sum_probs=254.1

Q ss_pred             CccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC
Q psy17188        101 PRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE  179 (504)
Q Consensus       101 ~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  179 (504)
                      |+..++....||++.|++++|+|++++|++++ |++|+|||+++++....+     ..|...|.+++|+|++.+++++..
T Consensus         5 p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-----~~h~~~V~~~~~~~~~~~~~~~~~   79 (317)
T d1vyhc1           5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSA   79 (317)
T ss_dssp             CCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCCccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEE-----eCCCCcEEEEeeeccccccccccc
Confidence            44444433449999999999999999999998 999999999886543332     378999999999999999999999


Q ss_pred             CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK  259 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  259 (504)
                      ++.+.+|+....+  ....+..|...+.++.|+++++.+++++.|+.+++||+++++.+..+.+|...+.+++|++++++
T Consensus        80 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (317)
T d1vyhc1          80 DMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL  157 (317)
T ss_dssp             TSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred             ccccccccccccc--cccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCE
Confidence            9999999988654  35566788899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        260 LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       260 l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      |++++.|+.|++|++.+++.               ......+...+.++.++|++..+......+...            
T Consensus       158 l~~~~~d~~v~~~~~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------  210 (317)
T d1vyhc1         158 IASCSNDQTVRVWVVATKEC---------------KAELREHRHVVECISWAPESSYSSISEATGSET------------  210 (317)
T ss_dssp             EEEEETTSCEEEEETTTCCE---------------EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------------
T ss_pred             EEEEeCCCeEEEEeecccee---------------eEEEecCCCCceEEEEeeccccceeecccccee------------
Confidence            99999999999999998874               233345677788888888765333222221111            


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                                  ......+.  ++++++.|+.|++||++.....     .....|...|.+++|+|++++|++++.||.|
T Consensus       211 ------------~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  271 (317)
T d1vyhc1         211 ------------KKSGKPGP--FLLSGSRDKTIKMWDVSTGMCL-----MTLVGHDNWVRGVLFHSGGKFILSCADDKTL  271 (317)
T ss_dssp             ------------------CC--EEEEEETTSEEEEEETTTTEEE-----EEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred             ------------eeeccCCc--eeEeccCCCEEEEEECCCCcEE-----EEEeCCCCCEEEEEECCCCCEEEEEECCCeE
Confidence                        11112222  6788888999999998764321     2233578889999999999999999999999


Q ss_pred             EEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        420 SIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      ++||+++++.+.  .+.+|...|++++|+|++++|++|+.||+|+|||
T Consensus       272 ~iwd~~~~~~~~--~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         272 RVWDYKNKRCMK--TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEECCTTSCCCE--EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEECCCCcEEE--EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            999999876544  4567888999999999999999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.5e-41  Score=312.99  Aligned_cols=313  Identities=20%  Similarity=0.349  Sum_probs=245.2

Q ss_pred             EecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccce-------------
Q psy17188        130 TGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK-------------  196 (504)
Q Consensus       130 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------  196 (504)
                      ...++...+|+....... ........+|.+.|+|++|+|||++||+|+ |+.|+|||+.+++....             
T Consensus        34 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~  111 (388)
T d1erja_          34 KQTNDYYILYNPALPREI-DVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPEN  111 (388)
T ss_dssp             EECSSCEEEECTTSCCCE-EEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC----------
T ss_pred             cCCCCcEEEeCCCCCcce-eeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccc
Confidence            344778889987654321 222233447999999999999999999986 89999999987653211             


Q ss_pred             ---eeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        197 ---AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       197 ---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                         .....|...|++++|+|++++|++|+.||.|++||...++.+..+.+|...|.++++++++..+++++.++.+++||
T Consensus       112 ~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d  191 (388)
T d1erja_         112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD  191 (388)
T ss_dssp             -------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeee
Confidence               12235677799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  352 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~  352 (504)
                      .++....                ....+.....++.+.+ ++++|++++.|+.|++||.++..........         
T Consensus       192 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---------  246 (388)
T d1erja_         192 LRTGQCS----------------LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE---------  246 (388)
T ss_dssp             TTTTEEE----------------EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----------
T ss_pred             ccccccc----------------cccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccc---------
Confidence            9987642                2223334445555555 8899999999999999999876321111000         


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcc--
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--  430 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~--  430 (504)
                                                         ......|...|.+++|+|++++|++++.|+.|++||+.+....  
T Consensus       247 -----------------------------------~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~  291 (388)
T d1erja_         247 -----------------------------------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD  291 (388)
T ss_dssp             ---------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred             -----------------------------------cccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccc
Confidence                                               0011245677889999999999999999999999998765432  


Q ss_pred             --------eeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEE------ccCCCEE
Q psy17188        431 --------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI------SADGTKL  496 (504)
Q Consensus       431 --------~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~------s~d~~~l  496 (504)
                              .......|...|++++|+|++++|++|+.||.|++||+.+++++.++++|.+.|+++++      +||+++|
T Consensus       292 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l  371 (388)
T d1erja_         292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF  371 (388)
T ss_dssp             -------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred             cccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEE
Confidence                    22334567788999999999999999999999999999999999999999999999975      6789999


Q ss_pred             EEecCCCC
Q psy17188        497 WTGGLDNT  504 (504)
Q Consensus       497 ~s~s~Dgt  504 (504)
                      +|||.||+
T Consensus       372 ~s~s~Dg~  379 (388)
T d1erja_         372 ATGSGDCK  379 (388)
T ss_dssp             EEEETTSE
T ss_pred             EEEeCCCE
Confidence            99999985

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.8e-39  Score=288.64  Aligned_cols=291  Identities=18%  Similarity=0.269  Sum_probs=224.4

Q ss_pred             ceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcE
Q psy17188        106 QINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  183 (504)
Q Consensus       106 ~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  183 (504)
                      ..+.+ ||.+.|++++|+|++++|++++ |++|++||++++.....   + ...|...|++++|+|+++++ +++.|+.+
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~---~-~~~h~~~v~~v~~~~~g~~~-~~~~d~~v   78 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV---F-PDVHATMITGIKTTSKGDLF-TVSWDDHL   78 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC---S-SCSCSSCEEEEEECTTSCEE-EEETTTEE
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE---E-cCCCCCcEEEEEeeccceee-cccceeeE
Confidence            34445 9999999999999999999998 99999999987533222   1 22688999999999999755 45578999


Q ss_pred             EEEeCCCCCcc-ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188        184 SIWDLASPTPR-IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       184 ~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      ++|+....... .......+...+.+++|+++++++++++ ++.+.+|+...  .....  ....+.+++|+|++++|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--~~~~~--~~~~~~~~~~s~~~~~l~~  153 (299)
T d1nr0a2          79 KVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--LTEVP--ISYNSSCVALSNDKQFVAV  153 (299)
T ss_dssp             EEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--EEEEE--CSSCEEEEEECTTSCEEEE
T ss_pred             EEeccCCccccccccccccccccccccccccccccccccc-ccccccccccc--ccccc--ccccccccccccccccccc
Confidence            99998754322 2333456777899999999998777665 56899998543  33322  3456789999999999999


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      ++.|+.|++||+++++..              ......|...|.+++|+|++++|++++.|+.|++||+.+......   
T Consensus       154 g~~dg~i~~~d~~~~~~~--------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~---  216 (299)
T d1nr0a2         154 GGQDSKVHVYKLSGASVS--------------EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH---  216 (299)
T ss_dssp             EETTSEEEEEEEETTEEE--------------EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC---
T ss_pred             cccccccccccccccccc--------------ccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            999999999999887643              333456778899999999999999999999999999876421100   


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                                                                   ......|...|++++|+|++++|++|+.||.|++|
T Consensus       217 ---------------------------------------------~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iw  251 (299)
T d1nr0a2         217 ---------------------------------------------TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW  251 (299)
T ss_dssp             ---------------------------------------------CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ---------------------------------------------cccccccccccccccccccccceEEEcCCCEEEEE
Confidence                                                         00011356778899999999999999999999999


Q ss_pred             eCCCCCcceeecccC-CCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        423 DLASPTPRIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       423 d~~~~~~~~~~~~~~-~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      |++++.......... +...+..+.| +++++|++++.|+.|++||+.
T Consensus       252 d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         252 NMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             ETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             ECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            998876554444444 4445666654 567899999999999999974

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.3e-38  Score=290.82  Aligned_cols=290  Identities=19%  Similarity=0.370  Sum_probs=244.0

Q ss_pred             cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      +....+.+|...|++++|+|++++|++|+.||+|+|||+.+++.+..+..|...|.+++|+|+++++++++.|+.+++|+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence            34667899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      ........           ........+...... .....+..+.....+.....+.....  ........+...+....
T Consensus       126 ~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  191 (340)
T d1tbga_         126 LKTREGNV-----------RVSRELAGHTGYLSC-CRFLDDNQIVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLS  191 (340)
T ss_dssp             SSSSCSCC-----------CEEEEECCCSSCEEE-EEEEETTEEEEEETTTEEEEEETTTT--EEEEEEECCSSCEEEEE
T ss_pred             cccccccc-----------ccceecccccccccc-cccccccccccccccccccccccccc--cccccccccceeEeeec
Confidence            87654210           001122233333333 33445567778888888888887765  34445555666788888


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      +.+...  +++++..|+.+++||++.....     .....|...|++++|+|++++|++++.|+.|++||+.........
T Consensus       192 ~~~~~~--~~~~~~~d~~v~i~d~~~~~~~-----~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~  264 (340)
T d1tbga_         192 LAPDTR--LFVSGACDASAKLWDVREGMCR-----QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY  264 (340)
T ss_dssp             ECTTSS--EEEEEETTTEEEEEETTTTEEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             cccccc--eeEEeecCceEEEEECCCCcEE-----EEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccc
Confidence            888887  8899999999999998765322     223357889999999999999999999999999999987776666


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ....+...+++++|+|++++|++|+.||.|++||+.+++++..+.+|.+.|++++|+||+++|+|||.||+
T Consensus       265 ~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~  335 (340)
T d1tbga_         265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF  335 (340)
T ss_dssp             CCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred             ccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCE
Confidence            67778888999999999999999999999999999999999999999999999999999999999999986

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-38  Score=287.91  Aligned_cols=288  Identities=15%  Similarity=0.194  Sum_probs=226.0

Q ss_pred             CcceEEEECCCCCcccCCCCCCcccCCCCCccccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCc
Q psy17188         72 KPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTP  149 (504)
Q Consensus        72 ~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~  149 (504)
                      +.+..++++|+|+.++... ++.+++|+.... ...+.+ +|.+.|++++|+|+|++|++|+ ||+|+|||+.+..... 
T Consensus        18 ~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~-~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~-   94 (311)
T d1nr0a1          18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL-   94 (311)
T ss_dssp             TCCCCCEECTTSSEEEEEE-TTEEEEEETTCS-SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE-
T ss_pred             CCeEEEEEcCCCCEEEEEe-CCEEEEEECCCC-ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc-
Confidence            3566777888887776653 445666665433 333344 8999999999999999999998 9999999998754322 


Q ss_pred             eeeeeecCCCCceEEEEEccCCCEEEEecC--CCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCE-EEEEeCCCc
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV-CFSCCSDGN  226 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~  226 (504)
                        ......|...|.+++|+|++++|++++.  +..+++|++++++.  ...+.+|...|.+++|+|++++ |++|+.|+.
T Consensus        95 --~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~--~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~  170 (311)
T d1nr0a1          95 --KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS--NGNLTGQARAMNSVDFKPSRPFRIISGSDDNT  170 (311)
T ss_dssp             --EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB--CBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred             --ccccccccCccccccccccccccccccccccccccccccccccc--cccccccccccccccccccceeeecccccccc
Confidence              2223478899999999999999999875  45699999987654  5567889999999999999884 888999999


Q ss_pred             EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceE
Q psy17188        227 IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIR  306 (504)
Q Consensus       227 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  306 (504)
                      |++||+++++....+..|...|.++.|+|++++|++++.|+.|++||+.++.... .+..       .......|...|.
T Consensus       171 i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~-~~~~-------~~~~~~~h~~~V~  242 (311)
T d1nr0a1         171 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG-VFED-------DSLKNVAHSGSVF  242 (311)
T ss_dssp             EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-ECBC-------TTSSSCSSSSCEE
T ss_pred             cccccccccccccccccccccccccccCccccccccccccccccccccccccccc-cccc-------ccccccccccccc
Confidence            9999999999999999999999999999999999999999999999999876321 1111       1223345778899


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC-ceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        307 SVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-ACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       307 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      +++|+|++++|++++.||.|++||+++++.  ...+..+.. ....+.+.++++  .+++++.||.|++||.+
T Consensus       243 ~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~--~~~l~~~~~~~~~~~~~~~~~~--~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         243 GLTWSPDGTKIASASADKTIKIWNVATLKV--EKTIPVGTRIEDQQLGIIWTKQ--ALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEECCSSGGGCEEEEEECSS--CEEEEETTCCEEEEETT
T ss_pred             ccccCCCCCEEEEEeCCCeEEEEECCCCcE--EEEEECCCCccceEEEEEecCC--EEEEEECCCEEEEEeCC
Confidence            999999999999999999999999988743  334443322 222333444444  58888899999999963

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.7e-39  Score=300.71  Aligned_cols=294  Identities=13%  Similarity=0.125  Sum_probs=234.8

Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-  237 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-  237 (504)
                      ..+|+|++|+||+++||+++.|+.|+|||+.+++......+.+|...|.+++|+|++++|++++.|++|++||+.+++. 
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence            4679999999999999999999999999998877667788899999999999999999999999999999999987754 


Q ss_pred             -EEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        238 -VRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       238 -~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                       ...+.+|...|.+++|+|+++.|++++.|+++++|++........           .......+...|.+++|+|++++
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~-----------~~~~~~~~~~~v~~v~~~p~~~~  155 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV-----------CKHIKKPIRSTVLSLDWHPNSVL  155 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE-----------EEEECTTCCSCEEEEEECTTSSE
T ss_pred             cccccccccccccccccccccccceeecccCcceeeeeeccccccc-----------ccccccccccccccccccccccc
Confidence             445567899999999999999999999999999999876542110           02223456778999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCCc----------------cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTP----------------RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~----------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      |++++.|+.+++|+......                ........|...+.+++|+|+++  .+++++.|+.|++||+...
T Consensus       156 l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~s~~~d~~i~iwd~~~~  233 (371)
T d1k8kc_         156 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS--RVAWVSHDSTVCLADADKK  233 (371)
T ss_dssp             EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS--EEEEEETTTEEEEEEGGGT
T ss_pred             eeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccc--cccccccCCcceEEeeecc
Confidence            99999999999999865421                23345567788899999999998  7889999999999999765


Q ss_pred             CCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee----------------------------
Q psy17188        381 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK----------------------------  432 (504)
Q Consensus       381 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~----------------------------  432 (504)
                      ...     .....|..+|.+++|+|++++|++|. |+.+++|..........                            
T Consensus       234 ~~~-----~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (371)
T d1k8kc_         234 MAV-----ATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK  307 (371)
T ss_dssp             TEE-----EEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred             cce-----eeeecccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccce
Confidence            322     22335678899999999998888765 67766665432211100                            


Q ss_pred             -----------ecccCCCCceeEEEECCCC----CEEEEeeCCCcEEEEEcCCc
Q psy17188        433 -----------AELTSSAPACYALAISPDS----KVCFSCCSDGNIAVWDLHNQ  471 (504)
Q Consensus       433 -----------~~~~~~~~~v~~l~~s~~~----~~l~s~~~dg~i~iwd~~~~  471 (504)
                                 .....|...|+++++.+.+    ..++|++.||.|+|||+++.
T Consensus       308 ~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~  361 (371)
T d1k8kc_         308 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  361 (371)
T ss_dssp             C---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             eEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcC
Confidence                       0011367789999997754    46899999999999998653

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-38  Score=296.55  Aligned_cols=306  Identities=14%  Similarity=0.152  Sum_probs=235.5

Q ss_pred             CCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy17188        113 GEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       113 ~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      .++|+|++|+|++++||+++ |+.|+|||+++++   ......+.+|.+.|++++|+|++++|++++.|++|++||+.+.
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~---~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~   83 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK---WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR   83 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE---EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC---EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence            47899999999999999888 8999999987642   2222334489999999999999999999999999999999877


Q ss_pred             CccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEeecCCCCCeEEEEEccCCCEEEEEcCCC
Q psy17188        192 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGASCIDISADGTKLWTGGLDN  267 (504)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  267 (504)
                      +......+..|...|.+++|+|+++.|++++.|+.|++|+++...    .......|...|.+++|+|++++|++++.|+
T Consensus        84 ~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~  163 (371)
T d1k8kc_          84 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF  163 (371)
T ss_dssp             EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred             ccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCc
Confidence            666666677889999999999999999999999999999887653    3344567999999999999999999999999


Q ss_pred             eEEEEECCCCceEEEeecCC---CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc
Q psy17188        268 TVRSWDLREGCVKVWDISQP---GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       268 ~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      ++++|+..............   .............+...+.+++|+|++++|++++.|+.|++||+.++  .....+..
T Consensus       164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~--~~~~~~~~  241 (371)
T d1k8kc_         164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK--MAVATLAS  241 (371)
T ss_dssp             CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT--TEEEEEEC
T ss_pred             EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecc--cceeeeec
Confidence            99999987654221100000   00001112334567788999999999999999999999999999876  45566777


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC----------cc--------------------------cc
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT----------PV--------------------------SQ  388 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~----------~~--------------------------~~  388 (504)
                      |..++.+++|+|+++  +++++. |+.+++|.........          ..                          ..
T Consensus       242 ~~~~v~s~~fs~d~~--~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (371)
T d1k8kc_         242 ETLPLLAVTFITESS--LVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA  318 (371)
T ss_dssp             SSCCEEEEEEEETTE--EEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------C
T ss_pred             ccccceeeeecCCCC--EEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccc
Confidence            888999999999987  566554 6766666543211000          00                          00


Q ss_pred             cccccCCCceEEEEEcCCC----CEEEEeeCCCcEEEeeCCC
Q psy17188        389 LDCLQRDNYIRSVKLLPDG----RTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       389 ~~~~~~~~~i~~~~~s~~g----~~l~~~~~dg~i~iwd~~~  426 (504)
                      .....|.+.|+++++.+.+    ..|++++.||.|++||+++
T Consensus       319 ~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         319 GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             CCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             eecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            0011277889999998754    4689999999999999864

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.7e-37  Score=283.56  Aligned_cols=291  Identities=19%  Similarity=0.352  Sum_probs=245.2

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +..+++ ||.+.|++++|+|++++|++|+ ||+|+|||+.++..   +..+  ..|...|.+++|+|+++++++++.|+.
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~---~~~~--~~~~~~v~~v~~~~~~~~l~~~~~d~~  120 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNK---VHAI--PLRSSWVMTCAYAPSGNYVACGGLDNI  120 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE---EEEE--ECSCSCEEEEEECTTSSEEEEEETTCC
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeeccccee---EEEE--ecccccEEeeEeeccceeeeeecccce
Confidence            444556 9999999999999999999998 99999999987532   2222  368999999999999999999999999


Q ss_pred             EEEEeCCCCCcc--ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE
Q psy17188        183 LSIWDLASPTPR--IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL  260 (504)
Q Consensus       183 i~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  260 (504)
                      +.+|+.......  ....+.+|.......... .+..+.....+.....++............+...+....+.+.+.++
T Consensus       121 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (340)
T d1tbga_         121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF  199 (340)
T ss_dssp             EEEEESSSSCSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             eecccccccccccccceecccccccccccccc-cccccccccccccccccccccccccccccccceeEeeecccccccee
Confidence            999998764432  344556677666655554 44577888899999999999988888888899999999999999999


Q ss_pred             EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        261 WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       261 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      ++++.|+.|++||+++++.               ......|...|.+++|+|++++|++++.|+.|++||++........
T Consensus       200 ~~~~~d~~v~i~d~~~~~~---------------~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~  264 (340)
T d1tbga_         200 VSGACDASAKLWDVREGMC---------------RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY  264 (340)
T ss_dssp             EEEETTTEEEEEETTTTEE---------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             EEeecCceEEEEECCCCcE---------------EEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccc
Confidence            9999999999999998874               2334467889999999999999999999999999999987665556


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      ....+...+..++|+|+++  ++++++.|+.|++||+......     .....|...|++++|+|++++|++|+.||.|+
T Consensus       265 ~~~~~~~~i~~~~~s~~~~--~l~~g~~dg~i~iwd~~~~~~~-----~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~  337 (340)
T d1tbga_         265 SHDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRA-----GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             CCTTCCSCEEEEEECSSSC--EEEEEETTSCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             ccccccCceEEEEECCCCC--EEEEEECCCEEEEEECCCCcEE-----EEEcCCCCCEEEEEEeCCCCEEEEEccCCEEE
Confidence            6667778899999999998  8999999999999999865332     22335788999999999999999999999999


Q ss_pred             Eee
Q psy17188        421 IWD  423 (504)
Q Consensus       421 iwd  423 (504)
                      +||
T Consensus       338 iWd  340 (340)
T d1tbga_         338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-37  Score=287.66  Aligned_cols=319  Identities=18%  Similarity=0.279  Sum_probs=242.2

Q ss_pred             eecCCCcE-EEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEE
Q psy17188        109 TLSHGEVV-CAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  186 (504)
Q Consensus       109 ~~~h~~~V-~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  186 (504)
                      .-||.+.| +|++|  ++++|++|+ |++|+|||+.+++   .+..  +.+|.+.|++++|+|+ .+|++++.|++|++|
T Consensus         8 L~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~---~~~~--l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw   79 (355)
T d1nexb2           8 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---FLLQ--LSGHDGGVWALKYAHG-GILVSGSTDRTVRVW   79 (355)
T ss_dssp             EECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTE---EEEE--EECCSSCEEEEEEETT-TEEEEEETTCCEEEE
T ss_pred             ECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCc---EEEE--EECCCCCEEEEEEcCC-CEEEEEecccccccc
Confidence            33898764 77666  578999988 9999999998753   3333  3379999999999985 589999999999999


Q ss_pred             eCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee-----------------------cC
Q psy17188        187 DLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-----------------------QG  243 (504)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----------------------~~  243 (504)
                      +....+.........+...+....+.+++.++++++.|+.|++||+.+.......                       ..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d1nexb2          80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  159 (355)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred             cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence            9987665444444445555667788899999999999999999999876543221                       22


Q ss_pred             CCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        244 HTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       244 h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      |...+.  .+.++++.++++..|+.+++||+++++.               ......+...+.++.++++++.+++++.|
T Consensus       160 ~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  222 (355)
T d1nexb2         160 HMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKC---------------LYILSGHTDRIYSTIYDHERKRCISASMD  222 (355)
T ss_dssp             CSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEE---------------EEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred             cccccc--ccccccceeeeecccceeeeeecccccc---------------eeeeeccccccccccccccceeeeccccc
Confidence            333333  3455688999999999999999998864               22334456778899999999999999999


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEE-EE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRS-VK  402 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-~~  402 (504)
                      +.|++||.+++  .....+..|...+.+++++++    ++++++.|+.|++||++.....       ...|...+.. ..
T Consensus       223 ~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~~~~----~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~~~  289 (355)
T d1nexb2         223 TTIRIWDLENG--ELMYTLQGHTALVGLLRLSDK----FLVSAAADGSIRGWDANDYSRK-------FSYHHTNLSAITT  289 (355)
T ss_dssp             SCEEEEETTTC--CEEEEECCCSSCCCEEEECSS----EEEEECTTSEEEEEETTTCCEE-------EEEECTTCCCCCE
T ss_pred             ceEEeeecccc--ccccccccccccccccccccc----eeeeeeccccccccccccccee-------cccccCCceEEEE
Confidence            99999999877  456677788899999999764    7999999999999999764321       1123333444 45


Q ss_pred             EcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        403 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       403 ~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      +++++++|++| .|+.|++||+++++.+. ..+.+|...|++++|+|+ .++++++.||.++||.+
T Consensus       290 ~~~~~~~l~~g-~d~~i~vwd~~tg~~~~-~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         290 FYVSDNILVSG-SENQFNIYNLRSGKLVH-ANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             EEECSSEEEEE-ETTEEEEEETTTCCBCC-SCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             EcCCCCEEEEE-eCCEEEEEECCCCCEEE-EEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            67788777666 58999999999887543 245678889999999986 57888999999766643

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-36  Score=278.92  Aligned_cols=326  Identities=15%  Similarity=0.228  Sum_probs=243.0

Q ss_pred             ecCCCCce-EEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy17188        155 CLQRDNYI-RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  233 (504)
Q Consensus       155 ~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~  233 (504)
                      +.+|...| +|++|  ++++|++|+.||+|+|||+.+++  ....+.+|...|++++|+|+ .+|++++.|+.|++|++.
T Consensus         8 L~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~--~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~   82 (355)
T d1nexb2           8 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIK   82 (355)
T ss_dssp             EECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTE--EEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETT
T ss_pred             ECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCc--EEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccccc
Confidence            44898875 55555  68899999999999999998765  46778999999999999986 489999999999999999


Q ss_pred             CCeEEEeecCCCC--CeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCC--------CCCCCcccceecccCC
Q psy17188        234 NQTLVRQFQGHTD--GASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQP--------GSKTPVSQLDCLQRDN  303 (504)
Q Consensus       234 ~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~  303 (504)
                      ..+.......+..  ......+.+++..+++++.|+.|++||+.+...........        .............+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (355)
T d1nexb2          83 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA  162 (355)
T ss_dssp             TTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSS
T ss_pred             ccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccc
Confidence            9988777664443  34556677888899999999999999998765321100000        0000000111112222


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      .+  ..+.++++.++++..|+.+++||+++.  ........+...+..+.+++++.  .+++++.|+.|++||++.....
T Consensus       163 ~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~i~d~~~~~~~  236 (355)
T d1nexb2         163 SV--RTVSGHGNIVVSGSYDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERK--RCISASMDTTIRIWDLENGELM  236 (355)
T ss_dssp             CE--EEEEEETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTCCEE
T ss_pred             cc--cccccccceeeeecccceeeeeecccc--cceeeeeccccccccccccccce--eeecccccceEEeeeccccccc
Confidence            23  345567889999999999999999876  44555666777899999999998  7899999999999999865332


Q ss_pred             CcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeE-EEECCCCCEEEEeeCCCc
Q psy17188        384 TPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA-LAISPDSKVCFSCCSDGN  462 (504)
Q Consensus       384 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-l~~s~~~~~l~s~~~dg~  462 (504)
                           .....|...|.++++++  ++|++++.||.|++||+++.......    |...+.. ..+++++++|++| .|+.
T Consensus       237 -----~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~g-~d~~  304 (355)
T d1nexb2         237 -----YTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSY----HHTNLSAITTFYVSDNILVSG-SENQ  304 (355)
T ss_dssp             -----EEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEEE----ECTTCCCCCEEEECSSEEEEE-ETTE
T ss_pred             -----ccccccccccccccccc--ceeeeeecccccccccccccceeccc----ccCCceEEEEEcCCCCEEEEE-eCCE
Confidence                 22346788899999874  69999999999999999876543322    2233333 3567788877766 5899


Q ss_pred             EEEEEcCCcceEE-EEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        463 IAVWDLHNQTLVR-QFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       463 i~iwd~~~~~~~~-~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      |+|||+++++++. .+.+|.+.|++++|+|+ ..+++++.||+
T Consensus       305 i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~  346 (355)
T d1nexb2         305 FNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQ  346 (355)
T ss_dssp             EEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSC
T ss_pred             EEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCc
Confidence            9999999999885 46789999999999987 57888899985

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.2e-36  Score=271.34  Aligned_cols=283  Identities=19%  Similarity=0.242  Sum_probs=225.0

Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....+.+|...|++++|+|++++|++|+.||+|++||+++++.+..+. .|...|++++|+|+++ +++++.|+.+++|+
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~   82 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVP   82 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEEC
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEec
Confidence            356789999999999999999999999999999999999999888884 6899999999999986 55667799999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      .......            ........+...+.+++++++++.+++++ ++.+.+|+....    ...  .....+.+++
T Consensus        83 ~~~~~~~------------~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~----~~~--~~~~~~~~~~  143 (299)
T d1nr0a2          83 AGGSGVD------------SSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKL----TEV--PISYNSSCVA  143 (299)
T ss_dssp             SSSSSSC------------TTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEE----EEE--ECSSCEEEEE
T ss_pred             cCCcccc------------ccccccccccccccccccccccccccccc-cccccccccccc----ccc--cccccccccc
Confidence            8764321            00222334567789999999999777665 568999985432    111  2234678899


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce-e
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI-K  432 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~-~  432 (504)
                      ++|+++  ++++++.++.+++||++...    ........|...|.+++|+|++++|++++.|+.|++||+.++.... .
T Consensus       144 ~s~~~~--~l~~g~~dg~i~~~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~  217 (299)
T d1nr0a2         144 LSNDKQ--FVAVGGQDSKVHVYKLSGAS----VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT  217 (299)
T ss_dssp             ECTTSC--EEEEEETTSEEEEEEEETTE----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC
T ss_pred             cccccc--cccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999988  88999999999999997642    2223344678899999999999999999999999999998765433 3


Q ss_pred             ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE--eec-CCceEEEEEccCCCEEEEecCCCC
Q psy17188        433 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF--QGH-TDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~h-~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ..+..|...|++++|+|++++|++|+.||.|++||+++++....+  ..| ...+.++.| +++++|+++|.||+
T Consensus       218 ~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~  291 (299)
T d1nr0a2         218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSN  291 (299)
T ss_dssp             CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSC
T ss_pred             ccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCE
Confidence            345678889999999999999999999999999999887654333  233 445666655 56789999999986

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=270.99  Aligned_cols=309  Identities=18%  Similarity=0.350  Sum_probs=243.1

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      +|.+.|.+ +++++|++||+|+.||+|+|||+.+++.  ...+.+|...|.+++|+++  +|++++.|+.+++|+.....
T Consensus        14 GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~--~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~   88 (342)
T d2ovrb2          14 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC--LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGE   88 (342)
T ss_dssp             CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE--EEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTE
T ss_pred             CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCE--EEEEeCCCCCEEEEEeCCC--ccccceeccccccccccccc
Confidence            89999865 4677899999999999999999987664  6678899999999999875  99999999999999999998


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .......+...+......  ...+..+..|+.+.+|+..+++....               .....  .......+....
T Consensus        89 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~---------------~~~~~--~~~~~~~~~~~~  149 (342)
T d2ovrb2          89 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHV---------------LMGHV--AAVRCVQYDGRR  149 (342)
T ss_dssp             EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEE---------------EECCS--SCEEEEEECSSC
T ss_pred             ceecccccceeEeeeecc--cccccccccceeEEEeecccccceee---------------eeccc--ccceeeccccce
Confidence            888887777777666554  45788899999999999998864321               11111  122334456678


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.++.+++||....  .....+..|...+....+  ++.  .+++++.|+.|++||++.....     .....|..
T Consensus       150 ~~~~~~d~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~--~~~--~l~s~~~dg~i~~~d~~~~~~~-----~~~~~~~~  218 (342)
T d2ovrb2         150 VVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQF--DGI--HVVSGSLDTSIRVWDVETGNCI-----HTLTGHQS  218 (342)
T ss_dssp             EEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEE--CSS--EEEEEETTSCEEEEETTTCCEE-----EEECCCCS
T ss_pred             eeeecCCCeEEEeecccc--eeeEEEcCcccccccccC--CCC--EEEEEeCCCeEEEeecccceee-----eEeccccc
Confidence            899999999999999865  344556666555555544  555  7999999999999999865322     22335677


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec-ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  475 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~  475 (504)
                      .+.+++++  +++|++++.|+.|++||+...+...... ...|...+.++.++  ++++++|+.||.|++||+++++++.
T Consensus       219 ~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~  294 (342)
T d2ovrb2         219 LTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR  294 (342)
T ss_dssp             CEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             ceeEEecC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEE
Confidence            78777776  4699999999999999998776544433 34456667666665  5799999999999999999999988


Q ss_pred             EEe-----ecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        476 QFQ-----GHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       476 ~~~-----~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      .+.     +|...|++++|+|++.+|++|+.|||
T Consensus       295 ~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt  328 (342)
T d2ovrb2         295 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT  328 (342)
T ss_dssp             EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred             EEecccCCCCCCCEEEEEECCCCCEEEEEeCCCC
Confidence            875     47778999999999999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-35  Score=268.26  Aligned_cols=325  Identities=17%  Similarity=0.325  Sum_probs=245.3

Q ss_pred             cceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCc
Q psy17188        105 RQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  182 (504)
Q Consensus       105 ~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  182 (504)
                      +....+ ||++.|.+ +++++|++|++|+ |++|+|||+.+++   .+..  +.+|.+.|.+++|+++  +|++++.|+.
T Consensus         7 ~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~---~~~~--~~~h~~~V~~v~~~~~--~l~s~s~D~~   78 (342)
T d2ovrb2           7 KSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK---CLRT--LVGHTGGVWSSQMRDN--IIISGSTDRT   78 (342)
T ss_dssp             CCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC---EEEE--CCCCSSCEEEEEEETT--EEEEEETTSC
T ss_pred             CcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCC---EEEE--EeCCCCCEEEEEeCCC--ccccceeccc
Confidence            334445 99998754 3566789999998 9999999998764   2333  3379999999999874  8999999999


Q ss_pred             EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEE
Q psy17188        183 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWT  262 (504)
Q Consensus       183 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  262 (504)
                      +++|+......  ......+...+......  ...+..+..|+.+.+|+..+++....+..+......  ..+....+++
T Consensus        79 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  152 (342)
T d2ovrb2          79 LKVWNAETGEC--IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVS  152 (342)
T ss_dssp             EEEEETTTTEE--EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEE--EEECSSCEEE
T ss_pred             ccccccccccc--eecccccceeEeeeecc--cccccccccceeEEEeecccccceeeeeccccccee--eccccceeee
Confidence            99999886543  33344445555555543  457888999999999999999888887755554433  3445668999


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      ++.|+.+++||....+..               .....+...+  ..+.+++.++++++.||.|++||++..  ......
T Consensus       153 ~~~d~~i~~~d~~~~~~~---------------~~~~~~~~~~--~~~~~~~~~l~s~~~dg~i~~~d~~~~--~~~~~~  213 (342)
T d2ovrb2         153 GAYDFMVKVWDPETETCL---------------HTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETG--NCIHTL  213 (342)
T ss_dssp             EETTSCEEEEEGGGTEEE---------------EEECCCSSCE--EEEEECSSEEEEEETTSCEEEEETTTC--CEEEEE
T ss_pred             ecCCCeEEEeecccceee---------------EEEcCccccc--ccccCCCCEEEEEeCCCeEEEeecccc--eeeeEe
Confidence            999999999999877642               2223344434  444557889999999999999999877  445667


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEe
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  422 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iw  422 (504)
                      ..|...+.+++++++    ++++++.|+.|++||+........+.  ....+...+.++.++  ++++++++.||.|++|
T Consensus       214 ~~~~~~v~~~~~~~~----~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iw  285 (342)
T d2ovrb2         214 TGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQCLQTLQ--GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW  285 (342)
T ss_dssp             CCCCSCEEEEEEETT----EEEEEETTSCEEEEETTTCCEEEEEC--STTSCSSCEEEEEEC--SSEEEEEETTSEEEEE
T ss_pred             cccccceeEEecCCC----EEEEEcCCCEEEEEeccccccccccc--ccceeeeceeecccC--CCeeEEEcCCCEEEEE
Confidence            778888888887764    89999999999999998754322221  122355666666665  5699999999999999


Q ss_pred             eCCCCCcceeec---ccCCCCceeEEEECCCCCEEEEeeCCCc----EEEEEcCC
Q psy17188        423 DLASPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDGN----IAVWDLHN  470 (504)
Q Consensus       423 d~~~~~~~~~~~---~~~~~~~v~~l~~s~~~~~l~s~~~dg~----i~iwd~~~  470 (504)
                      |+++++.+....   ..+|...|++++|+|++.+|++|+.||+    |++||++.
T Consensus       286 d~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             ECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            999887655443   3456778999999999999999999985    99999863

