Psyllid ID: psy17192

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLAQ
Secondary Structure (PSIPRED)
cccccccEEEEEEEcccccccccEEEEEEEHHHHHHccEEEEEEcccccHHHHHHHccccEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEccEcccccEccEEEEEHHHHHHHEEEEEEEHHHccHHHHHHHHcccEEEccccccccEcc
Coil and Loop (DISEMBL)
mdqeteeptkwrvenswgeeqnhkgyilmtspwfKEYVFEVVvdkkyvpasvldvfnqeptilpawdpmgtlaq
Flexible Loop (DISEMBL)
mdqeteeptkwrvenswgeeqnhkGYILMTSPWFKEYVFEVVVDKKYVPASVLDVfnqeptilpawDPMGTLAQ
Low Complexity Region (SEG)
MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLAQ
Disordered region (IsUnstruct)
****************W***QNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWD*******
Disordered Region (DISOPRED)
MD*ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLA*
Disordered Region (DISEMBL)
************VENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLAQ
Disordered Region (DISPRO)
****TEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLA*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLAQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
Q13867	455	Bleomycin hydrolase OS=Ho	yes	N/A	0.891	0.145	0.712	2e-23
Q8R016	455	Bleomycin hydrolase OS=Mu	yes	N/A	0.986	0.160	0.64	6e-23
P70645	454	Bleomycin hydrolase OS=Ra	yes	N/A	0.878	0.143	0.707	9e-23
P87362	455	Bleomycin hydrolase OS=Ga	yes	N/A	0.878	0.142	0.707	9e-23
O69192	441	Aminopeptidase C OS=Liste	yes	N/A	0.905	0.151	0.492	3e-15
Q928V0	441	Aminopeptidase C OS=Liste	yes	N/A	0.905	0.151	0.462	5e-14
P94868	437	Aminopeptidase W OS=Lacto	N/A	N/A	0.932	0.157	0.434	2e-13
Q01532	483	Cysteine proteinase 1, mi	yes	N/A	1.0	0.153	0.415	2e-13
C8ZFZ7	483	Cysteine proteinase 1, mi	N/A	N/A	1.0	0.153	0.415	2e-13
B5VQH0	483	Cysteine proteinase 1, mi	N/A	N/A	1.0	0.153	0.415	2e-13

>sp|Q13867|BLMH_HUMAN Bleomycin hydrolase OS=Homo sapiens GN=BLMH PE=1 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 390 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 449

Query: 69  MGTLAQ 74
           MG LA+
Sbjct: 450 MGALAE 455

The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 4EC: 0

>sp|Q8R016|BLMH_MOUSE Bleomycin hydrolase OS=Mus musculus GN=Blmh PE=2 SV=1

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 2/75 (2%)

Query: 2   DQETEEPT--KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQE 59
           +++ +E T  KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QE
Sbjct: 381 EKDNQEGTFVKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQE 440

Query: 60  PTILPAWDPMGTLAQ 74
           P +LPAWDPMG LA+
Sbjct: 441 PIVLPAWDPMGALAE 455

The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|P70645|BLMH_RAT Bleomycin hydrolase OS=Rattus norvegicus GN=Blmh PE=1 SV=1

 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 51/65 (78%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
            KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QEP +LPAWDP
Sbjct: 390 VKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQEPIVLPAWDP 449

Query: 69  MGTLA 73
           MG LA
Sbjct: 450 MGALA 454

The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity (By similarity). Binds single-stranded DNA with higher affinity than double-stranded DNA. May play an important role in the metabolism of antibiotics.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|P87362|BLMH_CHICK Bleomycin hydrolase OS=Gallus gallus GN=BLMH PE=1 SV=1

 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 54/65 (83%)

Query: 10  KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPM 69
           KWRVENSWGE++ +KGY++MT  WF EYV+EVVVDKKYVP  VL V  QEP +LPAWDPM
Sbjct: 391 KWRVENSWGEDRGNKGYLIMTDDWFSEYVYEVVVDKKYVPEDVLAVMEQEPIVLPAWDPM 450

Query: 70  GTLAQ 74
           G LA+
Sbjct: 451 GALAK 455

The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|O69192|PEPC_LISMO Aminopeptidase C OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=pepC PE=3 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 46/67 (68%)

Query: 7   EPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAW 66
           E  +W+VENSWGE+  + GY + +  W  E+ F+VVV KKY+   +++ FNQEP  L  W
Sbjct: 374 EVNRWKVENSWGEKIGNNGYFVASDAWMDEFTFQVVVHKKYLSKELIEAFNQEPIALKPW 433

Query: 67  DPMGTLA 73
           DPMG+LA
Sbjct: 434 DPMGSLA 440

Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|Q928V0|PEPC_LISIN Aminopeptidase C OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=pepC PE=3 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 45/67 (67%)

Query: 7   EPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAW 66
           E  +W+VENSWGE+  + GY + +  W  E+ F+VVV KKY+   +++ F+ EP  L  W
Sbjct: 374 EVNRWKVENSWGEKIGNNGYFVASDAWMDEFTFQVVVHKKYLSKELIEAFSNEPIALKPW 433

Query: 67  DPMGTLA 73
           DPMG+LA
Sbjct: 434 DPMGSLA 440

Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|P94868|PEPW_LACDL Aminopeptidase W OS=Lactobacillus delbrueckii subsp. lactis GN=pepW PE=3 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 46/69 (66%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEP 60
           +D +  +  +W+VENSWG++   KGY  M++ WF+EY +EV V KK+VPA +LD+   +P
Sbjct: 368 VDVDGGQVRQWKVENSWGDKSGEKGYFTMSADWFREYTYEVAVQKKHVPAEILDLLKNQP 427

Query: 61  TILPAWDPM 69
             L  WD +
Sbjct: 428 IELDPWDSL 436

Lactobacillus delbrueckii subsp. lactis (taxid: 29397)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

>sp|Q01532|BLH1_YEAST Cysteine proteinase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAP3 PE=1 SV=3

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 407 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 466

Query: 58  QEPTILPAWDPMGTLAQ 74
           +EP +LP WDPMG LA+
Sbjct: 467 EEPIVLPIWDPMGALAK 483

The normal physiological role of the enzyme is unknown, but it is not essential for the viability of yeast cells. Has aminopeptidase activity, shortening substrate peptides sequentially by 1 amino acid. Has bleomycin hydrolase activity, which can protect the cell from the toxic effects of bleomycin. Has homocysteine-thiolactonase activity, protecting the cell against homocysteine toxicity. Acts as a repressor in the GAL4 regulatory system, but this does not require either the peptidase or nucleic acid-binding activities.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|C8ZFZ7|BLH1_YEAS8 Cysteine proteinase 1, mitochondrial OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=LAP3 PE=3 SV=2

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 407 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 466

Query: 58  QEPTILPAWDPMGTLAQ 74
           +EP +LP WDPMG LA+
Sbjct: 467 EEPIVLPIWDPMGALAK 483

The normal physiological role of the enzyme is unknown, but it is not essential for the viability of yeast cells. Has aminopeptidase activity, shortening substrate peptides sequentially by 1 amino acid. Has bleomycin hydrolase activity, which can protect the cell from the toxic effects of bleomycin. Has homocysteine-thiolactonase activity, protecting the cell against homocysteine toxicity. Acts as a repressor in the GAL4 regulatory system, but this does not require either the peptidase or nucleic acid-binding activities.

Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) (taxid: 643680)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

>sp|B5VQH0|BLH1_YEAS6 Cysteine proteinase 1, mitochondrial OS=Saccharomyces cerevisiae (strain AWRI1631) GN=LAP3 PE=3 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 407 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 466

Query: 58  QEPTILPAWDPMGTLAQ 74
           +EP +LP WDPMG LA+
Sbjct: 467 EEPIVLPIWDPMGALAK 483

The normal physiological role of the enzyme is unknown, but it is not essential for the viability of yeast cells. Has aminopeptidase activity, shortening substrate peptides sequentially by 1 amino acid. Has bleomycin hydrolase activity, which can protect the cell from the toxic effects of bleomycin. Has homocysteine-thiolactonase activity, protecting the cell against homocysteine toxicity. Acts as a repressor in the GAL4 regulatory system, but this does not require either the peptidase or nucleic acid-binding activities.

Saccharomyces cerevisiae (strain AWRI1631) (taxid: 545124)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 4

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
170043212	469	bleomycin hydrolase [Culex quinquefascia	1.0	0.157	0.675	3e-24
189238112	456	PREDICTED: similar to CG1440 CG1440-PC [	0.972	0.157	0.694	1e-23
157117597	455	bleomycin hydrolase [Aedes aegypti] gi|9	1.0	0.162	0.662	2e-23
321474511	460	hypothetical protein DAPPUDRAFT_300309 [	0.986	0.158	0.602	2e-22
345490081	472	PREDICTED: bleomycin hydrolase-like isof	0.891	0.139	0.696	5e-22
389609585	248	bleomycin hydrolase [Papilio xuthus]	0.945	0.282	0.685	5e-22
345490079	456	PREDICTED: bleomycin hydrolase-like isof	0.891	0.144	0.696	6e-22
30584035	456	Homo sapiens bleomycin hydrolase [synthe	0.891	0.144	0.712	7e-22
62898367	455	bleomycin hydrolase variant [Homo sapien	0.891	0.145	0.712	7e-22
4557367	455	bleomycin hydrolase [Homo sapiens] gi|42	0.891	0.145	0.712	7e-22

>gi|170043212|ref|XP_001849291.1| bleomycin hydrolase [Culex quinquefasciatus] gi|167866605|gb|EDS29988.1| bleomycin hydrolase [Culex quinquefasciatus]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 63/74 (85%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEP 60
           +DQ T+ PTK+RVENSWGE++  KGY++MT+ WFKE+VFEVVVD+  VP  VLDVF+  P
Sbjct: 396 VDQNTQRPTKFRVENSWGEDRGEKGYLIMTAEWFKEFVFEVVVDRSIVPQDVLDVFDLPP 455

Query: 61  TILPAWDPMGTLAQ 74
           T+LPAWDPMGTLA+
Sbjct: 456 TVLPAWDPMGTLAK 469

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238112|ref|XP_001814047.1| PREDICTED: similar to CG1440 CG1440-PC [Tribolium castaneum] gi|270008738|gb|EFA05186.1| hypothetical protein TcasGA2_TC015316 [Tribolium castaneum]

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 3   QETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTI 62
            E +E TK RVENSWGE++  KGY++M++ WFKEYVFEVVVDKKYVP  VL+VF Q+P +
Sbjct: 382 NEKDEVTKLRVENSWGEDRGEKGYLIMSTDWFKEYVFEVVVDKKYVPVDVLEVFKQKPIV 441

Query: 63  LPAWDPMGTLAQ 74
           LPAWDPMGTLA 
Sbjct: 442 LPAWDPMGTLAN 453

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117597|ref|XP_001658844.1| bleomycin hydrolase [Aedes aegypti] gi|94469102|gb|ABF18400.1| bleomycin hydrolase [Aedes aegypti] gi|108875988|gb|EAT40213.1| AAEL008041-PB [Aedes aegypti]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 62/74 (83%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEP 60
           +D  T+ PTK+RVENSWGE++  KGY++MT+ WFKE+VFEVVVD+  VP  VLDVF+  P
Sbjct: 382 VDPNTQSPTKFRVENSWGEDRGEKGYLIMTAEWFKEFVFEVVVDRSIVPQDVLDVFDLTP 441