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.9e-35  Score=266.39  Aligned_cols=293  Identities=14%  Similarity=0.185  Sum_probs=217.6

Q ss_pred             cEEEEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCC-CCceEEEEEcc--CCCEEEEecCCCcEEEEeCCCC
Q psy17188        115 VVCAVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQR-DNYIRSVKLLP--DGRTLIVGGEASNLSIWDLASP  191 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~  191 (504)
                      .+++++|+|+++.|+.+++..+.++.++....... ......+| ...|++++|+|  ++++|++|+.||+|+|||+...
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~-~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~   97 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVP-PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   97 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSC-SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCcc-ceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCC
Confidence            45789999999999988755544444333221111 22233355 56799999998  6789999999999999998754


Q ss_pred             Cccce------eeeecCcCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCE-EEE
Q psy17188        192 TPRIK------AELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK-LWT  262 (504)
Q Consensus       192 ~~~~~------~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s  262 (504)
                      +....      .....|..+|.+++|++++++|++++.  ++.+.+|+.++++.+..+.+|...|.+++|+|++.+ +++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  177 (325)
T d1pgua1          98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMT  177 (325)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred             cceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEE
Confidence            43221      234568888999999999999887764  678999999999999999999999999999998764 778


Q ss_pred             EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCccceee
Q psy17188        263 GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GRTLIVGGEASNLSIWDLASPTPRIKAE  341 (504)
Q Consensus       263 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~  341 (504)
                      ++.|+.+++||....+....            ......+...|.+++|+|+ +++|++++.|+.|++||+++++  ....
T Consensus       178 ~~~d~~v~~~d~~~~~~~~~------------~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~--~~~~  243 (325)
T d1pgua1         178 VGDDGSVVFYQGPPFKFSAS------------DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--FLKY  243 (325)
T ss_dssp             EETTTEEEEEETTTBEEEEE------------ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--EEEE
T ss_pred             eeccccccccccccccccee------------cccccCCCCccEEeeeccccceeccccccccceeeeeecccc--cccc
Confidence            99999999999987764321            1222356777999999996 6889999999999999988763  2222


Q ss_pred             eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188        342 LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI  421 (504)
Q Consensus       342 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i  421 (504)
                      +..|...+                                             ...+.+++| |++++|++++.|+.|+|
T Consensus       244 l~~~~~~v---------------------------------------------~~~~~s~~~-~dg~~l~s~s~D~~i~i  277 (325)
T d1pgua1         244 IEDDQEPV---------------------------------------------QGGIFALSW-LDSQKFATVGADATIRV  277 (325)
T ss_dssp             CCBTTBCC---------------------------------------------CSCEEEEEE-SSSSEEEEEETTSEEEE
T ss_pred             cccccccc---------------------------------------------ccceeeeec-cCCCEEEEEeCCCeEEE
Confidence            22222111                                             112334444 57889999999999999


Q ss_pred             eeCCCCCcceeecccCCCCceeEEEECCC-CCEEEEeeCCCcEEEEEc
Q psy17188        422 WDLASPTPRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       422 wd~~~~~~~~~~~~~~~~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd~  468 (504)
                      ||+++++.+.......+...+..+++.+. +.+|++++.||.|+|||+
T Consensus       278 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         278 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             EECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            99998877666666666655555555443 358899999999999996

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=1.5e-34  Score=267.51  Aligned_cols=329  Identities=13%  Similarity=0.066  Sum_probs=239.2

Q ss_pred             EEEEcC-CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC--cEEEEeCCCCCcc
Q psy17188        118 AVTISN-PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS--NLSIWDLASPTPR  194 (504)
Q Consensus       118 ~v~~s~-~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~  194 (504)
                      +-.||| ||+++|++++|.|++||++.+.   . ..   ..|...|.+++|+|||++|++++.+.  .|++||+++++  
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~---~-~~---~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~--   77 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTY---V-LK---VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--   77 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSB---E-EE---CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCc---E-EE---ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc--
Confidence            467999 9999999999999999997642   1 11   26889999999999999998876543  79999998765  


Q ss_pred             ceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------
Q psy17188        195 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------  264 (504)
Q Consensus       195 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------  264 (504)
                       ...+..|...|.+++|+|++++|++++.++.+++|++.+++....+..|...+.+++|+|+|++|+.+.          
T Consensus        78 -~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~  156 (360)
T d1k32a3          78 -AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY  156 (360)
T ss_dssp             -EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred             -EEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeec
Confidence             445678899999999999999999999999999999999999999999999999999999999998643          


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc-----ce
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-----IK  339 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-----~~  339 (504)
                      .++.+++||+.+++.                .....+...+..++|+|+|++|++++.++.+.+|+.......     ..
T Consensus       157 ~~~~~~v~d~~~~~~----------------~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~  220 (360)
T d1k32a3         157 VMQAIHVYDMEGRKI----------------FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP  220 (360)
T ss_dssp             CEEEEEEEETTTTEE----------------EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEE
T ss_pred             cccceeeeccccCce----------------eeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccce
Confidence            445789999998763                333455667888999999999999999999999997654211     11


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCC---CeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCC---CEEEEe
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYK---SCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDG---RTLIVG  413 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g---~~l~~~  413 (504)
                      .....+......+.+++++..  +.++..+   ...++|.+......  .  .....+...+..+.+.+.+   .+++.+
T Consensus       221 ~~~~~~~~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (360)
T d1k32a3         221 FVIPLIPGSPNPTKLVPRSMT--SEAGEYDLNDMYKRSSPINVDPGD--Y--RMIIPLESSILIYSVPVHGEFAAYYQGA  294 (360)
T ss_dssp             EEEESSTTCCCGGGCCCGGGS--CCCCCCCCTTGGGGCEECSCCCBC--E--EEEEECSSEEEEEECCCCCSHHHHHHCC
T ss_pred             EEEecccCccccceECCCcCc--ccccceeecccccceeecccCcCc--e--eEeeecCCCceEEEEEecCCCeeEEEec
Confidence            112223333444455555542  2222111   11123322211100  0  0111223334444444433   356677


Q ss_pred             eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce
Q psy17188        414 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  484 (504)
Q Consensus       414 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v  484 (504)
                      +.++.|++||+.+++...      +...|..++|+|||++|++++.||.|++||+++++...++..+..++
T Consensus       295 ~~~~~i~~~d~~~~~~~~------~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~  359 (360)
T d1k32a3         295 PEKGVLLKYDVKTRKVTE------VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL  359 (360)
T ss_dssp             CCCEEEEEEETTTCCEEE------EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred             CCCCEEEEEECCCCeEEE------ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence            788999999998765321      23458899999999999999999999999999998888776555543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-33  Score=255.58  Aligned_cols=287  Identities=14%  Similarity=0.168  Sum_probs=212.6

Q ss_pred             cceEEEECCCCCcccCCCCCCccc-CCCC-Cccccceeee-cC-CCcEEEEEEcC--CCcEEEEec-CCeEEEEeCCCCC
Q psy17188         73 PAYSYHVTTDGQMQPVPFPPDALI-GPGI-PRHARQINTL-SH-GEVVCAVTISN--PTKYVYTGG-KGCVKVWDISQPG  145 (504)
Q Consensus        73 ~v~~~~~s~~g~~~~~~~~~~~~~-~~~~-~~~~~~~~~~-~h-~~~V~~v~~s~--~~~~l~~~~-d~~i~vw~~~~~~  145 (504)
                      .+.+++++|+|+.++++..+..++ .+.. ......+..+ +| ...|++++|+|  ++++|++++ ||+|+|||+..+.
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~   98 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK   98 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence            456677888887777665444332 2222 2223334444 66 57899999997  678999988 9999999987654


Q ss_pred             CCCceee---eeecCCCCceEEEEEccCCCEEEEec--CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCE-EE
Q psy17188        146 SKTPVSQ---LDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV-CF  219 (504)
Q Consensus       146 ~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~  219 (504)
                      ....+..   .....|.+.|.+++|++++++|++++  .++.+.+|+.++++  ....+.+|...|.+++|+|++++ ++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~  176 (325)
T d1pgua1          99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SLGEVSGHSQRINACHLKQSRPMRSM  176 (325)
T ss_dssp             GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred             ceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc--cceeeeecccccccccccccccceEE
Confidence            3332221   12235788999999999999998775  46789999998665  35667889999999999998874 77


Q ss_pred             EEeCCCcEEEEECCCCeEEEee---cCCCCCeEEEEEccC-CCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        220 SCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISAD-GTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       220 ~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      +++.|+.|++||+.+.+....+   ..|...|.+++|+|+ +.+|++++.|+.|++||+++++..               
T Consensus       177 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~---------------  241 (325)
T d1pgua1         177 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL---------------  241 (325)
T ss_dssp             EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE---------------
T ss_pred             EeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccc---------------
Confidence            8999999999999988766654   457788999999996 678999999999999999988742               


Q ss_pred             ceecccCCceEEEEEc---CCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeE
Q psy17188        296 LDCLQRDNYIRSVKLL---PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCV  372 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i  372 (504)
                      .....|...+..+.|+   +++++|++++.|+.|++||+++++.........+...+..+++.+.+.. .+++++.|+.|
T Consensus       242 ~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~dg~i  320 (325)
T d1pgua1         242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGTL  320 (325)
T ss_dssp             EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT-EEEEEETTSCE
T ss_pred             ccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCC-EEEEEECCCEE
Confidence            1222344444444443   6889999999999999999998865555555555545555555544433 68899999999


Q ss_pred             EEEec
Q psy17188        373 KVWDI  377 (504)
Q Consensus       373 ~i~d~  377 (504)
                      ++||+
T Consensus       321 ~vwdl  325 (325)
T d1pgua1         321 NFYEL  325 (325)
T ss_dssp             EEEET
T ss_pred             EEEEC
Confidence            99995

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-32  Score=246.73  Aligned_cols=281  Identities=14%  Similarity=0.165  Sum_probs=215.8

Q ss_pred             ccceeee-cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCC
Q psy17188        104 ARQINTL-SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  181 (504)
Q Consensus       104 ~~~~~~~-~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  181 (504)
                      .+.++++ +|.++|++++|+|    |++|+ ||+|++||+.++          ...|...|.++++++++ .+++++.|+
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~----------~~~h~~~V~~~~~~~~~-~~~s~s~D~   67 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM----------HQDHSNLIVSLDNSKAQ-EYSSISWDD   67 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE----------ECCCCSCEEEEECCSTT-CCEEEETTT
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC----------CCCCCCCEEEEEecCCC-eEEEEeecc
Confidence            4567777 8999999999997    67777 999999998652          12788999999999765 578899999


Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW  261 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  261 (504)
                      ++++|++...+         ....+.++++++++..++++ .++.+.+|+..+++.+..+.. ...+  .+++++++.++
T Consensus        68 ~v~~w~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~  134 (287)
T d1pgua2          68 TLKVNGITKHE---------FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRL-NSPG--SAVSLSQNYVA  134 (287)
T ss_dssp             EEEETTEEEEE---------CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEEC-SSCE--EEEEECSSEEE
T ss_pred             ccccccccccc---------cccceeeeeeccCCceEEEe-ecccceeeeccceeeeeeccc-ccee--eeeeccCccee
Confidence            99999975321         22346788899888666655 566799999999998888874 3444  35566777888


Q ss_pred             EEcCCC-eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcccee
Q psy17188        262 TGGLDN-TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  340 (504)
Q Consensus       262 s~~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  340 (504)
                      +++.|+ .+++|++...+..              ......+...+.+++|+|++++|++++.||.|++||+.+.+. ...
T Consensus       135 v~~~~~~~v~~~~~~~~~~~--------------~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-~~~  199 (287)
T d1pgua2         135 VGLEEGNTIQVFKLSDLEVS--------------FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-KTS  199 (287)
T ss_dssp             EEETTTSCEEEEETTEEEEE--------------EECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEC
T ss_pred             eeccccceeeeeecccccee--------------eeeeeccCCceeEEEeccCccccccccccccccceeeccccc-ccc
Confidence            777765 7999998765432              111234567799999999999999999999999999987642 233


Q ss_pred             eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEE
Q psy17188        341 ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  420 (504)
Q Consensus       341 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~  420 (504)
                      ....|...+.+++|+|++..                                       ...+.+++.+|++|+.|+.|+
T Consensus       200 ~~~~h~~~v~~~~~~p~~~~---------------------------------------~~~~~~~~~~l~sgs~D~~i~  240 (287)
T d1pgua2         200 RWAFRTSKINAISWKPAEKG---------------------------------------ANEEEIEEDLVATGSLDTNIF  240 (287)
T ss_dssp             CSCCCSSCEEEEEECCCC---------------------------------------------CCSCCEEEEEETTSCEE
T ss_pred             cccccccccceeeecccccc---------------------------------------cccccCCCCeeEeecCCCeEE
Confidence            45667778888888887652                                       333456788999999999999


Q ss_pred             EeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEc
Q psy17188        421 IWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  468 (504)
Q Consensus       421 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~  468 (504)
                      +||++++.. ......+|...|++++|+|++ .|++++.|+.|++|++
T Consensus       241 iw~~~~~~~-~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         241 IYSVKRPMK-IIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEESSCTTC-CEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             EEECCCCCe-EEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            999986543 334556889999999999986 5889999999999996

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9e-32  Score=246.14  Aligned_cols=290  Identities=14%  Similarity=0.129  Sum_probs=213.9

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE---EEeecCCCCCeEEEEEccC-CCEEEEEcCCCeEEE
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---VRQFQGHTDGASCIDISAD-GTKLWTGGLDNTVRS  271 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~~  271 (504)
                      .....+|.+.|++|+|+|++++|++++.||+|+|||++++..   +....+|..+|.+++|+|+ +.+|++|+.|+.|++
T Consensus         4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~   83 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence            445678999999999999999999999999999999876532   2233359999999999986 458999999999999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeee--cc--CCC
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL--TS--SAP  347 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~--~~~  347 (504)
                      |++..+....              .....+........+.++...+++++.++.+++||++..........  ..  ...
T Consensus        84 w~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~  149 (342)
T d1yfqa_          84 VDLIGSPSFQ--------------ALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV  149 (342)
T ss_dssp             ECSSSSSSEE--------------ECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred             eecccccccc--------------cccccccccccccccccccccccccccccccceeeccccccceeeecccccccccc
Confidence            9998776321              11122233344556677888999999999999999865443322221  11  222


Q ss_pred             ceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc-CCCCEEEEeeCCCcEEEeeCCC
Q psy17188        348 ACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       348 ~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      ......+.+++.  .+++++.|+.+++||+............  ......+.+..+. .++..+++++.||.+.+|+...
T Consensus       150 ~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~  225 (342)
T d1yfqa_         150 KNKIFTMDTNSS--RLIVGMNNSQVQWFRLPLCEDDNGTIEE--SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD  225 (342)
T ss_dssp             CCCEEEEEECSS--EEEEEESTTEEEEEESSCCTTCCCEEEE--CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred             eeeeeeeeccCC--ceeeecCCCcEEEEecccCcccceeeee--cccccceeeeEeecCCCCEEEeecCCCeEEEEEecC
Confidence            344555666666  7889999999999999876544333222  2233344555554 4678999999999999999865


Q ss_pred             CCcce-------------eecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCC
Q psy17188        427 PTPRI-------------KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG  493 (504)
Q Consensus       427 ~~~~~-------------~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~  493 (504)
                      .....             ......+...+++++|+|++++||+|+.||.|+|||+++++.+..+..+ ..+..++|+|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~  304 (342)
T d1yfqa_         226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSD  304 (342)
T ss_dssp             TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECS
T ss_pred             CcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCC
Confidence            43211             1123456667899999999999999999999999999999999888643 345668889999


Q ss_pred             CEEEEecCCCC
Q psy17188        494 TKLWTGGLDNT  504 (504)
Q Consensus       494 ~~l~s~s~Dgt  504 (504)
                      ++|++|+.|++
T Consensus       305 ~~l~~a~sdd~  315 (342)
T d1yfqa_         305 NILCLATSDDT  315 (342)
T ss_dssp             SEEEEEEECTH
T ss_pred             CEEEEEEcCCc
Confidence            99999988763

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-32  Score=253.97  Aligned_cols=289  Identities=15%  Similarity=0.218  Sum_probs=205.1

Q ss_pred             eeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE------EEeecCCCCCeEEEEEc---c----CCCEEEEEc
Q psy17188        198 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL------VRQFQGHTDGASCIDIS---A----DGTKLWTGG  264 (504)
Q Consensus       198 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~h~~~v~~~~~~---~----~~~~l~s~~  264 (504)
                      ..++|...|.++++++  +++++++.|++|+|||..+.+.      ......|...+..+...   +    ++.++++++
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~   86 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS   86 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence            4568999999999865  5999999999999999765421      22223355544333221   1    234678999


Q ss_pred             CCCeEEEEECCCCce--EEEeecCCCCCCCcccceecccCCceEEEEEcCC-----CCEEEEEeCCCcEEEEeCCCCCcc
Q psy17188        265 LDNTVRSWDLREGCV--KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-----GRTLIVGGEASNLSIWDLASPTPR  337 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~v~d~~~~~~~  337 (504)
                      .||.|++|++.....  ......       ........+...+..++|.++     +.++++++.||.+++|++......
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~  159 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEK-------LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE  159 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEE-------ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred             CCCcEEEEEccCCCceeeeeccc-------cceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcc
Confidence            999999999764421  000000       001112233455677777764     468899999999999997533210


Q ss_pred             ----------------ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-cccccCCCceEE
Q psy17188        338 ----------------IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-LDCLQRDNYIRS  400 (504)
Q Consensus       338 ----------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~  400 (504)
                                      .......+...+.+++|+|++   ++++++.|+.|++||+++......... .....|...|.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg---~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~  236 (393)
T d1sq9a_         160 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS  236 (393)
T ss_dssp             HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred             cceeeeeeccceecccceecccCCCCcEEEEEECCCC---EEEEEeCCCcEEEEeecccccccccccccccccccceEEE
Confidence                            111122344568899999987   789999999999999987543322221 223468889999


Q ss_pred             EEEcCCCCEEEEeeCCCc---EEEeeCCCCCcceeec-----------ccCCCCceeEEEECCCCCEEEEeeCCCcEEEE
Q psy17188        401 VKLLPDGRTLIVGGEASN---LSIWDLASPTPRIKAE-----------LTSSAPACYALAISPDSKVCFSCCSDGNIAVW  466 (504)
Q Consensus       401 ~~~s~~g~~l~~~~~dg~---i~iwd~~~~~~~~~~~-----------~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iw  466 (504)
                      ++|+|||++|++|+.|+.   |++||+++++......           ..+|...|++++|+||+++|++++.|++|+||
T Consensus       237 l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vW  316 (393)
T d1sq9a_         237 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW  316 (393)
T ss_dssp             EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred             cccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEE
Confidence            999999999999999875   9999999876554432           34788999999999999999999999999999


Q ss_pred             EcCCcceEEEEeecCCceE----EEEEccCCCEEEE
Q psy17188        467 DLHNQTLVRQFQGHTDGAS----CIDISADGTKLWT  498 (504)
Q Consensus       467 d~~~~~~~~~~~~h~~~v~----~~~~s~d~~~l~s  498 (504)
                      |+++++++.++.+|.+.|.    .++|++++..+++
T Consensus       317 d~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~  352 (393)
T d1sq9a_         317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE  352 (393)
T ss_dssp             ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred             ECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEE
Confidence            9999999999999987654    3556666555443

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-31  Score=243.98  Aligned_cols=314  Identities=14%  Similarity=0.154  Sum_probs=225.9

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc-eeeeecCcCceEEEEECCCC-CEEEEEeCCCcEEEEECCC
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI-KAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHN  234 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~  234 (504)
                      +|++.|++|+|+|++++||+|+.||+|+|||++...... .....+|...|.+++|+|++ .+|++|+.|+.|++|++..
T Consensus         9 ~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~   88 (342)
T d1yfqa_           9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccc
Confidence            789999999999999999999999999999997654322 23334699999999999864 5899999999999999998


Q ss_pred             CeEEEeecCCCCCe-EEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        235 QTLVRQFQGHTDGA-SCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       235 ~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      .........+.... ....+.++...+++++.|+++++||++.+.......         ..............+.+.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  159 (342)
T d1yfqa_          89 SPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAV---------KNLNSNNTKVKNKIFTMDTN  159 (342)
T ss_dssp             SSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEE---------EESCSSSSSSCCCEEEEEEC
T ss_pred             ccccccccccccccccccccccccccccccccccccceeeccccccceeee---------cccccccccceeeeeeeecc
Confidence            87766665554443 455566678899999999999999987543211000         01111122333456677888


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCcccee-eeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc-----
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKA-ELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS-----  387 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~-----  387 (504)
                      +..+++++.|+.|++||+......... .............+.+.... .+++++.++.+.+|+...........     
T Consensus       160 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~  238 (342)
T d1yfqa_         160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             CCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCC-EEEeecCCCeEEEEEecCCcceeecccccee
Confidence            899999999999999999876543332 22334445556666554443 78889999999999987543322111     


Q ss_pred             -----ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCc
Q psy17188        388 -----QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN  462 (504)
Q Consensus       388 -----~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~  462 (504)
                           ......+...+++++|+|++++|++|+.||.|++||+++++.+..  +..+ ..+..++|+|++++|++++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~--~~~~-~~~~~~~~s~~~~~l~~a~sdd~  315 (342)
T d1yfqa_         239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN--FAKF-NEDSVVKIACSDNILCLATSDDT  315 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE--CCCC-SSSEEEEEEECSSEEEEEEECTH
T ss_pred             eeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEE--ecCC-CCCEEEEEEeCCCEEEEEEcCCc
Confidence                 111234566789999999999999999999999999998754433  3222 23456788889999999999998


Q ss_pred             EEEEEcCCcceEEEEeecCCceEEE
Q psy17188        463 IAVWDLHNQTLVRQFQGHTDGASCI  487 (504)
Q Consensus       463 i~iwd~~~~~~~~~~~~h~~~v~~~  487 (504)
                      +++|.....    .+..|...|..+
T Consensus       316 ~~~~~~~~~----~~~~~~~~i~~~  336 (342)
T d1yfqa_         316 FKTNAAIDQ----TIELNASSIYII  336 (342)
T ss_dssp             HHHCSSSCT----TSCCCCCEEEEE
T ss_pred             EEEeeeeCC----CccCCCCeEEEE
Confidence            888865332    234455556543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-30  Score=242.33  Aligned_cols=296  Identities=18%  Similarity=0.247  Sum_probs=202.7

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCcee-eeeecCCCCceEEEEEc------c-CCCEEEEecCCC
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVS-QLDCLQRDNYIRSVKLL------P-DGRTLIVGGEAS  181 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s------~-~~~~l~~~~~dg  181 (504)
                      +|.+.|.++++++  +++++++ |++|+|||..+.+...+.. ......|...+..+...      . ++.++++++.||
T Consensus        12 ~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg   89 (393)
T d1sq9a_          12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG   89 (393)
T ss_dssp             CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred             cccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCC
Confidence            8999999999875  5778777 9999999987654433322 22222444444333321      1 345778899999


Q ss_pred             cEEEEeCCCCCccceee--------eecCcCceEEEEECCC-----CCEEEEEeCCCcEEEEECCCC-------------
Q psy17188        182 NLSIWDLASPTPRIKAE--------LTSSAPACYALAISPD-----SKVCFSCCSDGNIAVWDLHNQ-------------  235 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~-----~~~l~~~~~dg~i~iwd~~~~-------------  235 (504)
                      .|++|++..........        ...+...+..++|.++     +.++++++.||.+++|++...             
T Consensus        90 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~  169 (393)
T d1sq9a_          90 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP  169 (393)
T ss_dssp             CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC
T ss_pred             cEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeecc
Confidence            99999986543321111        1224455778888765     458899999999999997532             


Q ss_pred             -----eEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEE
Q psy17188        236 -----TLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  310 (504)
Q Consensus       236 -----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  310 (504)
                           ........+...+.+++|+|++ +|++|+.|++|++||+.+++... ....        ......|...|.+++|
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-~~~~--------~~~l~~h~~~V~~l~~  239 (393)
T d1sq9a_         170 TLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY-NFES--------QHSMINNSNSIRSVKF  239 (393)
T ss_dssp             EEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE-EEEC--------CC---CCCCCEEEEEE
T ss_pred             ceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccc-cccc--------ccccccccceEEEccc
Confidence                 1122223456678999999987 89999999999999999886421 1110        1223467889999999


Q ss_pred             cCCCCEEEEEeCCCc---EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccc
Q psy17188        311 LPDGRTLIVGGEASN---LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVS  387 (504)
Q Consensus       311 ~~~~~~l~~~~~dg~---i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  387 (504)
                      +|+|++|++++.|++   |++||+++++..........                                      ....
T Consensus       240 spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~--------------------------------------~~~~  281 (393)
T d1sq9a_         240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH--------------------------------------SSQA  281 (393)
T ss_dssp             CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------------------------------------------
T ss_pred             ccccceeeeecCCCCcceeeecccccceeeeeeccccc--------------------------------------cccc
Confidence            999999999998874   89999987643221111000                                      0001


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCcee----EEEECCCCCEEEEee
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACY----ALAISPDSKVCFSCC  458 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~----~l~~s~~~~~l~s~~  458 (504)
                      ......|...|++++|+||+++|++++.|++|++||+++++.+  ..+.+|...|.    .++|+|++..+++++
T Consensus       282 ~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~--~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         282 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI--TTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             eeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEE--EEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence            1122358889999999999999999999999999999988544  44566766554    467888887766443

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-31  Score=237.88  Aligned_cols=266  Identities=15%  Similarity=0.183  Sum_probs=205.0

Q ss_pred             cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        194 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      +....+.+|..+|++++|+|    |++|+.||+|++||+.++.     .+|...|.++++++++ .+++++.|+++++|+
T Consensus         4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~   73 (287)
T d1pgua2           4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNG   73 (287)
T ss_dssp             EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTT-CCEEEETTTEEEETT
T ss_pred             ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCC-eEEEEeecccccccc
Confidence            45678999999999999987    8999999999999987643     5799999999998764 689999999999998


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEE
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALA  353 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~  353 (504)
                      +...+                      ....+..+.+++++..++++ .++.+.+|+..+.+....  .... ..  ..+
T Consensus        74 ~~~~~----------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~-~~--~~~  125 (287)
T d1pgua2          74 ITKHE----------------------FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKS--VRLN-SP--GSA  125 (287)
T ss_dssp             EEEEE----------------------CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEE--EECS-SC--EEE
T ss_pred             ccccc----------------------cccceeeeeeccCCceEEEe-ecccceeeeccceeeeee--cccc-ce--eee
Confidence            75432                      22346778889888777665 556788898877653332  2222 22  345


Q ss_pred             ECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        354 ISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      +++++.. +++.+..++.+++|++......    ......+...+++++|+|++.+|++++.||.|++||+.+++.. ..
T Consensus       126 ~~~~~~~-~~v~~~~~~~v~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~-~~  199 (287)
T d1pgua2         126 VSLSQNY-VAVGLEEGNTIQVFKLSDLEVS----FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-TS  199 (287)
T ss_dssp             EEECSSE-EEEEETTTSCEEEEETTEEEEE----EECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EC
T ss_pred             eeccCcc-eeeeccccceeeeeecccccee----eeeeeccCCceeEEEeccCccccccccccccccceeecccccc-cc
Confidence            5666652 3444444568999998643211    1112245678999999999999999999999999999876532 33


Q ss_pred             cccCCCCceeEEEECCC----------CCEEEEeeCCCcEEEEEcCC-cceEEEEeecCCceEEEEEccCCCEEEEecCC
Q psy17188        434 ELTSSAPACYALAISPD----------SKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~----------~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      ....|...|++++|+|+          +.+|++|+.|++|+|||+++ ++.+..+.+|.+.|++++|+|++ .|+++|.|
T Consensus       200 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D  278 (287)
T d1pgua2         200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGAD  278 (287)
T ss_dssp             CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETT
T ss_pred             cccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECC
Confidence            45678889999999874          56899999999999999977 55677778999999999999986 68999999


Q ss_pred             CC
Q psy17188        503 NT  504 (504)
Q Consensus       503 gt  504 (504)
                      |+
T Consensus       279 ~~  280 (287)
T d1pgua2         279 AC  280 (287)
T ss_dssp             SC
T ss_pred             Ce
Confidence            86

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2e-30  Score=244.97  Aligned_cols=357  Identities=10%  Similarity=0.071  Sum_probs=246.7

Q ss_pred             CcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee---e
Q psy17188        125 TKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---T  200 (504)
Q Consensus       125 ~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~  200 (504)
                      +.++++.. ||+|+|||+.+++.   +..+.  .+ ..+..++|||||++|++++.|++|++||+.+++......+   .
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~---~~~l~--~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~  105 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKI---VKVID--TG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI  105 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSE---EEEEE--CC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred             eEEEEEEcCCCEEEEEECCCCcE---EEEEe--CC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC
Confidence            33556666 89999999988633   33333  23 4689999999999999999999999999998875443333   3


Q ss_pred             cCcCceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC-EEEEEcCCCeEEEEECC-CC
Q psy17188        201 SSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT-KLWTGGLDNTVRSWDLR-EG  277 (504)
Q Consensus       201 ~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~-~~  277 (504)
                      +|...+.+++|+|||++++++ ..++.+.+||..+++++..+..|...+....+.+++. ..+..+.|+...++... ++
T Consensus       106 ~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~  185 (426)
T d1hzua2         106 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  185 (426)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCC
Confidence            566667788889999987554 5789999999999999998888777776666766655 33455555555444433 33


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISP  356 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~  356 (504)
                      .+..+......    ........+...+..+.++|++++++++.. +..+.+++..+.+..................+..
T Consensus       186 ~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (426)
T d1hzua2         186 KVLLVNYKDID----NLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH  261 (426)
T ss_dssp             EEEEEECSSSS----SCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEE
T ss_pred             eEEEEEecccc----ceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeec
Confidence            33332222111    012233456777899999999998887764 5568899998876555544444444444444444


Q ss_pred             CCCC-ceeeeccCCCeEEEEecCCCCCCCc--ccccccccCCCceEEEEEcCCCCEEEE-------eeCCCcEEEeeCCC
Q psy17188        357 DSKS-PFFSSHHYKSCVKVWDISQPGSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIV-------GGEASNLSIWDLAS  426 (504)
Q Consensus       357 ~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~-------~~~dg~i~iwd~~~  426 (504)
                      .+.. ...+....++.+.+|+.........  ........|...+..++|+||+++|++       +..+++|++||+++
T Consensus       262 ~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t  341 (426)
T d1hzua2         262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN  341 (426)
T ss_dssp             TTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred             CCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCC
Confidence            4332 2334556788899998765432211  112233457778899999999999995       44578999999998


Q ss_pred             CCcceee-------cccCCCCceeEEEECCCCCEEEEe-----eCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCC
Q psy17188        427 PTPRIKA-------ELTSSAPACYALAISPDSKVCFSC-----CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  494 (504)
Q Consensus       427 ~~~~~~~-------~~~~~~~~v~~l~~s~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~  494 (504)
                      ++.....       .+..+...|..++|||||++++..     +.++.|+|||.+++++...+.++.      .++|+|+
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~------~~tp~Gk  415 (426)
T d1hzua2         342 LDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR------LITPTGK  415 (426)
T ss_dssp             TTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT------CCSEEEE
T ss_pred             CCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC------ccCCCce
Confidence            7754432       234556678999999999977532     357889999999999999998764      3467777


Q ss_pred             EEE
Q psy17188        495 KLW  497 (504)
Q Consensus       495 ~l~  497 (504)
                      +.+
T Consensus       416 ~~~  418 (426)
T d1hzua2         416 FNV  418 (426)
T ss_dssp             EEH
T ss_pred             EeE
Confidence            643

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6e-30  Score=228.67  Aligned_cols=271  Identities=22%  Similarity=0.356  Sum_probs=210.1

Q ss_pred             eeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECC
Q psy17188        196 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLR  275 (504)
Q Consensus       196 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~  275 (504)
                      ......|...|+|++|  |+++|++|+.||+|+|||+.+++++.++++|.+.|.+++|  ++++|++++.|+.|++|++.
T Consensus         8 i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~   83 (293)
T d1p22a2           8 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN   83 (293)
T ss_dssp             EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred             EeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccc
Confidence            3345567788998765  7889999999999999999999999999999999999887  57799999999999999999


Q ss_pred             CCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc-ceeeeccCCCceeeEEE
Q psy17188        276 EGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR-IKAELTSSAPACYALAI  354 (504)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-~~~~~~~~~~~i~~~~~  354 (504)
                      .+.....                .. ........+.+....++++..++.+.+|+....... .......+...+..+.+
T Consensus        84 ~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  146 (293)
T d1p22a2          84 TGEMLNT----------------LI-HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF  146 (293)
T ss_dssp             SCCEEEE----------------EC-CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred             ccccccc----------------cc-ccccccccccccccceeecccccceeEeecccccccccccccccccccccccee
Confidence            8864321                11 111233445566778999999999999999876533 33445566777777777


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeec
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~  434 (504)
                      .++    .+.+++.|+.+++||.+......     ....+...+..+.++  +.++++++.||.|++||+++.....  .
T Consensus       147 ~~~----~~~~~s~d~~i~~~d~~~~~~~~-----~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~--~  213 (293)
T d1p22a2         147 DDK----YIVSASGDRTIKVWNTSTCEFVR-----TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR--V  213 (293)
T ss_dssp             ETT----EEEEEETTSEEEEEETTTCCEEE-----EEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEE--E
T ss_pred             ccc----ccccccCCCceeeecCCCCcEEE-----EEcccccccccccCC--CCeEEEecCCCEEEEEecccceeee--e
Confidence            655    67788899999999998654322     122455566666665  5689999999999999999775543  3


Q ss_pred             ccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC---------cceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        435 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------QTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       435 ~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      ...+...+.  .+++++.+|++++.||.|++||+.+         ..++..+.+|.+.|++++|  |+++|+|+|.||+
T Consensus       214 ~~~~~~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~  288 (293)
T d1p22a2         214 LEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT  288 (293)
T ss_dssp             ECCCSSCEE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSE
T ss_pred             ecccceeee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCE
Confidence            445555564  4667889999999999999999743         3467888999999999999  4678999999985

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.98  E-value=4e-32  Score=251.00  Aligned_cols=328  Identities=12%  Similarity=0.110  Sum_probs=233.4

Q ss_pred             ceEEEECC-CCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-C--CeEEEEeCCCCCCCCc
Q psy17188         74 AYSYHVTT-DGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-K--GCVKVWDISQPGSKTP  149 (504)
Q Consensus        74 v~~~~~s~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d--~~i~vw~~~~~~~~~~  149 (504)
                      .+.-.||| ||+.+++... +.+++|+..  ...+..++|...|.+++|+|||++|++++ +  ..|++||.+++..   
T Consensus         5 ~~~~~fSP~dG~~~a~~~~-g~v~v~d~~--~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~---   78 (360)
T d1k32a3           5 KFAEDFSPLDGDLIAFVSR-GQAFIQDVS--GTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA---   78 (360)
T ss_dssp             GGEEEEEECGGGCEEEEET-TEEEEECTT--SSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE---
T ss_pred             hhcccccCCCCCEEEEEEC-CeEEEEECC--CCcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE---
Confidence            45677898 8988877665 456666553  34455678999999999999999998765 4  3799999987531   


Q ss_pred             eeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-------
Q psy17188        150 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------  222 (504)
Q Consensus       150 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------  222 (504)
                         .....|...|.+++|+||+++|++++.++.+++|++.+++.  ...+..|...+.+++|+|||++|+.+.       
T Consensus        79 ---~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~  153 (360)
T d1k32a3          79 ---EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGET  153 (360)
T ss_dssp             ---EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred             ---EEeeCCCceEEeeeecccccccceeccccccccccccccce--eeeeecccccccchhhccceeeeeeeccccccce
Confidence               22337899999999999999999999999999999987664  556677888899999999999998654       


Q ss_pred             ---CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec
Q psy17188        223 ---SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL  299 (504)
Q Consensus       223 ---~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (504)
                         .++.+++||+.+++...... +...+..+.|+|||++|++++.|+.+.+|+........-.        ........
T Consensus       154 ~~~~~~~~~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~--------~~~~~~~~  224 (360)
T d1k32a3         154 DGYVMQAIHVYDMEGRKIFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV--------VSKPFVIP  224 (360)
T ss_dssp             CSCCEEEEEEEETTTTEEEECSC-SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS--------CBEEEEEE
T ss_pred             eeccccceeeeccccCceeeecc-cccccccccccCCCCEEEEEeCCCceEcccccccceeecc--------ccceEEEe
Confidence               34569999999988765554 7788899999999999999999999999998765431100        00011111


Q ss_pred             ccCCceEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC-ceeeeccCCCeEE
Q psy17188        300 QRDNYIRSVKLLPDGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS-PFFSSHHYKSCVK  373 (504)
Q Consensus       300 ~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~i~  373 (504)
                      .+...+..+.+++++..+..+..+.     .+..++...+.   ...+..+...+..+.+...+.. .++++++.++.++
T Consensus       225 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  301 (360)
T d1k32a3         225 LIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD---YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL  301 (360)
T ss_dssp             SSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBC---EEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEE
T ss_pred             cccCccccceECCCcCcccccceeecccccceeecccCcCc---eeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEE
Confidence            2233334455666666555443321     13333333322   2223333445555555555442 2567788899999


Q ss_pred             EEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceee
Q psy17188        374 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA  433 (504)
Q Consensus       374 i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~  433 (504)
                      +||+...+.         ..+...|..++|+|||++|++++.||.|++||+++++.....
T Consensus       302 ~~d~~~~~~---------~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~  352 (360)
T d1k32a3         302 KYDVKTRKV---------TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV  352 (360)
T ss_dssp             EEETTTCCE---------EEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEEC
T ss_pred             EEECCCCeE---------EEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence            999876421         123456889999999999999999999999999987654433

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-29  Score=227.20  Aligned_cols=274  Identities=16%  Similarity=0.319  Sum_probs=211.5

Q ss_pred             CCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Q psy17188        157 QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  236 (504)
Q Consensus       157 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~  236 (504)
                      .|...|+|++|  |+++||+|+.||+|+|||+.+++  ....+.+|...|++++|  ++++|++++.|+.|++|++..+.
T Consensus        13 ~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~--~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~   86 (293)
T d1p22a2          13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE   86 (293)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             CCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--EEEEEecCCCCEeeeec--ccceeeccccccccccccccccc
Confidence            57788998765  79999999999999999998765  46778899999999987  56799999999999999999998


Q ss_pred             EEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCE
Q psy17188        237 LVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  316 (504)
Q Consensus       237 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  316 (504)
                      .......+.....  .+.+....++++..++.+++|+.........            ......+...+..+.+.  ...
T Consensus        87 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~v~~~~~~--~~~  150 (293)
T d1p22a2          87 MLNTLIHHCEAVL--HLRFNNGMMVTCSKDRSIAVWDMASPTDITL------------RRVLVGHRAAVNVVDFD--DKY  150 (293)
T ss_dssp             EEEEECCCCSCEE--EEECCTTEEEEEETTSCEEEEECSSSSCCEE------------EEEECCCSSCEEEEEEE--TTE
T ss_pred             ccccccccccccc--cccccccceeecccccceeEeeccccccccc------------cccccccccccccceec--ccc
Confidence            8877765544433  3445566899999999999999987652211            22334456667666665  457


Q ss_pred             EEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCC
Q psy17188        317 LIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDN  396 (504)
Q Consensus       317 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~  396 (504)
                      +++++.|+.+++||.++.+  ....+..+...+..+.+++.    .+++++.|+.|++||++......     ....+..
T Consensus       151 ~~~~s~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~  219 (293)
T d1p22a2         151 IVSASGDRTIKVWNTSTCE--FVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRLWDIECGACLR-----VLEGHEE  219 (293)
T ss_dssp             EEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEETT----EEEEEETTSCEEEEETTTCCEEE-----EECCCSS
T ss_pred             cccccCCCceeeecCCCCc--EEEEEcccccccccccCCCC----eEEEecCCCEEEEEecccceeee-----eecccce
Confidence            8889999999999998874  45556677777777777643    78999999999999998653221     1223444


Q ss_pred             ceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCC-------cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        397 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPT-------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       397 ~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      .+.  .+++++.+|++++.||.|++||+....       ......+.+|...|++++|  ++++|++++.||+|+|||
T Consensus       220 ~v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         220 LVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CEE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred             eee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence            444  466788999999999999999975322       2234556788999999999  467899999999999997

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.97  E-value=7e-29  Score=233.51  Aligned_cols=333  Identities=14%  Similarity=0.075  Sum_probs=237.7

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee---ec
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL---TS  201 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~  201 (504)
                      -++++.+ +|+|.|||.++++...   .+.  .+ ..+..++|||||++|++++.|+.|.+||+.+++......+   ..
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~---~~~--~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~  106 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKT---VLD--TG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE  106 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEE---EEE--CS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEE---EEe--CC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC
Confidence            3445666 8999999998864433   332  23 3599999999999999999999999999988765444333   34


Q ss_pred             CcCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEeecCC-----------CCCeEEEEEccCCCEE-EEEcCCCe
Q psy17188        202 SAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQGH-----------TDGASCIDISADGTKL-WTGGLDNT  268 (504)
Q Consensus       202 ~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~~~l-~s~~~dg~  268 (504)
                      |...+.+..|+|||++| ++++.++.|++||..+++.+..+..|           ......+.++|++..+ ++...++.
T Consensus       107 ~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~  186 (432)
T d1qksa2         107 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK  186 (432)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred             CCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCe
Confidence            55566777888999976 67888999999999999988877543           3456678889988765 56677899


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeec---c
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELT---S  344 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~---~  344 (504)
                      |.+||..+.+..              ..........+..++|+|+|+++++++. ++.+.++|..+.+........   .
T Consensus       187 i~~~d~~~~~~~--------------~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~  252 (432)
T d1qksa2         187 ILLVDYTDLNNL--------------KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP  252 (432)
T ss_dssp             EEEEETTCSSEE--------------EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred             EEEEEccCCCcc--------------eEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCcccc
Confidence            999998876532              1222334566889999999998877765 457888898876433322221   1


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeC
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  424 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~  424 (504)
                      +........+...+. ........++.+.+|+......         ..+...+....++|++..+++++.++..++|+.
T Consensus       253 ~~~~~~~~~~~~~g~-~~~~~~lg~~~v~~~~~~~~~~---------~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~  322 (432)
T d1qksa2         253 HPGRGANFVHPTFGP-VWATSHMGDDSVALIGTDPEGH---------PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD  322 (432)
T ss_dssp             CCTTCEEEEETTTEE-EEEEEBSSSSEEEEEECCTTTC---------TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE
T ss_pred             ccCcccceecCCCCc-eecccccCCceEEecccccccc---------cccccEEEEEEEcCCCCeEEEEecCCccceeec
Confidence            222333334433333 1233334578899998654321         234556889999999999999999999999986


Q ss_pred             CCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCceEEEEEccCCCEEEEec
Q psy17188        425 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       425 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      .+...        +......+++ ||++.|++++.|+.+++|++.++..+   ..|...+.+++|||||++++.+.
T Consensus       323 ~~~~~--------~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l---~~~~~~v~~~~fS~DG~~v~~S~  386 (432)
T d1qksa2         323 ATLNP--------EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGI---TEGQPRVVQGEFNKDGTEVWFSV  386 (432)
T ss_dssp             CTTCS--------SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTC---CSSCCEEEEEEECTTSSEEEEEE
T ss_pred             ccCCC--------CCCeeeEEEE-EechhhcccccCCceEeccccccccc---CCCCCcEEEeEECCCCCEEEEEE
Confidence            64322        2222233455 89999999999999999998766433   35777899999999999886654

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=3.8e-28  Score=228.44  Aligned_cols=362  Identities=11%  Similarity=0.023  Sum_probs=248.4

Q ss_pred             cceEEEECCCCCcccCCCCCCcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCcee
Q psy17188         73 PAYSYHVTTDGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVS  151 (504)
Q Consensus        73 ~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~  151 (504)
                      .+..+..+++|++..+..           ...+.+..+.....+..++|||||+++++++ |+.|++||+.+++......
T Consensus        32 ~~~~v~~~d~g~v~v~D~-----------~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~  100 (432)
T d1qksa2          32 NLFSVTLRDAGQIALIDG-----------STYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE  100 (432)
T ss_dssp             GEEEEEETTTTEEEEEET-----------TTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred             cEEEEEEcCCCEEEEEEC-----------CCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEE
Confidence            345566666665443333           3345556664445799999999999999887 9999999998865333222


Q ss_pred             eeeecCCCCceEEEEEccCCCEE-EEecCCCcEEEEeCCCCCccceeee---------ecCcCceEEEEECCCCCEE-EE
Q psy17188        152 QLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAEL---------TSSAPACYALAISPDSKVC-FS  220 (504)
Q Consensus       152 ~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l-~~  220 (504)
                      ......|.+.+.+..|+|||++| +++..++.|++||..+++.......         ..+......+.+++++..+ ++
T Consensus       101 i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs  180 (432)
T d1qksa2         101 IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN  180 (432)
T ss_dssp             EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             EecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEE
Confidence            22223456667777889999987 6677899999999998764322211         1244556788999999865 45


Q ss_pred             EeCCCcEEEEECCCCeEEEeec-CCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        221 CCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       221 ~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                      ...++.|.+||..+.+...... .+...+.+++|+|+|+++++++. ++.+.++|..+++.... ..         ....
T Consensus       181 ~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~-~~---------~g~~  250 (432)
T d1qksa2         181 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-ED---------TGGQ  250 (432)
T ss_dssp             ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EE---------CSSS
T ss_pred             EccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEE-ec---------cCcc
Confidence            5667899999998876543322 25667899999999998776664 56899999988764321 11         1111


Q ss_pred             cccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..+........+...+....+.. .++.+.+|+.....      ...+...+....+++++.  .+++++.+...++|+.
T Consensus       251 ~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~------~~~~~~~v~~~~~~~~g~--~~~~~s~p~~~~lw~~  322 (432)
T d1qksa2         251 TPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG------HPDNAWKILDSFPALGGG--SLFIKTHPNSQYLYVD  322 (432)
T ss_dssp             SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT------CTTTBTSEEEEEECSCSC--CCCEECCTTCSEEEEE
T ss_pred             ccccCcccceecCCCCceecccccCCceEEeccccccc------ccccccEEEEEEEcCCCC--eEEEEecCCccceeec
Confidence            12233344455555554444443 37789999865542      234555788888999887  5777778889999986


Q ss_pred             CCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        378 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      .....           +......+++ ||++.+++++.|+.+++|++.++.     .+..+...+.+++|+|||++|+.+
T Consensus       323 ~~~~~-----------~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~-----~l~~~~~~v~~~~fS~DG~~v~~S  385 (432)
T d1qksa2         323 ATLNP-----------EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA-----GITEGQPRVVQGEFNKDGTEVWFS  385 (432)
T ss_dssp             CTTCS-----------SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH-----TCCSSCCEEEEEEECTTSSEEEEE
T ss_pred             ccCCC-----------CCCeeeEEEE-EechhhcccccCCceEeccccccc-----ccCCCCCcEEEeEECCCCCEEEEE
Confidence            54321           1111224555 899999999999999999975432     223455678899999999988655


Q ss_pred             e-----CCCcEEEEEcCCcceEEEEeec
Q psy17188        458 C-----SDGNIAVWDLHNQTLVRQFQGH  480 (504)
Q Consensus       458 ~-----~dg~i~iwd~~~~~~~~~~~~h  480 (504)
                      .     .+|.|.|||.+++++...+++.
T Consensus       386 ~~~~~~~~g~i~i~D~~T~k~~~~i~~~  413 (432)
T d1qksa2         386 VWNGKDQESALVVVDDKTLELKHVIKDE  413 (432)
T ss_dssp             EECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             EecCCCCCCcEEEEECCCceEEeEecCC
Confidence            3     4688999999999998888753

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=8.3e-26  Score=213.01  Aligned_cols=315  Identities=11%  Similarity=0.045  Sum_probs=211.7

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--ee---cCCCC
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QF---QGHTD  246 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~---~~h~~  246 (504)
                      -++++.+.||+|+|||+.+++.  ...+..+. .+..++|+|||++|++++.|++|++||+.+++...  .+   .+|.+
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~--~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~  109 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKI--VKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS  109 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSE--EEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcE--EEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcc
Confidence            3567788999999999998764  45566654 58999999999999999999999999999886432  22   34666


Q ss_pred             CeEEEEEccCCCEEEE-EcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CC
Q psy17188        247 GASCIDISADGTKLWT-GGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-AS  324 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s-~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg  324 (504)
                      .+.+++|+|||+++++ +..++.+++||..++++...........    .............+..++++..++.... .+
T Consensus       110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~  185 (426)
T d1hzua2         110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV----DTQTYHPEPRVAAIIASHEHPEFIVNVKETG  185 (426)
T ss_dssp             EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS----SSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             eEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCc----cceeecCCCceeEEEECCCCCEEEEecCCCC
Confidence            6777788899998754 5588999999999987543321111000    1112234455677888898888777654 45


Q ss_pred             cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      .+.+++....... ......+...+..+.++|+++. ++++...+..+.+++............   ...........+.
T Consensus       186 ~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  260 (426)
T d1hzua2         186 KVLLVNYKDIDNL-TVTSIGAAPFLADGGWDSSHRY-FMTAANNSNKVAVIDSKDRRLSALVDV---GKTPHPGRGANFV  260 (426)
T ss_dssp             EEEEEECSSSSSC-EEEEEECCSSEEEEEECTTSCE-EEEEETTCSEEEEEETTTTEEEEEEEC---SSCCCCSCCEEEE
T ss_pred             eEEEEEeccccce-eeEEeccCCccEeeeECCCCcE-EEeeeecccceeeeecccccEEEEecc---CCcccccceeeee
Confidence            6667766654332 2333445668889999999986 556666778899999876532221111   1111111122222


Q ss_pred             CCCC-EE--EEeeCCCcEEEeeCCCCC-----cceeecccCCCCceeEEEECCCCCEEEE-------eeCCCcEEEEEcC
Q psy17188        405 PDGR-TL--IVGGEASNLSIWDLASPT-----PRIKAELTSSAPACYALAISPDSKVCFS-------CCSDGNIAVWDLH  469 (504)
Q Consensus       405 ~~g~-~l--~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~s~~~~~l~s-------~~~dg~i~iwd~~  469 (504)
                      .++. .+  +....|+.+.+|+.....     ......+.+|...+..++|+||+++|++       ++.|++|+|||++
T Consensus       261 ~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~  340 (426)
T d1hzua2         261 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  340 (426)
T ss_dssp             ETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             cCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECC
Confidence            2221 11  223346667676654321     1234456678888999999999999995       4567899999999


Q ss_pred             CcceEEEEe---------ecCCceEEEEEccCCCEEEE
Q psy17188        470 NQTLVRQFQ---------GHTDGASCIDISADGTKLWT  498 (504)
Q Consensus       470 ~~~~~~~~~---------~h~~~v~~~~~s~d~~~l~s  498 (504)
                      +++...++.         .|...|.+++|||||++++.
T Consensus       341 t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~v  378 (426)
T d1hzua2         341 NLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF  378 (426)
T ss_dssp             CTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEE
T ss_pred             CCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEE
Confidence            998776553         34556999999999998754

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.94  E-value=1.4e-23  Score=187.92  Aligned_cols=272  Identities=17%  Similarity=0.268  Sum_probs=202.1

Q ss_pred             EEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEE
Q psy17188        175 IVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI  253 (504)
Q Consensus       175 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  253 (504)
                      ++.+.|++|.+||+++++.  ...+... ..+..++|+|||++|+ +++.++.|++||+.+++.+..+..+. .+..+.|
T Consensus         6 V~~~~~~~v~v~D~~t~~~--~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~   81 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKV--TATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV   81 (301)
T ss_dssp             EEETTTTEEEEEETTTTEE--EEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE
T ss_pred             EEECCCCEEEEEECCCCeE--EEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccccccc
Confidence            4567889999999998764  3334332 3468899999999775 66678999999999999999998665 5689999


Q ss_pred             ccCCCEE-EEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeC
Q psy17188        254 SADGTKL-WTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDL  331 (504)
Q Consensus       254 ~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~  331 (504)
                      ++++..+ +++..++.+.+|+..+++.                ............+.++|+++.+++. ..++.+.+|+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~  145 (301)
T d1l0qa2          82 SPDGKQVYVTNMASSTLSVIDTTSNTV----------------AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINT  145 (301)
T ss_dssp             CTTSSEEEEEETTTTEEEEEETTTTEE----------------EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ccccccccccccccceeeeccccccee----------------eeeccccccceEEEeecCCCeeeeeeccccceeeeec
Confidence            9998855 4566778999999998873                3333455667899999999987654 55778999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      .+.....  .... ...+..+++++++.. ++++....+.+.+|+......      .........+..++++++++.++
T Consensus       146 ~~~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~  215 (301)
T d1l0qa2         146 VTKAVIN--TVSV-GRSPKGIAVTPDGTK-VYVANFDSMSISVIDTVTNSV------IDTVKVEAAPSGIAVNPEGTKAY  215 (301)
T ss_dssp             TTTEEEE--EEEC-CSSEEEEEECTTSSE-EEEEETTTTEEEEEETTTTEE------EEEEECSSEEEEEEECTTSSEEE
T ss_pred             cccceee--eccc-CCCceEEEeeccccc-eeeecccccccccccccceee------eecccccCCcceeeccccccccc
Confidence            8764332  2222 336788999999885 444555567788887665321      11223345577899999999887


Q ss_pred             EeeC---CCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE-EEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        412 VGGE---ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       412 ~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      ++..   ++.|++||+.+++.......   ...+..++|+|||++| ++++.|+.|++||+++++++.++.-
T Consensus       216 v~~~~~~~~~v~v~D~~t~~~~~~~~~---~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         216 VTNVDKYFNTVSMIDTGTNKITARIPV---GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             EEEECSSCCEEEEEETTTTEEEEEEEC---CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             cccccceeeeeeeeecCCCeEEEEEcC---CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence            6643   46799999998765443332   2347899999999987 5677899999999999999988863

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=1.1e-24  Score=198.46  Aligned_cols=279  Identities=14%  Similarity=0.144  Sum_probs=200.4

Q ss_pred             CEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeecCCCC----
Q psy17188        172 RTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTD----  246 (504)
Q Consensus       172 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~----  246 (504)
                      +++++++.|++|.+||+++.+.........+...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..+..    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            589999999999999999876543334444555678999999999874 667889999999999999988876543    


Q ss_pred             -CeEEEEEccCCCEEEEEc------------CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        247 -GASCIDISADGTKLWTGG------------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       247 -~v~~~~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                       .+..++|+|++++++++.            .+..+.+||..+++.                .........+..++|+|+
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----------------~~~~~~~~~~~~~~~s~d  145 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR----------------RKAFEAPRQITMLAWARD  145 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE----------------EEEEECCSSCCCEEECTT
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeE----------------EEeccccCCceEEEEcCC
Confidence             345789999999988776            356788888888763                222334556788999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCC----------------------ceeeeccCCCe
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKS----------------------PFFSSHHYKSC  371 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~~~  371 (504)
                      |+++++++.  .+.+||..+.+.........   ......+.+++..                      ........++.
T Consensus       146 g~~l~~~~~--~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (337)
T d1pbyb_         146 GSKLYGLGR--DLHVMDPEAGTLVEDKPIQS---WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG  220 (337)
T ss_dssp             SSCEEEESS--SEEEEETTTTEEEEEECSTT---TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred             CCEEEEEcC--CcceeeeecCcEEEEeecCC---ccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCcc
Confidence            999999865  47789988764322222111   1111111222111                      02233444566


Q ss_pred             EEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCC
Q psy17188        372 VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  451 (504)
Q Consensus       372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~  451 (504)
                      +.+|+......    .......+...+..++++|++.+++.+  ++.|++||+.+++.......   ...+.+++|+|||
T Consensus       221 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dG  291 (337)
T d1pbyb_         221 LLTMDLETGEM----AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---PHSYYSVNVSTDG  291 (337)
T ss_dssp             EEEEETTTCCE----EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEECTTS
T ss_pred             EEEEEcCCCcE----EEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcC---CCCEEEEEECCCC
Confidence            88888765421    222233456678889999999988776  58899999998876555443   3457889999999


Q ss_pred             CEEEEeeCCCcEEEEEcCCcceEEEEeec
Q psy17188        452 KVCFSCCSDGNIAVWDLHNQTLVRQFQGH  480 (504)
Q Consensus       452 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h  480 (504)
                      ++|++++.|+.|+|||.++++.+.+++..
T Consensus       292 ~~l~v~~~~~~i~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         292 STVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             CEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             CEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence            99999999999999999999999988743

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.93  E-value=9.8e-23  Score=182.37  Aligned_cols=269  Identities=17%  Similarity=0.276  Sum_probs=196.7

Q ss_pred             ecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccceeeeecCcCceEEE
Q psy17188        131 GGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTSSAPACYAL  209 (504)
Q Consensus       131 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~  209 (504)
                      ..|++|.+||+++++   .+..+   .....+..++|+|||++|+ +++.++.|++||+.+++.  ...+..+. .+..+
T Consensus         9 ~~~~~v~v~D~~t~~---~~~~i---~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~--~~~~~~~~-~~~~~   79 (301)
T d1l0qa2           9 SESDNISVIDVTSNK---VTATI---PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--IATVPAGS-SPQGV   79 (301)
T ss_dssp             TTTTEEEEEETTTTE---EEEEE---ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--EEEEECSS-SEEEE
T ss_pred             CCCCEEEEEECCCCe---EEEEE---ECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCce--eeeeeccc-ccccc
Confidence            349999999998863   22222   2345678999999999885 566789999999987654  44455554 46889


Q ss_pred             EECCCCCEEEE-EeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCC
Q psy17188        210 AISPDSKVCFS-CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQP  287 (504)
Q Consensus       210 ~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~  287 (504)
                      +|++++..+++ +..++.+.+|+..+++....+. +.....++.++|+++.++ ++..++.+.+|+..++..        
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~--------  150 (301)
T d1l0qa2          80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--------  150 (301)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--------
T ss_pred             ccccccccccccccccceeeecccccceeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccce--------
Confidence            99999986554 5567789999999999998888 455678899999998764 566788999999998873        


Q ss_pred             CCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeec
Q psy17188        288 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSH  366 (504)
Q Consensus       288 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  366 (504)
                              .........+..+.++|+++.++++..+ +.+.+|+....+  .. ........+..+++++++...+++..
T Consensus       151 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~g~~~~v~~~  219 (301)
T d1l0qa2         151 --------INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS--VI-DTVKVEAAPSGIAVNPEGTKAYVTNV  219 (301)
T ss_dssp             --------EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EE-EEEECSSEEEEEEECTTSSEEEEEEE
T ss_pred             --------eeecccCCCceEEEeeccccceeeeccccccccccccccee--ee-ecccccCCcceeeccccccccccccc
Confidence                    2333445567899999999988888765 556677766542  22 22223346788999999996444433


Q ss_pred             -cCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE-EEeeCCCcEEEeeCCCCCcceeec
Q psy17188        367 -HYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEASNLSIWDLASPTPRIKAE  434 (504)
Q Consensus       367 -~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~~~~dg~i~iwd~~~~~~~~~~~  434 (504)
                       ..++.|.+||..+.+...      .......+..++|+|||++| ++++.++.|++||+++++.+....
T Consensus       220 ~~~~~~v~v~D~~t~~~~~------~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         220 DKYFNTVSMIDTGTNKITA------RIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             CSSCCEEEEEETTTTEEEE------EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             cceeeeeeeeecCCCeEEE------EEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence             445789999987653221      12334568899999999987 466778999999999886655443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=8.3e-25  Score=200.16  Aligned_cols=312  Identities=15%  Similarity=0.151  Sum_probs=210.8

Q ss_pred             EEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccce
Q psy17188        119 VTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIK  196 (504)
Q Consensus       119 v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~  196 (504)
                      ++|+++++++++++ |++|.+||+++++   .+..+. ..+...+.+++|+|||++++ ++..++.|++||+.+++....
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~---~~~t~~-~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~   77 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDT---VYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH   77 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTE---EEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCC---EEEEEE-cCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeee
Confidence            47899999999988 9999999998852   233222 24566788999999999875 556789999999998754322


Q ss_pred             eeeec----CcCceEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEeecCC--CCCeEEEEEccCCC
Q psy17188        197 AELTS----SAPACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQGH--TDGASCIDISADGT  258 (504)
Q Consensus       197 ~~~~~----~~~~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~  258 (504)
                      .....    +...+..++|+|||+++++++            .+..+.+|+..+++....+..+  ...+..+.+++++.
T Consensus        78 ~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (346)
T d1jmxb_          78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS  157 (346)
T ss_dssp             EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred             ecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCE
Confidence            22211    112345789999999888765            4677899998887655444322  34456667777776


Q ss_pred             EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCcc
Q psy17188        259 KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPR  337 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~  337 (504)
                      .++++   +.+.+|++.+++..                ...........+.++|++..++... .++.+.+++...    
T Consensus       158 ~~~~~---~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  214 (346)
T d1jmxb_         158 LYVAG---PDIYKMDVKTGKYT----------------VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIA----  214 (346)
T ss_dssp             EEEES---SSEEEECTTTCCEE----------------EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEE----
T ss_pred             EEEeC---CcceEEEccCCCEE----------------EEEecCCCccceEEeccccEEEEEecCCCceEeeeeee----
Confidence            55543   45889998887632                2222233345566777776655443 334444443211    


Q ss_pred             ceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC
Q psy17188        338 IKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  417 (504)
Q Consensus       338 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg  417 (504)
                                     ...+...  .+.+...+..+.+|+.......    ......+...+..+.+++++.+++... ++
T Consensus       215 ---------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  272 (346)
T d1jmxb_         215 ---------------RFKDDKQ--DPATADLLYGYLSVDLKTGKTH----TQEFADLTELYFTGLRSPKDPNQIYGV-LN  272 (346)
T ss_dssp             ---------------EC---------CCCEEEEEEEEEETTTCCEE----EEEEEECSSCEEEEEECSSCTTEEEEE-ES
T ss_pred             ---------------eeccCce--eEeeccCCceEEEEECCCCceE----EEEeecccceeEEEEEeCCCCEEEEec-CC
Confidence                           0111111  4555666778889998764322    122234566788899999988887765 45


Q ss_pred             cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC
Q psy17188        418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  482 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  482 (504)
                      .|.+||..+++.......   ...+.+++|+|||++|++++.|+.|++||+++++.+.+++.+.+
T Consensus       273 ~v~v~d~~~~~~~~~~~~---~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g  334 (346)
T d1jmxb_         273 RLAKYDLKQRKLIKAANL---DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG  334 (346)
T ss_dssp             EEEEEETTTTEEEEEEEC---SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSS
T ss_pred             eEEEEECCCCcEEEEEcC---CCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCC
Confidence            799999998765544433   23588899999999999999999999999999999999985544

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=5.2e-23  Score=187.31  Aligned_cols=293  Identities=16%  Similarity=0.170  Sum_probs=197.1

Q ss_pred             cEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEE-EecCCCcEEEEeCCCCCccceeeeec--
Q psy17188        126 KYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI-VGGEASNLSIWDLASPTPRIKAELTS--  201 (504)
Q Consensus       126 ~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~--  201 (504)
                      +++++++ |++|+|||++++   +.+..+....+...+.+++|+|||++++ +++.++.|.+||+.+++.........  
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~---~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~   78 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKM---AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT---EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred             eEEEEEcCCCEEEEEECCCC---eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc
Confidence            4677777 999999999885   3344444444556688999999999874 56788999999999876533222211  


Q ss_pred             -CcCceEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCe
Q psy17188        202 -SAPACYALAISPDSKVCFSCC------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  268 (504)
Q Consensus       202 -~~~~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~  268 (504)
                       +...+..++|+|++++++++.            .+..+.+||..+++....+. +...+.+++|+|||+++++++.+  
T Consensus        79 ~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~--  155 (337)
T d1pbyb_          79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRD--  155 (337)
T ss_dssp             EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSS--
T ss_pred             ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcCC--
Confidence             122345789999999988776            35789999999999998888 45668899999999999998754  


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcc-------cceecccCC--ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccce
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVS-------QLDCLQRDN--YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  339 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  339 (504)
                      +.+||..+++... ............       .........  .........+.........++.+.+|+..++.. ..
T Consensus       156 ~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  233 (337)
T d1pbyb_         156 LHVMDPEAGTLVE-DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM-AM  233 (337)
T ss_dssp             EEEEETTTTEEEE-EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE-EE
T ss_pred             cceeeeecCcEEE-EeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE-EE
Confidence            7789999887532 111111000000       000000000  011111122222222333455688999887653 33


Q ss_pred             eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcE
Q psy17188        340 AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNL  419 (504)
Q Consensus       340 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i  419 (504)
                      .....+......+.+++++.  ++...  ++.+++||+.+......      ..+...+.+++|+|||++|++++.++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~i~v~d~~~~~~~~~------~~~~~~~~~~~~s~dG~~l~v~~~~~~i  303 (337)
T d1pbyb_         234 REVRIMDVFYFSTAVNPAKT--RAFGA--YNVLESFDLEKNASIKR------VPLPHSYYSVNVSTDGSTVWLGGALGDL  303 (337)
T ss_dssp             EEEEECSSCEEEEEECTTSS--EEEEE--ESEEEEEETTTTEEEEE------EECSSCCCEEEECTTSCEEEEESBSSEE
T ss_pred             EEecCCCcceEEEEecccce--EEEEc--cccEEEEECCCCcEEEE------EcCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence            34445666788889999987  44433  58999999987533222      2345667899999999999999999999


Q ss_pred             EEeeCCCCCcceeeccc
Q psy17188        420 SIWDLASPTPRIKAELT  436 (504)
Q Consensus       420 ~iwd~~~~~~~~~~~~~  436 (504)
                      ++||.++.+.+......
T Consensus       304 ~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         304 AAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             EEEETTTCCEEEEEECG
T ss_pred             EEEECCCCcEEEEEECC
Confidence            99999988776655543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.92  E-value=2.5e-21  Score=178.88  Aligned_cols=327  Identities=8%  Similarity=0.022  Sum_probs=218.0

Q ss_pred             cCCCcEEEEEEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec------
Q psy17188        111 SHGEVVCAVTISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------  178 (504)
Q Consensus       111 ~h~~~V~~v~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------  178 (504)
                      .+.+++..++++||++.++...      .+.|.+||.++++...   .+.  .+.  ...++|+|||++|++++      
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~---~~~--~~~--~~~~a~SpDG~~l~va~~~~~~~   90 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILG---HVN--GGF--LPNPVAAHSGSEFALASTSFSRI   90 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEE---EEe--CCC--CccEEEcCCCCEEEEEeecCCcc
Confidence            5778899999999999887642      4679999988764332   222  222  33799999999999874      


Q ss_pred             ----CCCcEEEEeCCCCCccceeeeecCcCc-------eEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEeecCCC
Q psy17188        179 ----EASNLSIWDLASPTPRIKAELTSSAPA-------CYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHT  245 (504)
Q Consensus       179 ----~dg~i~iw~~~~~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~  245 (504)
                          .++.|.+||..+++..  .....+...       ...+.|+++++.++...  .++.+.+|+....+......   
T Consensus        91 ~~~~~~~~v~v~D~~t~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---  165 (373)
T d2madh_          91 AKGKRTDYVEVFDPVTFLPI--ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS---  165 (373)
T ss_pred             cccccceEEEEEECCCCcEE--EEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec---
Confidence                3578999999987653  233333222       24578889988666554  45678999988877655443   


Q ss_pred             CCeEEEEEccCCCE-EEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC
Q psy17188        246 DGASCIDISADGTK-LWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS  324 (504)
Q Consensus       246 ~~v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  324 (504)
                       ...++.++|+++. +++.+.|+.+.+|+...++........         ............+.+++++.+ +..+.++
T Consensus       166 -~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  234 (373)
T d2madh_         166 -SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGA---------MLTAAQNLLTQPAQANKSGRI-VWPVYSG  234 (373)
T ss_pred             -cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeee---------ccccCccceeeeEEECCCceE-EEecCCc
Confidence             4568889998875 468889999999999887654321110         011112222345566666654 4555788


Q ss_pred             cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEc
Q psy17188        325 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  404 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s  404 (504)
                      .+.+|+.......................+.|....  ....+.++..                           ...+.
T Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~---------------------------~~~~~  285 (373)
T d2madh_         235 KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ--QVAYLKSSDG---------------------------IYLLT  285 (373)
T ss_pred             eEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcce--eeEEecCCCe---------------------------EEEec
Confidence            999999887654444444333333344444443321  1111111111                           22233


Q ss_pred             CCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE--EEEeeCCCcEEEEEcCCcceEEEEeecCC
Q psy17188        405 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV--CFSCCSDGNIAVWDLHNQTLVRQFQGHTD  482 (504)
Q Consensus       405 ~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  482 (504)
                      .++..++....++.+.+||..+++......   +...+..++|+|||+.  +++++.|+.|++||+.+++.+.++..+..
T Consensus       286 ~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~---~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~  362 (373)
T d2madh_         286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS  362 (373)
T ss_pred             CCCceEEeecCCCeEEEEECCCCcEEEEec---CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCC
Confidence            445566777788899999999887655443   3345788999999984  46788999999999999999999998888


Q ss_pred             ceEEEEEccC
Q psy17188        483 GASCIDISAD  492 (504)
Q Consensus       483 ~v~~~~~s~d  492 (504)
                      ..+.|++.++
T Consensus       363 ~P~~l~~~~~  372 (373)
T d2madh_         363 GPQVLSVMNE  372 (373)
T ss_pred             CCcEEEEecC
Confidence            8888887654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=1.8e-23  Score=191.20  Aligned_cols=293  Identities=15%  Similarity=0.163  Sum_probs=205.6

Q ss_pred             EEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEeec
Q psy17188        165 VKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       165 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      ++|++++++|++++.+++|.+||+.+++.  ...+. .+...+.+++|+|||++++ ++..++.|.+||+.+++.+..+.
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~--~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~   79 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   79 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCE--EEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence            46899999999999999999999997754  33333 3445578999999999775 55578999999999999988775


Q ss_pred             CCC------CCeEEEEEccCCCEEEEEc------------CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        243 GHT------DGASCIDISADGTKLWTGG------------LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       243 ~h~------~~v~~~~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      ...      ..+..++|+|||+++++++            .++.+.+|+..+++..             ..+........
T Consensus        80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~  146 (346)
T d1jmxb_          80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-------------KPVRTFPMPRQ  146 (346)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------CCSEEEECCSS
T ss_pred             ccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceee-------------eEEEeeeccCc
Confidence            432      2356789999999888765            3567777877765421             02222233344


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKT  384 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~  384 (504)
                      +..+.++++++.++.+   +.+.+|++.+.+..  ..+..+ .....+.++|++.. +++....++.+.+++.       
T Consensus       147 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------  212 (346)
T d1jmxb_         147 VYLMRAADDGSLYVAG---PDIYKMDVKTGKYT--VALPLR-NWNRKGYSAPDVLY-FWPHQSPRHEFSMLYT-------  212 (346)
T ss_dssp             CCCEEECTTSCEEEES---SSEEEECTTTCCEE--EEECST-TCCCTTBCCCBCCC-CCCCCCTTCEEEEEEE-------
T ss_pred             eEEEEecCCCEEEEeC---CcceEEEccCCCEE--EEEecC-CCccceEEeccccE-EEEEecCCCceEeeee-------
Confidence            5667777777766542   46889998876433  223222 24566677888775 4455555566665543       