Query: 61  TILPAWDPMGTLAQ 74
           T+LPAWDPMGTLA+
Sbjct: 442 TVLPAWDPMGTLAK 455

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321474511|gb|EFX85476.1| hypothetical protein DAPPUDRAFT_300309 [Daphnia pulex]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 62/73 (84%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEP 60
           +D++T++P KWRVENSWG+++  KGY+L+T  WF+++VFEVVVDK++VP  +L + N EP
Sbjct: 380 LDKDTKQPRKWRVENSWGDDRGEKGYLLITQEWFEQFVFEVVVDKRFVPDDILQICNVEP 439

Query: 61  TILPAWDPMGTLA 73
           T+LPAWDPMG LA
Sbjct: 440 TVLPAWDPMGNLA 452

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490081|ref|XP_003426293.1| PREDICTED: bleomycin hydrolase-like isoform 2 [Nasonia vitripennis]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 57/66 (86%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           +K+RVENSWGE++  KGY+++TS WF E+VFE V+DKK VPA VLDVF Q+P +LPAWDP
Sbjct: 407 SKFRVENSWGEDRGDKGYLVLTSEWFNEFVFEAVIDKKLVPADVLDVFKQDPIVLPAWDP 466

Query: 69  MGTLAQ 74
           MGTLAQ
Sbjct: 467 MGTLAQ 472

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389609585|dbj|BAM18404.1| bleomycin hydrolase [Papilio xuthus]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 60/70 (85%)

Query: 4   ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTIL 63
           E   P K+RVENS+G+++  KGY+L+T+PWFKE+VFEVVVDKK+VP SVL+VF QE  +L
Sbjct: 172 EQGNPLKFRVENSYGDKEYDKGYLLLTTPWFKEFVFEVVVDKKFVPESVLEVFKQEAKVL 231

Query: 64  PAWDPMGTLA 73
           PAWDPMGTLA
Sbjct: 232 PAWDPMGTLA 241

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490079|ref|XP_001599607.2| PREDICTED: bleomycin hydrolase-like isoform 1 [Nasonia vitripennis]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 57/66 (86%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           +K+RVENSWGE++  KGY+++TS WF E+VFE V+DKK VPA VLDVF Q+P +LPAWDP
Sbjct: 391 SKFRVENSWGEDRGDKGYLVLTSEWFNEFVFEAVIDKKLVPADVLDVFKQDPIVLPAWDP 450

Query: 69  MGTLAQ 74
           MGTLAQ
Sbjct: 451 MGTLAQ 456

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|30584035|gb|AAP36266.1| Homo sapiens bleomycin hydrolase [synthetic construct] gi|61371631|gb|AAX43703.1| bleomycin hydrolase [synthetic construct]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 390 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 449

Query: 69  MGTLAQ 74
           MG LA+
Sbjct: 450 MGALAE 455

Source: synthetic construct

Species: synthetic construct

Genus: N/A

Family: N/A

Order: N/A

Class: N/A

Phylum: N/A

>gi|62898367|dbj|BAD97123.1| bleomycin hydrolase variant [Homo sapiens]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 390 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 449

Query: 69  MGTLAQ 74
           MG LA+
Sbjct: 450 MGALAE 455

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|4557367|ref|NP_000377.1| bleomycin hydrolase [Homo sapiens] gi|426348858|ref|XP_004042039.1| PREDICTED: bleomycin hydrolase [Gorilla gorilla gorilla] gi|3023394|sp|Q13867.1|BLMH_HUMAN RecName: Full=Bleomycin hydrolase; Short=BH; Short=BLM hydrolase; Short=BMH gi|1321858|emb|CAA63078.1| bleomycin hydrolase [Homo sapiens] gi|13177661|gb|AAH03616.1| Bleomycin hydrolase [Homo sapiens] gi|30582875|gb|AAP35664.1| bleomycin hydrolase [Homo sapiens] gi|60655031|gb|AAX32079.1| bleomycin hydrolase [synthetic construct] gi|119571609|gb|EAW51224.1| bleomycin hydrolase [Homo sapiens] gi|189053583|dbj|BAG35743.1| unnamed protein product [Homo sapiens] gi|208965884|dbj|BAG72956.1| bleomycin hydrolase [synthetic construct]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 390 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 449

Query: 69  MGTLAQ 74
           MG LA+
Sbjct: 450 MGALAE 455

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
UNIPROTKB|F1RN71	192	LOC100521221 "Uncharacterized	0.972	0.375	0.684	4.2e-24
UNIPROTKB|E7EMN3	368	BLMH "Bleomycin hydrolase" [Ho	0.891	0.179	0.712	8.7e-24
MGI|MGI:1345186	455	Blmh "bleomycin hydrolase" [Mu	0.986	0.160	0.64	1.7e-23
UNIPROTKB|Q13867	455	BLMH "Bleomycin hydrolase" [Ho	0.891	0.145	0.712	2.2e-23
UNIPROTKB|P87362	455	BLMH "Bleomycin hydrolase" [Ga	0.878	0.142	0.707	3.7e-23
RGD|1304668	454	Blmh "bleomycin hydrolase" [Ra	0.959	0.156	0.680	6.2e-23
UNIPROTKB|P70645	454	Blmh "Bleomycin hydrolase" [Ra	0.959	0.156	0.680	6.2e-23
UNIPROTKB|E1BL29	459	BLMH "Uncharacterized protein"	0.878	0.141	0.707	6.5e-23
UNIPROTKB|E2R857	455	BLMH "Uncharacterized protein"	0.878	0.142	0.692	1.4e-22
FB|FBgn0030038	511	CG1440 [Drosophila melanogaste	0.878	0.127	0.676	4.5e-21

UNIPROTKB|F1RN71 LOC100521221 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 50/73 (68%), Positives = 56/73 (76%)

Query:     2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
             DQE    TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QEP 
Sbjct:   121 DQEGAF-TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQEPI 179

Query:    62 ILPAWDPMGTLAQ 74
             +LPAWDPMG LA+
Sbjct:   180 VLPAWDPMGALAE 192

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E7EMN3 BLMH "Bleomycin hydrolase" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query:     9 TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
             TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct:   303 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 362

Query:    69 MGTLAQ 74
             MG LA+
Sbjct:   363 MGALAE 368

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:1345186 Blmh "bleomycin hydrolase" [Mus musculus (taxid:10090)]

 Score = 274 (101.5 bits), Expect = 1.7e-23, P = 1.7e-23
 Identities = 48/75 (64%), Positives = 58/75 (77%)

Query:     2 DQETEEPT--KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQE 59
             +++ +E T  KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QE
Sbjct:   381 EKDNQEGTFVKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQE 440

Query:    60 PTILPAWDPMGTLAQ 74
             P +LPAWDPMG LA+
Sbjct:   441 PIVLPAWDPMGALAE 455

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008152 "metabolic process" evidence=IMP

GO:0008233 "peptidase activity" evidence=IMP

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0042493 "response to drug" evidence=IMP

UNIPROTKB|Q13867 BLMH "Bleomycin hydrolase" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query:     9 TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
             TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct:   390 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 449

Query:    69 MGTLAQ 74
             MG LA+
Sbjct:   450 MGALAE 455

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=TAS

GO:0004180 "carboxypeptidase activity" evidence=TAS

GO:0008234 "cysteine-type peptidase activity" evidence=TAS

GO:0000209 "protein polyubiquitination" evidence=TAS

GO:0002474 "antigen processing and presentation of peptide antigen via MHC class I" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|P87362 BLMH "Bleomycin hydrolase" [Gallus gallus (taxid:9031)]

 Score = 271 (100.5 bits), Expect = 3.7e-23, P = 3.7e-23
 Identities = 46/65 (70%), Positives = 54/65 (83%)

Query:    10 KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPM 69
             KWRVENSWGE++ +KGY++MT  WF EYV+EVVVDKKYVP  VL V  QEP +LPAWDPM
Sbjct:   391 KWRVENSWGEDRGNKGYLIMTDDWFSEYVYEVVVDKKYVPEDVLAVMEQEPIVLPAWDPM 450

Query:    70 GTLAQ 74
             G LA+
Sbjct:   451 GALAK 455

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

RGD|1304668 Blmh "bleomycin hydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 269 (99.8 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 49/72 (68%), Positives = 54/72 (75%)

Query:     2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
             DQE     KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QEP 
Sbjct:   384 DQEGAF-VKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQEPI 442

Query:    62 ILPAWDPMGTLA 73
             +LPAWDPMG LA
Sbjct:   443 VLPAWDPMGALA 454

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008152 "metabolic process" evidence=ISO

GO:0008233 "peptidase activity" evidence=ISO

GO:0009636 "response to toxic substance" evidence=IEA;ISO

GO:0042493 "response to drug" evidence=IEA;ISO

UNIPROTKB|P70645 Blmh "Bleomycin hydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 269 (99.8 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 49/72 (68%), Positives = 54/72 (75%)

Query:     2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
             DQE     KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QEP 
Sbjct:   384 DQEGAF-VKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQEPI 442

Query:    62 ILPAWDPMGTLA 73
             +LPAWDPMG LA
Sbjct:   443 VLPAWDPMGALA 454

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

UNIPROTKB|E1BL29 BLMH "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 269 (99.8 bits), Expect = 6.5e-23, P = 6.5e-23
 Identities = 46/65 (70%), Positives = 52/65 (80%)

Query:    10 KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPM 69
             KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVDKK+VP  VL V  QEP +LPAWDPM
Sbjct:   395 KWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDKKHVPEEVLAVLEQEPIVLPAWDPM 454

Query:    70 GTLAQ 74
             G LA+
Sbjct:   455 GALAK 459

GO:0042493 "response to drug" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E2R857 BLMH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 266 (98.7 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 45/65 (69%), Positives = 52/65 (80%)

Query:    10 KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPM 69
             KWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP +LPAWDPM
Sbjct:   391 KWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIVLPAWDPM 450

Query:    70 GTLAQ 74
             G LA+
Sbjct:   451 GALAK 455

GO:0042493 "response to drug" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

FB|FBgn0030038 CG1440 [Drosophila melanogaster (taxid:7227)]

 Score = 254 (94.5 bits), Expect = 4.5e-21, P = 4.5e-21
 Identities = 44/65 (67%), Positives = 54/65 (83%)

Query:    10 KWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPM 69
             K RVENSWGE++  KGY++M + WF+E+ FEVVVDKKYVP  VL VF+ +P +LPAWDPM
Sbjct:   447 KLRVENSWGEDRGEKGYLVMNADWFREFGFEVVVDKKYVPEDVLRVFDMDPIVLPAWDPM 506

Query:    70 GTLAQ 74
             GTLAQ
Sbjct:   507 GTLAQ 511

GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS

GO:0006508 "proteolysis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P70645	BLMH_RAT	3, ., 4, ., 2, 2, ., 4, 0	0.7076	0.8783	0.1431	yes	N/A
P87362	BLMH_CHICK	3, ., 4, ., 2, 2, ., 4, 0	0.7076	0.8783	0.1428	yes	N/A
Q8R016	BLMH_MOUSE	3, ., 4, ., 2, 2, ., 4, 0	0.64	0.9864	0.1604	yes	N/A
Q13867	BLMH_HUMAN	3, ., 4, ., 2, 2, ., 4, 0	0.7121	0.8918	0.1450	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	74
cd00585	437	cd00585, Peptidase_C1B, Peptidase C1B subfamily (M	6e-33
pfam03051	438	pfam03051, Peptidase_C1_2, Peptidase C1-like famil	9e-32
COG3579	444	COG3579, PepC, Aminopeptidase C [Amino acid transp	3e-26

>gnl|CDD|238328 cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)

 Score =  116 bits (293), Expect = 6e-33
 Identities = 41/67 (61%), Positives = 51/67 (76%)

Query: 4   ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTIL 63
           E  +P KW+VENSWGE+   KGY +M+  WF EYV++VVVDKKY+P  VLD+  QEP +L
Sbjct: 371 EDGKPVKWKVENSWGEKVGKKGYFVMSDDWFDEYVYQVVVDKKYLPEEVLDLLKQEPIVL 430

Query: 64  PAWDPMG 70
           P WDPMG
Sbjct: 431 PPWDPMG 437

The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure with the active sites imbedded in the central channel. The bacterial homolog of BH, called pepC, is a cysteine aminopeptidase possessing broad specificity. Although its crystal structure has not been solved, biochemical analysis shows that pepC also forms a hexamer. . Length = 437

>gnl|CDD|202517 pfam03051, Peptidase_C1_2, Peptidase C1-like family

 Score =  113 bits (285), Expect = 9e-32
 Identities = 39/67 (58%), Positives = 50/67 (74%)

Query: 4   ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTIL 63
           +  +PTKW+VENSWG++   KGY +M+  WF EYV++VVVDKKY+P  VL    QEP +L
Sbjct: 372 DDGKPTKWKVENSWGDDSGKKGYFVMSDEWFDEYVYQVVVDKKYLPEEVLAALEQEPIVL 431

Query: 64  PAWDPMG 70
           P WDPMG
Sbjct: 432 PPWDPMG 438

This family is closely related to the Peptidase_C1 family pfam00112, containing several prokaryotic and eukaryotic aminopeptidases and bleomycin hydrolases. Length = 438

>gnl|CDD|226107 COG3579, PepC, Aminopeptidase C [Amino acid transport and metabolism]

 Score = 98.3 bits (245), Expect = 3e-26
 Identities = 33/71 (46%), Positives = 48/71 (67%)

Query: 4   ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTIL 63
           ET  P +W+VENSWG++   KGY + +  W  EY +++VVDKK++P   L  + +EP +L
Sbjct: 374 ETGNPLRWKVENSWGKDVGKKGYFVASDAWMDEYTYQIVVDKKFLPKEELAAYEEEPIVL 433

Query: 64  PAWDPMGTLAQ 74
             WDPMG LA+
Sbjct: 434 APWDPMGALAK 444

Length = 444

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
COG3579	444	PepC Aminopeptidase C [Amino acid transport and me	100.0
PF03051	438	Peptidase_C1_2: Peptidase C1-like family This fami	100.0
cd00585	437	Peptidase_C1B Peptidase C1B subfamily (MEROPS data	99.97
KOG4128|consensus	457		99.94
cd02619	223	Peptidase_C1 C1 Peptidase family (MEROPS database	98.82
cd02248	210	Peptidase_C1A Peptidase C1A subfamily (MEROPS data	98.67
cd02620	236	Peptidase_C1A_CathepsinB Cathepsin B group; compos	98.67
PF00112	219	Peptidase_C1: Papain family cysteine protease This	98.66
cd02698	239	Peptidase_C1A_CathepsinX Cathepsin X; the only pap	98.61
PTZ00203	348	cathepsin L protease; Provisional	98.59
cd02621	243	Peptidase_C1A_CathepsinC Cathepsin C; also known a	98.55
smart00645	174	Pept_C1 Papain family cysteine protease.	98.51
PTZ00200	448	cysteine proteinase; Provisional	98.5
KOG1542|consensus	372		98.38
KOG1543|consensus	325		98.33
PTZ00021	489	falcipain-2; Provisional	98.24
COG4870	372	Cysteine protease [Posttranslational modification,	98.14
PTZ00364	548	dipeptidyl-peptidase I precursor; Provisional	98.13
PTZ00049	693	cathepsin C-like protein; Provisional	98.11
PTZ00462	1004	Serine-repeat antigen protein; Provisional	98.1
KOG1544|consensus	470		96.63

>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism]

Probab=100.00  E-value=3.3e-35  Score=225.74  Aligned_cols=71  Identities=46%  Similarity=1.102  Sum_probs=69.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhcCCCeeeCCCCccCccCC
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLAQ   74 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~~~p~~l~~wDpmg~l~~   74 (74)
                      ++|+|.|||||||||++.|.+|||+|||+||+||+|||||+|++||+++++++..|||+|+|||||||||.
T Consensus       374 ~~g~p~rwkVENSWG~d~G~~GyfvaSd~wmdEytyQIvV~k~~l~~e~~~a~~~epivL~pWDPMGALA~  444 (444)
T COG3579         374 ETGNPLRWKVENSWGKDVGKKGYFVASDAWMDEYTYQIVVDKKFLPKEELAAYEEEPIVLAPWDPMGALAK  444 (444)
T ss_pred             cCCCceeeEeecccccccCCCceEeehHhHhhhheeEEEEehhhCCHHHHHhhcCCCeecCCCCccccccC
Confidence            67899999999999999999999999999999999999999999999999999999999999999999985

>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=100.00  E-value=3.1e-34  Score=222.27  Aligned_cols=67  Identities=52%  Similarity=1.205  Sum_probs=61.0

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhcCCCeeeCCCCccC
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMG   70 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~~~p~~l~~wDpmg   70 (74)
                      ++|+|++||||||||++.|++|||+||++||++|||+|||||++||++++++|++|||+||||||||
T Consensus       372 ~~g~p~~wkVeNSWG~~~g~kGy~~msd~wf~e~v~~vvV~K~~lp~~~~~~~~~~p~~l~~wdpmg  438 (438)
T PF03051_consen  372 EDGKPVRWKVENSWGTDNGDKGYFYMSDDWFDEYVYQVVVHKKYLPKELLKKLEKEPIVLPPWDPMG  438 (438)
T ss_dssp             TTSSEEEEEEE-SBTTTSTBTTEEEEEHHHHHHHEEEEEEEGGGS-HHHHHHHHS--EEE-TTSCCC
T ss_pred             cCCCeeEEEEEcCCCCCCCCCcEEEECHHHHHhhhheEEechhhCCHHHHHHhcCCCeECCCCCCCC
Confidence            6799999999999999999999999999999999999999999999999999999999999999998

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to MEROPS peptidase family C1, sub-family C1B (bleomycin hydrolase, clan CA). This family contains prokaryotic and eukaryotic aminopeptidases and bleomycin hydrolases.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 3PW3_F 2CB5_A 1CB5_C 2DZZ_A 2E02_A 2E01_A 2E03_A 1A6R_A 1GCB_A 3GCB_A ....

>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)

Probab=99.97  E-value=2.5e-32  Score=211.60  Aligned_cols=67  Identities=61%  Similarity=1.293  Sum_probs=65.2

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhcCCCeeeCCCCccC
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMG   70 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~~~p~~l~~wDpmg   70 (74)
                      ++|+|.||+||||||+++|++|||+||++||++|||+|||||++||++++++|+++||+||||||||
T Consensus       371 ~~g~p~yw~VkNSWG~~~G~~Gy~~ms~~wf~~y~~~ivV~kk~l~~~~~~~l~~~p~~L~~WDpmg  437 (437)
T cd00585         371 EDGKPVKWKVENSWGEKVGKKGYFVMSDDWFDEYVYQVVVDKKYLPEEVLDLLKQEPIVLPPWDPMG  437 (437)
T ss_pred             CCCCcceEEEEcccCCCCCCCcceehhHHHHHhhheEEEeecccCCHHHHHHhcCCCEECCCCCCCC
Confidence            4588889999999999999999999999999999999999999999999999999999999999997

The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure w

>KOG4128|consensus

Probab=99.94  E-value=5.8e-28  Score=185.87  Aligned_cols=73  Identities=53%  Similarity=0.974  Sum_probs=70.3

Q ss_pred             CCCCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhc-CCCeeeCCCCccCccCC
Q psy17192          2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN-QEPTILPAWDPMGTLAQ   74 (74)
Q Consensus         2 d~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~-~~p~~l~~wDpmg~l~~   74 (74)
                      |+.+|-+.+|+||||||++.|++||+.|+++||+||+|+||||.+++|++++.++. +|||+||+||||||||.
T Consensus       384 d~~~g~~~~~rVenswgkd~gkkg~~~mt~ewf~EY~feiVVd~k~vP~evl~~~~~~epi~LPaWDPMGALa~  457 (457)
T KOG4128|consen  384 DPATGGLNEHRVENSWGKDLGKKGVNKMTAEWFREYAFEIVVDEKFVPSEVLHAARIHEPIELPAWDPMGALAN  457 (457)
T ss_pred             CcccCCchhhhhhchhhhhccccchhhhhHHHHHhhheeEEeecccCcHHHHHHhhhcCCeeccccCchhhhcC
Confidence            67889999999999999999999999999999999999999999999999999997 89999999999999984

>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase)

Probab=98.82  E-value=3.7e-09  Score=71.19  Aligned_cols=36  Identities=25%  Similarity=0.396  Sum_probs=32.0

Q ss_pred             CccceEEEecccCCCCCCceEEEEeHHHHhhhceeee
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVV   42 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~iv   42 (74)
                      |+ .+|+|+||||+.+|++||+.|+.+-+.++++...
T Consensus       187 ~~-~~~i~~NSwG~~wg~~Gy~~i~~~~~~~~~~~~~  222 (223)
T cd02619         187 GK-GAFIVKNSWGTDWGDNGYGRISYEDVYEMTFGAN  222 (223)
T ss_pred             CC-CEEEEEeCCCCccccCCEEEEehhhhhhhhhccc
Confidence            55 5999999999999999999999999998887654

Papain-like enzymes are mostly endopeptidases with some exceptions like cathepsins B, C, H and X, which are exopeptidases. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds while mammalian CPs are primarily lysosomal enzymes responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. Bleomycin hydrolase (BH) is a CP that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. It forms a hexameric ring barrel str

>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W)

Probab=98.67  E-value=1.5e-08  Score=68.87  Aligned_cols=25  Identities=40%  Similarity=0.795  Sum_probs=22.5

Q ss_pred             CCccceEEEecccCCCCCCceEEEEe
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMT   30 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms   30 (74)
                      +|+ .+|+|+||||+++|++|||.|+
T Consensus       171 ~~~-~ywiv~NSWG~~WG~~Gy~~i~  195 (210)
T cd02248         171 NGV-DYWIVKNSWGTSWGEKGYIRIA  195 (210)
T ss_pred             CCc-eEEEEEcCCCCccccCcEEEEE
Confidence            354 5999999999999999999997

Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to h

>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag)