Q ss_pred             cccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEE
Q psy17188        385 PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  464 (504)
Q Consensus       385 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~  464 (504)
                                     ...+.+....++++..+..+.+||..++..... ....+...+..+.+++++.+++.... +.|+
T Consensus       213 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~  275 (346)
T d1jmxb_         213 ---------------IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ-EFADLTELYFTGLRSPKDPNQIYGVL-NRLA  275 (346)
T ss_dssp             ---------------EEEC-------CCCEEEEEEEEEETTTCCEEEE-EEEECSSCEEEEEECSSCTTEEEEEE-SEEE
T ss_pred             ---------------eeeeccCceeEeeccCCceEEEEECCCCceEEE-EeecccceeEEEEEeCCCCEEEEecC-CeEE
Confidence                           222333445566667778899999988764433 34445667888899999888887754 5799


Q ss_pred             EEEcCCcceEEEEeecCCceEEEEEccCCCEEEEecCCCC
Q psy17188        465 VWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNT  504 (504)
Q Consensus       465 iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~Dgt  504 (504)
                      +||..+++.+..+. +...+.+++|+|||++|++++.||+
T Consensus       276 v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~  314 (346)
T d1jmxb_         276 KYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND  314 (346)
T ss_dssp             EEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSE
T ss_pred             EEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCc
Confidence            99999999988876 4567999999999999999999874

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.7e-20  Score=170.32  Aligned_cols=287  Identities=17%  Similarity=0.283  Sum_probs=194.0

Q ss_pred             EEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceee-eecCcC
Q psy17188        128 VYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAE-LTSSAP  204 (504)
Q Consensus       128 l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~-~~~~~~  204 (504)
                      ++++. |++|++|+++..+.   +..+....+.+.+..++|+|||++|+++ ..|+.|++|++.......... ...+..
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~---l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~   83 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGA---LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   83 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSC---EEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEECCCCCcEEEEEEcCCCC---eEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCC
Confidence            34444 99999999986433   3334444678899999999999999655 458999999998655432222 223344


Q ss_pred             ceEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEe--ecCCCCCeEEEEEccCCCEEEEEcC-CCeEEEEECCCCceE
Q psy17188        205 ACYALAISPDSKVCFSCCS-DGNIAVWDLHNQTLVRQ--FQGHTDGASCIDISADGTKLWTGGL-DNTVRSWDLREGCVK  280 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~  280 (504)
                      .+..++|+|||++|++++. ++.|.+|+.........  ...+...+.++.++|+++++++++. +..+.+|+.......
T Consensus        84 ~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~  163 (333)
T d1ri6a_          84 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL  163 (333)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred             CceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcc
Confidence            5678999999999998875 66899998877654433  3456778889999999998877764 457999998765432


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCcccee--ee------ccCCCceee
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTPRIKA--EL------TSSAPACYA  351 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~--~~------~~~~~~i~~  351 (504)
                      .....         .............++|++++..++... ..+...+++..........  ..      .........
T Consensus       164 ~~~~~---------~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (333)
T d1ri6a_         164 VAQDP---------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD  234 (333)
T ss_dssp             EEEEE---------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred             eeeec---------eeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCcccccee
Confidence            11100         111223345568899999998877654 4566778876544322211  11      112335567


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeC--CCCC
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDL--ASPT  428 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~--~~~~  428 (504)
                      ++++++++. +++....++.+.+|++...........  .......+..++|+|||++|++++. ++.|.+|++  ++++
T Consensus       235 ~~~s~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~  311 (333)
T d1ri6a_         235 IHITPDGRH-LYACDRTASLITVFSVSEDGSVLSKEG--FQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL  311 (333)
T ss_dssp             EEECTTSSE-EEEEETTTTEEEEEEECTTSCCEEEEE--EEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             EEEecccCc-eeeecccCCeEEEEEEcCCCCEEEEEE--EeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCc
Confidence            889999986 667777888999999876544332222  2233455678999999999887654 578999955  4443


Q ss_pred             c
Q psy17188        429 P  429 (504)
Q Consensus       429 ~  429 (504)
                      .
T Consensus       312 l  312 (333)
T d1ri6a_         312 L  312 (333)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=6.1e-22  Score=181.71  Aligned_cols=315  Identities=12%  Similarity=0.107  Sum_probs=194.8

Q ss_pred             EEEEEEcCCCcEEEEec------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec----------C
Q psy17188        116 VCAVTISNPTKYVYTGG------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG----------E  179 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~  179 (504)
                      +...+.+||++.++...      ++.|.+||..+++.   +..+.  .  +....++|+|||++|++.+          .
T Consensus         4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~---~~~~~--~--g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~   76 (355)
T d2bbkh_           4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV---IGMID--G--GFLPNPVVADDGSFIAHASTVFSRIARGER   76 (355)
T ss_dssp             CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE---EEEEE--E--CSSCEEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred             cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcE---EEEEE--C--CCCCceEEcCCCCEEEEEeCCCccccccCC
Confidence            34446689999887642      55799999988632   23322  1  2344799999999988753          4


Q ss_pred             CCcEEEEeCCCCCccceeeeec-----CcCceEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEeecCCCCCeEEEE
Q psy17188        180 ASNLSIWDLASPTPRIKAELTS-----SAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDGASCID  252 (504)
Q Consensus       180 dg~i~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~  252 (504)
                      |+.|++||+.+++.........     .......++|+++++++++++  .+..+.+|+..+++.+..+..+.....   
T Consensus        77 d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  153 (355)
T d2bbkh_          77 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI---  153 (355)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEE---
T ss_pred             CCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceE---
Confidence            7889999999876533222111     111234579999999887765  456799999999999888775432211   


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      +.......++.+.|+....+..... ..........          ...+...+....+.+++..++.++.++.+++|++
T Consensus       154 ~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  223 (355)
T d2bbkh_         154 FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF----------HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL  223 (355)
T ss_dssp             EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCC----------SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEEC
T ss_pred             eecCCcceEEEcCCCCEEEEEecCCCeEEEEecccc----------cceecceeeeccccCCCCeEEEecCCCeEEEEec
Confidence            1111223333344444444433222 1111111100          1122233445677888888999999999999999


Q ss_pred             CCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEE
Q psy17188        332 ASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLI  411 (504)
Q Consensus       332 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~  411 (504)
                      ..+..........+........+.|++                                       ...+++++++..++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~p~~---------------------------------------~~~~~~~~d~~~~~  264 (355)
T d2bbkh_         224 SSGDAKFLPAVEALTEAERADGWRPGG---------------------------------------WQQVAYHRALDRIY  264 (355)
T ss_dssp             TTSSCEECCCEESSCHHHHHTTEEECS---------------------------------------SSCEEEETTTTEEE
T ss_pred             CCCcEEEEeccCCcccceEeeeeeccc---------------------------------------eEEEEEeCCCCeEE
Confidence            876433222222221111111111111                                       12467777777776


Q ss_pred             EeeCC----------CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC--EEEEeeCCCcEEEEEcCCcceEEEEee
Q psy17188        412 VGGEA----------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       412 ~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      ....+          ..|.+||..+++.......   ...+.+++|+|||+  +++++..|+.|++||+++++.+.++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~---~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~  341 (355)
T d2bbkh_         265 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM---GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ  341 (355)
T ss_dssp             EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred             EEeccCCceeecCCCCeEEEEeCCCCcEEEEecC---CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeC
Confidence            65433          3599999998876554433   23478899999998  445677799999999999999999987


Q ss_pred             cCCceEEEEEccC
Q psy17188        480 HTDGASCIDISAD  492 (504)
Q Consensus       480 h~~~v~~~~~s~d  492 (504)
                      +......+.+.++
T Consensus       342 ~G~~p~~i~~~d~  354 (355)
T d2bbkh_         342 LGHGPQVITTADM  354 (355)
T ss_dssp             CCSSCCEEECCCC
T ss_pred             cCCCccEEEeCCC
Confidence            7666666665544

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.7e-20  Score=168.87  Aligned_cols=287  Identities=14%  Similarity=0.281  Sum_probs=194.7

Q ss_pred             EEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEee---cCCCCCe
Q psy17188        173 TLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQF---QGHTDGA  248 (504)
Q Consensus       173 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~---~~h~~~v  248 (504)
                      .+++++.|++|++|++.............|...+..++|+|||++|++++ .|+.|++|++........+   ..+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            34677789999999998654433444456778899999999999886555 5899999999765322221   2245567


Q ss_pred             EEEEEccCCCEEEEEcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcE
Q psy17188        249 SCIDISADGTKLWTGGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNL  326 (504)
Q Consensus       249 ~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i  326 (504)
                      ..++|+|||++|++++. ++.+.+|+........             ......+...+.++.++|+++++++++. +..+
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~-------------~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i  152 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG-------------VVDVVEGLDGCHSANISPDNRTLWVPALKQDRI  152 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE-------------EEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeecccccccee-------------cccccCCCccceEEEeeecceeeecccccccee
Confidence            88999999999988875 6789999887765322             2333445566788999999998888764 4568


Q ss_pred             EEEeCCCCCccceee----eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccc-----cccccCCCc
Q psy17188        327 SIWDLASPTPRIKAE----LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ-----LDCLQRDNY  397 (504)
Q Consensus       327 ~v~d~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~  397 (504)
                      .+|+...........    ..........+++++++.. .+.+....+...+++............     .........
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (333)
T d1ri6a_         153 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY-AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW  231 (333)
T ss_dssp             EEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred             eEEEeccCCcceeeeceeeeeecCCCccEEEEecccee-EEeeccccCceEEEeecccccceeeeeeeeeeecCCCcccc
Confidence            999987654332221    2223345678999999885 455566677888888765432211110     011123445


Q ss_pred             eEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCccee-ecccCCCCceeEEEECCCCCEEEEeeC-CCcEEEEE--cCCcc
Q psy17188        398 IRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIK-AELTSSAPACYALAISPDSKVCFSCCS-DGNIAVWD--LHNQT  472 (504)
Q Consensus       398 i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd--~~~~~  472 (504)
                      ...+++++++++++.. ..++.+.+|++........ .........+..++|+|||++|++++. ++.|++|+  .++|+
T Consensus       232 ~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~  311 (333)
T d1ri6a_         232 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL  311 (333)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             ceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCc
Confidence            6788999999977665 4567899998876543322 222233345677899999999887654 68899995  46665


Q ss_pred             e
Q psy17188        473 L  473 (504)
Q Consensus       473 ~  473 (504)
                      +
T Consensus       312 l  312 (333)
T d1ri6a_         312 L  312 (333)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.83  E-value=5e-18  Score=156.42  Aligned_cols=286  Identities=10%  Similarity=0.009  Sum_probs=191.2

Q ss_pred             ecCcCceEEEEECCCCCEEEEEe-----CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc----------
Q psy17188        200 TSSAPACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG----------  264 (504)
Q Consensus       200 ~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------  264 (504)
                      ..+..++..++++||++.+++..     ..+.|.+||..+++.+.++..+...  .++|+|||++|++++          
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccc
Confidence            35667788999999999887652     3457999999999999998866544  799999999998875          


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCccceeee
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAEL  342 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~  342 (504)
                      .++.|.+||..+++...- +....       ............+.|+++++.+++..  .++.+.+|+....+..     
T Consensus        95 ~~~~v~v~D~~t~~~~~~-~~~~~-------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~-----  161 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIAD-IELPD-------APRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDD-----  161 (373)
T ss_pred             cceEEEEEECCCCcEEEE-EecCC-------cceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEE-----
Confidence            467899999999875311 11100       00001112235688999998776654  4567888887765321     


Q ss_pred             ccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccccc-ccCCCceEEEEEcCCCCEEEEeeCCCcEEE
Q psy17188        343 TSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDC-LQRDNYIRSVKLLPDGRTLIVGGEASNLSI  421 (504)
Q Consensus       343 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~i  421 (504)
                       .+.....++.++|+++. .+++.+.++.+.+|+............... ...........+++++.++ ..+.++.+.+
T Consensus       162 -~~~~~~~~~~~s~~g~~-~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~  238 (373)
T d2madh_         162 -QLLSSPTCYHIHPGAPS-TFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV-WPVYSGKILQ  238 (373)
T ss_pred             -EEeccceeEEEecCCCc-EEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEE-EecCCceEEE
Confidence             22224567889999886 677888999999999876543332221111 1122233456666666554 4557888999


Q ss_pred             eeCCCCCcceeecccCCC----------CceeEEEECCCCCEEE----------EeeCCCcEEEEEcCCcceEEEEeecC
Q psy17188        422 WDLASPTPRIKAELTSSA----------PACYALAISPDSKVCF----------SCCSDGNIAVWDLHNQTLVRQFQGHT  481 (504)
Q Consensus       422 wd~~~~~~~~~~~~~~~~----------~~v~~l~~s~~~~~l~----------s~~~dg~i~iwd~~~~~~~~~~~~h~  481 (504)
                      |+................          .....+++++++..++          +...++.+.+||..+++.+..+. +.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~  317 (373)
T d2madh_         239 ADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LG  317 (373)
T ss_pred             EEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CC
Confidence            998876543332222111          1223456666665544          44556789999999999998876 66


Q ss_pred             CceEEEEEccCCCE--EEEecCCCC
Q psy17188        482 DGASCIDISADGTK--LWTGGLDNT  504 (504)
Q Consensus       482 ~~v~~~~~s~d~~~--l~s~s~Dgt  504 (504)
                      ..+.+++|+|||+.  +++++.|++
T Consensus       318 ~~~~~~a~spDG~~~l~vt~~~d~~  342 (373)
T d2madh_         318 HDVDAISVAQDGGPDLYALSAGTEV  342 (373)
T ss_pred             CCeeEEEECCCCCEEEEEEeCCCCe
Confidence            77999999999985  467777774

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.82  E-value=4.3e-18  Score=161.96  Aligned_cols=352  Identities=14%  Similarity=0.072  Sum_probs=209.5

Q ss_pred             EEEEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC---------CCcEEEEeC
Q psy17188        118 AVTISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---------ASNLSIWDL  188 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~iw~~  188 (504)
                      .+.|.+++.++.. .|+.+.+||+.+++....+....+..+...|.++.|||||++|+.++.         ++.+.+||+
T Consensus        21 ~~~W~~d~~~~~~-~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~   99 (470)
T d2bgra1          21 SLRWISDHEYLYK-QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL   99 (470)
T ss_dssp             CCEECSSSEEEEE-SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             CCEeCCCCEEEEE-cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEEC
Confidence            4678899987764 477899999998764433333344456778999999999999998743         567899999


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCC------------------CCCeEE
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH------------------TDGASC  250 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h------------------~~~v~~  250 (504)
                      .+++   ...+..+...+..+.|||||+.+|.. .++.+.+|+..+++..+....+                  .+....
T Consensus       100 ~~~~---~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~  175 (470)
T d2bgra1         100 NKRQ---LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA  175 (470)
T ss_dssp             TTTE---ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred             CCCc---ccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccc
Confidence            9765   44567788889999999999999986 5678999999988766554322                  233456


Q ss_pred             EEEccCCCEEEEEcCCCe-EEEEEC---CC---Cc-------------------eEEEeecCCCCCCCcccc------ee
Q psy17188        251 IDISADGTKLWTGGLDNT-VRSWDL---RE---GC-------------------VKVWDISQPGSKTPVSQL------DC  298 (504)
Q Consensus       251 ~~~~~~~~~l~s~~~dg~-i~~wd~---~~---~~-------------------~~~~~~~~~~~~~~~~~~------~~  298 (504)
                      +.|+|||++|++...|.+ +..|++   ..   ..                   +.+++.............      ..
T Consensus       176 ~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  255 (470)
T d2bgra1         176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM  255 (470)
T ss_dssp             EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHH
T ss_pred             cEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCcccc
Confidence            889999999999876543 333332   11   00                   112222211111100000      01


Q ss_pred             cccCCceEEEEEcCCCCEEEEEe-CCC---cEEEE--eCCCCCccceee----eccCC-----CceeeEEECCCCCCcee
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGG-EAS---NLSIW--DLASPTPRIKAE----LTSSA-----PACYALAISPDSKSPFF  363 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~-~dg---~i~v~--d~~~~~~~~~~~----~~~~~-----~~i~~~~~~~~~~~~~~  363 (504)
                      ......+..+.|.++++.++... ..+   .+.++  |..++.......    .....     .......+.+++...++
T Consensus       256 ~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  335 (470)
T d2bgra1         256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYK  335 (470)
T ss_dssp             HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEE
T ss_pred             CCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEE
Confidence            12234467788998887665532 222   23344  444432211100    00000     11123455566655456


Q ss_pred             eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEE-EEeeCCC----cEEEe--eCCCCCccee--ec
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTL-IVGGEAS----NLSIW--DLASPTPRIK--AE  434 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~~~~dg----~i~iw--d~~~~~~~~~--~~  434 (504)
                      .....++...+|...........  +  ......|..+ ++++++.+ +++..++    .-+||  ++..+.....  ..
T Consensus       336 ~~s~~dg~~~ly~~~~~g~~~~~--l--t~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~  410 (470)
T d2bgra1         336 IISNEEGYRHICYFQIDKKDCTF--I--TKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCE  410 (470)
T ss_dssp             EEECTTSCEEEEEEETTCSCCEE--S--CCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTT
T ss_pred             EEeccCcCceeEEEeccCCceee--e--ccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEeccc
Confidence            66677776666655432222111  1  1234445555 44444444 3443322    22344  4443332222  23


Q ss_pred             ccCCCCceeEEEECCCCCEEEE---eeCCCcEEEEEcCCcceEEEEee
Q psy17188        435 LTSSAPACYALAISPDSKVCFS---CCSDGNIAVWDLHNQTLVRQFQG  479 (504)
Q Consensus       435 ~~~~~~~v~~l~~s~~~~~l~s---~~~dg~i~iwd~~~~~~~~~~~~  479 (504)
                      +..+...+..++|||||++++.   +...-.+.+|+..+++.+..+..
T Consensus       411 ~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le~  458 (470)
T d2bgra1         411 LNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLED  458 (470)
T ss_dssp             TSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEEC
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEec
Confidence            4567777899999999999873   33344689999999999998874

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.80  E-value=2e-18  Score=157.92  Aligned_cols=274  Identities=13%  Similarity=0.057  Sum_probs=180.9

Q ss_pred             EEECCCCCEEEEEe-----CCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE----------cCCCeEEEEE
Q psy17188        209 LAISPDSKVCFSCC-----SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG----------GLDNTVRSWD  273 (504)
Q Consensus       209 ~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----------~~dg~i~~wd  273 (504)
                      .+.+||++.+++..     .+..|.+||..+++.+.++..+..+  .++|+|||++|++.          +.|+.|++||
T Consensus         7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D   84 (355)
T d2bbkh_           7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD   84 (355)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             EeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEE
Confidence            35689999887654     3557999999999999988765544  79999999988764          3478999999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCccceeeeccC-----C
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG--EASNLSIWDLASPTPRIKAELTSS-----A  346 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~-----~  346 (504)
                      +.+++....-....        ............++|+++++++++..  .+..+.+|+..+.+..........     .
T Consensus        85 ~~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (355)
T d2bbkh_          85 PVTLLPTADIELPD--------APRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT  156 (355)
T ss_dssp             TTTCCEEEEEEETT--------CCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred             CCCCCEEEEEecCC--------cceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeec
Confidence            99987532111000        00111123345689999999988775  456789999987743322221110     1


Q ss_pred             CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC
Q psy17188        347 PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS  426 (504)
Q Consensus       347 ~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~  426 (504)
                      .....+.++++++. +++....++.+.+++......          .+...+....+++++..++.++.++.+++|++..
T Consensus       157 ~~~~~~~~~~dg~~-~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  225 (355)
T d2bbkh_         157 APDTFFMHCRDGSL-AKVAFGTEGTPEITHTEVFHP----------EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS  225 (355)
T ss_dssp             ETTEEEEEETTSCE-EEEECCSSSCCEEEECCCCSC----------TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTT
T ss_pred             CCcceEEEcCCCCE-EEEEecCCCeEEEEecccccc----------eecceeeeccccCCCCeEEEecCCCeEEEEecCC
Confidence            12334566777664 334444455556665543221          1222344567788888899999999999999987


Q ss_pred             CCcceeecccCC----------CCceeEEEECCCCCEEEEeeCC----------CcEEEEEcCCcceEEEEeecCCceEE
Q psy17188        427 PTPRIKAELTSS----------APACYALAISPDSKVCFSCCSD----------GNIAVWDLHNQTLVRQFQGHTDGASC  486 (504)
Q Consensus       427 ~~~~~~~~~~~~----------~~~v~~l~~s~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~h~~~v~~  486 (504)
                      ++.........+          ......+++++++..++....+          ..|.+||..+++.+..+.. ...+.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~  304 (355)
T d2bbkh_         226 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDS  304 (355)
T ss_dssp             SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECE
T ss_pred             CcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC-CCCEEE
Confidence            654332222111          1122347999999988876543          3699999999999988874 456889


Q ss_pred             EEEccCCC--EEEEecCCCC
Q psy17188        487 IDISADGT--KLWTGGLDNT  504 (504)
Q Consensus       487 ~~~s~d~~--~l~s~s~Dgt  504 (504)
                      ++|+|||+  ++++++.|++
T Consensus       305 ~a~spDG~~~l~v~~~~d~~  324 (355)
T d2bbkh_         305 INVSQDEKPLLYALSTGDKT  324 (355)
T ss_dssp             EEECCSSSCEEEEEETTTTE
T ss_pred             EEEcCCCCeEEEEEECCCCE
Confidence            99999998  3456666653

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.76  E-value=1.9e-17  Score=152.03  Aligned_cols=314  Identities=9%  Similarity=0.008  Sum_probs=186.3

Q ss_pred             CCCcEEEEEEcCCCcE--EEE-ec-CCe--EEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-------
Q psy17188        112 HGEVVCAVTISNPTKY--VYT-GG-KGC--VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------  178 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~--l~~-~~-d~~--i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------  178 (504)
                      +.+....++..++++.  ++. .. ++.  +.+||..+++   .+..+.  .+.  ...++|+|||+.|++.+       
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~---~~~~~~--~~~--~~~~a~spDg~~i~~~~~~~~~~~   90 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGV---TLGHSL--GAF--LSLAVAGHSGSDFALASTSFARSA   90 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTE---EEEEEE--ECT--TCEEEECTTSSCEEEEEEEETTTT
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCc---EEEEEe--CCC--CCcceECCCCCEEEEEcccCcccc
Confidence            3444455566677764  333 22 444  6666876643   222222  222  23589999999998854       


Q ss_pred             ---CCCcEEEEeCCCCCccceeeeecC-----cCceEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        179 ---EASNLSIWDLASPTPRIKAELTSS-----APACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       179 ---~dg~i~iw~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                         .|+.|.+||..+.+......+..+     ......++|+|||++|+++. .++.+.+||+.+++.+..+..+.....
T Consensus        91 ~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~  170 (368)
T d1mdah_          91 KGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI  170 (368)
T ss_dssp             SSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC
T ss_pred             ccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE
Confidence               367799999998765333322211     11123589999999888776 579999999999999988876554321


Q ss_pred             EEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17188        250 CIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  329 (504)
Q Consensus       250 ~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~  329 (504)
                         +......++..+.||.+.++++.......+.....         ....+...+....+.+++..+...  .+.++++
T Consensus       171 ---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~  236 (368)
T d1mdah_         171 ---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ---------CTGAQNCSSQAAQANYPGMLVWAV--ASSILQG  236 (368)
T ss_dssp             ---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC---------SCTTSCBCSCCEEETTTTEEEECB--SSCCEEE
T ss_pred             ---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecc---------cccccccceeecccccCcEEEEec--CCCEEEE
Confidence               11234467777889999999887665332221111         111223344556777777655543  4556666


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCE
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRT  409 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~  409 (504)
                      +.......................+.                                       ......+++++++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~g~~~~a~~~~~~~  277 (368)
T d1mdah_         237 DIPAAGATMKAAIDGNESGRKADNFR---------------------------------------SAGFQMVAKLKNTDG  277 (368)
T ss_dssp             ECCSSCCEEECCCCSSCTHHHHTTEE---------------------------------------ECSSSCEEEETTTTE
T ss_pred             eecCCceEEEeecccccceeeeeeec---------------------------------------CCCceeEEEcCCCCE
Confidence            66544221111111100000000000                                       011124677777776


Q ss_pred             EEEeeCC---------CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE--EEEeeCCCcEEEEEcCCcceEEEEe
Q psy17188        410 LIVGGEA---------SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV--CFSCCSDGNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       410 l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~  478 (504)
                      +++...+         ..|.+||..+++.......   ...+..++|+|||+.  ++++..|+.|++||..+++.+.++.
T Consensus       278 ~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~---~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~  354 (368)
T d1mdah_         278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN---GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE  354 (368)
T ss_dssp             EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred             EEEEecCCCceeecCCceEEEEECCCCcEeEEecC---CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEE
Confidence            6654322         2488999998875544432   245788999999973  4566778999999999999999887


Q ss_pred             ecCCceEEEEE
Q psy17188        479 GHTDGASCIDI  489 (504)
Q Consensus       479 ~h~~~v~~~~~  489 (504)
                      .... .+.|++
T Consensus       355 ~g~~-P~~l~~  364 (368)
T d1mdah_         355 LDKG-PESLSV  364 (368)
T ss_dssp             CCSC-CCEEEC
T ss_pred             CCCC-CCEEEE
Confidence            5432 344443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.72  E-value=1.1e-15  Score=145.21  Aligned_cols=157  Identities=12%  Similarity=0.066  Sum_probs=110.4

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEeCCCCCcccee---eeecCcCceEEEEECCCCCEEEEEeC---------CCcEEEE
Q psy17188        163 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA---ELTSSAPACYALAISPDSKVCFSCCS---------DGNIAVW  230 (504)
Q Consensus       163 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~iw  230 (504)
                      ..+.|.++++++..  .++.+.+||+.+++.....   .+..|...|.++.||||+++|+.++.         ++.+.+|
T Consensus        20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~   97 (470)
T d2bgra1          20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY   97 (470)
T ss_dssp             CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence            35789999987764  4788999999988753221   33445677999999999999998753         5678999


Q ss_pred             ECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCC--Cc-ccceecccCCceEE
Q psy17188        231 DLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKT--PV-SQLDCLQRDNYIRS  307 (504)
Q Consensus       231 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~v~~  307 (504)
                      |+.+++. ..+..+...+..+.|+|||+.|+.. .++.+++|+..+++.............  .. ..............
T Consensus        98 d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~  175 (470)
T d2bgra1          98 DLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA  175 (470)
T ss_dssp             ETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred             ECCCCcc-cccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccc
Confidence            9999875 5677799999999999999999986 477899999998864322111100000  00 00000112334567


Q ss_pred             EEEcCCCCEEEEEeCC
Q psy17188        308 VKLLPDGRTLIVGGEA  323 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~d  323 (504)
                      +.|+|||+.|+....|
T Consensus       176 ~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         176 LWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             EEECTTSSEEEEEEEE
T ss_pred             cEECCCCCccceeEec
Confidence            8899999999987644

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.71  E-value=3.1e-17  Score=149.00  Aligned_cols=298  Identities=10%  Similarity=0.020  Sum_probs=183.4

Q ss_pred             EEEecCCCcEEEEeCCCCCcccee----------------------------eeecCcCceEEEEECCCCCEEEEEe-CC
Q psy17188        174 LIVGGEASNLSIWDLASPTPRIKA----------------------------ELTSSAPACYALAISPDSKVCFSCC-SD  224 (504)
Q Consensus       174 l~~~~~dg~i~iw~~~~~~~~~~~----------------------------~~~~~~~~v~~~~~s~~~~~l~~~~-~d  224 (504)
                      +++++.+|+|.+|++.+.+.....                            ....|........++|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            456677888888888655321110                            0112334455666688999887665 67


Q ss_pred             CcEEEEECCCCeEEEeec-CCCCCeEEEEEccCCC--EEEEEcCCC-----------------eEEEEECCCCceEEEee
Q psy17188        225 GNIAVWDLHNQTLVRQFQ-GHTDGASCIDISADGT--KLWTGGLDN-----------------TVRSWDLREGCVKVWDI  284 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~--~l~s~~~dg-----------------~i~~wd~~~~~~~~~~~  284 (504)
                      ++|.++|+++++....+. .+...+..++|+|+++  +++..+.+.                 .+..+|..+.++     
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v-----  168 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV-----  168 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE-----
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee-----
Confidence            789999999999887765 3567899999999988  444444332                 123455555442     


Q ss_pred             cCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCcee
Q psy17188        285 SQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFF  363 (504)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  363 (504)
                                 .........+..+.++|+|+++++.+.+. .+..++..+..........   .....+.+.++++.  +
T Consensus       169 -----------~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~---n~p~~~~~~~dGk~--~  232 (441)
T d1qnia2         169 -----------AWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF---NVERIAAAVKAGNF--K  232 (441)
T ss_dssp             -----------EEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE---EHHHHHHHHHTTCC--B
T ss_pred             -----------eEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC---CccceEEEecCCCE--E
Confidence                       11122234578899999999999887653 2333333332211111111   02233456778873  3


Q ss_pred             eeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE-eeCCCcEEEeeCCCCCcc------e---ee
Q psy17188        364 SSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV-GGEASNLSIWDLASPTPR------I---KA  433 (504)
Q Consensus       364 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~iwd~~~~~~~------~---~~  433 (504)
                      .. ..++.+.+++.........+      ........+.++|||+++++ +..+++|.+||+.+....      .   ..
T Consensus       233 ~v-~~~~v~vvd~~~~~~v~~~I------PvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~  305 (441)
T d1qnia2         233 TI-GDSKVPVVDGRGESEFTRYI------PVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIV  305 (441)
T ss_dssp             CC-TTCCCCEEECSSSCSSEEEE------CCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEE
T ss_pred             Ee-CCCCcEEEEcccCCceEEEE------eCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEE
Confidence            33 34566677665443221111      12233458999999998765 567899999998642110      0   00


Q ss_pred             cccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCC----------cceEEEE-----eecCCceEEEEEccCCCEEEE
Q psy17188        434 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----------QTLVRQF-----QGHTDGASCIDISADGTKLWT  498 (504)
Q Consensus       434 ~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~-----~~h~~~v~~~~~s~d~~~l~s  498 (504)
                      ............+|+++|+.+.+...|..|..|++..          ...+..+     .+|...+.+.+++|||+||++
T Consensus       306 ~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s  385 (441)
T d1qnia2         306 AEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVV  385 (441)
T ss_dssp             ECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEE
T ss_pred             eecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEe
Confidence            0011111234468999999888999999999999742          1234444     477777788889999999999


Q ss_pred             e
Q psy17188        499 G  499 (504)
Q Consensus       499 ~  499 (504)
                      +
T Consensus       386 ~  386 (441)
T d1qnia2         386 L  386 (441)
T ss_dssp             E
T ss_pred             c
Confidence            9

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.65  E-value=7.8e-17  Score=146.37  Aligned_cols=289  Identities=13%  Similarity=0.038  Sum_probs=181.5

Q ss_pred             CceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCC--EEEEEeCCC-----------
Q psy17188        160 NYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDG-----------  225 (504)
Q Consensus       160 ~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg-----------  225 (504)
                      .......++|||++|++. ..+++|.++|+++.+...+..+ .+...+..++|+|+++  +++..+++.           
T Consensus        72 P~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~i-P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~  150 (441)
T d1qnia2          72 PHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHI-PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFS  150 (441)
T ss_dssp             CEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEEC-TTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCC
T ss_pred             CCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEec-CCCCCccceEEeccCCEEEEEeccCCcccccCcccccc
Confidence            345555567999999766 4678899999998765433332 3455688999999998  444444332           


Q ss_pred             ------cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC-eEEEEECCCCceEEEeecCCCCCCCccccee
Q psy17188        226 ------NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN-TVRSWDLREGCVKVWDISQPGSKTPVSQLDC  298 (504)
Q Consensus       226 ------~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (504)
                            .+..+|..+.+...++.. .+....+.++|+|+++++.+.+. .+..++..+...                ...
T Consensus       151 ~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~----------------~d~  213 (441)
T d1qnia2         151 LDNSYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRND----------------RDW  213 (441)
T ss_dssp             GGGEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSS----------------BCE
T ss_pred             cccccceEEeecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcce----------------EEE
Confidence                  235688888887777763 34578899999999988877653 232223222210                000


Q ss_pred             cccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecC
Q psy17188        299 LQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDIS  378 (504)
Q Consensus       299 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~  378 (504)
                      .........+.+.++|+++.++ .++.+.+++.....  ....++... ....+.++|||+. +++++..++++.+||++
T Consensus       214 i~v~n~p~~~~~~~dGk~~~v~-~~~v~vvd~~~~~~--v~~~IPvgk-sPhGv~vSPDGky-l~~~~~~~~tvsv~d~~  288 (441)
T d1qnia2         214 VVVFNVERIAAAVKAGNFKTIG-DSKVPVVDGRGESE--FTRYIPVPK-NPHGLNTSPDGKY-FIANGKLSPTVSVIAID  288 (441)
T ss_dssp             EEEEEHHHHHHHHHTTCCBCCT-TCCCCEEECSSSCS--SEEEECCBS-SCCCEEECTTSCE-EEEECTTSSBEEEEEGG
T ss_pred             EEeCCccceEEEecCCCEEEeC-CCCcEEEEcccCCc--eEEEEeCCC-CccCceECCCCCE-EEEeCCcCCcEEEEEee
Confidence            0011112233456788877654 45677777665442  333344433 4678999999996 67888999999999986


Q ss_pred             CCCC-----CCccccc-ccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCC---------CCcce-ee---cccCCC
Q psy17188        379 QPGS-----KTPVSQL-DCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLAS---------PTPRI-KA---ELTSSA  439 (504)
Q Consensus       379 ~~~~-----~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~---------~~~~~-~~---~~~~~~  439 (504)
                      +...     ....... ......-.....+|+++|..+.+...|..|..|++..         ...+. ..   ...+|.
T Consensus       289 k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~  368 (441)
T d1qnia2         289 KLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHN  368 (441)
T ss_dssp             GHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEE
T ss_pred             hhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCC
Confidence            5211     0100110 0011122345678999998888889999999999741         11111 11   124566


Q ss_pred             CceeEEEECCCCCEEEEe---eCCC----------cEEEEEcCCc
Q psy17188        440 PACYALAISPDSKVCFSC---CSDG----------NIAVWDLHNQ  471 (504)
Q Consensus       440 ~~v~~l~~s~~~~~l~s~---~~dg----------~i~iwd~~~~  471 (504)
                      ..+.+.+++|||+||+++   +.|.          +-.+.|+...
T Consensus       369 ~~~~~~t~~pdGk~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~~~  413 (441)
T d1qnia2         369 HASLTESRDADGKWLVVLSKFSKDRFLPVGPLHPENDQLIDISGE  413 (441)
T ss_dssp             EETTTTSTTCCCCEEEEEESCCGGGSCCCSSSCCEEEEEEECSSS
T ss_pred             ccccccccCCCCcEEEecCccccccCcCCCCCCCccceeEEecCC
Confidence            666677899999999999   4454          3467777643

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.59  E-value=4.1e-14  Score=129.50  Aligned_cols=276  Identities=9%  Similarity=-0.040  Sum_probs=158.0

Q ss_pred             CCCceEEEEEccCCCEEE--E-ecCCCc--EEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEe----------
Q psy17188        158 RDNYIRSVKLLPDGRTLI--V-GGEASN--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCC----------  222 (504)
Q Consensus       158 ~~~~v~~~~~s~~~~~l~--~-~~~dg~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------  222 (504)
                      +.+....++..++++...  . ...++.  |.+||..+++.  ......+...  .++|+|||+.|++.+          
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~--~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~   93 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVT--LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGK   93 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEE--EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSS
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcE--EEEEeCCCCC--cceECCCCCEEEEEcccCccccccc
Confidence            344555566677887532  2 334444  66668776653  4444444443  589999999888765          