Probab=98.67  E-value=1.6e-08  Score=71.72  Aligned_cols=27  Identities=30%  Similarity=0.667  Sum_probs=23.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+++|++|||.++.
T Consensus       196 ~~g~-~YWivrNSWG~~WGe~Gy~ri~~  222 (236)
T cd02620         196 ENGV-PYWLAANSWGTDWGENGYFRILR  222 (236)
T ss_pred             cCCe-eEEEEEeCCCCCCCCCcEEEEEc
Confidence            3565 49999999999999999999974

Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane

>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification

Probab=98.66  E-value=1.2e-08  Score=68.71  Aligned_cols=27  Identities=30%  Similarity=0.704  Sum_probs=22.7

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      .|+ .+|+|+||||+++|++|||.|+..
T Consensus       178 ~~~-~~wiv~NSWG~~WG~~Gy~~i~~~  204 (219)
T PF00112_consen  178 NGK-GYWIVKNSWGTDWGDNGYFRISYD  204 (219)
T ss_dssp             TTE-EEEEEE-SBTTTSTBTTEEEEESS
T ss_pred             cce-eeEeeehhhCCccCCCeEEEEeeC
Confidence            345 599999999999999999999864

; InterPro: IPR000668 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to the peptidase family C1, sub-family C1A (papain family, clan CA). It includes proteins classed as non-peptidase homologs. These are have either been shown experimentally to lack peptidase activity or lack one or more of the active site residues. The papain family has a wide variety of activities, including broad-range (papain) and narrow-range endo-peptidases, aminopeptidases, dipeptidyl peptidases and enzymes with both exo- and endo-peptidase activity []. Members of the papain family are widespread, found in baculovirus [], eubacteria, yeast, and practically all protozoa, plants and mammals []. The proteins are typically lysosomal or secreted, and proteolytic cleavage of the propeptide is required for enzyme activation, although bleomycin hydrolase is cytosolic in fungi and mammals []. Papain-like cysteine proteinases are essentially synthesised as inactive proenzymes (zymogens) with N-terminal propeptide regions. The activation process of these enzymes includes the removal of propeptide regions. The propeptide regions serve a variety of functions in vivo and in vitro. The pro-region is required for the proper folding of the newly synthesised enzyme, the inactivation of the peptidase domain and stabilisation of the enzyme against denaturing at neutral to alkaline pH conditions. Amino acid residues within the pro-region mediate their membrane association, and play a role in the transport of the proenzyme to lysosomes. Among the most notable features of propeptides is their ability to inhibit the activity of their cognate enzymes and that certain propeptides exhibit high selectivity for inhibition of the peptidases from which they originate []. The catalytic residues of papain are Cys-25 and His-159, other important residues being Gln-19, which helps form the 'oxyanion hole', and Asn-175, which orientates the imidazole ring of His-159. ; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MOR_B 3HHI_B 1S4V_A 3F75_A 1MEG_A 1PCI_C 1PPO_A 3HD3_B 1F29_A 1EWL_A ....

>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity

Probab=98.61  E-value=2.9e-08  Score=70.55  Aligned_cols=29  Identities=31%  Similarity=0.693  Sum_probs=25.0

Q ss_pred             CccceEEEecccCCCCCCceEEEEeHHHHh
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTSPWFK   35 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~   35 (74)
                      |+ .+|+|+||||+++|++|||.|+..-+.
T Consensus       193 g~-~YWiikNSWG~~WGe~Gy~~i~rg~~~  221 (239)
T cd02698         193 GV-EYWIVRNSWGEPWGERGWFRIVTSSYK  221 (239)
T ss_pred             CC-EEEEEEcCCCcccCcCceEEEEccCCc
Confidence            66 499999999999999999999865543

It can also act as a carboxydipeptidase, like cathepsin B, but has been shown to preferentially cleave substrates through a monopeptidyl carboxypeptidase pathway. The propeptide region of cathepsin X, the shortest among papain-like peptidases, is covalently attached to the active site cysteine in the inactive form of the enzyme. Little is known about the biological function of cathepsin X. Some studies point to a role in early tumorigenesis. A more recent study indicates that cathepsin X expression is restricted to immune cells suggesting a role in phagocytosis and the regulation of the immune response.

>PTZ00203 cathepsin L protease; Provisional

Probab=98.59  E-value=4.6e-08  Score=74.23  Aligned_cols=27  Identities=44%  Similarity=0.924  Sum_probs=23.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|.+ ||+|+||||+.||++|||.|..
T Consensus       298 ~~g~~-YWiikNSWG~~WGe~GY~ri~r  324 (348)
T PTZ00203        298 TGEVP-YWVIKNSWGEDWGEKGYVRVTM  324 (348)
T ss_pred             CCCce-EEEEEcCCCCCcCcCceEEEEc
Confidence            45654 9999999999999999999964

>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access

Probab=98.55  E-value=5.8e-08  Score=68.80  Aligned_cols=25  Identities=40%  Similarity=0.815  Sum_probs=22.4

Q ss_pred             CccceEEEecccCCCCCCceEEEEeH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |. .+|+|+||||+.+|++|||.|..
T Consensus       202 g~-~YWiirNSWG~~WGe~Gy~~i~~  226 (243)
T cd02621         202 GE-KYWIVKNSWGSSWGEKGYFKIRR  226 (243)
T ss_pred             CC-cEEEEEcCCCCCCCcCCeEEEec
Confidence            55 59999999999999999999963

Each subunit of the tetramer is composed of three peptides: the heavy and light chains, which together adopts the papain fold and forms the catalytic domain; and the residual propeptide region, which forms a beta barrel and points towards the substrate's N-terminus. The subunit composition is the result of the unique characteristic of procathepsin C maturation involving the cleavage of the catalytic domain and the non-autocatalytic excision of an activation peptide within its propeptide region. By removing N-terminal dipeptide extensions, cathepsin C activates granule serine peptidases (granzymes) involved in cell-mediated apoptosis, inflammation and tissue remodelling. Loss-of-function mutations in cathepsin C are assoc

>smart00645 Pept_C1 Papain family cysteine protease

Probab=98.51  E-value=9.1e-08  Score=65.31  Aligned_cols=26  Identities=31%  Similarity=0.755  Sum_probs=23.7

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ +|+|+||||+.+|++|||.|+.
T Consensus       133 ~g~~-yWii~NSwG~~WG~~G~~~i~~  158 (174)
T smart00645      133 NGKD-YWIVKNSWGTDWGENGYFRIAR  158 (174)
T ss_pred             CCee-EEEEECCCCCCcccCeEEEEEc
Confidence            6775 9999999999999999999974

>PTZ00200 cysteine proteinase; Provisional

Probab=98.50  E-value=9e-08  Score=75.04  Aligned_cols=29  Identities=31%  Similarity=0.825  Sum_probs=24.5

Q ss_pred             CCCCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          2 DQETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         2 d~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |.++|. .+|.|+||||++||++|||.|..
T Consensus       398 d~~~g~-~YWIIkNSWG~~WGe~GY~ri~r  426 (448)
T PTZ00200        398 DEKTKK-RYWIIKNSWGTDWGENGYMRLER  426 (448)
T ss_pred             cCCCCC-ceEEEEcCCCCCcccCeeEEEEe
Confidence            345566 49999999999999999999974

>KOG1542|consensus

Probab=98.38  E-value=2e-07  Score=72.24  Aligned_cols=24  Identities=46%  Similarity=0.955  Sum_probs=21.5

Q ss_pred             CccceEEEecccCCCCCCceEEEEe
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMT   30 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms   30 (74)
                      .+| ||.|+||||+.||.+|||.+-
T Consensus       331 ~~P-YWIVKNSWG~~WGE~GY~~l~  354 (372)
T KOG1542|consen  331 EKP-YWIVKNSWGTSWGEKGYYKLC  354 (372)
T ss_pred             CCc-eEEEECCccccccccceEEEe
Confidence            466 999999999999999999873

>KOG1543|consensus

Probab=98.33  E-value=3.6e-07  Score=68.68  Aligned_cols=26  Identities=35%  Similarity=0.749  Sum_probs=22.4

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|. .||.|+||||+.||++|||-|-.
T Consensus       282 ~~~-~YWivkNSWG~~WGe~Gy~ri~r  307 (325)
T KOG1543|consen  282 DGV-DYWIVKNSWGTDWGEKGYFRIAR  307 (325)
T ss_pred             CCc-eeEEEEcCCCCCcccCceEEEec
Confidence            344 49999999999999999999853

>PTZ00021 falcipain-2; Provisional

Probab=98.24  E-value=8.2e-07  Score=70.57  Aligned_cols=23  Identities=35%  Similarity=0.744  Sum_probs=21.4

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+.||++|||.|..
T Consensus       446 ~YWIVKNSWGt~WGE~GY~rI~r  468 (489)
T PTZ00021        446 YYYIIKNSWGESWGEKGFIRIET  468 (489)
T ss_pred             CEEEEECCCCCCcccCeEEEEEc
Confidence            49999999999999999999974

>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones]

Probab=98.14  E-value=1e-06  Score=68.43  Aligned_cols=25  Identities=24%  Similarity=0.644  Sum_probs=22.6

Q ss_pred             ceEEEecccCCCCCCceEEEEeHHH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTSPW   33 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~~w   33 (74)
                      .-|+|+||||+.+|.+|||+||..+
T Consensus       290 GAfiikNSWGt~wG~~GYfwisY~y  314 (372)
T COG4870         290 GAFIIKNSWGTNWGENGYFWISYYY  314 (372)
T ss_pred             ceEEEECccccccccCceEEEEeee
Confidence            4699999999999999999999654

>PTZ00364 dipeptidyl-peptidase I precursor; Provisional

Probab=98.13  E-value=1.9e-06  Score=69.35  Aligned_cols=27  Identities=22%  Similarity=0.430  Sum_probs=23.5

Q ss_pred             CCCccceEEEecccCC--CCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGE--EQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~--~~G~~Gy~~ms~   31 (74)
                      ++|. .||+|+||||+  ++|++|||.|..
T Consensus       415 e~G~-~YWIVKNSWGt~~~WGE~GYfRI~R  443 (548)
T PTZ00364        415 ENGG-DYWLVLDPWGSRRSWCDGGTRKIAR  443 (548)
T ss_pred             CCCc-eEEEEECCCCCCCCcccCCeEEEEc
Confidence            3566 49999999999  999999999964

>PTZ00049 cathepsin C-like protein; Provisional

Probab=98.11  E-value=2.4e-06  Score=70.53  Aligned_cols=27  Identities=26%  Similarity=0.604  Sum_probs=23.2

Q ss_pred             CCcc-ceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEP-TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~-~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ .||.|+||||+.||++|||.|..
T Consensus       633 nG~~~~YWIVRNSWGt~WGenGYfKI~R  660 (693)
T PTZ00049        633 NGKLYKYWIGRNSWGKNWGKEGYFKIIR  660 (693)
T ss_pred             CCcccCEEEEECCCCCCcccCceEEEEc
Confidence            5642 59999999999999999999964

>PTZ00462 Serine-repeat antigen protein; Provisional

Probab=98.10  E-value=2.4e-06  Score=72.73  Aligned_cols=25  Identities=32%  Similarity=0.740  Sum_probs=22.4

Q ss_pred             CccceEEEecccCCCCCCceEEEEeH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |+ .||.|+||||+.||++|||.|..
T Consensus       740 gk-~YWIVRNSWGt~WGEnGYFKI~r  764 (1004)
T PTZ00462        740 KK-SYWIVRNSWGKYWGDEGYFKVDM  764 (1004)
T ss_pred             CC-ceEEEEcCCCCCcCCCeEEEEEe
Confidence            44 49999999999999999999974

>KOG1544|consensus

Probab=96.63  E-value=0.0015  Score=51.43  Aligned_cols=25  Identities=28%  Similarity=0.696  Sum_probs=21.9

Q ss_pred             CCc-cceEEEecccCCCCCCceEEEE
Q psy17192          5 TEE-PTKWRVENSWGEEQNHKGYILM   29 (74)
Q Consensus         5 ~g~-~~~wkVeNSWG~~~G~~Gy~~m   29 (74)
                      +|+ ..+|..-||||+.+|++|||.+
T Consensus       417 ~G~~~KyW~aANSWG~~WGE~GYFri  442 (470)
T KOG1544|consen  417 DGRTLKYWTAANSWGPAWGERGYFRI  442 (470)
T ss_pred             CCCeeEEEEeecccccccccCceEEE
Confidence            454 4789999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	74
1cb5_A	453	Human Bleomycin Hydrolase. Length = 453		2e-24
2cb5_A	453	Human Bleomycin Hydrolase, C73s/dele455 Mutant Leng		2e-24
1a6r_A	471	Gal6 (Yeast Bleomycin Hydrolase) Mutant C73a Length		2e-14
1gcb_A	454	Gal6, Yeast Bleomycin Hydrolase Dna-Binding Proteas		2e-14
3gcb_A	470	Gal6 (Yeast Bleomycin Hydrolase) Mutant C73aDELTAK4		3e-14
2e03_A	457	Crystal Structure Of Nq67e Mutant Of Yeast Bleomyci		3e-14
2e02_A	457	Crystal Structure Of H369l Mutant Of Yeast Bleomyci		3e-14
2e01_A	457	Crystal Structure Of H369a Mutant Of Yeast Bleomyci		3e-14
2dzy_A	457	Crystal Structure Of N392a Mutant Of Yeast Bleomyci		2e-13
2e00_A	457	Crystal Structure Of N392l Mutant Of Yeast Bleomyci		3e-13
2dzz_A	457	Crystal Structure Of N392v Mutant Of Yeast Bleomyci		3e-13

>pdb|1CB5|A Chain A, Human Bleomycin Hydrolase. Length = 453

Iteration: 1
 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 52/65 (80%)
Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 389 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 448
Query: 69  MGTLA 73
           MG LA
Sbjct: 449 MGALA 453

>pdb|2CB5|A Chain A, Human Bleomycin Hydrolase, C73s/dele455 Mutant Length = 453

Iteration: 1
 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 52/65 (80%)
Query: 9   TKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDP 68
           TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP ILPAWDP
Sbjct: 389 TKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDP 448
Query: 69  MGTLA 73
           MG LA
Sbjct: 449 MGALA 453

>pdb|1A6R|A Chain A, Gal6 (Yeast Bleomycin Hydrolase) Mutant C73a Length = 471

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 395 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 454
Query: 58  QEPTILPAWDPMGTLAQ 74
           +EP +LP WDPMG LA+
Sbjct: 455 EEPIVLPIWDPMGALAK 471

>pdb|1GCB|A Chain A, Gal6, Yeast Bleomycin Hydrolase Dna-Binding Protease (Thiol) Length = 454

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 378 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 437
Query: 58  QEPTILPAWDPMGTLAQ 74
           +EP +LP WDPMG LA+
Sbjct: 438 EEPIVLPIWDPMGALAK 454

>pdb|3GCB|A Chain A, Gal6 (Yeast Bleomycin Hydrolase) Mutant C73aDELTAK454 Length = 470

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 395 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 454
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 455 EEPIVLPIWDPMGALA 470

>pdb|2E03|A Chain A, Crystal Structure Of Nq67e Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>pdb|2E02|A Chain A, Crystal Structure Of H369l Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>pdb|2E01|A Chain A, Crystal Structure Of H369a Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>pdb|2DZY|A Chain A, Crystal Structure Of N392a Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVE SWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVEASWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>pdb|2E00|A Chain A, Crystal Structure Of N392l Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVE SWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVELSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>pdb|2DZZ|A Chain A, Crystal Structure Of N392v Mutant Of Yeast Bleomycin Hydrolase Length = 457

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVE SWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVEVSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441
Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	74
2cb5_A	453	Protein (bleomycin hydrolase); aminopeptidase, cys	2e-29
2e01_A	457	Cysteine proteinase 1; bleomycin hydrolase, thiol	3e-28
3pw3_A	383	Aminopeptidase C; bleomycin, cysteine proteinase f	1e-19
2xu3_A	220	Cathepsin L1; hydrolase, drug design, thiol protea	7e-04

>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Length = 453

 Score =  106 bits (266), Expect = 2e-29
 Identities = 48/72 (66%), Positives = 54/72 (75%)

Query: 2   DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
           D +    TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP 
Sbjct: 382 DDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPI 441

Query: 62  ILPAWDPMGTLA 73
           ILPAWDPMG LA
Sbjct: 442 ILPAWDPMGALA 453

>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457

 Score =  103 bits (257), Expect = 3e-28
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 382 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 441

Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 442 EEPIVLPIWDPMGALA 457

>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383

 Score = 79.5 bits (195), Expect = 1e-19
 Identities = 11/59 (18%), Positives = 25/59 (42%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQE 59
           + ++ E    + V+NSWG    + G    +  + +     +VV K  +P ++      +
Sbjct: 325 IAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK 383

>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 11  WRVENSWGEEQNHKGYILM 29
           W V+NSWGEE    GY+ M
Sbjct: 183 WLVKNSWGEEWGMGGYVKM 201

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	74
2cb5_A	453	Protein (bleomycin hydrolase); aminopeptidase, cys	100.0
2e01_A	457	Cysteine proteinase 1; bleomycin hydrolase, thiol	99.97
3pw3_A	383	Aminopeptidase C; bleomycin, cysteine proteinase f	99.85
3ois_A	291	Cysteine protease; alpha and beta, hydrolase; HET:	98.99
3ovx_A	218	Cathepsin S; hydrolase, covalent inhibitor, aldehy	98.85
3i06_A	215	Cruzipain; autocatalytic cleavage, glycoprotein, p	98.84
3f5v_A	222	DER P 1 allergen; allergy, asthma, DUST mites, gly	98.83
3f75_A	224	Toxopain-2, cathepsin L protease; medical structur	98.82
8pch_A	220	Cathepsin H; hydrolase, protease, cysteine protein	98.82
3kwz_A	215	Cathepsin K; enzyme inhibitor, covalent reversible	98.82
3p5u_A	220	Actinidin; SAD, cysteine proteinases, hydrolase; 1	98.81
1m6d_A	214	Cathepsin F, catsf; papain family cysteine proteas	98.77
1cqd_A	221	Protein (protease II); cysteine protease, glycopro	98.76
3u8e_A	222	Papain-like cysteine protease; papain-like cystein	98.75
2xu3_A	220	Cathepsin L1; hydrolase, drug design, thiol protea	98.74
2fo5_A	262	Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst	98.73
1yal_A	218	Chymopapain; hydrolase, thiol protease; 1.70A {Car	98.72
1iwd_A	215	Ervatamin B; cysteine protease, alpha-beta protein	98.72
1ppo_A	216	Protease omega; hydrolase(thiol protease); 1.80A {	98.72
3qsd_A	254	Cathepsin B-like peptidase (C01 family); cysteine	98.71
2b1m_A	246	SPE31; papain-like, sugar binding protein; HET: NA	98.7
3cbj_A	266	Cathepsin B; cathepsin B, occluding loop, chagas d	98.69
1s4v_A	229	Cysteine endopeptidase; KDEL ER retention signal,	98.68
3hhi_A	325	Cathepsin B-like cysteine protease; occluding loop	98.67
1deu_A	277	Procathepsin X; cysteine protease, proregion, pros	98.67
2wbf_X	265	Serine-repeat antigen protein; SERA, malaria, vacu	98.67
3qj3_A	331	Cathepsin L-like protein; hydrolase, proteinase, l	98.65
3pbh_A	317	Procathepsin B; thiol protease, cysteine protease,	98.65
3qt4_A	329	Cathepsin-L-like midgut cysteine proteinase; hydro	98.64
1xkg_A	312	DER P I, major mite fecal allergen DER P 1; major	98.64
2o6x_A	310	Procathepsin L1, secreted cathepsin L 1; hydrolase	98.62
2c0y_A	315	Procathepsin S; proenzyme, proteinase, hydrolase,	98.62
1pci_A	322	Procaricain; zymogen, hydrolase, thiol protease; 3	98.62
3ioq_A	213	CMS1MS2; caricaceae, cysteine protease, papain fam	98.61
1by8_A	314	Protein (procathepsin K); hydrolase(sulfhydryl pro	98.6
2oul_A	241	Falcipain 2; cysteine protease, inhibitor, macromo	98.59
3bwk_A	243	Cysteine protease falcipain-3; malaria, hydrolase;	98.59
1cs8_A	316	Human procathepsin L; prosegment, propeptide, inhi	98.58
3pdf_A	441	Cathepsin C, dipeptidyl peptidase 1; two domains,	98.56
2cio_A	212	Papain; hydrolase/inhibitor, complex hydrolase/inh	98.55
1o0e_A	208	Ervatamin C; plant cysteine protease, two domain,	98.55
2bdz_A	214	Mexicain; cysteine protease, peptidase_C1, papain-	98.55
3tnx_A	363	Papain; hydrolase, cytoplasm for recombinant expre	98.4

>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A

Probab=100.00  E-value=1.5e-33  Score=218.04  Aligned_cols=70  Identities=67%  Similarity=1.231  Sum_probs=68.1

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhcCCCeeeCCCCccCccC
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLA   73 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~~~p~~l~~wDpmg~l~   73 (74)
                      ++|+|.||+||||||+++|++|||+|+++||++|||+|||||++||++++++|+++||+||||||||+||
T Consensus       384 ~~G~~~yWiVkNSWG~~wG~~GY~~ms~~wf~ey~~~vvV~k~~l~~~~~~~l~~~p~~Lp~WDpmg~la  453 (453)
T 2cb5_A          384 QDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA  453 (453)
T ss_dssp             SCSCEEEEEEECSBCTTSTBTTEEEEEHHHHHHHEEEEEEEGGGSCHHHHGGGGSCCEEECTTCSSCCBC
T ss_pred             cCCCccEEEEEcCcCCCcCcCceEEechhhHhhceEEEEechhhCCHHHHHHhcCCCeeCCCCCcccccC
Confidence            3788789999999999999999999999999999999999999999999999999999999999999997

>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A

Probab=99.97  E-value=1.1e-32  Score=213.25  Aligned_cols=70  Identities=47%  Similarity=0.993  Sum_probs=67.8