Q ss_pred             CCCcEEEEECCCCeEEEeecCCCC-------CeEEEEEccCCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcc
Q psy17188        223 SDGNIAVWDLHNQTLVRQFQGHTD-------GASCIDISADGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVS  294 (504)
Q Consensus       223 ~dg~i~iwd~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~  294 (504)
                      .|+.|.+||..+++.+..+..+..       ....++|+|||++|+++. .++.+.+||+.+++....            
T Consensus        94 ~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~------------  161 (368)
T d1mdah_          94 RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQL------------  161 (368)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEE------------
T ss_pred             cCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEE------------
Confidence            367799999999998887754432       234689999999888775 579999999999874211            


Q ss_pred             cceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        295 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       295 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                       ..  .+....  + +......++..+.||.+.++++...............                            
T Consensus       162 -~~--~~~~~~--~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~----------------------------  207 (368)
T d1mdah_         162 -TK--SASCFH--I-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT----------------------------  207 (368)
T ss_dssp             -EE--CSSCCC--C-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC----------------------------
T ss_pred             -ee--ccCcce--E-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccc----------------------------
Confidence             00  000000  0 1112334555566777777766543211111000000                            


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccC----------CCCceeE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS----------SAPACYA  444 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v~~  444 (504)
                                       ..+...+....+.+++..+...  .+.+++++..............          .......
T Consensus       208 -----------------~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  268 (368)
T d1mdah_         208 -----------------GAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM  268 (368)
T ss_dssp             -----------------TTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred             -----------------cccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCcee
Confidence                             0011112234444444433332  3334444444332222111111          0111234


Q ss_pred             EEECCCCCEEEEeeCC---------CcEEEEEcCCcceEEEEeecCCceEEEEEccCCCE--EEEecCCC
Q psy17188        445 LAISPDSKVCFSCCSD---------GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK--LWTGGLDN  503 (504)
Q Consensus       445 l~~s~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~--l~s~s~Dg  503 (504)
                      ++++++++.++....+         ..|.+||..+++.+..+.. ...+.+++|+|||+.  +++++.|+
T Consensus       269 ~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~  337 (368)
T d1mdah_         269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTE  337 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTT
T ss_pred             EEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCC
Confidence            6889998887765432         3599999999999888763 457889999999973  34555565

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.7e-12  Score=117.73  Aligned_cols=353  Identities=14%  Similarity=0.129  Sum_probs=199.1

Q ss_pred             EEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec---------CCCcEEEEeCCC
Q psy17188        120 TISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG---------EASNLSIWDLAS  190 (504)
Q Consensus       120 ~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---------~dg~i~iw~~~~  190 (504)
                      .|.+++.++....+|.|.+||+.++.....+....  -..-.+....||||+++++...         ..+.+.++|+.+
T Consensus        23 ~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~  100 (465)
T d1xfda1          23 KWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKK--IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (465)
T ss_dssp             CBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTT--TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             EEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCcc--ccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence            46677777766668899999998764322221111  1233577889999999988763         356789999998


Q ss_pred             CCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-CCCC-----------------eEEEE
Q psy17188        191 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDG-----------------ASCID  252 (504)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~-----------------v~~~~  252 (504)
                      ++.............+....|||||+.||... ++.|.+.+..++..++.... ..+.                 -..+.
T Consensus       101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~  179 (465)
T d1xfda1         101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHW  179 (465)
T ss_dssp             CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEE
T ss_pred             CceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEE
Confidence            76543333333344556688999999998875 56788988877765544432 1111                 24678


Q ss_pred             EccCCCEEEEEcCC-CeEEEEECCC------Cc-----------------eEEEeecCCCCCCC-cccceecccCCceEE
Q psy17188        253 ISADGTKLWTGGLD-NTVRSWDLRE------GC-----------------VKVWDISQPGSKTP-VSQLDCLQRDNYIRS  307 (504)
Q Consensus       253 ~~~~~~~l~s~~~d-g~i~~wd~~~------~~-----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~  307 (504)
                      |+|||++|+....| ..+..+.+..      ..                 +.++++........ ............+..
T Consensus       180 WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~  259 (465)
T d1xfda1         180 WSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITM  259 (465)
T ss_dssp             ECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEE
T ss_pred             ECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeee
Confidence            99999999987543 3333333211      01                 11222211110000 000011122335778


Q ss_pred             EEEcCCCCEEEEEeC-C---CcEEEEeCCCCCccceeeeccCCCc----eeeEEECCCCCCceeeecc-CC--CeEEEEe
Q psy17188        308 VKLLPDGRTLIVGGE-A---SNLSIWDLASPTPRIKAELTSSAPA----CYALAISPDSKSPFFSSHH-YK--SCVKVWD  376 (504)
Q Consensus       308 ~~~~~~~~~l~~~~~-d---g~i~v~d~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~-~~--~~i~i~d  376 (504)
                      +.|+++++.++.... +   ..+.++|..+++......... ...    -....|+++++..+++..+ .+  +.+..++
T Consensus       260 ~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~-~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~  338 (465)
T d1xfda1         260 VKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES-EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHIT  338 (465)
T ss_dssp             EEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC-SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEE
T ss_pred             eEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcC-CceEeccCCceeEccCCCeeEEEEeeeecccCceEEEE
Confidence            999999986665432 2   247888988876544433222 111    2356789999875554322 22  2344443


Q ss_pred             cCCCC---CCCcccccccccCCCceEEE-EEcCCCCEEEE-eeCCC--cEEEee--CCCCCcceeec-ccCCCCceeEEE
Q psy17188        377 ISQPG---SKTPVSQLDCLQRDNYIRSV-KLLPDGRTLIV-GGEAS--NLSIWD--LASPTPRIKAE-LTSSAPACYALA  446 (504)
Q Consensus       377 ~~~~~---~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~~-~~~dg--~i~iwd--~~~~~~~~~~~-~~~~~~~v~~l~  446 (504)
                      +....   .......+  ....-.|..+ +|+++++.|+. +..++  .-++|.  +.......... ..........+.
T Consensus       339 ~~~~~~~~~~~~~~~L--T~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~  416 (465)
T d1xfda1         339 VSSSQPNSSNDNIQSI--TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSAS  416 (465)
T ss_dssp             EECSSCCSSSCCCCBS--CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEE
T ss_pred             eccccccCCCceeEEe--ccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEE
Confidence            32111   11111111  1223445554 68888877654 43332  334444  44332221111 112233456779


Q ss_pred             ECCCCCEEEEeeCC---CcEEEEEcCCcceEEEEe
Q psy17188        447 ISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQ  478 (504)
Q Consensus       447 ~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~  478 (504)
                      |||++++++..+..   -.+.+++..+++.+..+.
T Consensus       417 ~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le  451 (465)
T d1xfda1         417 FSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLE  451 (465)
T ss_dssp             ECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEE
T ss_pred             ECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEc
Confidence            99999999854432   468899999999888876

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.54  E-value=8.2e-12  Score=113.17  Aligned_cols=301  Identities=10%  Similarity=0.018  Sum_probs=164.5

Q ss_pred             CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEEC
Q psy17188        133 KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAIS  212 (504)
Q Consensus       133 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (504)
                      .+.|.++.++.....-.+...........+..|+|+|++++|.++.. +.+..|.+....................+.++
T Consensus        13 ~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~   91 (365)
T d1jofa_          13 PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDAD   91 (365)
T ss_dssp             SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEEC
Confidence            45666655544321111111122234556778999999999988754 56888877643322111111112223456778


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCC
Q psy17188        213 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTP  292 (504)
Q Consensus       213 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~  292 (504)
                      ++++.++....+                  .+...|....+.+++........+...++...    .             
T Consensus        92 ~~~~~~~v~~a~------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------  136 (365)
T d1jofa_          92 TNTRAIFLLAAK------------------QPPYAVYANPFYKFAGYGNVFSVSETGKLEKN----V-------------  136 (365)
T ss_dssp             SCCEEEEEEECS------------------STTCCEEEEEESSSCCEEEEEEECTTCCEEEE----E-------------
T ss_pred             CCCCEEEEEEec------------------CCCCEEEEeEccCCCCcceeEeeeecceecCc----c-------------
Confidence            888754332211                  12223333334333332221111111111100    0             


Q ss_pred             cccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccc-eee--eccCCCceeeEEECCCCCCceeeeccC
Q psy17188        293 VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRI-KAE--LTSSAPACYALAISPDSKSPFFSSHHY  368 (504)
Q Consensus       293 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~-~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~  368 (504)
                        .....+....+.++.|+|+|++++++.. ...|.+|+........ ...  ..........++|+|+++. ++++...
T Consensus       137 --~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~-~yv~~e~  213 (365)
T d1jofa_         137 --QNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY-LYALMEA  213 (365)
T ss_dssp             --EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE-EEEEETT
T ss_pred             --cCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCce-EEEeccC
Confidence              0111122345789999999998888764 3468888765432221 111  1223457889999999986 6677788


Q ss_pred             CCeEEEEecCCCCCCCcccc--------------cccccCCCceEEEEEcCCCCEEEEeeC------CCcEEEeeCCCCC
Q psy17188        369 KSCVKVWDISQPGSKTPVSQ--------------LDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLASPT  428 (504)
Q Consensus       369 ~~~i~i~d~~~~~~~~~~~~--------------~~~~~~~~~i~~~~~s~~g~~l~~~~~------dg~i~iwd~~~~~  428 (504)
                      ++.|.+|++...........              ............+.++|||++|+++..      .+.|..|++....
T Consensus       214 ~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g  293 (365)
T d1jofa_         214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG  293 (365)
T ss_dssp             TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred             CCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCC
Confidence            99999999876432211110              011122234567899999999988743      2237777776432


Q ss_pred             ccee----ecccCCCCceeEEEECC-CCCEEEEee-CCCcEEEEEcCCcc
Q psy17188        429 PRIK----AELTSSAPACYALAISP-DSKVCFSCC-SDGNIAVWDLHNQT  472 (504)
Q Consensus       429 ~~~~----~~~~~~~~~v~~l~~s~-~~~~l~s~~-~dg~i~iwd~~~~~  472 (504)
                      ....    ............++++| +|++|+++. .++.|.+|+++...
T Consensus       294 ~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         294 SIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             CEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             ceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence            2211    11122233456679998 899887664 57899999886543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.43  E-value=4.5e-10  Score=98.75  Aligned_cols=249  Identities=11%  Similarity=0.071  Sum_probs=165.0

Q ss_pred             eeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEEC
Q psy17188        153 LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  232 (504)
Q Consensus       153 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~  232 (504)
                      +........+..++++|||+++++...+++|+.|+....    ...+......+.+++|.+||+++++...++.+..|+.
T Consensus        21 ~~~~p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~----~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~   96 (302)
T d2p4oa1          21 ITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN----QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL   96 (302)
T ss_dssp             EEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             EEECCCCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC----EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEe
Confidence            333344456889999999999999988999988886542    2334455567899999999999998888888888876


Q ss_pred             CCC--eEEEee-cCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE
Q psy17188        233 HNQ--TLVRQF-QGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK  309 (504)
Q Consensus       233 ~~~--~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  309 (504)
                      ...  ...... .........+.+.++++++++-+.++.+..++...+...++.........     ...........+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ngi~  171 (302)
T d2p4oa1          97 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS-----NSESVFPAANGLK  171 (302)
T ss_dssp             ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS-----STTCCSCSEEEEE
T ss_pred             cccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCcccee-----eccCccccccccc
Confidence            532  221111 12455688999999999999989999999999998876655433221111     1112223345666


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc
Q psy17188        310 LLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL  389 (504)
Q Consensus       310 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~  389 (504)
                      ++. +..+++.+..+.|..++.....................+++.+++.  ++++...++.|..++....  ...+  .
T Consensus       172 ~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~--l~va~~~~~~V~~i~p~G~--~~~~--~  244 (302)
T d2p4oa1         172 RFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN--LYGATHIYNSVVRIAPDRS--TTII--A  244 (302)
T ss_dssp             EET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC--EEEECBTTCCEEEECTTCC--EEEE--E
T ss_pred             ccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCC--EEEEEcCCCcEEEECCCCC--EEEE--E
Confidence            653 3445556777888888887654333333323344567899999998  7777777888888865431  1111  1


Q ss_pred             ccccCCCceEEEEE---cCCCCEEEEeeCCC
Q psy17188        390 DCLQRDNYIRSVKL---LPDGRTLIVGGEAS  417 (504)
Q Consensus       390 ~~~~~~~~i~~~~~---s~~g~~l~~~~~dg  417 (504)
                      .....-...++++|   ++|++.|++++..+
T Consensus       245 ~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~g  275 (302)
T d2p4oa1         245 QAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  275 (302)
T ss_dssp             CGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             ecCCCCCCceEEEEcCCCCCCCEEEEECCCC
Confidence            11123345789999   67888887765543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.42  E-value=1.4e-10  Score=102.20  Aligned_cols=247  Identities=10%  Similarity=0.076  Sum_probs=159.8

Q ss_pred             CCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC
Q psy17188        234 NQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD  313 (504)
Q Consensus       234 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  313 (504)
                      ..+.+..+.. ...+..+++.|||+++++...+++|..|+......                 ........+.+++|+++
T Consensus        17 ~~~v~~~~p~-~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~-----------------~~~~~~~~~~gla~~~d   78 (302)
T d2p4oa1          17 PAKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-----------------IHATVEGKVSGLAFTSN   78 (302)
T ss_dssp             CEEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-----------------EEEECSSEEEEEEECTT
T ss_pred             cccEEEECCC-CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE-----------------EEEcCCCCcceEEEcCC
Confidence            3445555542 33588999999999999999999999999765432                 12234466899999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCccceee-eccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcc-----c
Q psy17188        314 GRTLIVGGEASNLSIWDLASPTPRIKAE-LTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPV-----S  387 (504)
Q Consensus       314 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~-----~  387 (504)
                      |+++++...++.+..++........... ..........+++.+++.  ++++...++.+..++..........     .
T Consensus        79 G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~--~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~  156 (302)
T d2p4oa1          79 GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ--YLTADSYRGAIWLIDVVQPSGSIWLEHPMLA  156 (302)
T ss_dssp             SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE--EEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred             CCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCC--EEeeccccccceeeeccCCcceeEecCCccc
Confidence            9999988888888888876543332222 122344678899999987  7777777888888876653211000     0


Q ss_pred             ccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        388 QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       388 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      .............+.++. +.++++.+..+.|+.++.....................++++++|+++++...++.|..++
T Consensus       157 ~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~  235 (302)
T d2p4oa1         157 RSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA  235 (302)
T ss_dssp             CSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred             eeeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence            001111223345666654 3345556677888888877543322222111223345679999999888888899999998


Q ss_pred             cCCcceEEE--EeecCCceEEEEE---ccCCCEEEEecCC
Q psy17188        468 LHNQTLVRQ--FQGHTDGASCIDI---SADGTKLWTGGLD  502 (504)
Q Consensus       468 ~~~~~~~~~--~~~h~~~v~~~~~---s~d~~~l~s~s~D  502 (504)
                      .. ++....  ....-...++++|   ++|++.|+.++..
T Consensus       236 p~-G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         236 PD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             TT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CC-CCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence            65 333222  2233356899999   7788988766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.41  E-value=2.2e-10  Score=103.62  Aligned_cols=285  Identities=9%  Similarity=0.048  Sum_probs=156.7

Q ss_pred             EEEec--CCCcEEEEeCCCCCccce--ee-eecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEee-cCCCC
Q psy17188        174 LIVGG--EASNLSIWDLASPTPRIK--AE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQF-QGHTD  246 (504)
Q Consensus       174 l~~~~--~dg~i~iw~~~~~~~~~~--~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~-~~h~~  246 (504)
                      |++|+  ..+.|..+.++.......  .. .......+..|+|++++++|++... +.+..|.+.. +...... .....
T Consensus         5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCC
Confidence            55554  345676666554433221  11 1223444567999999999988765 5677776653 2222221 11223


Q ss_pred             CeEEEEEccCCCEEEE--EcC-CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        247 GASCIDISADGTKLWT--GGL-DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s--~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      ....+.++++++.++.  +.. .+.+..+                                    .+.+++........+
T Consensus        84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~------------------------------------~~~~~~~~~~~~~~~  127 (365)
T d1jofa_          84 HPRANDADTNTRAIFLLAAKQPPYAVYAN------------------------------------PFYKFAGYGNVFSVS  127 (365)
T ss_dssp             SGGGGCTTSCCEEEEEEECSSTTCCEEEE------------------------------------EESSSCCEEEEEEEC
T ss_pred             CcEEEEECCCCCEEEEEEecCCCCEEEEe------------------------------------EccCCCCcceeEeee
Confidence            4556677787774332  221 2333333                                    222322222111111


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEE
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKL  403 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~  403 (504)
                      ....+..      ............+.++.++|+++. +++.......|.+|+........................++|
T Consensus       128 ~~~~~~~------~~~~~~~q~~~h~h~v~~sPdG~~-l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f  200 (365)
T d1jofa_         128 ETGKLEK------NVQNYEYQENTGIHGMVFDPTETY-LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM  200 (365)
T ss_dssp             TTCCEEE------EEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred             ecceecC------cccCcccCCCCcceEEEECCCCCE-EEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEE
Confidence            1111100      000011112335789999999996 444445566888888765443333333333334567889999


Q ss_pred             cCCCCEEEEee-CCCcEEEeeCCCCCcceeecc-----------------cCCCCceeEEEECCCCCEEEEeeC------
Q psy17188        404 LPDGRTLIVGG-EASNLSIWDLASPTPRIKAEL-----------------TSSAPACYALAISPDSKVCFSCCS------  459 (504)
Q Consensus       404 s~~g~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----------------~~~~~~v~~l~~s~~~~~l~s~~~------  459 (504)
                      +|+++++++.. .+++|.+|++...+.......                 .........+.++|||++|+++..      
T Consensus       201 ~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~  280 (365)
T d1jofa_         201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL  280 (365)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred             CCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCcc
Confidence            99999887665 467899999876553322111                 011223457899999999987743      


Q ss_pred             CCcEEEEEcCCcceEEEEe------ecCCceEEEEEcc-CCCEEEEecCC
Q psy17188        460 DGNIAVWDLHNQTLVRQFQ------GHTDGASCIDISA-DGTKLWTGGLD  502 (504)
Q Consensus       460 dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~s~-d~~~l~s~s~D  502 (504)
                      .+.|..|++.....+....      .......+++++| +|++|+++..+
T Consensus       281 ~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~  330 (365)
T d1jofa_         281 QGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ  330 (365)
T ss_dssp             CCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred             ceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCC
Confidence            2337777776533222111      1223467899998 89998887654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=1.8e-10  Score=99.64  Aligned_cols=236  Identities=13%  Similarity=0.110  Sum_probs=143.5

Q ss_pred             cEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCC---eEEEEECCCCceEEEeecCCCCCCCcccceecccC
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDN---TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRD  302 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (504)
                      .|.|.|.+..... .+..+...+...+|+|||+.||....+.   .+.+.+...+..                .......
T Consensus        20 ~l~i~d~dG~~~~-~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~   82 (269)
T d2hqsa1          20 ELRVSDYDGYNQF-VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV----------------RQVASFP   82 (269)
T ss_dssp             EEEEEETTSCSCE-EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----------------EEEECCS
T ss_pred             EEEEEcCCCCCcE-EEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce----------------eEEeeee
Confidence            4777776644433 3334677788999999999998765443   466677776653                2334455


Q ss_pred             CceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCe--EEEEecCC
Q psy17188        303 NYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSC--VKVWDISQ  379 (504)
Q Consensus       303 ~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--i~i~d~~~  379 (504)
                      .......|+|+|+.++.... ++...++...... .................+++++.. .+.+...++.  +...++..
T Consensus        83 ~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~i~~~~~~~  160 (269)
T d2hqsa1          83 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQIRQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNING  160 (269)
T ss_dssp             SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CCEEECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTS
T ss_pred             cccccceecCCCCeeeEeeecCCccceeeccccc-ccceeeeecccccccccccccccc-ceecccccCCceEeeeeccc
Confidence            66788999999998887654 3333333222221 122222233334455667777765 3344444444  44445443


Q ss_pred             CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCC-c--EEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEE
Q psy17188        380 PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-N--LSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFS  456 (504)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s  456 (504)
                      ....      .............|+|+++.++..+.++ .  +.+.+...+..  ..  ...........|+|||++|+.
T Consensus       161 ~~~~------~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~--~~~~~~~~~p~~SPDG~~i~f  230 (269)
T d2hqsa1         161 GAPQ------RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QV--LSSTFLDETPSLAPNGTMVIY  230 (269)
T ss_dssp             SCCE------ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EE--CCCSSSCEEEEECTTSSEEEE
T ss_pred             ccce------eeecccccccccccccccceeEEEeecCCceeeeEeecccccc--eE--eecCccccceEECCCCCEEEE
Confidence            3211      1112345567889999999988776554 3  44555554332  21  122334567799999999986


Q ss_pred             eeC---CCcEEEEEcCCcceEEEEeecCCceEEEEEcc
Q psy17188        457 CCS---DGNIAVWDLHNQTLVRQFQGHTDGASCIDISA  491 (504)
Q Consensus       457 ~~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~  491 (504)
                      .+.   ...|+++++..+.. ..+....+.+...+|||
T Consensus       231 ~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         231 SSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             EEcCCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence            554   34688999976654 45666677788999998

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.36  E-value=5.4e-10  Score=95.84  Aligned_cols=239  Identities=10%  Similarity=0.016  Sum_probs=154.3

Q ss_pred             CCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  189 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  189 (504)
                      +.-.-..|+++++|++.++..  .+.+..++.....  ....   ..........++++++++++++....+.+++++..
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~--~~~~---~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~   86 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG--TTVL---PFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGS   86 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----C--EEEC---CCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTC
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCce--EEEe---ccCCccCceEEEEcCCCCEEEeeeeeceeeeeeec
Confidence            334458999999999776654  5777777655421  1111   11223446788999999987777666666666544


Q ss_pred             CCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeE
Q psy17188        190 SPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTV  269 (504)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i  269 (504)
                      +..  ..... .......++++.++++++++-..+..+..++..................++++.++++.+++...++.|
T Consensus        87 ~~~--~~~~~-~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i  163 (260)
T d1rwia_          87 NNQ--TVLPF-DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRV  163 (260)
T ss_dssp             SCC--EECCC-CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEE
T ss_pred             cce--eeeee-eeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccc
Confidence            332  12222 223457899999999887776667778887766544332222233456789999999988888888999


Q ss_pred             EEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        270 RSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       270 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                      ..++.+......+               ..........++++++|+++++....+.|..++......  .......-...
T Consensus       164 ~~~d~~~~~~~~~---------------~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~--~~~~~~~~~~P  226 (260)
T d1rwia_         164 VKLEAESNNQVVL---------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS--TVLPFTGLNTP  226 (260)
T ss_dssp             EEECTTTCCEEEC---------------CCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC--EECCCCSCCCE
T ss_pred             cccccccceeeee---------------eccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE--EEEccCCCCCe
Confidence            9999876543221               112234568899999999888887788888887654421  11112222456


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEec
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDI  377 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~  377 (504)
                      ..+++.+++.  ++++-..++.|+.++.
T Consensus       227 ~~i~~d~~g~--l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         227 LAVAVDSDRT--VYVADRGNDRVVKLTS  252 (260)
T ss_dssp             EEEEECTTCC--EEEEEGGGTEEEEECC
T ss_pred             EEEEEeCCCC--EEEEECCCCEEEEEeC
Confidence            7899999886  6777666777776654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.4e-09  Score=101.18  Aligned_cols=301  Identities=11%  Similarity=0.029  Sum_probs=163.7

Q ss_pred             cEEEEEEcCCCcEEEEec----------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEE
Q psy17188        115 VVCAVTISNPTKYVYTGG----------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  184 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~----------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  184 (504)
                      .+....||||+++|+...          .+.+.++|+.++... ++..  .......+....|||||+.||... ++.|.
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~-~l~~--~~~~~~~l~~~~wSPDG~~iafv~-~~nl~  137 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLDP--PEVSNAKLQYAGWGPKGQQLIFIF-ENNIY  137 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECCC--TTCCSCCCSBCCBCSSTTCEEEEE-TTEEE
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee-eccC--ccCCccccceeeeccCCceEEEEe-cceEE
Confidence            566788999999887653          367899999875421 1211  112344566789999999999885 67888


Q ss_pred             EEeCCCCCccceeeeecCcCc-----------------eEEEEECCCCCEEEEEeCC-Cc--------------------
Q psy17188        185 IWDLASPTPRIKAELTSSAPA-----------------CYALAISPDSKVCFSCCSD-GN--------------------  226 (504)
Q Consensus       185 iw~~~~~~~~~~~~~~~~~~~-----------------v~~~~~s~~~~~l~~~~~d-g~--------------------  226 (504)
                      +.+..++.... ....+....                 -.++.|||||++||....| ..                    
T Consensus       138 ~~~~~~~~~~~-lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~  216 (465)
T d1xfda1         138 YCAHVGKQAIR-VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY  216 (465)
T ss_dssp             EESSSSSCCEE-EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred             EEecCCCceEE-EecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeee
Confidence            88887654321 111121111                 1467899999999986532 22                    


Q ss_pred             -------------EEEEECCCCeEEEee------cCCCCCeEEEEEccCCCEEEEEc-CC---CeEEEEECCCCceEEEe
Q psy17188        227 -------------IAVWDLHNQTLVRQF------QGHTDGASCIDISADGTKLWTGG-LD---NTVRSWDLREGCVKVWD  283 (504)
Q Consensus       227 -------------i~iwd~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~-~d---g~i~~wd~~~~~~~~~~  283 (504)
                                   +.++|+.++......      .....-+..+.|.++++.++... ++   ..+.++|..++++....
T Consensus       217 ~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~  296 (465)
T d1xfda1         217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH  296 (465)
T ss_dssp             ECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred             eccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEE
Confidence                         344444433221111      11122367789999887555432 22   26888899998865432


Q ss_pred             ecCCCCCCCcccceecccCCceEEEEEcCCCCEEEE---EeCCC--cEEEEeCCC----CCccceeeeccCCCceeeE-E
Q psy17188        284 ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV---GGEAS--NLSIWDLAS----PTPRIKAELTSSAPACYAL-A  353 (504)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~---~~~dg--~i~v~d~~~----~~~~~~~~~~~~~~~i~~~-~  353 (504)
                      ....  ...+        ...-....|+++|+.++.   .-.+|  .++.+++..    ........+....-.|..+ .
T Consensus       297 ~e~~--~~wv--------~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~  366 (465)
T d1xfda1         297 EDES--EAWL--------HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA  366 (465)
T ss_dssp             EEEC--SSCC--------CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred             EEcC--CceE--------eccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEE
Confidence            1110  0000        001124568898875432   22333  344443221    1112222333334445554 6


Q ss_pred             ECCCCCCceeeeccCC-CeEEEEecCC--CCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC---CcEEEeeCCCC
Q psy17188        354 ISPDSKSPFFSSHHYK-SCVKVWDISQ--PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA---SNLSIWDLASP  427 (504)
Q Consensus       354 ~~~~~~~~~~~~~~~~-~~i~i~d~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d---g~i~iwd~~~~  427 (504)
                      +..+++.++|.+...+ ..-.+|.+..  ......+..  ..........+.|||++++++..+..   -.+.+++..++
T Consensus       367 ~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~--~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~  444 (465)
T d1xfda1         367 YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSC--DLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDK  444 (465)
T ss_dssp             EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSST--TSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTC
T ss_pred             EcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeecc--ccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCC
Confidence            8888887555443222 2334555543  222222211  11233346699999999998865443   34677776665


Q ss_pred             Cccee
Q psy17188        428 TPRIK  432 (504)
Q Consensus       428 ~~~~~  432 (504)
                      +.+..
T Consensus       445 ~~~~~  449 (465)
T d1xfda1         445 KKMFD  449 (465)
T ss_dssp             CEEEE
T ss_pred             CEEEE
Confidence            54433

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.31  E-value=8.7e-10  Score=94.53  Aligned_cols=243  Identities=11%  Similarity=0.003  Sum_probs=153.5

Q ss_pred             CCCCCCcceEEEECCCCCcccCCCCC-CcccCCCCCccccceeeecCCCcEEEEEEcCCCcEEEEec-CCeEEEEeCCCC
Q psy17188         67 GIPGGKPAYSYHVTTDGQMQPVPFPP-DALIGPGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQP  144 (504)
Q Consensus        67 ~~~~~~~v~~~~~s~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~  144 (504)
                      ++...-.+..+++.++|.+..+.... ..+...............+-......++++++++++++.. .+.+++++-.+.
T Consensus         9 ~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~   88 (260)
T d1rwia_           9 GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN   88 (260)
T ss_dssp             SCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred             cCCCcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccc
Confidence            33333456777888888765544433 3333333333333333332223456789999999888877 555655553332


Q ss_pred             CCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC
Q psy17188        145 GSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD  224 (504)
Q Consensus       145 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  224 (504)
                         ...   ..........++++.++++++++-..+..+..++....... ..... .......+++.++++++++...+
T Consensus        89 ---~~~---~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~-~~~~~-~~~~p~~i~~~~~g~~~v~~~~~  160 (260)
T d1rwia_          89 ---QTV---LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFT-GLNDPDGVAVDNSGNVYVTDTDN  160 (260)
T ss_dssp             ---CEE---CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE-ECCCC-SCCSCCEEEECTTCCEEEEEGGG
T ss_pred             ---eee---eeeeeeeecccccccccceeEeeccccccccccccccceee-eeeec-ccCCcceeeecCCCCEeeecccc
Confidence               111   11123456789999999998887766677877776553321 11112 22335689999999988888888


Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCc
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNY  304 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (504)
                      +.|..++.+.................+++.++|+++++....+.|..++.........               ....-..
T Consensus       161 ~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~---------------~~~~~~~  225 (260)
T d1rwia_         161 NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL---------------PFTGLNT  225 (260)
T ss_dssp             TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEEC---------------CCCSCCC
T ss_pred             ccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEE---------------ccCCCCC
Confidence            8899999876554443334556778999999998888888888898888765542211               1112245


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17188        305 IRSVKLLPDGRTLIVGGEASNLSIWDLA  332 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~dg~i~v~d~~  332 (504)
                      ...++++++|+++++-..++.|+.++..
T Consensus       226 P~~i~~d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         226 PLAVAVDSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             eEEEEEeCCCCEEEEECCCCEEEEEeCC
Confidence            6899999999877776667777766543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=1.7e-08  Score=86.83  Aligned_cols=236  Identities=16%  Similarity=0.118  Sum_probs=143.0

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      .|+|.|.+..+.   ..+..+...+...+|||||+.||......   .+.+.+...+..... ..+........|+|+|+
T Consensus        20 ~l~i~d~dG~~~---~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~   95 (269)
T d2hqsa1          20 ELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGS   95 (269)
T ss_dssp             EEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-ECCSSCEEEEEECTTSS
T ss_pred             EEEEEcCCCCCc---EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEE-eeeecccccceecCCCC
Confidence            577878775553   33344456688999999999998775543   477777776665444 44778889999999999


Q ss_pred             EEEEEcCC-Ce--EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCc--EEEEeCC
Q psy17188        259 KLWTGGLD-NT--VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASN--LSIWDLA  332 (504)
Q Consensus       259 ~l~s~~~d-g~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~--i~v~d~~  332 (504)
                      .++..... +.  +..+......                ...............+++++..++.. ..++.  |.+.++.
T Consensus        96 ~i~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~  159 (269)
T d2hqsa1          96 KLAFALSKTGSLNLYVMDLASGQ----------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN  159 (269)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCC----------------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             eeeEeeecCCccceeeccccccc----------------ceeeeeccccccccccccccccceecccccCCceEeeeecc
Confidence            88765532 22  2222222222                12222233334455677777655544 44554  5555555


Q ss_pred             CCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEE
Q psy17188        333 SPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIV  412 (504)
Q Consensus       333 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~  412 (504)
                      ...   ...............|+|+++. ++......+...+|...........     ...........|||||++|+.
T Consensus       160 ~~~---~~~~~~~~~~~~~~~~spdg~~-~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~p~~SPDG~~i~f  230 (269)
T d2hqsa1         160 GGA---PQRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQDLATGGVQV-----LSSTFLDETPSLAPNGTMVIY  230 (269)
T ss_dssp             SSC---CEECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEEETTTCCEEE-----CCCSSSCEEEEECTTSSEEEE
T ss_pred             ccc---ceeeecccccccccccccccce-eEEEeecCCceeeeEeecccccceE-----eecCccccceEECCCCCEEEE
Confidence            442   2233344557778899999996 3333444555555554433222111     123445567899999999886


Q ss_pred             eeCC---CcEEEeeCCCCCcceeecccCCCCceeEEEECC
Q psy17188        413 GGEA---SNLSIWDLASPTPRIKAELTSSAPACYALAISP  449 (504)
Q Consensus       413 ~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  449 (504)
                      .+..   ..|+++++..+....   +......+...+|||
T Consensus       231 ~s~~~~~~~l~~~~~dg~~~~~---lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         231 SSSQGMGSVLNLVSTDGRFKAR---LPATDGQVKFPAWSP  267 (269)
T ss_dssp             EEEETTEEEEEEEETTSCCEEE---CCCSSSEEEEEEECC
T ss_pred             EEcCCCCcEEEEEECCCCCEEE---EeCCCCcEEeEEeCC
Confidence            5543   358999998765432   333455677789998

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.29  E-value=4.5e-09  Score=90.97  Aligned_cols=239  Identities=11%  Similarity=0.173  Sum_probs=155.8

Q ss_pred             EEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeeeec----CCCCceEEEEEccCC-CEEEEe-cCCCcEEEEeC
Q psy17188        116 VCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCL----QRDNYIRSVKLLPDG-RTLIVG-GEASNLSIWDL  188 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~-~~l~~~-~~dg~i~iw~~  188 (504)
                      -..|+++++++++++-. ++.|++||.+. .   .+..+...    .....-..+++.++. ..+++. +.++.|..++.
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~G-~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKEG-R---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ  100 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTTS-C---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCCC-C---EEEEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence            47899999999888866 88999999653 1   11111111    112234456665543 344333 34556777775


Q ss_pred             CCCCccceeee-ecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEee--cCCCCCeEEEEEccCCCEEEEEcC
Q psy17188        189 ASPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       189 ~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                      .. +.  ...+ .........+++.+++.++++....+.+.+++. +++.+..+  ..+......+++.++++.+++...
T Consensus       101 ~g-~~--~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~  176 (279)
T d1q7fa_         101 YG-QF--VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR  176 (279)
T ss_dssp             TS-CE--EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred             cc-cc--eeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeecc
Confidence            43 21  2222 223445678999999998888777788888885 45666655  345677889999999988888888


Q ss_pred             CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCccceeeecc
Q psy17188        266 DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELTS  344 (504)
Q Consensus       266 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~  344 (504)
                      .+.|++||.....+..+              ...........++++++|+.+++-.. ++.|.+|+.. ++.........
T Consensus       177 ~~~V~~~d~~G~~~~~~--------------g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~~~~~~~~~~  241 (279)
T d1q7fa_         177 AHCVKVFNYEGQYLRQI--------------GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKV  241 (279)
T ss_dssp             GTEEEEEETTCCEEEEE--------------SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESS
T ss_pred             ccceeeeecCCceeeee--------------cccccccCCcccccccCCeEEEEECCCCcEEEEECCC-CCEEEEEeCCC
Confidence            99999999875543221              11123345788999999997766543 4469999853 33222222333


Q ss_pred             CCCceeeEEECCCCCCceeeeccCCCeEEEEecCCC
Q psy17188        345 SAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       345 ~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .......+++.+++.  ++++ ..++.|++|...+.
T Consensus       242 ~~~~p~~vav~~dG~--l~V~-~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         242 KHAQCFDVALMDDGS--VVLA-SKDYRLYIYRYVQL  274 (279)
T ss_dssp             CCSCEEEEEEETTTE--EEEE-ETTTEEEEEECSCC
T ss_pred             CCCCEeEEEEeCCCc--EEEE-eCCCeEEEEEeeee
Confidence            344678999999986  4544 46899999998753

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.28  E-value=9.2e-09  Score=89.00  Aligned_cols=242  Identities=15%  Similarity=0.197  Sum_probs=159.6