Q ss_pred             CCCc-cceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhh---cCCCeeeCCCCccCccC
Q psy17192          4 ETEE-PTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVF---NQEPTILPAWDPMGTLA   73 (74)
Q Consensus         4 ~~g~-~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l---~~~p~~l~~wDpmg~l~   73 (74)
                      ++|+ |.||+||||||+++|++|||+|+++||++|+|+|||||++||++++++|   +++||+||||||||+||
T Consensus       384 ~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~wf~ey~~~ivV~k~~lp~~~~~~l~~~~~~p~~Lp~WDpmgala  457 (457)
T 2e01_A          384 ETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGKEEPIVLPIWDPMGALA  457 (457)
T ss_dssp             TTTCCEEEEEEECSSCTTSTBTTEEEEEHHHHHHHEEEEEEEGGGSCHHHHHHHHSTTCCCEEECTTCSSCCBC
T ss_pred             cCCCccCEEEEEeCccCCcCCCceEEeehhhHhhccEEEEechhhCCHHHHHHhhccCCCCeECCCCCcccccC
Confidence            4788 7899999999999999999999999999999999999999999999999   89999999999999997

>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}

Probab=99.85  E-value=6.9e-22  Score=150.35  Aligned_cols=53  Identities=19%  Similarity=0.416  Sum_probs=50.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhc
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN   57 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~   57 (74)
                      ++|++ ||+||||||+++|++|||+|+++||++|||+|||||++||++++++|+
T Consensus       329 ~~g~~-yw~vkNSWg~~~g~~Gy~~m~~~wf~e~~~~ivV~k~~lp~~~~~~l~  381 (383)
T 3pw3_A          329 QEGNE-YYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLG  381 (383)
T ss_dssp             TTCCE-EEEEECSBCSCSTTTTEEEEEHHHHHHHEEEEEEEGGGSCHHHHHHHT
T ss_pred             CCCce-EEEEEeCCCCCCCcCCeEEecHHHHHhhcEEEEechHhCCHHHHHHhc
Confidence            57886 999999999999999999999999999999999999999999999986

>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}

Probab=98.99  E-value=3.7e-10  Score=81.21  Aligned_cols=38  Identities=26%  Similarity=0.565  Sum_probs=31.8

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeHHHHh--hhceeeee
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTSPWFK--EYVFEVVV   43 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~--eyv~~ivV   43 (74)
                      +|+ .+|+|+||||+.+|++|||.|+.+||.  .+..++.+
T Consensus       246 ~~~-~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~~~d~w~  285 (291)
T 3ois_A          246 DEI-RHFRIRNSWGNNVGEDGYFWMPYEYISNTQLADDFWV  285 (291)
T ss_dssp             TTT-TEEEEECSBCTTSTBTTEEEEEHHHHTCTTTEEEEEE
T ss_pred             CCC-CEEEEEeCCCCCCCCCcEEEEEHHHhcCCccceeeEE
Confidence            355 499999999999999999999999997  45666553

>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...

Probab=98.85  E-value=8.4e-10  Score=75.80  Aligned_cols=27  Identities=37%  Similarity=0.747  Sum_probs=23.9

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       175 ~~g~~-ywivkNSWG~~WG~~Gy~~i~~  201 (218)
T 3ovx_A          175 LNGKE-YWLVKNSWGHNFGEEGYIRMAR  201 (218)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCce-EEEEECCCCCccccCCEEEEec
Confidence            45664 9999999999999999999985

>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...

Probab=98.84  E-value=1.6e-09  Score=74.75  Aligned_cols=29  Identities=28%  Similarity=0.681  Sum_probs=24.9

Q ss_pred             CCCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          3 QETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         3 ~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      .++|++ +|+|+||||+++|++|||.|+..
T Consensus       171 ~~~g~~-yWivkNSWG~~WGe~Gy~~i~rg  199 (215)
T 3i06_A          171 DSAAVP-YWIIKNSWTTQWGEEGYIRIAKG  199 (215)
T ss_dssp             SSSSSC-EEEEECSBCTTSTBTTEEEEESS
T ss_pred             ccCCcE-EEEEECCCCCCcccCceEEEecC
Confidence            355664 99999999999999999999753

>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*

Probab=98.83  E-value=1.1e-09  Score=75.64  Aligned_cols=28  Identities=25%  Similarity=0.506  Sum_probs=24.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|++ +|+|+||||+.+|++|||.|+..
T Consensus       180 ~~g~~-ywivkNSWG~~WGe~Gy~~i~r~  207 (222)
T 3f5v_A          180 AQGVD-YWIVRNSWDTNWGDNGYGYFAAN  207 (222)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEECS
T ss_pred             cCCCE-EEEEEcCCCCCcccCCEEEEEcC
Confidence            45664 99999999999999999999854

>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0

Probab=98.82  E-value=1.7e-09  Score=74.34  Aligned_cols=26  Identities=31%  Similarity=0.764  Sum_probs=23.5

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ +|+|+||||+.+|++|||.|+.
T Consensus       180 ~g~~-ywivkNSWG~~WG~~Gy~~i~~  205 (224)
T 3f75_A          180 SKKD-FWIMKNSWGTGWGRDGYMYMAM  205 (224)
T ss_dssp             TTEE-EEEEECSBCTTSTBTTEEEEES
T ss_pred             CCCC-EEEEECCcCcchhhCCEEEEEc
Confidence            5664 9999999999999999999984

>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*

Probab=98.82  E-value=1.3e-09  Score=74.98  Aligned_cols=27  Identities=41%  Similarity=0.855  Sum_probs=23.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       176 ~~g~~-yWivkNSWG~~WGe~Gy~~i~r  202 (220)
T 8pch_A          176 ENGIP-YWIVKNSWGPQWGMNGYFLIER  202 (220)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCee-EEEEECCCCcCcccCCEEEEEc
Confidence            45664 9999999999999999999984

>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...

Probab=98.82  E-value=1.3e-09  Score=74.71  Aligned_cols=27  Identities=44%  Similarity=0.977  Sum_probs=23.7

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+.
T Consensus       172 ~~g~-~yWivkNSWG~~WG~~Gy~~i~r  198 (215)
T 3kwz_A          172 QKGN-KHWIIKNSWGENWGNKGYILMAR  198 (215)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEES
T ss_pred             cCCc-eEEEEECCcCcccccCCEEEEec
Confidence            3566 49999999999999999999974

>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A

Probab=98.81  E-value=1.5e-09  Score=74.95  Aligned_cols=27  Identities=33%  Similarity=0.686  Sum_probs=23.9

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       172 ~~g~~-yWivkNSWG~~WGe~Gy~~i~r  198 (220)
T 3p5u_A          172 EGGID-YWIVKNSWGTTWGEEGYMRIQR  198 (220)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCce-EEEEECCCCCCcccCCEEEEEC
Confidence            45664 9999999999999999999974

>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1

Probab=98.77  E-value=2.2e-09  Score=73.92  Aligned_cols=27  Identities=33%  Similarity=0.884  Sum_probs=23.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       171 ~~g~~-yWivkNSWG~~WGe~Gy~~i~r  197 (214)
T 1m6d_A          171 RSDVP-FWAIKNSWGTDWGEKGYYYLHR  197 (214)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEES
T ss_pred             cCCcE-EEEEEeCCCCCcccCcEEEEEc
Confidence            45664 9999999999999999999975

>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1

Probab=98.76  E-value=2.4e-09  Score=74.22  Aligned_cols=27  Identities=37%  Similarity=0.774  Sum_probs=23.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       171 ~~g~~-yWivkNSWG~~WGe~Gy~~i~r  197 (221)
T 1cqd_A          171 ENDKD-FWIVKNSWGKNWGESGYIRAER  197 (221)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCCc-EEEEEeCCCCCcccCCEEEEEc
Confidence            35664 9999999999999999999985

>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0

Probab=98.75  E-value=3.4e-09  Score=73.32  Aligned_cols=25  Identities=44%  Similarity=0.880  Sum_probs=22.8

Q ss_pred             CccceEEEecccCCCCCCceEEEEeH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |+ .+|+|+||||+.+|++|||.|+.
T Consensus       175 g~-~yWivkNSWG~~WGe~Gy~~i~r  199 (222)
T 3u8e_A          175 NA-DYWIVKNSWGTEWGIDGYILIRR  199 (222)
T ss_dssp             TC-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CC-cEEEEECCCCCCcccCCEEEEEc
Confidence            66 49999999999999999999984

>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...

Probab=98.74  E-value=5.1e-09  Score=72.24  Aligned_cols=27  Identities=41%  Similarity=0.810  Sum_probs=24.0

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       177 ~~g~~-yWivkNSWG~~WG~~Gy~~i~~  203 (220)
T 2xu3_A          177 SDNNK-YWLVKNSWGEEWGMGGYVKMAK  203 (220)
T ss_dssp             SSCCE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCCc-EEEEEeCCCCCcccCcEEEEec
Confidence            45664 9999999999999999999985

>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}

Probab=98.73  E-value=5.3e-09  Score=75.02  Aligned_cols=27  Identities=33%  Similarity=0.746  Sum_probs=24.0

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      +|++ +|+|+||||+++|++|||.|+..
T Consensus       179 ~G~~-YWivkNSWG~~WGe~GY~ri~r~  205 (262)
T 2fo5_A          179 DGKA-YWTVKNSWGPSWGEQGYIRVEKD  205 (262)
T ss_dssp             TSCE-EEEEECSBCTTSTBTTEEEEESS
T ss_pred             CCce-EEEEEeCCCCCCCCCeEEEEEcC
Confidence            4764 99999999999999999999863

>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*

Probab=98.72  E-value=3.8e-09  Score=73.05  Aligned_cols=27  Identities=26%  Similarity=0.556  Sum_probs=23.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~~g~-~yWivkNSWG~~WGe~Gy~~i~~  195 (218)
T 1yal_A          169 SDGK-NYIIIKNSWGPNWGEKGYMRLKR  195 (218)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCc-cEEEEEeCCCCCcccCcEEEEEC
Confidence            3466 49999999999999999999985

>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1

Probab=98.72  E-value=3.8e-09  Score=73.04  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=23.7

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+++|++|||.|+.
T Consensus       168 ~~g~-~yWivkNSWG~~WGe~Gy~~i~~  194 (215)
T 1iwd_A          168 QSGK-NYWIVRNSWGQNWGNQGYIWMER  194 (215)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCc-cEEEEEeCCCCCcCCCcEEEEEc
Confidence            3566 49999999999999999999985

>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*

Probab=98.72  E-value=4.1e-09  Score=72.80  Aligned_cols=27  Identities=30%  Similarity=0.534  Sum_probs=23.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~~g~-~ywivkNSWG~~WG~~Gy~~i~~  195 (216)
T 1ppo_A          169 SGGK-GYILIKNSWGTAWGEKGYIRIKR  195 (216)
T ss_dssp             ETTE-EEEEEECSBCSSSTBTTEEEEEC
T ss_pred             cCCc-cEEEEEeCCCCCcccCcEEEEEc
Confidence            3466 49999999999999999999974

>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*

Probab=98.71  E-value=4.2e-09  Score=74.15  Aligned_cols=27  Identities=33%  Similarity=0.829  Sum_probs=24.0

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       211 ~~g~~-ywivkNSWG~~WG~~Gy~~i~r  237 (254)
T 3qsd_A          211 ENKAP-YWLIANSWNEDWGENGYFRIVR  237 (254)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCee-EEEEEeCCCCCcccCCeEEEEc
Confidence            45664 9999999999999999999985

>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*

Probab=98.70  E-value=4.9e-09  Score=74.02  Aligned_cols=26  Identities=35%  Similarity=0.717  Sum_probs=23.4

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|+ .+|+|+||||+.+|++|||.|+.
T Consensus       179 ~g~-~yWivkNSWG~~WGe~Gy~~i~~  204 (246)
T 2b1m_A          179 DGV-DYWIAKNSWGEDWGIDGYIRIQR  204 (246)
T ss_dssp             TTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCc-eEEEEEeCCCCcccCCcEEEEEc
Confidence            566 49999999999999999999975

>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...