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC------CCCCeEEEEEccCCC-EEEE-EcCCCeEEEEECCCC
Q psy17188        206 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG------HTDGASCIDISADGT-KLWT-GGLDNTVRSWDLREG  277 (504)
Q Consensus       206 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~-~l~s-~~~dg~i~~wd~~~~  277 (504)
                      ...++++++++++++-..++.|++||.+ ++.+..+..      .......+++..+.. .+++ .+.++.|..++....
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~  103 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ  103 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccccc
Confidence            5789999999988777778899999954 666666532      122345566655433 3333 344567777776544


Q ss_pred             ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCC
Q psy17188        278 CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPD  357 (504)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~  357 (504)
                      ....+               ..........+++.++++.+++....+.+.+++.... .........+......+++.++
T Consensus       104 ~~~~~---------------~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~i~~d~~  167 (279)
T d1q7fa_         104 FVRKF---------------GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGVVVNDK  167 (279)
T ss_dssp             EEEEE---------------CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEEEECSS
T ss_pred             ceeec---------------CCCcccccceeccccCCcEEEEeeccceeeEeccCCc-eeecccccccccccceeeeccc
Confidence            32211               1122345778999999998888887788888886542 2222223345557788889888


Q ss_pred             CCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCCCCcceeeccc
Q psy17188        358 SKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTPRIKAELT  436 (504)
Q Consensus       358 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~  436 (504)
                      +.  ++++....+.|++||....    .+..+...........+++.++|+.+++-.. ++.|.+|+.. ++.+......
T Consensus       168 g~--i~v~d~~~~~V~~~d~~G~----~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~~~~~~~~~  240 (279)
T d1q7fa_         168 QE--IFISDNRAHCVKVFNYEGQ----YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESK  240 (279)
T ss_dssp             SE--EEEEEGGGTEEEEEETTCC----EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEES
T ss_pred             ee--EEeeeccccceeeeecCCc----eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC-CCEEEEEeCC
Confidence            87  7888888899999987532    1222222233445779999999997766443 4469999854 5544444334


Q ss_pred             CCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcc
Q psy17188        437 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT  472 (504)
Q Consensus       437 ~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~  472 (504)
                      ........+++.+||++++ ++.+.+|++|+.....
T Consensus       241 ~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         241 VKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             SCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred             CCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence            4444578899999997555 5678999999987654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.26  E-value=8.8e-09  Score=90.53  Aligned_cols=248  Identities=8%  Similarity=0.096  Sum_probs=155.3

Q ss_pred             ceEEEEECCCCCEEEEEeC-------CCcEEEEECCCCeEEEeecCC----CCCeEEEEEccCCCEEEEEcCCCeEEEEE
Q psy17188        205 ACYALAISPDSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGH----TDGASCIDISADGTKLWTGGLDNTVRSWD  273 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~dg~i~~wd  273 (504)
                      ....++|.++|+++++...       +++|..||..++.........    .+....+.|.++++.++++...+.+..++
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            3567899999997766432       467899998887654433221    23467899999999888888777899999


Q ss_pred             CCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC---------------CCcEEEEeCCCCCccc
Q psy17188        274 LREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---------------ASNLSIWDLASPTPRI  338 (504)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~v~d~~~~~~~~  338 (504)
                      ...+...+......+           ..-.....+++.++|++.++-..               .|.+..++....   .
T Consensus        99 ~~g~~~~~~~~~~~g-----------~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~---~  164 (314)
T d1pjxa_          99 TDGTFEEIAKKDSEG-----------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ---M  164 (314)
T ss_dssp             TTSCEEECCSBCTTS-----------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC---E
T ss_pred             CCCcEEEEEeccccc-----------cccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCc---e
Confidence            877653321111000           01123577899999987776422               233444443221   1


Q ss_pred             eeeeccCCCceeeEEECCCCCC---ceeeeccCCCeEEEEecCCCCCCCcccccccc--cCCCceEEEEEcCCCCEEEEe
Q psy17188        339 KAELTSSAPACYALAISPDSKS---PFFSSHHYKSCVKVWDISQPGSKTPVSQLDCL--QRDNYIRSVKLLPDGRTLIVG  413 (504)
Q Consensus       339 ~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--~~~~~i~~~~~s~~g~~l~~~  413 (504)
                      . ...........++|++++..   .++++....+.|..||+...............  ........+++.++|++.++.
T Consensus       165 ~-~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~  243 (314)
T d1pjxa_         165 I-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN  243 (314)
T ss_dssp             E-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred             e-EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEE
Confidence            1 11111223467889887642   25667778889999987644322111111110  112235689999999988887


Q ss_pred             eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEE-EEeeCCCcEEEEEcC
Q psy17188        414 GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLH  469 (504)
Q Consensus       414 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~  469 (504)
                      ...+.|.+||.+.+.........  ....++++|.||++.| ++.+.+|.|..+++.
T Consensus       244 ~~~g~I~~~dp~~g~~~~~i~~p--~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         244 WGSSHIEVFGPDGGQPKMRIRCP--FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             ETTTEEEEECTTCBSCSEEEECS--SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             cCCCEEEEEeCCCCEEEEEEECC--CCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            78899999998876654443332  3457889999999755 556677888887764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.25  E-value=2.6e-08  Score=87.82  Aligned_cols=237  Identities=11%  Similarity=0.069  Sum_probs=153.8

Q ss_pred             ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcC----CCeEEEEECCCCceE
Q psy17188        205 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGL----DNTVRSWDLREGCVK  280 (504)
Q Consensus       205 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----dg~i~~wd~~~~~~~  280 (504)
                      .+..++|.++|++.++-..++.|..|+.++++....+.........+++.+||+++++...    .+.+...+...+.+.
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            3468999999997777778889999998887766666556677899999999987776543    234555555555432


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCCccceeeeccCCCceeeEEE
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE------ASNLSIWDLASPTPRIKAELTSSAPACYALAI  354 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~  354 (504)
                      ..             .........+..+++.++|++.++...      .+.+..++.....   ...+...-.....++|
T Consensus       121 ~~-------------~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~---~~~~~~~~~~pnGia~  184 (319)
T d2dg1a1         121 DI-------------IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT---VTPIIQNISVANGIAL  184 (319)
T ss_dssp             EE-------------ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC---EEEEEEEESSEEEEEE
T ss_pred             ee-------------ccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce---eEEEeeccceeeeeee
Confidence            11             111122344678999999986665432      1235555544322   1111222234578999


Q ss_pred             CCCCCCceeeeccCCCeEEEEecCCCCCCCcccc---cccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        355 SPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQ---LDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       355 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      +|+++. ++++-...+.|..|++...........   ............+++.++|++.++....+.|.+||. .++.+.
T Consensus       185 s~dg~~-lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~  262 (319)
T d2dg1a1         185 STDEKV-LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIG  262 (319)
T ss_dssp             CTTSSE-EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEE
T ss_pred             ccccce-EEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEE
Confidence            999985 566677788999999875432221111   111112233567999999998888888999999996 466555


Q ss_pred             eeccc----CCCCceeEEEECCCCCEEEEeeC
Q psy17188        432 KAELT----SSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       432 ~~~~~----~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                      ...++    .+...+++++|.++...+++...
T Consensus       263 ~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         263 QILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             EEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            55544    33446789999998887776544

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.23  E-value=2e-08  Score=88.24  Aligned_cols=254  Identities=10%  Similarity=0.121  Sum_probs=155.9

Q ss_pred             cEEEEEEcCCCcEEEEec--------CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEE
Q psy17188        115 VVCAVTISNPTKYVYTGG--------KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW  186 (504)
Q Consensus       115 ~V~~v~~s~~~~~l~~~~--------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw  186 (504)
                      ..-.++|.++|+++++..        ++.|..||.+++... ...........+.-..++|.++++.|+++...+.|..+
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~-~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~   97 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV   97 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEE-EEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence            345678999999888754        356888887764211 11111111122346789999999988888777778888


Q ss_pred             eCCCCCccceeee-ecC-cCceEEEEECCCCCEEEEEeC---------------CCcEEEEECCCCeEEEeecCCCCCeE
Q psy17188        187 DLASPTPRIKAEL-TSS-APACYALAISPDSKVCFSCCS---------------DGNIAVWDLHNQTLVRQFQGHTDGAS  249 (504)
Q Consensus       187 ~~~~~~~~~~~~~-~~~-~~~v~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~  249 (504)
                      +.+.......... .+. -...+.+++.++|++.++-..               +|.|..++. +++...... .....+
T Consensus        98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~~~-~~~~pN  175 (314)
T d1pjxa_          98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQVDT-AFQFPN  175 (314)
T ss_dssp             ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEEEE-EESSEE
T ss_pred             eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEeeC-Ccceee
Confidence            8765432111110 111 112577999999987776432               233444443 333333222 334457


Q ss_pred             EEEEccCCC-----EEEEEcCCCeEEEEECCCC-ceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC
Q psy17188        250 CIDISADGT-----KLWTGGLDNTVRSWDLREG-CVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA  323 (504)
Q Consensus       250 ~~~~~~~~~-----~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  323 (504)
                      .++|+++++     ++++-+..+.|..||+... .+......        ..+ ..........+++..+|+..++....
T Consensus       176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~--------~~~-~~~~~~~pdGiavD~~GnlyVa~~~~  246 (314)
T d1pjxa_         176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVW--------GHI-PGTHEGGADGMDFDEDNNLLVANWGS  246 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEE--------EEC-CCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred             eeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEE--------EEc-cccccccceeeEEecCCcEEEEEcCC
Confidence            889998764     4455567788888886533 22100000        000 00112345689999999988887788


Q ss_pred             CcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC
Q psy17188        324 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK  383 (504)
Q Consensus       324 g~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~  383 (504)
                      +.|.+||.+.+...  ..+........+++|.|+++. ++++.+.++.|..+++.....+
T Consensus       247 g~I~~~dp~~g~~~--~~i~~p~~~~t~~afg~d~~~-lyVt~~~~g~i~~~~~~~~G~~  303 (314)
T d1pjxa_         247 SHIEVFGPDGGQPK--MRIRCPFEKPSNLHFKPQTKT-IFVTEHENNAVWKFEWQRNGKK  303 (314)
T ss_dssp             TEEEEECTTCBSCS--EEEECSSSCEEEEEECTTSSE-EEEEETTTTEEEEEECSSCBCC
T ss_pred             CEEEEEeCCCCEEE--EEEECCCCCEEEEEEeCCCCE-EEEEECCCCcEEEEECCCCChh
Confidence            99999998766433  333344457889999998865 6777778899999988765543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.20  E-value=2.3e-08  Score=88.19  Aligned_cols=234  Identities=12%  Similarity=0.075  Sum_probs=147.4

Q ss_pred             CCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeC--
Q psy17188        245 TDGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE--  322 (504)
Q Consensus       245 ~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--  322 (504)
                      ...+..++|.++|++.++-..++.|..|+..+++...+               ..........++++++|+++++...  
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~---------------~~~~~~~p~gla~~~dG~l~va~~~~~  103 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP---------------FVSHKANPAAIKIHKDGRLFVCYLGDF  103 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE---------------EECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEE---------------EeCCCCCeeEEEECCCCCEEEEecCCC
Confidence            34456899999999777777889999999887754321               1223345789999999998777643  


Q ss_pred             --CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccC------CCeEEEEecCCCCCCCcccccccccC
Q psy17188        323 --ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHY------KSCVKVWDISQPGSKTPVSQLDCLQR  394 (504)
Q Consensus       323 --dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~~~  394 (504)
                        .+.+...+.....................+++.++|.  ++++...      .+.+..++....  .  ....  ...
T Consensus       104 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~--l~vtd~~~~~~~~~g~v~~~~~dg~--~--~~~~--~~~  175 (319)
T d2dg1a1         104 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG--FYFTDFRGYSTNPLGGVYYVSPDFR--T--VTPI--IQN  175 (319)
T ss_dssp             SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC--EEEEECCCBTTBCCEEEEEECTTSC--C--EEEE--EEE
T ss_pred             ccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccc--eeecccccccccCcceeEEEecccc--e--eEEE--eec
Confidence              2335555555443222222222334567889999997  5554322      123443433221  1  1110  011


Q ss_pred             CCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCccee------ecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEE
Q psy17188        395 DNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIK------AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  467 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~------~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd  467 (504)
                      -...+.++|+||++.|+++ +..+.|+.|++........      ............+++.++|++.++....+.|.+||
T Consensus       176 ~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         176 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             cceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence            2234679999999876555 5578899998864322111      11112222356789999999888888899999999


Q ss_pred             cCCcceEEEEee------cCCceEEEEEccCCCEEEEecCC
Q psy17188        468 LHNQTLVRQFQG------HTDGASCIDISADGTKLWTGGLD  502 (504)
Q Consensus       468 ~~~~~~~~~~~~------h~~~v~~~~~s~d~~~l~s~s~D  502 (504)
                      - +|+.+.++..      +...+++++|.+++..|++...|
T Consensus       256 p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~  295 (319)
T d2dg1a1         256 K-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  295 (319)
T ss_dssp             T-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             C-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCC
Confidence            4 7888887763      33457899999988777765543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.89  E-value=1.2e-06  Score=75.83  Aligned_cols=222  Identities=14%  Similarity=0.176  Sum_probs=142.9

Q ss_pred             EEEEEccCCC-EEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEE
Q psy17188        249 SCIDISADGT-KLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLS  327 (504)
Q Consensus       249 ~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  327 (504)
                      -+..|++... +..+=-..+.|..||..+++...+.                 ....+.++++.++|+++++ +.+ .+.
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~-----------------~~~~~~~i~~~~dg~l~va-~~~-gl~   81 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-----------------LPFMGSALAKISDSKQLIA-SDD-GLF   81 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-----------------CSSCEEEEEEEETTEEEEE-ETT-EEE
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEE-----------------CCCCcEEEEEecCCCEEEE-EeC-ccE
Confidence            3456776444 4444446678999999988765432                 2345778899888876665 454 588


Q ss_pred             EEeCCCCCccceeeecc--CCCceeeEEECCCCCCceeeeccC----CCeEEEEecCCCCCCCcccccccccCCCceEEE
Q psy17188        328 IWDLASPTPRIKAELTS--SAPACYALAISPDSKSPFFSSHHY----KSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       328 v~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~  401 (504)
                      ++|..+++.........  ....+..+.+.|+|.  +.++...    .+.-.+|.+..+......      ..-...+.+
T Consensus        82 ~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~--iw~~~~~~~~~~~~g~l~~~~~g~~~~~~------~~~~~~Ng~  153 (295)
T d2ghsa1          82 LRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA--LWIGTMGRKAETGAGSIYHVAKGKVTKLF------ADISIPNSI  153 (295)
T ss_dssp             EEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC--EEEEEEETTCCTTCEEEEEEETTEEEEEE------EEESSEEEE
T ss_pred             EeecccceeeEEeeeecCCCcccceeeEECCCCC--EEEEeccccccccceeEeeecCCcEEEEe------eccCCccee
Confidence            99998876443333222  223577888999987  4443321    223445555433111111      112235689


Q ss_pred             EEcCCCCEEEEe-eCCCcEEEeeCCCCC------cceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceE
Q psy17188        402 KLLPDGRTLIVG-GEASNLSIWDLASPT------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  474 (504)
Q Consensus       402 ~~s~~g~~l~~~-~~dg~i~iwd~~~~~------~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  474 (504)
                      +|+++++.++.. +..+.|+.|++....      ................+++..+|++.++.-..+.|..|| .+|+.+
T Consensus       154 ~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~  232 (295)
T d2ghsa1         154 CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHI  232 (295)
T ss_dssp             EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEE
T ss_pred             eecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEe
Confidence            999999876554 456778888875321      111223334455677889999999888877788999999 578888


Q ss_pred             EEEeecCCceEEEEEc-cCCCEEEE
Q psy17188        475 RQFQGHTDGASCIDIS-ADGTKLWT  498 (504)
Q Consensus       475 ~~~~~h~~~v~~~~~s-~d~~~l~s  498 (504)
                      ..+.-....+++++|- +|.+.|+.
T Consensus       233 ~~i~lP~~~~T~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         233 ARYEVPGKQTTCPAFIGPDASRLLV  257 (295)
T ss_dssp             EEEECSCSBEEEEEEESTTSCEEEE
T ss_pred             eEecCCCCceEEEEEeCCCCCEEEE
Confidence            8888666779999996 67666653

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.86  E-value=6.9e-06  Score=70.85  Aligned_cols=229  Identities=13%  Similarity=0.088  Sum_probs=144.1

Q ss_pred             EEEEcC-CCcEEEEec-CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccc
Q psy17188        118 AVTISN-PTKYVYTGG-KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  195 (504)
Q Consensus       118 ~v~~s~-~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  195 (504)
                      ...|.+ ++++..+-- .+.|..||.+++.    ...+   .....+.++++.++++++++. . ..|.++|..+++...
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~----~~~~---~~~~~~~~i~~~~dg~l~va~-~-~gl~~~d~~tg~~~~   92 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGR----KTVH---ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTL   92 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTE----EEEE---ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEE
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCe----EEEE---ECCCCcEEEEEecCCCEEEEE-e-CccEEeecccceeeE
Confidence            355776 455555544 7899999988752    1111   234578899999998877664 4 458999998876443


Q ss_pred             eeeeec--CcCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEE-EEEcCCCe
Q psy17188        196 KAELTS--SAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKL-WTGGLDNT  268 (504)
Q Consensus       196 ~~~~~~--~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~  268 (504)
                      ......  ....++.+.+.|+|++.++...    .+.-.+|.+..++...... .-.....++|+++++.+ ++-+..+.
T Consensus        93 l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~  171 (295)
T d2ghsa1          93 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNR  171 (295)
T ss_dssp             EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCE
T ss_pred             EeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeecccce
Confidence            322222  1235788999999987666542    2345677777776655544 33456789999998855 45566788


Q ss_pred             EEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCc
Q psy17188        269 VRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPA  348 (504)
Q Consensus       269 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~  348 (504)
                      |..+++.......       ...................+++..+|++.++.-..+.|..||.. ++  ....+......
T Consensus       172 I~~~~~d~~~~~~-------~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-G~--~~~~i~lP~~~  241 (295)
T d2ghsa1         172 LMRVPLDARTGLP-------TGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN--HIARYEVPGKQ  241 (295)
T ss_dssp             EEEEEBCTTTCCB-------SSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC--EEEEEECSCSB
T ss_pred             eeEeeeccccccc-------ccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC-Cc--EeeEecCCCCc
Confidence            8888875322100       00000011122334567899999999987777778889999964 43  33334433457


Q ss_pred             eeeEEEC-CCCCCceeeec
Q psy17188        349 CYALAIS-PDSKSPFFSSH  366 (504)
Q Consensus       349 i~~~~~~-~~~~~~~~~~~  366 (504)
                      +++++|- ++.+.+++.++
T Consensus       242 ~T~~~FGG~d~~~LyvTta  260 (295)
T d2ghsa1         242 TTCPAFIGPDASRLLVTSA  260 (295)
T ss_dssp             EEEEEEESTTSCEEEEEEB
T ss_pred             eEEEEEeCCCCCEEEEEEC
Confidence            8899996 56666444444

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.79  E-value=6.4e-07  Score=77.12  Aligned_cols=95  Identities=17%  Similarity=0.146  Sum_probs=68.9

Q ss_pred             EEccC--CCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC-C-----CcEEEEECCCCeE
Q psy17188        166 KLLPD--GRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-D-----GNIAVWDLHNQTL  237 (504)
Q Consensus       166 ~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-----g~i~iwd~~~~~~  237 (504)
                      ..+||  |+.++..+ ++.|.+.|+.+++.   ..+..+...+...+|||||+.|+.... +     ..|.+++..+++.
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~---~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~   80 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST---RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI   80 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCE---EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCE---EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence            45788  99998875 46799999987763   446667777899999999998886542 2     2478888888876


Q ss_pred             EEeecC------CCCCeEEEEEccCCCEEEEEc
Q psy17188        238 VRQFQG------HTDGASCIDISADGTKLWTGG  264 (504)
Q Consensus       238 ~~~~~~------h~~~v~~~~~~~~~~~l~s~~  264 (504)
                      .+....      .........|+|+++.|+...
T Consensus        81 ~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          81 KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             EECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             EEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence            554321      123456788999999888754

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.72  E-value=9.4e-07  Score=76.02  Aligned_cols=113  Identities=11%  Similarity=0.087  Sum_probs=73.5

Q ss_pred             EEcCC--CcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecC----C--CcEEEEeCCCC
Q psy17188        120 TISNP--TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE----A--SNLSIWDLASP  191 (504)
Q Consensus       120 ~~s~~--~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d--g~i~iw~~~~~  191 (504)
                      ..||+  |+.++..+++.|.+.|+++++.    ..+.  .+.+.+...+|||||++||....    +  ..|.+++..++
T Consensus         5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~----~~Lt--~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g   78 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCCDDLWEHDLKSGST----RKIV--SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG   78 (281)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEETTTCCE----EEEE--CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred             ccCCCCCCCEEEEEeCCcEEEEECCCCCE----EEEe--cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence            35788  9999988888888889987532    2222  56677899999999999987532    2  24777777766


Q ss_pred             Cccceeee----ecCcCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEE
Q psy17188        192 TPRIKAEL----TSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLV  238 (504)
Q Consensus       192 ~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~  238 (504)
                      +.......    ...........|+|+++.|+.....      ..+...+...+...
T Consensus        79 ~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (281)
T d1k32a2          79 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV  135 (281)
T ss_dssp             EEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE
T ss_pred             ceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeE
Confidence            54322111    1122335678899999988875432      23555565555543

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.70  E-value=1.3e-05  Score=72.37  Aligned_cols=295  Identities=13%  Similarity=0.111  Sum_probs=151.3

Q ss_pred             eEEEEEccCCCEEEEecCCC-----------cEEEEeCCCCCccceeeee-cCcCceEEEEECCCCCEEEEEeCC-CcEE
Q psy17188        162 IRSVKLLPDGRTLIVGGEAS-----------NLSIWDLASPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSD-GNIA  228 (504)
Q Consensus       162 v~~~~~s~~~~~l~~~~~dg-----------~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-g~i~  228 (504)
                      +.......+|+.++.|+.+.           .+.+||..+++........ .+.......++.+++++++.|+.+ ..+.
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~  101 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  101 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCccee
Confidence            33444556788888776421           2779999987765433332 233334566788999999888765 5799


Q ss_pred             EEECCCCeEEEeecC-CCCCeEEEEEccCCCEEEEEcCC------CeEEEEECCCCceEEEeecCCCCCCCcccceeccc
Q psy17188        229 VWDLHNQTLVRQFQG-HTDGASCIDISADGTKLWTGGLD------NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQR  301 (504)
Q Consensus       229 iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (504)
                      +||..+.+-...-.. ....-...+..+|+++++.++.+      ..+.+||+.+.+...................... 
T Consensus       102 ~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-  180 (387)
T d1k3ia3         102 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR-  180 (387)
T ss_dssp             EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT-
T ss_pred             EecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceee-
Confidence            999988765432211 11223456677899998888753      3689999998875432111000000000000000 


Q ss_pred             CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCC----C--ceeeEEEC-CCCCCceeeeccCC-----
Q psy17188        302 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSA----P--ACYALAIS-PDSKSPFFSSHHYK-----  369 (504)
Q Consensus       302 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----~--~i~~~~~~-~~~~~~~~~~~~~~-----  369 (504)
                      ...-..+...++|+.++.+...+.+.+++..+.............    .  .-..+.+. .+++  +++.++..     
T Consensus       181 ~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--v~v~GG~~~~~~~  258 (387)
T d1k3ia3         181 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK--ILTFGGSPDYQDS  258 (387)
T ss_dssp             TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE--EEEECCBSSSSSS
T ss_pred             ccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCc--eEEEEeccCCCCC
Confidence            011112334457777777777777778877765432222111111    0  11122222 2232  34444321     


Q ss_pred             ---CeEEEEecCCCCCCC-cccccccccCCCceEEEEEcCCCCEEEEeeCCC-----------cEEEeeCCCCCcceeec
Q psy17188        370 ---SCVKVWDISQPGSKT-PVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS-----------NLSIWDLASPTPRIKAE  434 (504)
Q Consensus       370 ---~~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~  434 (504)
                         ....+.++....... .............-.+....+||+++++|+.+.           ++.+||..+.+......
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~  338 (387)
T d1k3ia3         259 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP  338 (387)
T ss_dssp             BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC
T ss_pred             cccceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCC
Confidence               123333333221111 111111111222233667778999999987531           47889987654332222


Q ss_pred             ccCCCCceeEEEECCCCCEEEEeeC
Q psy17188        435 LTSSAPACYALAISPDSKVCFSCCS  459 (504)
Q Consensus       435 ~~~~~~~v~~l~~s~~~~~l~s~~~  459 (504)
                      .......=....+.+||+.++.|+.
T Consensus       339 ~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         339 NSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCcccceEEEEECCCCEEEEEeCC
Confidence            2211110112346789999998874

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.49  E-value=0.00013  Score=68.82  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=51.3

Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCC-ceEEEEEccCCC-
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISADGT-  494 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~s~d~~-  494 (504)
                      |.|.-+|+++++.+...........   -.++-.+.++++++.||.++-+|.++|+.+.++.-... .-.-+.|..||+ 
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~---g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCc---ceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            4688888888877666544322111   01222467888899999999999999999988874322 112255666775 


Q ss_pred             EEEE
Q psy17188        495 KLWT  498 (504)
Q Consensus       495 ~l~s  498 (504)
                      |+++
T Consensus       521 Yi~v  524 (571)
T d2ad6a1         521 YIGS  524 (571)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.45  E-value=0.00025  Score=62.01  Aligned_cols=200  Identities=12%  Similarity=0.107  Sum_probs=123.1

Q ss_pred             EEEECC---CCCEEEEEe-CCCcEEEEECCCCeEEEeecC-CCCCeEEEEEcc--CCCEEEEEcCCC-------------
Q psy17188        208 ALAISP---DSKVCFSCC-SDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISA--DGTKLWTGGLDN-------------  267 (504)
Q Consensus       208 ~~~~s~---~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~--~~~~l~s~~~dg-------------  267 (504)
                      .+.+..   ||++|++.. .+.+|.+.|+++.+..+.+.. ....+..+...+  +-.+++..+.+.             
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~  168 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV  168 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence            456654   788888776 577899999999988665432 344567766654  445777766532             


Q ss_pred             -----eEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCC------------------
Q psy17188        268 -----TVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEAS------------------  324 (504)
Q Consensus       268 -----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------  324 (504)
                           .+.++|..+.++. |+               ..-......+.++++|+++++.+.+.                  
T Consensus       169 ~~y~~~~t~ID~~tm~V~-~Q---------------V~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~  232 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVA-WQ---------------VLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV  232 (459)
T ss_dssp             G-EEEEEEEEETTTTEEE-EE---------------EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred             hhcceEEEEEecCCceEE-EE---------------eeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEE
Confidence                 3567788776642 21               11223466789999999998876431                  


Q ss_pred             --------------------cEEEEeCCCCCc-cceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCC-
Q psy17188        325 --------------------NLSIWDLASPTP-RIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGS-  382 (504)
Q Consensus       325 --------------------~i~v~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-  382 (504)
                                          .+.+.|.+.... .....++. ......+.++|||+. +++++..+.++.++|++.-.. 
T Consensus       233 V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKy-i~VaGKLs~tVSViD~~Ki~~~  310 (459)
T d1fwxa2         233 VFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKH-LCVAGKLSPTVTVLDVTRFDAV  310 (459)
T ss_dssp             EEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSE-EEEECTTSSBEEEEEGGGHHHH
T ss_pred             EechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEec-CCCCCceEECCCCCE-EEEeCCcCCcEEEEEehhhhhh
Confidence                                123333332111 11111111 224567899999997 778888899999999863210 


Q ss_pred             ----CCc-ccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCC
Q psy17188        383 ----KTP-VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLA  425 (504)
Q Consensus       383 ----~~~-~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~  425 (504)
                          ... -.........-.....+|+.+|.-..+-.-|..|.-|++.
T Consensus       311 ~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         311 FYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             HHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred             hcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecc
Confidence                000 0001111223345678899888655566689999999984

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.41  E-value=0.00012  Score=68.88  Aligned_cols=79  Identities=14%  Similarity=0.220  Sum_probs=52.6

Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCC-
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGT-  494 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~-  494 (504)
                      |.|.-||+.+++.+.......+...   -.++-.+.++++++.||.++-+|.++|+++.+++..... -.-+.+..||+ 
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~g---g~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkq  514 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNG---GTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ  514 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCC---ceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            5677888888877766655443221   123335778889999999999999999999888743221 11245556775 


Q ss_pred             EEEE
Q psy17188        495 KLWT  498 (504)
Q Consensus       495 ~l~s  498 (504)
                      ||+.
T Consensus       515 yv~v  518 (560)
T d1kv9a2         515 YVAI  518 (560)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.38  E-value=0.00025  Score=63.52  Aligned_cols=279  Identities=15%  Similarity=0.102  Sum_probs=143.5

Q ss_pred             EEEEECCCCCEEEEEeCCC-----------cEEEEECCCCeEEEe---ecCCCCCeEEEEEccCCCEEEEEcCC-CeEEE
Q psy17188        207 YALAISPDSKVCFSCCSDG-----------NIAVWDLHNQTLVRQ---FQGHTDGASCIDISADGTKLWTGGLD-NTVRS  271 (504)
Q Consensus       207 ~~~~~s~~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~~  271 (504)
                      .......+++.++.|+.+.           .+.+||..+++-...   ...|.......++.+++++++.|+.+ ..+.+
T Consensus        23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~  102 (387)
T d1k3ia3          23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  102 (387)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeE
Confidence            3344456788777777421           267899988753221   12233344566788999998888765 58999


Q ss_pred             EECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCCccceeeeccC
Q psy17188        272 WDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA------SNLSIWDLASPTPRIKAELTSS  345 (504)
Q Consensus       272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~  345 (504)
                      ||..+.....              .........-...+..+||+.++.++.+      ..+.+||..+.+..........
T Consensus       103 yd~~~~~w~~--------------~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~  168 (387)
T d1k3ia3         103 YDSSSDSWIP--------------GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN  168 (387)
T ss_dssp             EEGGGTEEEE--------------CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred             ecCccCcccc--------------cccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCccc
Confidence            9999876432              1111122223467778899999988653      3589999887654322111100


Q ss_pred             -------C-----CceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCccccc---ccccCCCceEEEEE-cCCCCE
Q psy17188        346 -------A-----PACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQL---DCLQRDNYIRSVKL-LPDGRT  409 (504)
Q Consensus       346 -------~-----~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~~i~~~~~-s~~g~~  409 (504)
                             .     .....+...++++  ++..+.....+.+++.....-.......   ........-.++.+ ..+++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v  246 (387)
T d1k3ia3         169 PMLTADKQGLYRSDNHAWLFGWKKGS--VFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI  246 (387)
T ss_dssp             GGCCCCTTGGGTTTCSCCEEECGGGC--EEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE
T ss_pred             ccccccccceeeccceeEEEEeCCCC--EEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCce
Confidence                   0     0011122233444  4555666666666665543211000000   00000001112222 346777


Q ss_pred             EEEeeCCC--------cEEEeeCCCCCcc--eeeccc--CCCCceeEEEECCCCCEEEEeeCCC-----------cEEEE
Q psy17188        410 LIVGGEAS--------NLSIWDLASPTPR--IKAELT--SSAPACYALAISPDSKVCFSCCSDG-----------NIAVW  466 (504)
Q Consensus       410 l~~~~~dg--------~i~iwd~~~~~~~--~~~~~~--~~~~~v~~l~~s~~~~~l~s~~~dg-----------~i~iw  466 (504)
                      ++.|+...        ...+.++......  ......  .....-.+....+|+++++.|+.+.           .+.+|
T Consensus       247 ~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Y  326 (387)
T d1k3ia3         247 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIY  326 (387)
T ss_dssp             EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred             EEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEE
Confidence            77776422        2333333221111  111111  1111123446678999999988531           47889


Q ss_pred             EcCCcceEE--EEeecCCceEEEEEccCCCEEEEecC
Q psy17188        467 DLHNQTLVR--QFQGHTDGASCIDISADGTKLWTGGL  501 (504)
Q Consensus       467 d~~~~~~~~--~~~~h~~~v~~~~~s~d~~~l~s~s~  501 (504)
                      |.++.+-..  .+......=......+||+.|+.||.
T Consensus       327 dp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         327 VPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             EGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ECCCCeEEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            987764321  11100000122345799999999985

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.30  E-value=0.00012  Score=69.13  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=47.0

Q ss_pred             cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCce-EEEEEccCCC
Q psy17188        418 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISADGT  494 (504)
Q Consensus       418 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~s~d~~  494 (504)
                      .|.-||+.+++.+...........   =..+-.+.+|++|+.||.++.+|.++|+.+.+++...+.. .-+.|..||+
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~p~~g---g~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVSPWNG---GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cEEEeCCCCCceEeeecCCCCCCC---ceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            466677777666555443322110   0223367889999999999999999999998887432211 1144556776

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.29  E-value=0.00083  Score=63.47  Aligned_cols=79  Identities=10%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCC-
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGT-  494 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~-  494 (504)
                      |.|.-||..+++.+.........   ..=.++-.+.+++.|+.||.++-+|.++|+++.++...... -.-+.|..||+ 
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~---~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQ  529 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAV---WGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ  529 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCC---CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ceEEEEeCCCCceecccCCCCCC---ccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEE
Confidence            56888888888766554433221   11122335788889999999999999999999888743221 12244556775 


Q ss_pred             EEEE
Q psy17188        495 KLWT  498 (504)
Q Consensus       495 ~l~s  498 (504)
                      |++.
T Consensus       530 Yvav  533 (596)
T d1w6sa_         530 YVAI  533 (596)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.26  E-value=0.002  Score=60.80  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=53.6

Q ss_pred             CcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEEeecCCc-eEEEEEccCCC-
Q psy17188        417 SNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISADGT-  494 (504)
Q Consensus       417 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~s~d~~-  494 (504)
                      |.|.-+|+.+++.+.........   ..-.++..+.++++|+.||.++-+|.++|+++.+++-.... -.-+.+..||+ 
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~---~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q  542 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ  542 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCC---ccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            56888888888777665543321   11123346788889999999999999999999988743221 12256677885 


Q ss_pred             EEEE
Q psy17188        495 KLWT  498 (504)
Q Consensus       495 ~l~s  498 (504)
                      |++.
T Consensus       543 Yv~i  546 (582)
T d1flga_         543 YLGV  546 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.20  E-value=0.00099  Score=54.94  Aligned_cols=259  Identities=12%  Similarity=0.233  Sum_probs=155.9

Q ss_pred             CCCcEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCC
Q psy17188        179 EASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGT  258 (504)
Q Consensus       179 ~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  258 (504)
                      ...+|.|.|+..+....+......     +.-.+|..+.|+.-+ ..++.++|+++.+.++.+. ...+|.--.|-.+. 
T Consensus        43 ~~~~VvIidl~n~~~~~Rrpi~Ad-----sAIMhP~~~IiALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~~-  114 (327)
T d1utca2          43 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-  114 (327)
T ss_dssp             TEEEEEEEETTSTTSCEEEECCCS-----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEESSSS-
T ss_pred             CCceEEEEECCCCCcceecccchh-----hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEE-cCCCcEEEEecCCC-
Confidence            345799999987654333333222     345678888887766 5689999999999999888 45577667776544 


Q ss_pred             EEEEEcCCCeEEEEECCCCc--eEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q psy17188        259 KLWTGGLDNTVRSWDLREGC--VKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-------EASNLSIW  329 (504)
Q Consensus       259 ~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~v~  329 (504)
                      .|+-.+ +..|+-|+++...  .++++.            ........|..-..+++.++++..+       -.|.+.+|
T Consensus       115 ~L~lVT-~taVYHW~~~g~s~P~k~fdR------------~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLY  181 (327)
T d1utca2         115 TVALVT-DNAVYHWSMEGESQPVKMFDR------------HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY  181 (327)
T ss_dssp             EEEEEC-SSEEEEEESSSSCCCEEEEEC------------CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEc-CCceEEEcccCCCCchhhhhh------------cccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEE
Confidence            555544 4579999995432  222221            1111346677888888999877642       23678999


Q ss_pred             eCCCCCccceeeeccCCCceeeEEECCCCCC-ceee--e-ccCCCeEEEEecCCCCC-CCcc--cc----cccccCCCce
Q psy17188        330 DLASPTPRIKAELTSSAPACYALAISPDSKS-PFFS--S-HHYKSCVKVWDISQPGS-KTPV--SQ----LDCLQRDNYI  398 (504)
Q Consensus       330 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~--~-~~~~~~i~i~d~~~~~~-~~~~--~~----~~~~~~~~~i  398 (504)
                      ..+..   ....+++|...-..+.+..+... .+++  . +...+.+.+.++..... ....  +.    +.........
T Consensus       182 S~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFP  258 (327)
T d1utca2         182 SVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP  258 (327)
T ss_dssp             ETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCE
T ss_pred             EeccC---cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcE
Confidence            88764   44555565444433333322211 0121  1 12346888998876432 1111  11    1112234556


Q ss_pred             EEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCCcE
Q psy17188        399 RSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI  463 (504)
Q Consensus       399 ~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i  463 (504)
                      .++..++.-..++.-+.-|.|++||+.++..+........  .|...+-..+..-++....+|.|
T Consensus       259 vamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~--~iF~~a~~~~~~Gi~~VNr~GqV  321 (327)
T d1utca2         259 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQV  321 (327)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEETTTTEEEEEETTSEE
T ss_pred             EEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCC--ceEEeccCCCCceEEEECCCCeE
Confidence            6899999888999999999999999999987666554432  33322333333333444455544

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.19  E-value=0.00016  Score=63.17  Aligned_cols=262  Identities=12%  Similarity=0.142  Sum_probs=147.4

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEeecCC---------------------------------------CCCe--EEEEEcc
Q psy17188        217 VCFSCCSDGNIAVWDLHNQTLVRQFQGH---------------------------------------TDGA--SCIDISA  255 (504)
Q Consensus       217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h---------------------------------------~~~v--~~~~~~~  255 (504)
                      .+.+|+..|.|+|+-+.+++.+..+.-.                                       .+..  ..+.+..
T Consensus        15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~Td   94 (459)
T d1fwxa2          15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   94 (459)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEET
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccC
Confidence            3567888999999999888776654200                                       0111  1344433


Q ss_pred             ---CCCEEEEEc-CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc--CCCCEEEEEeCCC-----
Q psy17188        256 ---DGTKLWTGG-LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL--PDGRTLIVGGEAS-----  324 (504)
Q Consensus       256 ---~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg-----  324 (504)
                         ||++|+... .+.+|.+.|+++.++..              +........+..+...  |+..+++..++..     
T Consensus        95 GtyDGrylFVNDkan~RVAvIdl~~fkt~k--------------Ii~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pn  160 (459)
T d1fwxa2          95 GKYDGRFLFMNDKANTRVARVRCDVMKCDA--------------ILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVN  160 (459)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEE--------------EEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSC
T ss_pred             CccceeEEEEEcCCCceEEEEECcceeeeE--------------EEecCCCCCCceeecccCCCeEEEEccCccccccCC
Confidence               677776654 67899999999887531              1122333445555554  4556676665532     


Q ss_pred             -------------cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCC-------------eEEEEe--
Q psy17188        325 -------------NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKS-------------CVKVWD--  376 (504)
Q Consensus       325 -------------~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------~i~i~d--  376 (504)
                                   .+.++|..+.+.........   ....+.++++|++.++.+...+.             .+.+++  
T Consensus       161 dg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g---~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~  237 (459)
T d1fwxa2         161 DGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA  237 (459)
T ss_dssp             SSSSTTCGG-EEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred             CCccccchhhcceEEEEEecCCceEEEEeeeCC---ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechH
Confidence                         25667877664433333332   56789999999853222222111             133333  


Q ss_pred             ---------------------cCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeC-CCcEEEeeCCCCCc-----
Q psy17188        377 ---------------------ISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGE-ASNLSIWDLASPTP-----  429 (504)
Q Consensus       377 ---------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~iwd~~~~~~-----  429 (504)
                                           .+.........   ..........+.++|||+++++++. +.++.++|++.-..     
T Consensus       238 rie~av~~Gk~~eingV~VVD~~~~~~~~v~~---yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~  314 (459)
T d1fwxa2         238 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTR---YIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN  314 (459)
T ss_dssp             HHHHHHHHTCSEEETTEEEEECSGG--CSSEE---EEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred             HhHHhhhcCCcEEeCCceeecccccCCcceeE---EEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhccc
Confidence                                 22111111110   1111223447899999999887654 78899999863110     


Q ss_pred             -----ceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCc----------ceEEEEeecCCceEEE------E
Q psy17188        430 -----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----------TLVRQFQGHTDGASCI------D  488 (504)
Q Consensus       430 -----~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~h~~~v~~~------~  488 (504)
                           ....+.. ....-...+|..+|.-..+---|..|.-|++...          ..+.++.-|-. +-.+      .
T Consensus       315 ~~~~~~~~~e~e-lglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~-~gh~~~~~g~t  392 (459)
T d1fwxa2         315 ADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGET  392 (459)
T ss_dssp             C-GGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTS
T ss_pred             CCccccEEeecc-cCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccC-CCCCccCcCCc
Confidence                 0011111 1222345688888865556668999999998532          44555543322 2222      2


Q ss_pred             EccCCCEEEEec
Q psy17188        489 ISADGTKLWTGG  500 (504)
Q Consensus       489 ~s~d~~~l~s~s  500 (504)
                      ..|||++|++..
T Consensus       393 ~~~dgk~l~~~n  404 (459)
T d1fwxa2         393 LDATNDWLVCLS  404 (459)
T ss_dssp             TTCCSSEEEEEE
T ss_pred             CCCCCCEEEEec
Confidence            468999999864

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=0.0012  Score=55.27  Aligned_cols=249  Identities=9%  Similarity=-0.001  Sum_probs=146.1

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-cCCCeEEEEECCCCceEEEeecCCCCCCCccc
Q psy17188        217 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-GLDNTVRSWDLREGCVKVWDISQPGSKTPVSQ  295 (504)
Q Consensus       217 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~  295 (504)
                      +|+.+. ...|+-.++++.+....+. ....+.+++|++..+.|+-. ..++.|+..++......          ... .
T Consensus         3 fLl~s~-~~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~----------~~~-~   69 (266)
T d1ijqa1           3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----------SSY-D   69 (266)
T ss_dssp             EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------C-E
T ss_pred             EEEEEC-CCeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCC----------cce-E
Confidence            344443 3458888998765544444 45567899999877666554 34566766665432110          000 1


Q ss_pred             ceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEE
Q psy17188        296 LDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKV  374 (504)
Q Consensus       296 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i  374 (504)
                      .........+..+++.+.++.|... ...+.|.+.++....  ..............+++.|....+++.-.+..+.|..
T Consensus        70 ~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~--~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r  147 (266)
T d1ijqa1          70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK  147 (266)
T ss_dssp             EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred             EEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCCce--EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeE
Confidence            1112223456789998866666665 455689999987653  2233334445678899998777544444444556666


Q ss_pred             EecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEe-eCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCCE
Q psy17188        375 WDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKV  453 (504)
Q Consensus       375 ~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~  453 (504)
                      .++.........     ...-.....+++.+.++.|+.+ ...+.|...++....................+++.  +.+
T Consensus       148 ~~~dGs~~~~l~-----~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~  220 (266)
T d1ijqa1         148 GGLNGVDIYSLV-----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDK  220 (266)
T ss_dssp             EETTSCCEEEEE-----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTE
T ss_pred             eccCCCceeccc-----ccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCE
Confidence            666542211111     1223456789999988777766 45678999998765544443333333345566766  344


Q ss_pred             EE-EeeCCCcEEEEEcCCcceEEEEeecCCceEEE
Q psy17188        454 CF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI  487 (504)
Q Consensus       454 l~-s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~  487 (504)
                      |. +-..++.|+..+..+++....+......+..+
T Consensus       221 ly~td~~~~~I~~~~~~~g~~~~~~~~~~~~p~~i  255 (266)
T d1ijqa1         221 VFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM  255 (266)
T ss_dssp             EEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCE
T ss_pred             EEEEECCCCeEEEEECCCCcceEEEEcCCCCceEE
Confidence            44 44467888888888887777666544444444

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=0.0016  Score=54.49  Aligned_cols=230  Identities=9%  Similarity=0.037  Sum_probs=137.6

Q ss_pred             EEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec-CCCcEEEEeCCCCCc--cceeeeecCc
Q psy17188        127 YVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG-EASNLSIWDLASPTP--RIKAELTSSA  203 (504)
Q Consensus       127 ~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~--~~~~~~~~~~  203 (504)
                      +|..+....|+-.++++.... .+     ......+.++.|.+..+.|.... ..+.|.-.++.....  ..........
T Consensus         3 fLl~s~~~~I~~~~l~~~~~~-~~-----~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~   76 (266)
T d1ijqa1           3 YLFFTNRHEVRKMTLDRSEYT-SL-----IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI   76 (266)
T ss_dssp             EEEEECBSSEEEEETTSCCCE-EE-----ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             EEEEECCCeEEEEECCCCcce-ee-----eCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence            455555556888898764321 11     13455678999999888777664 456676666653221  1122233333


Q ss_pred             CceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEc--CCCeEEEEECCCCceE
Q psy17188        204 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGG--LDNTVRSWDLREGCVK  280 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~  280 (504)
                      ..+..+++.+.+..|+.+ ...+.|.+.+++.......+.........++++|...+|+...  ..+.|...++......
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~  156 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  156 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee
Confidence            446678887655555554 4567899999987765555555667789999998655555443  3456777777654432


Q ss_pred             EEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCC
Q psy17188        281 VWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK  359 (504)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  359 (504)
                      .              + ....-.....+++++.++.|+.+ ...+.|...++....................+++..  .
T Consensus       157 ~--------------l-~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~--~  219 (266)
T d1ijqa1         157 S--------------L-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--D  219 (266)
T ss_dssp             E--------------E-ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--T
T ss_pred             c--------------c-cccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEEC--C
Confidence            1              1 11223456889999988777766 556789988987654333333333333455666663  2


Q ss_pred             CceeeeccCCCeEEEEecCCC
Q psy17188        360 SPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       360 ~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      . ++.+-..++.|...+...+
T Consensus       220 ~-ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         220 K-VFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             E-EEEEETTTTEEEEEETTTC
T ss_pred             E-EEEEECCCCeEEEEECCCC
Confidence            2 5566556677776665543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=0.0023  Score=53.31  Aligned_cols=233  Identities=9%  Similarity=0.020  Sum_probs=139.3

Q ss_pred             CcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeCCCCCccceeeeecCc
Q psy17188        125 TKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSA  203 (504)
Q Consensus       125 ~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~  203 (504)
                      |.+|..+..+.|+-.+++...............+...+.+++|.+..+.|... ..++.|+..+++....  ...+....
T Consensus         1 ~~fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~--~~v~~~~~   78 (263)
T d1npea_           1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDL   78 (263)
T ss_dssp             CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTC
T ss_pred             CCEEEEeCCCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCc--EEEEEecc
Confidence            45677777778888888654333222222222334558889999877777765 4567788888876543  22233333


Q ss_pred             CceEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCC---CeEEEEECCCCce
Q psy17188        204 PACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLD---NTVRSWDLREGCV  279 (504)
Q Consensus       204 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~~wd~~~~~~  279 (504)
                      ..+.++++..-+..|+.+ ...+.|.+.+++.......+......+..+++.|...+|+.....   ..|..-+++....
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            457889997655555544 456789999988655433344344678899999976666544322   2344445544332


Q ss_pred             EEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCccceeeeccCCCceeeEEECCCC
Q psy17188        280 KVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDS  358 (504)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~  358 (504)
                      .              .+ ....-.....+++++.++.|+.. ...+.|...++........  ..... ....+++.  +
T Consensus       159 ~--------------~i-~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v--~~~~~-~P~~lav~--~  218 (263)
T d1npea_         159 R--------------IL-AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV--LEGLQ-YPFAVTSY--G  218 (263)
T ss_dssp             E--------------EE-ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE--EECCC-SEEEEEEE--T
T ss_pred             e--------------ee-eeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEE--ECCCC-CcEEEEEE--C
Confidence            1              11 11223456899999888877665 4567898888876533222  22222 34566665  2


Q ss_pred             CCceeeeccCCCeEEEEecCCC
Q psy17188        359 KSPFFSSHHYKSCVKVWDISQP  380 (504)
Q Consensus       359 ~~~~~~~~~~~~~i~i~d~~~~  380 (504)
                      .. ++.+-...+.|...|...+
T Consensus       219 ~~-lYwtd~~~~~I~~~~~~~g  239 (263)
T d1npea_         219 KN-LYYTDWKTNSVIAMDLAIS  239 (263)
T ss_dssp             TE-EEEEETTTTEEEEEETTTT
T ss_pred             CE-EEEEECCCCEEEEEECCCC
Confidence            22 5666666777777776543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=0.0067  Score=50.35  Aligned_cols=199  Identities=13%  Similarity=0.069  Sum_probs=122.1

Q ss_pred             CCCcEEEEEEcCCCcEEEEec--CCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEe-cCCCcEEEEeC
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG--KGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDL  188 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~  188 (504)
                      +...+.+++|....+.|.-..  ++.|+..+++.... ..+.  .  ..-..+.++++..-++.|..+ ...+.|.+.++
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~-~~v~--~--~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~  108 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTII--R--QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM  108 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEE--C--TTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCc-EEEE--E--eccccccEEEEeccCCeEEEeccCCCEEEEEec
Confidence            445678899998766665544  78899888875432 1111  1  223568899998766666544 45678999998


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCC-Cc--EEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEE-c
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-GN--IAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTG-G  264 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~  264 (504)
                      +.....  ............+++.|...+++..... +.  |.--+++...........-....++++.+.++.|+.+ .
T Consensus       109 dg~~~~--~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~  186 (263)
T d1npea_         109 DGTQRR--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA  186 (263)
T ss_dssp             TSCSCE--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred             CCceEE--EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeC
Confidence            865432  2223334567899999977766655432 23  4444555443333333344567899999877766554 5


Q ss_pred             CCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCC
Q psy17188        265 LDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVG-GEASNLSIWDLASPT  335 (504)
Q Consensus       265 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~  335 (504)
                      ..+.|...+++....+..             .   .......++++.  +..|+.. ...+.|...|..+++
T Consensus       187 ~~~~I~~~~~~g~~~~~v-------------~---~~~~~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         187 GTHRAECLNPAQPGRRKV-------------L---EGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             TTTEEEEEETTEEEEEEE-------------E---ECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred             CCCEEEEEECCCCCeEEE-------------E---CCCCCcEEEEEE--CCEEEEEECCCCEEEEEECCCCc
Confidence            677899899876654321             1   111224567765  3445444 456778888877653

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.66  E-value=0.0099  Score=55.60  Aligned_cols=316  Identities=15%  Similarity=0.096  Sum_probs=155.1

Q ss_pred             CCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEec------CCCcEEEEeCCCCCcccee
Q psy17188        124 PTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG------EASNLSIWDLASPTPRIKA  197 (504)
Q Consensus       124 ~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~  197 (504)
                      ++++++...|+.+.-.|.++++.......... .....++.--.-.++. ++.+.      .+|.|+-+|+.+++.....
T Consensus       115 ~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~-~~~~~~t~~p~v~~~~-vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  192 (571)
T d2ad6a1         115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDP-KVGSTLTQAPFVAKDT-VLMGCSGAELGVRGAVNAFDLKTGELKWRA  192 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCG-GGTCBCCSCCEEETTE-EEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEeCCCcEEeeehhhhhhhcccccccc-ccccceeecCeEeCCe-EEEeeccccccccCcEEEEECCCCcEEEEE
Confidence            45555555588888888887743222211110 0111111111111333 44443      3678999999988754432


Q ss_pred             eeecC-----------------------------------cCce-EEEEECCCCCEEEEEeC----------------CC
Q psy17188        198 ELTSS-----------------------------------APAC-YALAISPDSKVCFSCCS----------------DG  225 (504)
Q Consensus       198 ~~~~~-----------------------------------~~~v-~~~~~s~~~~~l~~~~~----------------dg  225 (504)
                      .....                                   ...+ ...++.++..+++.+..                ..
T Consensus       193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~  272 (571)
T d2ad6a1         193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM  272 (571)
T ss_dssp             ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred             eccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccccc
Confidence            21100                                   0111 12345566665555543                24


Q ss_pred             cEEEEECCCCeEEEeecCCCCCe---------EEEEEccCCC---EEEEEcCCCeEEEEECCCCceEEEeecCCCCC---
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTDGA---------SCIDISADGT---KLWTGGLDNTVRSWDLREGCVKVWDISQPGSK---  290 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~~v---------~~~~~~~~~~---~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~---  290 (504)
                      .+.-.|+++++.+..++.....+         ....+..+++   .++..+.+|.+.++|..+|+........+...   
T Consensus       273 svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~  352 (571)
T d2ad6a1         273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK  352 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred             ceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccc
Confidence            57888999999988776432221         2222233443   46788899999999999998653211111100   


Q ss_pred             -------CCcc------------cceeccc--CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCce
Q psy17188        291 -------TPVS------------QLDCLQR--DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPAC  349 (504)
Q Consensus       291 -------~~~~------------~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i  349 (504)
                             .++.            ...+...  ...-...+++|+...+++...+............ .     .......
T Consensus       353 ~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~-~-----~~~~~~~  426 (571)
T d2ad6a1         353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPY-R-----AGQFFVG  426 (571)
T ss_dssp             EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC-C-----TTSCCCC
T ss_pred             cccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccc-c-----CCccccc
Confidence                   0000            0000000  0011236778888888877665433332211110 0     0000011


Q ss_pred             eeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCc
Q psy17188        350 YALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  429 (504)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~  429 (504)
                      ..+...+...   .......|.+.-+|+.+++..-....      .....+-.++..+.++++|+.||.++.+|.++++.
T Consensus       427 ~~~~~~~~~~---~~~~~~~G~l~AiD~~TG~~~W~~~~------~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~  497 (571)
T d2ad6a1         427 ATLAMYPGPN---GPTKKEMGQIRAFDLTTGKAKWTKWE------KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE  497 (571)
T ss_dssp             EEEEEEECTT---STTSCCCEEEEEECTTTCCEEEEEEE------SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cceeeccccC---CcccCCcccEEEeccCCCceeeEcCC------CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcE
Confidence            1112211111   11122345677777776543221111      01111111222466888899999999999999999


Q ss_pred             ceeecccCCCCceeEEEECCCCC-EEEEe
Q psy17188        430 RIKAELTSSAPACYALAISPDSK-VCFSC  457 (504)
Q Consensus       430 ~~~~~~~~~~~~v~~l~~s~~~~-~l~s~  457 (504)
                      +....+...... .-+.+..||+ |+++.
T Consensus       498 lW~~~l~~~~~a-~P~ty~~dGkqYi~v~  525 (571)
T d2ad6a1         498 LWNFKMPSGGIG-SPMTYSFKGKQYIGSM  525 (571)
T ss_dssp             EEEEECSSCCCS-CCEEEEETTEEEEEEE
T ss_pred             EEEEECCCCcee-cceEEEECCEEEEEEE
Confidence            888776654322 1235555776 55443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.64  E-value=0.0024  Score=60.07  Aligned_cols=221  Identities=10%  Similarity=0.025  Sum_probs=106.6

Q ss_pred             cEEEEECCCCeEEEeecCCCC---------CeEEEEEccCC---CEEEEEcCCCeEEEEECCCCceEEEeecCCCCC---
Q psy17188        226 NIAVWDLHNQTLVRQFQGHTD---------GASCIDISADG---TKLWTGGLDNTVRSWDLREGCVKVWDISQPGSK---  290 (504)
Q Consensus       226 ~i~iwd~~~~~~~~~~~~h~~---------~v~~~~~~~~~---~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~---  290 (504)
                      .|.-.|+++++....++....         +........++   ..++.++.+|.+.++|..+|+........+...   
T Consensus       284 svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~  363 (573)
T d1kb0a2         284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG  363 (573)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             eEEEecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccc
Confidence            477788888888776653221         12222222333   357788899999999999998643221111000   


Q ss_pred             -----CC------------cccceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCC-ceeeE
Q psy17188        291 -----TP------------VSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAP-ACYAL  352 (504)
Q Consensus       291 -----~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~-~i~~~  352 (504)
                           ..            ............-..++++|+...+++...+....+......+............ .....
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  443 (573)
T d1kb0a2         364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA  443 (573)
T ss_dssp             ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred             cccccceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccc
Confidence                 00            0000000011112345788888888887766655555443322111000000000 00000


Q ss_pred             EECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCccee
Q psy17188        353 AISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIK  432 (504)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~~  432 (504)
                      .+ +.+   .-.....-|.+.-||+.+++..-....      ..+...-..+-.|.+|++|+.||.++.+|.++++.+..
T Consensus       444 ~~-~~~---~p~~~~~~G~l~AiD~~tGk~~W~~~~------~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~  513 (573)
T d1kb0a2         444 KF-FNA---EPPKSKPFGRLLAWDPVAQKAAWSVEH------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE  513 (573)
T ss_dssp             EE-ECS---SCCCSCCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cc-ccc---CCCCCCCcccEEEeCCCCCceEeeecC------CCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEE
Confidence            00 000   000001124555666655432211111      01111112333677888999999999999999999887


Q ss_pred             ecccCCCCceeEEEECCCCC-EEEEe
Q psy17188        433 AELTSSAPACYALAISPDSK-VCFSC  457 (504)
Q Consensus       433 ~~~~~~~~~v~~l~~s~~~~-~l~s~  457 (504)
                      ..+....... -+.|..||+ ||+..
T Consensus       514 ~~~~~~~~~~-P~ty~~~GkQYv~v~  538 (573)
T d1kb0a2         514 APTGTGVVAA-PSTYMVDGRQYVSVA  538 (573)
T ss_dssp             EECSSCCCSC-CEEEEETTEEEEEEE
T ss_pred             EECCCCcccc-CEEEEECCEEEEEEE
Confidence            7765432211 135555776 44443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.55  E-value=0.027  Score=50.60  Aligned_cols=233  Identities=11%  Similarity=0.038  Sum_probs=119.3

Q ss_pred             CeEEEEEccCCCEEEEE-cCC----CeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEe
Q psy17188        247 GASCIDISADGTKLWTG-GLD----NTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGG  321 (504)
Q Consensus       247 ~v~~~~~~~~~~~l~s~-~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  321 (504)
                      .+...+++||+++++.+ +.+    ..|+++|+.+++..-.                .-.......++|.++++.|+...
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~----------------~i~~~~~~~~~W~~D~~~~~Y~~  189 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD----------------VLERVKFSCMAWTHDGKGMFYNA  189 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE----------------EEEEECSCCEEECTTSSEEEEEE
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccc----------------ccccccccceEEcCCCCEEEEEE
Confidence            34556789999987743 222    3799999999984311                11111125688999999887654


Q ss_pred             CC----------------CcEEEEeCCCCCccceeeeccC--CCceeeEEECCCCCCceeeecc-CCCe--EEEEecCCC
Q psy17188        322 EA----------------SNLSIWDLASPTPRIKAELTSS--APACYALAISPDSKSPFFSSHH-YKSC--VKVWDISQP  380 (504)
Q Consensus       322 ~d----------------g~i~v~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~~~--i~i~d~~~~  380 (504)
                      .+                ..+..+.+.+............  ......+..+.+++.+++.+.. ....  +.+.|+...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~  269 (430)
T d1qfma1         190 YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE  269 (430)
T ss_dssp             CCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred             eccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCc
Confidence            32                2577777777644433333332  3345667788998864443332 2333  444454432


Q ss_pred             CCCCc--ccccccccCCCceEEEEEcCCCCEEEEeeC---CCcEEEeeCCCCCcce-eecccCCCCceeEEEECCCCCEE
Q psy17188        381 GSKTP--VSQLDCLQRDNYIRSVKLLPDGRTLIVGGE---ASNLSIWDLASPTPRI-KAELTSSAPACYALAISPDSKVC  454 (504)
Q Consensus       381 ~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~l~~s~~~~~l  454 (504)
                      .....  ....................++.+++....   ++.|...++....... ...+..+...+..-.+...+.+|
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~l  349 (430)
T d1qfma1         270 SNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL  349 (430)
T ss_dssp             SSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred             ccccccccceeEeecccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEE
Confidence            21110  000011111111112222223334443332   3567777776544321 22233334434433444445566


Q ss_pred             EEe-eCCC--cEEEEEcCCcceEEEEeecCCceEEEEEccCCCE
Q psy17188        455 FSC-CSDG--NIAVWDLHNQTLVRQFQGHTDGASCIDISADGTK  495 (504)
Q Consensus       455 ~s~-~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~d~~~  495 (504)
                      +.. -.++  .|+++++.+++.........+.|..+...++...
T Consensus       350 vl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~  393 (430)
T d1qfma1         350 VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTE  393 (430)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSE
T ss_pred             EEEEEcCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCE
Confidence            644 3554  5888999888776554444455555554454443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.53  E-value=0.0067  Score=56.71  Aligned_cols=217  Identities=10%  Similarity=0.061  Sum_probs=104.1

Q ss_pred             CcEEEEECCCCeEEEeecCCCCCeE---------EEEEccCCC---EEEEEcCCCeEEEEECCCCceEEEeecCCCC---
Q psy17188        225 GNIAVWDLHNQTLVRQFQGHTDGAS---------CIDISADGT---KLWTGGLDNTVRSWDLREGCVKVWDISQPGS---  289 (504)
Q Consensus       225 g~i~iwd~~~~~~~~~~~~h~~~v~---------~~~~~~~~~---~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~---  289 (504)
                      ..|.-.|+++++.+..++.....+.         -.....+++   .++.+..+|.+.++|..++++..-....+..   
T Consensus       270 ~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~  349 (560)
T d1kv9a2         270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE  349 (560)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred             eeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccccccccccccccc
Confidence            3577889999998877654322221         122222333   5778899999999999999864222111100   


Q ss_pred             ------CCCcc----------cceec--ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeeccCCCceee
Q psy17188        290 ------KTPVS----------QLDCL--QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYA  351 (504)
Q Consensus       290 ------~~~~~----------~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~i~~  351 (504)
                            .....          .....  .....-...+++|+...+++...+... ++................      
T Consensus       350 ~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~-~~~~~~~~~~~~~~~~~~------  422 (560)
T d1kv9a2         350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPG-VYRNEGKDFVTRKAFNTA------  422 (560)
T ss_dssp             EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCE-EECCCGGGCCCCSSCCCS------
T ss_pred             ccChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccc-eeeccccccccccccccc------
Confidence                  00000          00000  000111245677777777766544322 222111100000000000      


Q ss_pred             EEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCCCcce
Q psy17188        352 LAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI  431 (504)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~~~~~  431 (504)
                      ..+.+..   -.-.....+.+.-+|+.+++..-....      ......-.++-.+.++++|+.||.++.+|.++++.+.
T Consensus       423 ~~~~~~~---~~p~~~~~G~l~A~D~~tGk~~W~~~~------~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW  493 (560)
T d1kv9a2         423 AGFADAT---DVPAAVVSGALLAWDPVKQKAAWKVPY------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW  493 (560)
T ss_dssp             SCGGGCC---CCCGGGCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             cCccccc---CCCCcccccceEEEeCCCCeEeeeccC------CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeE
Confidence            0000000   011122235566666665432211111      1111111233356788899999999999999999988


Q ss_pred             eecccCCCCceeEEEECCCCC-EEEEee
Q psy17188        432 KAELTSSAPACYALAISPDSK-VCFSCC  458 (504)
Q Consensus       432 ~~~~~~~~~~v~~l~~s~~~~-~l~s~~  458 (504)
                      ...+...... .-+.+..||+ ||++.+
T Consensus       494 ~~~l~~~~~~-~P~ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         494 QFEAQSGIVA-APMTFELAGRQYVAIMA  520 (560)
T ss_dssp             EEECSSCCCS-CCEEEEETTEEEEEEEE
T ss_pred             EEECCCCccc-cCEEEEECCEEEEEEEe
Confidence            8776653321 1135556775 555443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.49  E-value=0.016  Score=54.48  Aligned_cols=68  Identities=19%  Similarity=0.313  Sum_probs=44.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEeecCCCCCe-EEEEEcc--CCCEEEEEcC------CCeEEEEECCCCceEEEee
Q psy17188        216 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SCIDISA--DGTKLWTGGL------DNTVRSWDLREGCVKVWDI  284 (504)
Q Consensus       216 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~~--~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~  284 (504)
                      ..++.++.|+.|.-.|.++++.+..+....... ..+.-.|  -+..++.+..      .|.|+-+|.++|++ +|..
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~-~W~~  198 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQ-VWRA  198 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCE-EEEE
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcE-EEEe
Confidence            468889999999999999999988875321100 0111111  1335555543      48999999999985 4543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.48  E-value=0.033  Score=49.95  Aligned_cols=249  Identities=10%  Similarity=0.069  Sum_probs=125.3

Q ss_pred             CCCcEEEEEEcCCCcEEEEec--C----CeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCC-----
Q psy17188        112 HGEVVCAVTISNPTKYVYTGG--K----GCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-----  180 (504)
Q Consensus       112 h~~~V~~v~~s~~~~~l~~~~--d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----  180 (504)
                      +.-.+..+++||++++++.+-  +    ..++++|+++++...  ..+.    ......++|++|++.|+....+     
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~--~~i~----~~~~~~~~W~~D~~~~~Y~~~~~~~~~  196 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP--DVLE----RVKFSCMAWTHDGKGMFYNAYPQQDGK  196 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE--EEEE----EECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecc--cccc----cccccceEEcCCCCEEEEEEeccccCc
Confidence            444456678899999998543  2    469999999863211  1111    1112468899999988765322     


Q ss_pred             -----------CcEEEEeCCCCCccceeeeecC--cCceEEEEECCCCCEEEEEeC---CCc--EEEEECCCCe------
Q psy17188        181 -----------SNLSIWDLASPTPRIKAELTSS--APACYALAISPDSKVCFSCCS---DGN--IAVWDLHNQT------  236 (504)
Q Consensus       181 -----------g~i~iw~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~---dg~--i~iwd~~~~~------  236 (504)
                                 ..|..+.+.+....-.......  ...+..+..++++++++....   +..  +.+.|+....      
T Consensus       197 ~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~  276 (430)
T d1qfma1         197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI  276 (430)
T ss_dssp             CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred             ccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccc
Confidence                       2588888877654433333332  234667778999998764432   233  3444543321      


Q ss_pred             --EEEeecCCCCCeEEEEEccCCCEEEEEcC---CCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc
Q psy17188        237 --LVRQFQGHTDGASCIDISADGTKLWTGGL---DNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL  311 (504)
Q Consensus       237 --~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  311 (504)
                        ....+........-+. +.++.+++....   ++.|...++.......|            ......+...+..-.+.
T Consensus       277 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w------------~~vi~~~~~~~~~~~~~  343 (430)
T d1qfma1         277 LKWVKLIDNFEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKW------------KVLVPEHEKDVLEWVAC  343 (430)
T ss_dssp             CCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCCGGGC------------EEEECCCSSCEEEEEEE
T ss_pred             cceeEeecccccceEEEe-cCCceeecccCcccccceeEEecCCCCccccc------------eEEecccCcceeeeEEE
Confidence              1122222222222222 222223333222   34555555543321100            11111223334333344


Q ss_pred             CCCCEEEEEe-CCC--cEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc--CCCeEEEEecCCCC
Q psy17188        312 PDGRTLIVGG-EAS--NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH--YKSCVKVWDISQPG  381 (504)
Q Consensus       312 ~~~~~l~~~~-~dg--~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~  381 (504)
                      ..+.+|+... .++  .|++++...+.....  .......+..+...++....++...+  .-..+..+|+.++.
T Consensus       344 ~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~--~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         344 VRSNFLVLCYLHDVKNTLQLHDLATGALLKI--FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             ETTTEEEEEEEETTEEEEEEEETTTCCEEEE--ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EECCEEEEEEEcCCEeEEEEEECCCCcEEEe--cCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            4455666554 444  488899887654322  22233445555555555543433332  23567777776653

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.36  E-value=0.02  Score=49.29  Aligned_cols=191  Identities=15%  Similarity=0.216  Sum_probs=106.1

Q ss_pred             eEEEEEcCCCCEEEEEeC------------CCcEEEEeCCCCCcccee-eeccC-----CCceeeEEE--CCCCCCceee
Q psy17188        305 IRSVKLLPDGRTLIVGGE------------ASNLSIWDLASPTPRIKA-ELTSS-----APACYALAI--SPDSKSPFFS  364 (504)
Q Consensus       305 v~~~~~~~~~~~l~~~~~------------dg~i~v~d~~~~~~~~~~-~~~~~-----~~~i~~~~~--~~~~~~~~~~  364 (504)
                      ...+...|+|..+++++.            .|.|.++|+++.+..... .....     .-....+.+  .+++...+++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            456788888877776542            488999999876433221 11111     112344443  4555543444


Q ss_pred             ec--cCCCeEEEEecCCCCCCCccccccc--ccCCCceEEEEEcCCCCEEEEeeC---------------CCcEEEeeCC
Q psy17188        365 SH--HYKSCVKVWDISQPGSKTPVSQLDC--LQRDNYIRSVKLLPDGRTLIVGGE---------------ASNLSIWDLA  425 (504)
Q Consensus       365 ~~--~~~~~i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~~~---------------dg~i~iwd~~  425 (504)
                      ..  ....+|.+|++......  +....+  .......+++++..++.++++-..               -+...+|..+
T Consensus       117 vnH~~~~~~ieif~~~~~~~~--l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~  194 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKS--LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  194 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTE--EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EeccCCCceeEEEEEeCCCCe--EEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEc
Confidence            33  34668889988654321  111111  123345789999999988887311               1223444444


Q ss_pred             CCCcceeecccCCCCceeEEEECCCCCEEEEee-CCCcEEEEEcCCcceEEEEe--ecCCceEEEEEccCCCEEEEec
Q psy17188        426 SPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQ--GHTDGASCIDISADGTKLWTGG  500 (504)
Q Consensus       426 ~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~s~d~~~l~s~s  500 (504)
                      .++.....   ......+.++++||+++|+.+. ..++|++|++.....+....  .-....-.+.+.+++..+..++
T Consensus       195 ~~~~~~~~---~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         195 PNDVRVVA---EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SSCEEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEc---CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            33322221   1223467889999998877654 57889999987543322211  2334566778876443444443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.31  E-value=0.031  Score=45.94  Aligned_cols=205  Identities=7%  Similarity=0.127  Sum_probs=126.1

Q ss_pred             EEcCCCcEEEEecCCeEEEEeCCCCCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeee
Q psy17188        120 TISNPTKYVYTGGKGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAEL  199 (504)
Q Consensus       120 ~~s~~~~~l~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  199 (504)
                      -.+|..+.||--+..++.++|+++.   ..++..   .....|.--.|-.+. .|+..+ +..|+-|+++... .....+
T Consensus        69 IMhP~~~IiALrag~~LQiFnletK---~klks~---~~~e~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s-~P~k~f  139 (327)
T d1utca2          69 IMNPASKVIALKAGKTLQIFNIEMK---SKMKAH---TMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMF  139 (327)
T ss_dssp             EECSSSSEEEEEETTEEEEEETTTT---EEEEEE---ECSSCCCEEEESSSS-EEEEEC-SSEEEEEESSSSC-CCEEEE
T ss_pred             hcCCCCcEEEEecCCeEEEEehhHh---hhhceE---EcCCCcEEEEecCCC-EEEEEc-CCceEEEcccCCC-Cchhhh
Confidence            3568888888766789999999874   333333   334567777787544 555554 4689999996533 233334