Probab=98.69  E-value=5.2e-09  Score=74.23  Aligned_cols=27  Identities=30%  Similarity=0.714  Sum_probs=24.0

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       215 ~~g~~-yWivkNSWG~~WGe~Gy~~i~r  241 (266)
T 3cbj_A          215 ENGTP-YWLVANSWNTDWGDNGFFKILR  241 (266)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCce-EEEEEcCCCCccCCCCEEEEEc
Confidence            45664 9999999999999999999975

>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1

Probab=98.68  E-value=9.3e-09  Score=71.67  Aligned_cols=26  Identities=46%  Similarity=0.840  Sum_probs=23.4

Q ss_pred             CccceEEEecccCCCCCCceEEEEeHH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      |+ .+|+|+||||+.+|++|||.|+..
T Consensus       175 g~-~yWivkNSWG~~WGe~Gy~~i~r~  200 (229)
T 1s4v_A          175 GT-KYWTVKNSWGPEWGEKGYIRMERG  200 (229)
T ss_dssp             SC-EEEEEECSBCTTSTBTTEEEEECS
T ss_pred             CC-CEEEEEeCCCCCccCCcEEEEEcC
Confidence            66 499999999999999999999853

>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*

Probab=98.67  E-value=7.8e-09  Score=76.08  Aligned_cols=28  Identities=32%  Similarity=0.767  Sum_probs=24.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|++ +|+|+||||+.+|++|||.|+..
T Consensus       270 ~~g~~-YWivkNSWG~~WGe~GY~~i~rg  297 (325)
T 3hhi_A          270 SNGVP-YWKIANSWNTEWGMDGYFLIRRG  297 (325)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEECS
T ss_pred             cCCce-EEEEEeCCCCCcccCCEEEEEcC
Confidence            46764 99999999999999999999853

>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A

Probab=98.67  E-value=6.5e-09  Score=74.60  Aligned_cols=27  Identities=30%  Similarity=0.722  Sum_probs=23.8

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      +|++ +|+|+||||+.+|++|||.|+..
T Consensus       226 ~g~~-YWivkNSWG~~WGe~GY~~i~rg  252 (277)
T 1deu_A          226 DGTE-YWIVRNSWGEPWGERGWLRIVTS  252 (277)
T ss_dssp             TTEE-EEEEECSBCTTSTBTTEEEEECT
T ss_pred             CCcc-EEEEEeCCCCccCCCcEEEEEcC
Confidence            5664 99999999999999999999853

>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X

Probab=98.67  E-value=1.1e-08  Score=71.97  Aligned_cols=26  Identities=35%  Similarity=0.704  Sum_probs=22.8

Q ss_pred             CCc-cceEEEecccCCCCCCceEEEEe
Q psy17192          5 TEE-PTKWRVENSWGEEQNHKGYILMT   30 (74)
Q Consensus         5 ~g~-~~~wkVeNSWG~~~G~~Gy~~ms   30 (74)
                      +|. ..+|+|+||||+.+|++|||.|+
T Consensus       214 ~g~~~~YWivkNSWG~~WGe~GY~ri~  240 (265)
T 2wbf_X          214 EGEKKSYWIVRNSWGPYWGDEGYFKVD  240 (265)
T ss_dssp             TSCEEEEEEEECSBCTTSTBTTEEEEE
T ss_pred             CCCcCCEEEEEcCCCCccCCCCEEEEE
Confidence            552 35999999999999999999997

>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0

Probab=98.65  E-value=8.3e-09  Score=76.09  Aligned_cols=27  Identities=33%  Similarity=0.741  Sum_probs=23.9

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       288 ~~g~~-yWivkNSWG~~WGe~GY~~i~r  314 (331)
T 3qj3_A          288 ENGQD-YWLVKNSWGDGWGLDGYFKIAR  314 (331)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCce-EEEEEcCCCCCcCCCCEEEEEc
Confidence            45664 9999999999999999999984

>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A

Probab=98.65  E-value=1.1e-08  Score=74.90  Aligned_cols=27  Identities=30%  Similarity=0.714  Sum_probs=24.0

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       272 ~~g~~-YWivkNSWG~~WGe~GY~ri~r  298 (317)
T 3pbh_A          272 ENGTP-YWLVANSWNTDWGDNGFFKILR  298 (317)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             eCCee-EEEEEcCCCCCcCCCcEEEEEc
Confidence            45764 9999999999999999999975

>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}

Probab=98.64  E-value=8.7e-09  Score=76.14  Aligned_cols=27  Identities=26%  Similarity=0.614  Sum_probs=23.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       286 ~~g~~-yWivkNSWG~~WGe~GY~~i~r  312 (329)
T 3qt4_A          286 DNGQD-YWILKNSWGSGWGESGYWRQVR  312 (329)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEES
T ss_pred             eCCcc-EEEEEeCCCCcccCCcEEEEEe
Confidence            35664 9999999999999999999984

>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1

Probab=98.64  E-value=9.4e-09  Score=75.38  Aligned_cols=28  Identities=25%  Similarity=0.506  Sum_probs=24.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|++ +|+|+||||+.+|++|||.|+..
T Consensus       260 ~~g~~-yWivkNSWG~~WGe~GY~~i~r~  287 (312)
T 1xkg_A          260 AQGVD-YWIVRNSWDTNWGDNGYGYFAAN  287 (312)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEECS
T ss_pred             cCCce-EEEEEeCCCCcccCCcEEEEEcC
Confidence            35664 99999999999999999999864

>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}

Probab=98.62  E-value=1.2e-08  Score=74.48  Aligned_cols=27  Identities=37%  Similarity=0.692  Sum_probs=23.9

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      +|++ +|+|+||||+.+|++|||.|+..
T Consensus       264 ~g~~-yWivkNSWG~~WGe~GY~~i~r~  290 (310)
T 2o6x_A          264 GGTD-YWIVKNSWGLSWGERGYIRMVRN  290 (310)
T ss_dssp             TTEE-EEEEECSBCTTSTBTTEEEEECS
T ss_pred             CCce-EEEEEeCCCCccCCCcEEEEEcC
Confidence            5664 99999999999999999999853

>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}

Probab=98.62  E-value=1.6e-08  Score=73.86  Aligned_cols=26  Identities=38%  Similarity=0.811  Sum_probs=23.6

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ +|+|+||||+.+|++|||.|+.
T Consensus       273 ~g~~-yWivkNSWG~~WGe~GY~~i~r  298 (315)
T 2c0y_A          273 NGKE-YWLVKNSWGHNFGEEGYIRMAR  298 (315)
T ss_dssp             TTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCc-EEEEEcCCCCCcCCCcEEEEEc
Confidence            5664 9999999999999999999985

>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1

Probab=98.62  E-value=1.2e-08  Score=74.92  Aligned_cols=27  Identities=30%  Similarity=0.528  Sum_probs=23.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|++ +|+|+||||+.+|++|||.|+.
T Consensus       275 ~~g~~-yWivkNSWG~~WGe~GY~~i~r  301 (322)
T 1pci_A          275 SGGKG-YILIKNSWGTAWGEKGYIRIKR  301 (322)
T ss_dssp             ETTEE-EEEEECSBCSSSTBTTEEEEEC
T ss_pred             cCCcc-EEEEEeCCCCcccCCeEEEEEc
Confidence            35664 9999999999999999999974

>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1

Probab=98.61  E-value=1.8e-08  Score=69.25  Aligned_cols=23  Identities=30%  Similarity=0.576  Sum_probs=21.6

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~yWivkNSWG~~WGe~Gy~~i~r  191 (213)
T 3ioq_A          169 DYILIKNSWGTGWGEGGYIRIKR  191 (213)
T ss_dssp             TEEEEECSBCTTSTBTTEEEEES
T ss_pred             CeEEEECCCCCCcccCCeEEEEc
Confidence            48999999999999999999984

>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A

Probab=98.60  E-value=2e-08  Score=73.43  Aligned_cols=26  Identities=46%  Similarity=0.984  Sum_probs=23.5

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ +|+|+||||+.+|++|||.|+.
T Consensus       272 ~g~~-yWivkNSWG~~WGe~GY~~i~r  297 (314)
T 1by8_A          272 KGNK-HWIIKNSWGENWGNKGYILMAR  297 (314)
T ss_dssp             TTEE-EEEEECSBTTTSTBTTEEEECC
T ss_pred             CCce-EEEEEcCCCCCcCcCCEEEEEc
Confidence            5664 9999999999999999999985

>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A

Probab=98.59  E-value=1.4e-08  Score=71.22  Aligned_cols=25  Identities=24%  Similarity=0.683  Sum_probs=22.5

Q ss_pred             CccceEEEecccCCCCCCceEEEEeH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |+ .+|+|+||||+.+|++|||.|+.
T Consensus       196 g~-~yWivkNSWG~~WGe~Gy~~i~~  220 (241)
T 2oul_A          196 KH-YYYIIKNSWGQQWGERGFINIET  220 (241)
T ss_dssp             EE-EEEEEECSBCTTSTBTTEEEEEE
T ss_pred             CC-CEEEEEeCCCCCcccCCEEEEEc
Confidence            44 49999999999999999999974

>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*

Probab=98.59  E-value=1.5e-08  Score=71.16  Aligned_cols=25  Identities=28%  Similarity=0.609  Sum_probs=22.5

Q ss_pred             CccceEEEecccCCCCCCceEEEEeH
Q psy17192          6 EEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         6 g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      |+ .+|+|+||||+.+|++|||.|+.
T Consensus       198 g~-~yWivkNSWG~~WGe~Gy~~i~~  222 (243)
T 3bwk_A          198 KF-YYYIIKNSWGSDWGEGGYINLET  222 (243)
T ss_dssp             EE-EEEEEECSBCTTSTBTTEEEEEE
T ss_pred             CC-CEEEEEeCCCCCcCCCcEEEEEc
Confidence            44 49999999999999999999974

>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*

Probab=98.58  E-value=2.3e-08  Score=73.08  Aligned_cols=26  Identities=42%  Similarity=0.838  Sum_probs=23.6

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +|++ +|+|+||||+.+|++|||.|+.
T Consensus       274 ~g~~-yWivkNSWG~~WGe~GY~~i~r  299 (316)
T 1cs8_A          274 DNNK-YWLVKNSWGEEWGMGGYVKMAK  299 (316)
T ss_dssp             CCEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCc-EEEEEcCCCCCcccCCEEEEEC
Confidence            5764 9999999999999999999975

>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*

Probab=98.56  E-value=3.5e-08  Score=75.66  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=24.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|++ +|.|+||||+.+|++|||.|+..
T Consensus       393 ~~G~~-YWIVkNSWG~~WGe~GYfri~rg  420 (441)
T 3pdf_A          393 ASGMD-YWIVKNSWGTGWGENGYFRIRRG  420 (441)
T ss_dssp             TTCCE-EEEEECSBCTTSTBTTEEEEECS
T ss_pred             CCCce-EEEEEcCCCCCcCCCeEEEEEcC
Confidence            46775 99999999999999999999753

>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...