Q ss_pred             ecC----cCceEEEEECCCCCEEEEEe---C----CCcEEEEECCCCeEEEeecCCCCCeEEEEEccCC---CEEEEEc-
Q psy17188        200 TSS----APACYALAISPDSKVCFSCC---S----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISADG---TKLWTGG-  264 (504)
Q Consensus       200 ~~~----~~~v~~~~~s~~~~~l~~~~---~----dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~-  264 (504)
                      ..|    ...|..-..+++.++++..+   .    .|.+.+|..+.+ .-+.+.+|.+....+.+..+.   ..++.+. 
T Consensus       140 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r  218 (327)
T d1utca2         140 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR  218 (327)
T ss_dssp             ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred             hhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeEEEEcCCCCCCceEEEEEEC
Confidence            333    24567777788888777543   2    367899997755 346677887655555443211   1333332 


Q ss_pred             --CCCeEEEEECCCCceEEEeecCCCCCCCc--c----cceecccCCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy17188        265 --LDNTVRSWDLREGCVKVWDISQPGSKTPV--S----QLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTP  336 (504)
Q Consensus       265 --~dg~i~~wd~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~  336 (504)
                        ..+.+.+.++....         ....+.  +    .+......+...++..++.-..++.-+.-|.+++||++++..
T Consensus       219 ~~~~~kLhIiEig~~~---------~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~  289 (327)
T d1utca2         219 GQAGGKLHIIEVGTPP---------TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  289 (327)
T ss_dssp             ETTEEEEEEEECSCCC---------TTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred             CCCCcEEEEEEcCCCc---------cCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccE
Confidence              22456666654421         001111  0    111112356678899999888999999999999999999865


Q ss_pred             cceeeec
Q psy17188        337 RIKAELT  343 (504)
Q Consensus       337 ~~~~~~~  343 (504)
                      ....++.
T Consensus       290 i~~nRIs  296 (327)
T d1utca2         290 IYMNRIS  296 (327)
T ss_dssp             EEEEECC
T ss_pred             EEEeecC
Confidence            4444443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.22  E-value=0.063  Score=50.15  Aligned_cols=53  Identities=13%  Similarity=0.076  Sum_probs=38.1

Q ss_pred             cCCCCEEEEeeCCCcEEEeeCCCCCcceeecccCCCCceeEEEECCCCC-EEEEe
Q psy17188        404 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSK-VCFSC  457 (504)
Q Consensus       404 s~~g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~-~l~s~  457 (504)
                      +..+.++++|+.||.++.+|.++++.+....+...... .-+.+..+|+ |++..
T Consensus       494 stagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~-~P~ty~~~G~qYv~i~  547 (582)
T d1flga_         494 ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVS-PPITWEQDGEQYLGVT  547 (582)
T ss_dssp             EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS-CCEEEEETTEEEEEEE
T ss_pred             EEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccc-cCEEEEECCEEEEEEE
Confidence            34677888999999999999999999888776543322 1146667885 55543

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=97.09  E-value=0.056  Score=46.27  Aligned_cols=205  Identities=11%  Similarity=0.188  Sum_probs=115.6

Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEE------EcCCCCEEEEEe-CC---C
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVK------LLPDGRTLIVGG-EA---S  324 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~-~d---g  324 (504)
                      |+..+++....++-|++||+...++...                  ..+.+..+.      +......+++++ ++   .
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~G~~l~~~------------------~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~   99 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLEGKMLHSY------------------HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKN   99 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETTCCEEEEC------------------CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTC
T ss_pred             cCccEEEEEcCcCCEEEEcCCCcEEEec------------------ccCCcCccccccccccCCcceEEEEEeCCcCcce
Confidence            3456777777777799999975544321                  112233332      222233344444 22   3


Q ss_pred             cEEEEeCCCCCccceeee-------ccCCCceeeEEE--CCCCCCceeeeccCCCeEEEEecCCCCCC-CcccccccccC
Q psy17188        325 NLSIWDLASPTPRIKAEL-------TSSAPACYALAI--SPDSKSPFFSSHHYKSCVKVWDISQPGSK-TPVSQLDCLQR  394 (504)
Q Consensus       325 ~i~v~d~~~~~~~~~~~~-------~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~~  394 (504)
                      .|.+|.+...... ...+       ......+..+++  ++.....+++....++.+..|.+...... ...........
T Consensus       100 ~l~~~~id~~~~~-l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~  178 (353)
T d1h6la_         100 TIEIYAIDGKNGT-LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKM  178 (353)
T ss_dssp             EEEEEEEETTTTE-EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEEC
T ss_pred             eEEEEEecCcccc-cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCC
Confidence            5777876532211 1111       111224667776  66655556777788999999987543321 22233334445


Q ss_pred             CCceEEEEEcCCCCEEEEeeCCCcEEEeeCCCC--Ccce-eecc--cCCCCceeEEEEC--CCCC-EEEEee-CCCcEEE
Q psy17188        395 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASP--TPRI-KAEL--TSSAPACYALAIS--PDSK-VCFSCC-SDGNIAV  465 (504)
Q Consensus       395 ~~~i~~~~~s~~g~~l~~~~~dg~i~iwd~~~~--~~~~-~~~~--~~~~~~v~~l~~s--~~~~-~l~s~~-~dg~i~i  465 (504)
                      ...+..+.+......|+.+-++..|..++....  .... ....  ......+..|++-  .++. ||++.+ .+.+..|
T Consensus       179 ~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~v  258 (353)
T d1h6la_         179 NSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAI  258 (353)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred             CCccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEE
Confidence            667889999999999999988777766665422  1111 1111  1233456666643  2333 555444 5788999


Q ss_pred             EEcCCc-ceEEEEe
Q psy17188        466 WDLHNQ-TLVRQFQ  478 (504)
Q Consensus       466 wd~~~~-~~~~~~~  478 (504)
                      ||.... +.+..+.
T Consensus       259 ydr~~~~~~~g~F~  272 (353)
T d1h6la_         259 YERQGQNKYVADFQ  272 (353)
T ss_dssp             EESSTTCCEEEEEE
T ss_pred             EecCCCccccceEE
Confidence            998774 6665654

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.54  E-value=0.19  Score=42.87  Aligned_cols=194  Identities=12%  Similarity=0.196  Sum_probs=111.4

Q ss_pred             cCCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE------CCCCCEEEEEeC--C--CcEEEEECCC-CeE
Q psy17188        169 PDGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI------SPDSKVCFSCCS--D--GNIAVWDLHN-QTL  237 (504)
Q Consensus       169 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~------s~~~~~l~~~~~--d--g~i~iwd~~~-~~~  237 (504)
                      |+..+++.....+-|++||++..+   ...+.  .+.+..+..      ..+...+++++.  +  .+|.+|.+.. ...
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~G~~---l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~  112 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLEGKM---LHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT  112 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETTCCE---EEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred             cCccEEEEEcCcCCEEEEcCCCcE---EEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence            345566666666679999996432   22222  233444433      222223555542  2  2577787652 223


Q ss_pred             EEeecCC-------CCCeEEEEE--ccC-CC-EEEEEcCCCeEEEEECC---CCceEEEeecCCCCCCCcccceecccCC
Q psy17188        238 VRQFQGH-------TDGASCIDI--SAD-GT-KLWTGGLDNTVRSWDLR---EGCVKVWDISQPGSKTPVSQLDCLQRDN  303 (504)
Q Consensus       238 ~~~~~~h-------~~~v~~~~~--~~~-~~-~l~s~~~dg~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (504)
                      +..+...       ...+..+|+  ++. +. +++....+|.+..|.+.   .+.+..            ..........
T Consensus       113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~------------~lvr~f~~~~  180 (353)
T d1h6la_         113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISG------------KKVRAFKMNS  180 (353)
T ss_dssp             EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEE------------EEEEEEECSS
T ss_pred             cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceee------------EeeeccCCCC
Confidence            3333321       124667777  554 44 45667778888888663   232211            1233334456


Q ss_pred             ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCcc--cee-eec--cCCCceeeEEEC--CCCCCceeeeccCCCeEEEEe
Q psy17188        304 YIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR--IKA-ELT--SSAPACYALAIS--PDSKSPFFSSHHYKSCVKVWD  376 (504)
Q Consensus       304 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~-~~~--~~~~~i~~~~~~--~~~~~~~~~~~~~~~~i~i~d  376 (504)
                      .+..+.+.+....|+++-++.-+..++.......  ... ...  .....+..+++-  .++...++++.-.+++..+||
T Consensus       181 q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd  260 (353)
T d1h6la_         181 QTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE  260 (353)
T ss_dssp             CEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred             ccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence            7889999999999999988877766665432211  111 111  234567777764  345555777777889999999


Q ss_pred             cCC
Q psy17188        377 ISQ  379 (504)
Q Consensus       377 ~~~  379 (504)
                      ...
T Consensus       261 r~~  263 (353)
T d1h6la_         261 RQG  263 (353)
T ss_dssp             SST
T ss_pred             cCC
Confidence            865

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.32  E-value=0.33  Score=43.29  Aligned_cols=56  Identities=14%  Similarity=0.046  Sum_probs=39.3

Q ss_pred             CcEEEEEEcCCCcEEEEec-CCeEEEEeCCCCCCCCceeeee----ecCCCCceEEEEEccC
Q psy17188        114 EVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGSKTPVSQLD----CLQRDNYIRSVKLLPD  170 (504)
Q Consensus       114 ~~V~~v~~s~~~~~l~~~~-d~~i~vw~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~  170 (504)
                      +.-.+|+|.|+++++++-. .|.|++++.+++.. ..+..+.    ....++....|+|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~-~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcE-eecccCCccccccCCCCceeeEEeCCC
Confidence            4557999999999999986 79999998776532 2222211    1123567889999984

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.074  Score=44.36  Aligned_cols=93  Identities=10%  Similarity=0.037  Sum_probs=45.9

Q ss_pred             cEEEEeCCCCCccceeeeecCcCceEEEEECCCCCEEEEEeC---------CCcEEEEECCCCeEEEeecCC--CCCeEE
Q psy17188        182 NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---------DGNIAVWDLHNQTLVRQFQGH--TDGASC  250 (504)
Q Consensus       182 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h--~~~v~~  250 (504)
                      .+.+||+.+.+......++.....-..+..  ++++++.|+.         -..+.+||..+.+....-...  ...-.+
T Consensus        20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~   97 (288)
T d1zgka1          20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV   97 (288)
T ss_dssp             CEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred             eEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceec
Confidence            588999988765444333322222222222  5556666552         235788898876554322111  111112


Q ss_pred             EEEccCCCEEEEEcCCC-----eEEEEECCCCc
Q psy17188        251 IDISADGTKLWTGGLDN-----TVRSWDLREGC  278 (504)
Q Consensus       251 ~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~  278 (504)
                      ..  -+++.++.++.++     ....+|..+..
T Consensus        98 ~~--~~~~i~~~gg~~~~~~~~~~~~~~~~~~~  128 (288)
T d1zgka1          98 GV--IDGHIYAVGGSHGCIHHNSVERYEPERDE  128 (288)
T ss_dssp             EE--ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred             cc--cceeeEEecceecccccceeeeeccccCc
Confidence            22  2455555555443     34456666654

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.16  Score=42.14  Aligned_cols=65  Identities=15%  Similarity=0.247  Sum_probs=35.2

Q ss_pred             CCCEEEEeeCCC-----cEEEeeCCCCCcceeecccCCCCceeEEEECCCCCEEEEeeCCC-----cEEEEEcCCcc
Q psy17188        406 DGRTLIVGGEAS-----NLSIWDLASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQT  472 (504)
Q Consensus       406 ~g~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg-----~i~iwd~~~~~  472 (504)
                      +++.++.|+.++     ....+|..+.+............... ++. -++++++.|+.++     .+.+||+.+.+
T Consensus       195 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~-~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         195 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG-ITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             eeeEEEecCccccccccceeeeeecceeeecccCccCcccceE-EEE-ECCEEEEEecCCCCeecceEEEEECCCCE
Confidence            455666665443     46777877654333222222211112 222 2678888877654     37889988754

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.80  E-value=0.59  Score=41.59  Aligned_cols=107  Identities=14%  Similarity=0.174  Sum_probs=61.9

Q ss_pred             CCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCccceeeee------cCcCceEEEEECCC---CCEEEEEeC------
Q psy17188        159 DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELT------SSAPACYALAISPD---SKVCFSCCS------  223 (504)
Q Consensus       159 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~~~~~v~~~~~s~~---~~~l~~~~~------  223 (504)
                      -...++|+|.||+++|++--..|.|++++..+++......+.      .-......|+|+|+   ..++.....      
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~  105 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCC
Confidence            356779999999998888755799999988776543333221      12345788999985   334443211      


Q ss_pred             -C----Cc--EEEEECCCC--e------EEEeec-CCCCCeEEEEEccCCCEEEEEcC
Q psy17188        224 -D----GN--IAVWDLHNQ--T------LVRQFQ-GHTDGASCIDISADGTKLWTGGL  265 (504)
Q Consensus       224 -d----g~--i~iwd~~~~--~------~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~  265 (504)
                       +    ..  +..+.....  .      .+..+. ........|.|.||+.+.++.+.
T Consensus       106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence             1    11  222322221  1      111111 11223578999999987777664

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.46  E-value=0.54  Score=40.45  Aligned_cols=193  Identities=12%  Similarity=0.021  Sum_probs=102.4

Q ss_pred             CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCc
Q psy17188        246 DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASN  325 (504)
Q Consensus       246 ~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  325 (504)
                      ....-+++++...+++.|+.++ +.+..+..-.-  .........    .......-..|..++|+.+  .|++. .++.
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~--~~~~~~~~~----~~~~~~~ip~v~~vafs~d--~l~v~-~~~~  106 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRD--HITSDSTPL----TFKWEKEIPDVIFVCFHGD--QVLVS-TRNA  106 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHH--HHHSSSCCC----CCSEEEECTTEEEEEEETT--EEEEE-ESSE
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHH--HhhccCCCC----cceeccCCCCeEEEEeeCC--EEEEE-eCCC
Confidence            3456778888777888888774 55655321100  000000000    0111111235788999754  45555 4456


Q ss_pred             EEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcC
Q psy17188        326 LSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLP  405 (504)
Q Consensus       326 i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  405 (504)
                      +..++.....  ..........++..+.+.|.    .++....++.+.++++................-...+.+++|++
T Consensus       107 l~~~~~~~l~--~~~~~~~~~~~~~~~~~~p~----~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~  180 (381)
T d1xipa_         107 LYSLDLEELS--EFRTVTSFEKPVFQLKNVNN----TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKD  180 (381)
T ss_dssp             EEEEESSSTT--CEEEEEECSSCEEEEEECSS----EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETT
T ss_pred             EEEEEeeccc--cccccccccccccceecCCc----eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeC
Confidence            7788776542  22222333446778888776    35555668888899887754332222222222345577888888


Q ss_pred             CCCEEEEeeCCCcEEEe-eCCCCCcceeecccCCCCceeEEEECCCCCEEEEe
Q psy17188        406 DGRTLIVGGEASNLSIW-DLASPTPRIKAELTSSAPACYALAISPDSKVCFSC  457 (504)
Q Consensus       406 ~g~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~  457 (504)
                      .|+.++++..++ ..+- ++...  ............+.++.|-.+..++++-
T Consensus       181 kgkq~v~~~g~~-~q~k~~i~~~--~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         181 RSFQSFAWRNGE-MEKQFEFSLP--SELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             SCEEEEEEETTE-EEEEEEECCC--HHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             CcEEEEEeCCCc-eeeccCCCCc--cccCCCcCCCcceeEEEEecCceEEEEE
Confidence            888887764332 2211 22211  1111112234467888998777777654

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=95.39  E-value=0.4  Score=36.81  Aligned_cols=225  Identities=13%  Similarity=0.122  Sum_probs=114.7

Q ss_pred             CCCEEEEecCCCcEEEEeCCCCCccceeeeecCcCceEEEEE-CCCCCEEEEE------eCCCcEEEEECCCCeEEEeec
Q psy17188        170 DGRTLIVGGEASNLSIWDLASPTPRIKAELTSSAPACYALAI-SPDSKVCFSC------CSDGNIAVWDLHNQTLVRQFQ  242 (504)
Q Consensus       170 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~------~~dg~i~iwd~~~~~~~~~~~  242 (504)
                      +.+.|+++...|.+.++-+..++..   .+.  ..+|....- .+.-.++...      -+-..|.+-++...-....+.
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~v---kLt--kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~   99 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETV---KLN--REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLE   99 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCE---ECC--SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECT
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEE---EEe--cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEec
Confidence            4457777878899999988766532   121  112211111 1111122221      122345666665333333444


Q ss_pred             CCC-CCeEEEEEccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEc-CCCCEEEEE
Q psy17188        243 GHT-DGASCIDISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLL-PDGRTLIVG  320 (504)
Q Consensus       243 ~h~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~  320 (504)
                      ... -.|.+++.. +.+..++|+......+|-++.|+++...--.+     + .+...-..+.|..+.+- ++.+-++++
T Consensus       100 spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPp-----F-sFVtDI~~d~I~G~g~~~g~~~sfF~a  172 (313)
T d2hu7a1         100 AVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPG-----F-GFVSDIRGDLIAGLGFFGGGRVSLFTS  172 (313)
T ss_dssp             TSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESS-----C-EEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCC-----c-ceEEeccCCeEEEEeeecCCcceEEEE
Confidence            222 456666654 44577888888889999999998764321110     0 11111123334444433 333345555


Q ss_pred             eC-CCcEEEEeCCCCCccceeeeccCCCceeeEEECCCCCCceeeecc----CCCeEEEEecCCCCCCC-ccccccc-cc
Q psy17188        321 GE-ASNLSIWDLASPTPRIKAELTSSAPACYALAISPDSKSPFFSSHH----YKSCVKVWDISQPGSKT-PVSQLDC-LQ  393 (504)
Q Consensus       321 ~~-dg~i~v~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~i~i~d~~~~~~~~-~~~~~~~-~~  393 (504)
                      .- .|.+++++...+             .+......+..+   +++..    ...-| -+|++.+.-.. .+..... .-
T Consensus       173 dl~SG~lri~tpkeG-------------S~~~ay~~~gnK---V~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy  235 (313)
T d2hu7a1         173 NLSSGGLRVFDSGEG-------------SFSSASISPGMK---VTAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSY  235 (313)
T ss_dssp             ETTTEEEEEECCSSE-------------EEEEEEECTTSC---EEEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHH
T ss_pred             ecccCCEEEecCCCC-------------cccceeEccCce---eeeccCCCCceEEE-EEecccCceeeeecCcccceee
Confidence            55 778888876655             444444455444   22221    11122 34555332110 0000000 01


Q ss_pred             CCCceEEEEEcCCCCEEEEeeCCCcEEEee
Q psy17188        394 RDNYIRSVKLLPDGRTLIVGGEASNLSIWD  423 (504)
Q Consensus       394 ~~~~i~~~~~s~~g~~l~~~~~dg~i~iwd  423 (504)
                      ....|+-+-+.|++++++.+-.||.-.+|.
T Consensus       236 ~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~  265 (313)
T d2hu7a1         236 RPTAITWLGYLPDGRLAVVARREGRSAVFI  265 (313)
T ss_dssp             CCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred             cceEEEeeeeCCCCcEEEEEecCCchheee
Confidence            234567778999999988888999988886

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=95.07  E-value=0.51  Score=36.20  Aligned_cols=228  Identities=17%  Similarity=0.173  Sum_probs=127.3

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEeecCCCCCeEEEEEccCCCEEEEEcCCCeEEEEECCCCce----EEEeecCCCC
Q psy17188        214 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISADGTKLWTGGLDNTVRSWDLREGCV----KVWDISQPGS  289 (504)
Q Consensus       214 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~----~~~~~~~~~~  289 (504)
                      +.++++++...|.+.++-+..++.+..-+   .+|.... .|...      .|..+.+-|+..|+-    ...+...++.
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~-~Pk~~------ldfi~f~RDV~kGkE~Hai~~~Nlk~~GE   94 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVL-DPHYG------VGRVILVRDVSKGAEQHALFKVNTSRPGE   94 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEEC-EECTT------BSEEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcC-CCccC------cceEEEEeehhcCcceeeEEEEccCCCCe
Confidence            44588888889999999888877665433   3333221 12211      122334445544431    1112221121


Q ss_pred             CCCcccceeccc-CCceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCccceeeecc-------CCCceeeEEECCCCCCc
Q psy17188        290 KTPVSQLDCLQR-DNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTS-------SAPACYALAISPDSKSP  361 (504)
Q Consensus       290 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~  361 (504)
                           ....... .-.|.++++. +.+..++|+......+|-++.++......++.       ....|..+.+...+...
T Consensus        95 -----E~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~s  168 (313)
T d2hu7a1          95 -----EQRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVS  168 (313)
T ss_dssp             -----EEECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEE
T ss_pred             -----eeEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcce
Confidence                 1111111 1345566554 44667778777788888888776554444433       22345555555444444


Q ss_pred             eeeeccCCCeEEEEecCCCCCCCcccccccccCCCceEEEEEcCCCCEEEEeeCC-C--cEEEeeCCCCCcceeecccC-
Q psy17188        362 FFSSHHYKSCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEA-S--NLSIWDLASPTPRIKAELTS-  437 (504)
Q Consensus       362 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~-  437 (504)
                      +|++.-..|.+++++-.                ++.++.....++.+. +++-+. |  ...-+|+++++-.. .+++. 
T Consensus       169 fF~adl~SG~lri~tpk----------------eGS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yer-ve~P~k  230 (313)
T d2hu7a1         169 LFTSNLSSGGLRVFDSG----------------EGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVED-LELPSK  230 (313)
T ss_dssp             EEEEETTTEEEEEECCS----------------SEEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEE-CCCSSC
T ss_pred             EEEEecccCCEEEecCC----------------CCcccceeEccCcee-eeccCCCCceEEEEEecccCceee-eecCcc
Confidence            55555558888888743                455667777777665 443221 1  12245777654322 22222 


Q ss_pred             -----CCCceeEEEECCCCCEEEEeeCCCcEEEEEcCCcceEEEE
Q psy17188        438 -----SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF  477 (504)
Q Consensus       438 -----~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  477 (504)
                           ....|+-+-+.||+++++.+-.||.-++|.  +|+.+...
T Consensus       231 d~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~in~p  273 (313)
T d2hu7a1         231 DFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERVEAP  273 (313)
T ss_dssp             HHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEECCC
T ss_pred             cceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEecCC
Confidence                 233466667999999999999999999986  55555443

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.80  E-value=1  Score=38.25  Aligned_cols=189  Identities=13%  Similarity=0.116  Sum_probs=101.5

Q ss_pred             EEEEcCCCcEEEEec-------------CCeEEEEeCCCCCCCCceeeeeecC---CCCceEEEEE--ccCCC-EEEEe-
Q psy17188        118 AVTISNPTKYVYTGG-------------KGCVKVWDISQPGSKTPVSQLDCLQ---RDNYIRSVKL--LPDGR-TLIVG-  177 (504)
Q Consensus       118 ~v~~s~~~~~l~~~~-------------d~~i~vw~~~~~~~~~~~~~~~~~~---~~~~v~~~~~--s~~~~-~l~~~-  177 (504)
                      .++..|+|..+++++             .|.|.++|+++.........+....   ..-....+.+  .++++ +|++. 
T Consensus        39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvn  118 (340)
T d1v04a_          39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN  118 (340)
T ss_dssp             EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred             eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEe
Confidence            356667777766653             3889999987653322222111100   0112234443  34565 34443 


Q ss_pred             --cCCCcEEEEeCCCCCcccee--eee-cCcCceEEEEECCCCCEEEEEeC---------------CCcEEEEECCCCeE
Q psy17188        178 --GEASNLSIWDLASPTPRIKA--ELT-SSAPACYALAISPDSKVCFSCCS---------------DGNIAVWDLHNQTL  237 (504)
Q Consensus       178 --~~dg~i~iw~~~~~~~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~~~  237 (504)
                        ....+|.+|++.........  ... ........+++..++.+++|-..               -....+|..+.++.
T Consensus       119 H~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~  198 (340)
T d1v04a_         119 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDV  198 (340)
T ss_dssp             CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCE
T ss_pred             ccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCce
Confidence              24567888888654432211  111 12234678888888888777321               12334444444433


Q ss_pred             EEeecCCCCCeEEEEEccCCCEEE-EEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCC-CC
Q psy17188        238 VRQFQGHTDGASCIDISADGTKLW-TGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPD-GR  315 (504)
Q Consensus       238 ~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~  315 (504)
                      ..... .-...+.++++||+++|+ +-+..+.|++|++.......             ......-...+-.+.+.++ |.
T Consensus       199 ~~~~~-~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~-------------~~~~~~l~~~pDNi~~d~~~g~  264 (340)
T d1v04a_         199 RVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLT-------------PLRVLSFDTLVDNISVDPVTGD  264 (340)
T ss_dssp             EEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEE-------------EEEEEECSSEEEEEEECTTTCC
T ss_pred             EEEcC-CCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccc-------------eEEEecCCCCCCccEEecCCCE
Confidence            22222 345678999999988665 44567789999887543110             1112223455677888764 44


Q ss_pred             EEEEE
Q psy17188        316 TLIVG  320 (504)
Q Consensus       316 ~l~~~  320 (504)
                      +.+.+
T Consensus       265 lwva~  269 (340)
T d1v04a_         265 LWVGC  269 (340)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            44433

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.36  E-value=1.9  Score=36.11  Aligned_cols=202  Identities=13%  Similarity=0.107  Sum_probs=113.7

Q ss_pred             cCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceecccCCceEEEEEcCCCCEEEEEeCCCcEEE---EeC
Q psy17188        255 ADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSI---WDL  331 (504)
Q Consensus       255 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v---~d~  331 (504)
                      |+...+++-+.+|.|+--++++-+.     ....      ... ....+.+..+........|+.-+..|.++.   |++
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~-----~~~~------~~~-~k~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~ei   70 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAA-----SNGQ------DFA-MKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHEL   70 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHH-----TTTC------CCC-CCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGS
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhh-----cCCC------CCc-ccCCceEEEEEEEcCCCEEEEEecCCEEEEEeeccC
Confidence            5667888999999998766543110     0000      111 123445555555555556666667787554   444


Q ss_pred             CCCCcc----ce---eeeccCCCceeeEEECCCCCCceeeeccCCCeEEEEecCCCCCC---CcccccccccCCCceEEE
Q psy17188        332 ASPTPR----IK---AELTSSAPACYALAISPDSKSPFFSSHHYKSCVKVWDISQPGSK---TPVSQLDCLQRDNYIRSV  401 (504)
Q Consensus       332 ~~~~~~----~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~---~~~~~~~~~~~~~~i~~~  401 (504)
                      ......    ..   ..+......+..+...+......++..+..|.++..++......   ....... ......+..+
T Consensus        71 P~~~~~s~G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~-L~~~D~l~~v  149 (323)
T d1wp5a_          71 PDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGIN-LKNDDQVVDV  149 (323)
T ss_dssp             CBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSC-CCTTCCEEEE
T ss_pred             cccccccccccceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhcc-ccccccccce
Confidence            432211    11   11222222333444443333336777788999999987653221   1122222 2345667777


Q ss_pred             EEcCCCCEEEEeeCCCcEEEeeCCCC-------CcceeecccCCCCceeEEEECCCCCEEEEeeCCCcEEEEEcC
Q psy17188        402 KLLPDGRTLIVGGEASNLSIWDLASP-------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  469 (504)
Q Consensus       402 ~~s~~g~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~  469 (504)
                      ....+...++..+..|.+..|+...-       .......+.....-+......+++..|+..+..|..+.-.+.
T Consensus       150 ~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~  224 (323)
T d1wp5a_         150 HLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT  224 (323)
T ss_dssp             EEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             eccCCCeEEEEEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccch
Confidence            77777788999999999988886532       112223333333334444566677888999999988876653

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.14  E-value=4.9  Score=34.22  Aligned_cols=139  Identities=13%  Similarity=0.072  Sum_probs=82.9

Q ss_pred             EEEEEEcCCCcEEEEecCCeEEEEeCCC-------CCCCCceeeeeecCCCCceEEEEEccCCCEEEEecCCCcEEEEeC
Q psy17188        116 VCAVTISNPTKYVYTGGKGCVKVWDISQ-------PGSKTPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  188 (504)
Q Consensus       116 V~~v~~s~~~~~l~~~~d~~i~vw~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  188 (504)
                      ..-+++++...++++++...++|-.++.       ......+....   .-..|..++|+.|  .|+.. .++.+..++.
T Consensus        39 ~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~---~ip~v~~vafs~d--~l~v~-~~~~l~~~~~  112 (381)
T d1xipa_          39 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK---EIPDVIFVCFHGD--QVLVS-TRNALYSLDL  112 (381)
T ss_dssp             CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE---ECTTEEEEEEETT--EEEEE-ESSEEEEEES
T ss_pred             cceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceecc---CCCCeEEEEeeCC--EEEEE-eCCCEEEEEe
Confidence            4567888877778777755677776421       01011111111   1235889999754  45554 3566888887


Q ss_pred             CCCCccceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEeecC-----CCCCeEEEEEccCCCEEEEE
Q psy17188        189 ASPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-----HTDGASCIDISADGTKLWTG  263 (504)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~  263 (504)
                      ..-..  ......-...+..+.++|.  .++....++.+.++++.+++......+     -.+.+.+++|++.|..++++
T Consensus       113 ~~l~~--~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         113 EELSE--FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             SSTTC--EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             ecccc--ccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEe
Confidence            65322  2233334456788888876  466666789999999988754332211     22456777777777666665


Q ss_pred             c
Q psy17188        264 G  264 (504)
Q Consensus       264 ~  264 (504)
                      .
T Consensus       189 ~  189 (381)
T d1xipa_         189 R  189 (381)
T ss_dssp             E
T ss_pred             C
Confidence            3

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.64  E-value=6.7  Score=32.55  Aligned_cols=209  Identities=12%  Similarity=0.084  Sum_probs=111.9

Q ss_pred             EEEEEcCCCcEEEEecCCeE---EEEeCCCCCC---CCceeeeeecCCCCceEEE-EEcc--CCCEEEEecCCCcEEEEe
Q psy17188        117 CAVTISNPTKYVYTGGKGCV---KVWDISQPGS---KTPVSQLDCLQRDNYIRSV-KLLP--DGRTLIVGGEASNLSIWD  187 (504)
Q Consensus       117 ~~v~~s~~~~~l~~~~d~~i---~vw~~~~~~~---~~~~~~~~~~~~~~~v~~~-~~s~--~~~~l~~~~~dg~i~iw~  187 (504)
                      ..+..+....+|+..+.|.+   ++|++.....   ..++..+-.......+..+ ...+  ...+|+..+..|.++..+
T Consensus        43 ~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~  122 (323)
T d1wp5a_          43 AMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTE  122 (323)
T ss_dssp             EEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCEEEEEecCCEEEEEeeccCcccccccccccceeeecccCCcceEEEeeccccccceeEEEEeehhheeecc
Confidence            33444455667777777765   4455553321   1222222222333344443 3332  467888888999999998


Q ss_pred             CCCCCc------cceeeeecCcCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-------EEeecC-CCCCeEEE-E
Q psy17188        188 LASPTP------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-------VRQFQG-HTDGASCI-D  252 (504)
Q Consensus       188 ~~~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~-h~~~v~~~-~  252 (504)
                      +.....      .....+. ....+..+....+...++.++..|.+..++...-..       +.-++- ....+.+. .
T Consensus       123 l~~f~~~~~~~g~~~i~L~-~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~  201 (323)
T d1wp5a_         123 LKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQL  201 (323)
T ss_dssp             GGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEE
T ss_pred             HHHhhhhhccchhhhcccc-ccccccceeccCCCeEEEEEEecceeeEeecccccccCcccccccccccccccccchhhh
Confidence            753211      1112232 344566677776677888889999999998754211       121221 22344443 4


Q ss_pred             EccCCCEEEEEcCCCeEEEEECCCCceEEEeecCCCCCCCcccceec-ccCCceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17188        253 ISADGTKLWTGGLDNTVRSWDLREGCVKVWDISQPGSKTPVSQLDCL-QRDNYIRSVKLLPDGRTLIVGGEASNLSIWDL  331 (504)
Q Consensus       253 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~  331 (504)
                      ..+++..|+..+..|..+.-.+..-..     ...+. ......... .....+..+....+...|+..+..|.+.-.++
T Consensus       202 ~~~~~~~ll~~T~~G~gKr~~~~e~~~-----~~Rgg-kGv~~~k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~  275 (323)
T d1wp5a_         202 ITSKDESIVVATQRGAVKKMKLTEFEK-----ATRAK-RGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKV  275 (323)
T ss_dssp             ECCTTCEEEEEETTSEEEEEEGGGSCC-----CCTTS-CCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEG
T ss_pred             ccccccceeeeeeeheeecccchhhcc-----ccccc-cccccccccccccceeeeeEecCCCCEEEEEeCCCEEEEEEh
Confidence            445667788888888887766543211     00000 001111111 12334556666666666777777787765554


Q ss_pred             C
Q psy17188        332 A  332 (504)
Q Consensus       332 ~  332 (504)
                      .
T Consensus       276 ~  276 (323)
T d1wp5a_         276 G  276 (323)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}

class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Tachylectin-2
family: Tachylectin-2
domain: Tachylectin-2
species: Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]

Probab=84.05  E-value=6.7  Score=29.29  Aligned_cols=147  Identities=11%  Similarity=0.043  Sum_probs=84.2

Q ss_pred             CCCCCCcceEEEECCCCCcccCCCCCCcccCCCCCccc-----cceeeecCC--CcEEEEEEcCCCcEEEEecCCeEEEE
Q psy17188         67 GIPGGKPAYSYHVTTDGQMQPVPFPPDALIGPGIPRHA-----RQINTLSHG--EVVCAVTISNPTKYVYTGGKGCVKVW  139 (504)
Q Consensus        67 ~~~~~~~v~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~--~~V~~v~~s~~~~~l~~~~d~~i~vw  139 (504)
                      |-.+-..+..+++||+|.+.++.-.  .++.-..+...     ++-++++..  +....+-|.|.|-+.++.. +  .||
T Consensus        35 Gk~g~~n~~~i~fsP~G~LyaVr~~--~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G~LyaVt~-~--~LY  109 (235)
T d1tl2a_          35 GKGGWSNFKFLFLSPGGELYGVLND--KIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSK-D--KLY  109 (235)
T ss_dssp             ESSSCTTCSEEEECTTSCEEEEETT--EEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEET-T--EEE
T ss_pred             CcccccceeEEEECCCCcEEEEECC--eEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCceEEEecC-c--cee
Confidence            3345567888899999987776554  33322222222     233444432  3456788999998888874 5  555


Q ss_pred             eCC--CCCCCCceeeeeecC--CCCceEEEEEccCCCEEEEecCCCcEEEEeCCCCCcc----ceeee-ecCcCceEEEE
Q psy17188        140 DIS--QPGSKTPVSQLDCLQ--RDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPR----IKAEL-TSSAPACYALA  210 (504)
Q Consensus       140 ~~~--~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~-~~~~~~v~~~~  210 (504)
                      .-.  +.++..-+......+  .-+.+..+-|.|+|.+-++-+ | .++-+....+...    ....+ .++-....-+.
T Consensus       110 r~~pPtn~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV~~-~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~~fi~  187 (235)
T d1tl2a_         110 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHG-Q-QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF  187 (235)
T ss_dssp             EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEET-T-EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred             cCCcCcccchhhhhhhhhhccCCcCceeEEEECCCceEEEEEC-C-cEEEcCCCCCCCchhhhhhhhhccCcccCceEEE
Confidence            533  222222111111112  234578999999998777743 3 4666664433211    11122 25555677899


Q ss_pred             ECCCCCEEEE
Q psy17188        211 ISPDSKVCFS  220 (504)
Q Consensus       211 ~s~~~~~l~~  220 (504)
                      |+|++++..+
T Consensus       188 Fs~dG~L~~v  197 (235)
T d1tl2a_         188 FSSVGTLFGV  197 (235)
T ss_dssp             ECTTSCEEEE
T ss_pred             ECCCCcEEEE
Confidence            9999987665