Probab=98.55  E-value=3.2e-08  Score=68.16  Aligned_cols=23  Identities=30%  Similarity=0.611  Sum_probs=21.5

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~yWivkNSWG~~WGe~Gy~~i~~  191 (212)
T 2cio_A          169 NYILIKNSWGTGWGENGYIRIKR  191 (212)
T ss_dssp             TEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CeEEEEeCCCCCcccCcEEEEEc
Confidence            48999999999999999999974

>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*

Probab=98.55  E-value=3.2e-08  Score=68.10  Aligned_cols=23  Identities=48%  Similarity=0.852  Sum_probs=21.6

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+++|++|||.|+.
T Consensus       167 ~yWivkNSWG~~WGe~Gy~~i~~  189 (208)
T 1o0e_A          167 NYWIVRNSWGRYWGEKGYIRMLR  189 (208)
T ss_dssp             SEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CeEEEEcCCCCcccCCcEEEEEc
Confidence            48999999999999999999975

>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}

Probab=98.55  E-value=3.3e-08  Score=68.28  Aligned_cols=23  Identities=39%  Similarity=0.690  Sum_probs=21.6

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~yWivkNSWG~~WGe~Gy~~i~~  191 (214)
T 2bdz_A          169 TYLLLKNSWGPNWGEKGYIRIKR  191 (214)
T ss_dssp             SEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CeEEEEeCCCCCcccCCEEEEEc
Confidence            48999999999999999999975

>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}

Probab=98.40  E-value=1.2e-07  Score=71.25  Aligned_cols=23  Identities=30%  Similarity=0.599  Sum_probs=21.2

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .||.|+||||+.||++|||.|..
T Consensus       320 ~YWIVKNSWGt~WGe~GY~rI~R  342 (363)
T 3tnx_A          320 NYILIRNSWGTGWGENGYIRIKR  342 (363)
T ss_dssp             TEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CcEEEEeCCCCccccCcEEEEEc
Confidence            49999999999999999999963

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	74
d2cb5a_	453	d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi	1e-34
d3gcba_	458	d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S	2e-33

>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Bleomycin hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 1e-34
 Identities = 48/72 (66%), Positives = 54/72 (75%)

Query: 2   DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPT 61
           D +    TKWRVENSWGE+  HKGY+ MT  WF EYV+EVVVD+K+VP  VL V  QEP 
Sbjct: 382 DDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPI 441

Query: 62  ILPAWDPMGTLA 73
           ILPAWDPMG LA
Sbjct: 442 ILPAWDPMGALA 453

>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Bleomycin hydrolase
species: Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]

 Score =  116 bits (292), Expect = 2e-33
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 1   MDQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN--- 57
           +D+ ++ P ++RVENSWG++    G  +MT  +F+EY F++VVD   +P  +   F    
Sbjct: 383 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGK 442

Query: 58  QEPTILPAWDPMGTLA 73
           +EP +LP WDPMG LA
Sbjct: 443 EEPIVLPIWDPMGALA 458

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	74
d2cb5a_	453	Bleomycin hydrolase {Human (Homo sapiens) [TaxId:	100.0
d3gcba_	458	Bleomycin hydrolase {Baker's yeast (Saccharomyces	100.0
d1me4a_	215	Cruzain {Trypanosoma cruzi [TaxId: 5693]}	98.86
d1xkga1	302	Major mite fecal allergen der p 1 {House-dust mite	98.86
d2h7ja1	217	(Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960	98.85
d1m6da_	214	Cathepsin F {Human (Homo sapiens) [TaxId: 9606]}	98.84
d1fh0a_	221	(Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960	98.83
d1aeca_	218	Actinidin {Chinese gooseberry or kiwifruit (Actini	98.83
d1gmya_	254	(Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960	98.82
d1yala_	218	Chymopapain {Papaya (Carica papaya) [TaxId: 3649]}	98.8
d2r6na1	215	(Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960	98.78
d1ppoa_	216	Caricain (protease omega) {Papaya (Carica papaya)	98.77
d1s4va_	224	Vignain (bean endopeptidase) {Castor bean (Ricinus	98.77
g8pch.1	228	Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]}	98.76
d1iwda_	215	Ervatamin B {Adam's apple (Ervatamia coronaria) [T	98.76
g1k3b.1	233	Cathepsin C (dipeptidyl peptidase I), catalytic do	98.76
d1cqda_	216	Proline-specific cysteine protease {Ginger rhizome	98.72
d1deua_	275	(Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960	98.72
d1cs8a_	316	(Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960	98.72
d1khqa_	212	Papain {Papaya (Carica papaya) [TaxId: 3649]}	98.71
d1o0ea_	208	Ervatamin C {East indian rosebay (Ervatamia corona	98.71
d2oula1	241	Falcipain 2 {Plasmodium falciparum [TaxId: 5833]}	98.59

>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Bleomycin hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=235.42  Aligned_cols=72  Identities=67%  Similarity=1.222  Sum_probs=70.3

Q ss_pred             CCCCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhcCCCeeeCCCCccCccC
Q psy17192          2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFNQEPTILPAWDPMGTLA   73 (74)
Q Consensus         2 d~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~~~p~~l~~wDpmg~l~   73 (74)
                      |+++|+++|||||||||++.|++|||+||++||++|||+|||||++||++++++|+++||+|||||||||||
T Consensus       382 dd~~G~~~~w~VENSWG~~~g~kGy~~Msd~WF~eyv~eivV~K~~lp~~i~~~l~~~p~~Lp~WDpmGaLA  453 (453)
T d2cb5a_         382 DDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA  453 (453)
T ss_dssp             TTSCSCEEEEEEECSBCTTSTBTTEEEEEHHHHHHHEEEEEEEGGGSCHHHHGGGGSCCEEECTTCSSCCBC
T ss_pred             cccCCCEeEEEEEccccCcCCCCceEEecHHHHHhccEEEEEEhhhCCHHHHHHhcCCCeECCCCCCccccC
Confidence            468999999999999999999999999999999999999999999999999999999999999999999998

>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Bleomycin hydrolase
species: Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]

Probab=100.00  E-value=1.6e-35  Score=227.23  Aligned_cols=72  Identities=44%  Similarity=0.959  Sum_probs=67.1

Q ss_pred             CCCCCccceEEEecccCCCCCCceEEEEeHHHHhhhceeeeecCCCCCHHHHhhhc---CCCeeeCCCCccCccC
Q psy17192          2 DQETEEPTKWRVENSWGEEQNHKGYILMTSPWFKEYVFEVVVDKKYVPASVLDVFN---QEPTILPAWDPMGTLA   73 (74)
Q Consensus         2 d~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~wF~eyv~~ivV~K~~l~~~~~~~l~---~~p~~l~~wDpmg~l~   73 (74)
                      |..+++|++||||||||+++|++|||+||++||++|||+|||||++||++++++|+   ++||+||||||||+||
T Consensus       384 D~~g~~~~~w~VeNSWG~~~g~~Gy~~msd~WF~eyv~eivV~K~~l~~~i~~~l~~~~~~pi~Lp~WDpmGaLA  458 (458)
T d3gcba_         384 DETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGKEEPIVLPIWDPMGALA  458 (458)
T ss_dssp             CTTTCSEEEEEEECSBCTTSTBTTEEEEEHHHHHHHEEEEEEEGGGSCHHHHHHHHSSCCCCEEECTTCSSCCBC
T ss_pred             cCCCCccceEEEEeccCCCCCCCceEEecHHHHHhccEEEEEEhhhCCHHHHHHHhhCcCCCeeCCCCCcccccC
Confidence            43444689999999999999999999999999999999999999999999999995   5999999999999998

>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Cruzain
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.86  E-value=5.4e-10  Score=73.43  Aligned_cols=28  Identities=29%  Similarity=0.724  Sum_probs=24.3

Q ss_pred             CCCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          3 QETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         3 ~~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .++|++ +|+|+||||+++|++|||.|+.
T Consensus       171 ~~~~~~-ywivrNSWG~~WGd~Gy~~i~~  198 (215)
T d1me4a_         171 DSAAVP-YWIIKNSWTTQWGEEGYIRIAK  198 (215)
T ss_dssp             SSSSSC-EEEEECSBCTTSTBTTEEEEES
T ss_pred             ccCCce-EEEEEcCCCCCcccCCEEEEEC
Confidence            455665 9999999999999999999974

>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Major mite fecal allergen der p 1
species: House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]

Probab=98.86  E-value=3.1e-10  Score=79.87  Aligned_cols=41  Identities=24%  Similarity=0.540  Sum_probs=31.9

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH----HHhhhceeeeecC
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP----WFKEYVFEVVVDK   45 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~----wF~eyv~~ivV~K   45 (74)
                      ++|++ +|+|+||||+.||++|||.|+..    =+..|.|.++|..
T Consensus       257 ~~g~~-YWivkNSWG~~WGe~GY~~i~~~~n~cgi~~~~~~~~~~~  301 (302)
T d1xkga1         257 AQGVD-YWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVILGQ  301 (302)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEECTT
T ss_pred             cCCeE-EEEEEcCCCCchhcCCEEEEECCCCeeccCCCcEEEEecC
Confidence            45664 99999999999999999999753    2556667666653

>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin S
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4e-10  Score=73.79  Aligned_cols=27  Identities=37%  Similarity=0.747  Sum_probs=23.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+. +|+|+||||+.+|++|||.|+.
T Consensus       174 ~~~~~-ywivrNSWG~~WG~~Gy~~i~~  200 (217)
T d2h7ja1         174 LNGKE-YWLVKNSWGHNFGEEGYIRMAR  200 (217)
T ss_dssp             ETTEE-EEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCce-EEEEEcCCCCCcccCCEEEEec
Confidence            45554 8999999999999999999983

>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Cathepsin F
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=4.9e-10  Score=73.75  Aligned_cols=28  Identities=29%  Similarity=0.744  Sum_probs=23.7

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+..
T Consensus       171 ~~~~-~ywivkNSWG~~WGd~Gy~~i~~g  198 (214)
T d1m6da_         171 RSDV-PFWAIKNSWGTDWGEKGYYYLHRG  198 (214)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEESS
T ss_pred             cCCc-eEEEEECCCCCccccCCEEEEEcC
Confidence            3444 489999999999999999999753

>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin V
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1e-09  Score=71.84  Aligned_cols=27  Identities=33%  Similarity=0.774  Sum_probs=23.3

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+ .+|+|+||||+.+|++|||.++.
T Consensus       178 ~~~~-~ywivrNSWG~~WGd~Gy~~i~~  204 (221)
T d1fh0a_         178 SDNS-KYWLVKNSWGPEWGSNGYVKIAK  204 (221)
T ss_dssp             TTSS-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCc-eEEEEEeCCCCCcccCCEEEEEe
Confidence            3455 48999999999999999999984

>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Actinidin
species: Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]

Probab=98.83  E-value=5.6e-10  Score=73.32  Aligned_cols=26  Identities=31%  Similarity=0.624  Sum_probs=22.8

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEe
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMT   30 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms   30 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+
T Consensus       172 ~~~~-~ywivrNSWG~~WGd~Gy~~i~  197 (218)
T d1aeca_         172 EGGI-DYWIVKNSWDTTWGEEGYMRIL  197 (218)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEE
T ss_pred             cCCe-EEEEEEcCCCCCcccCCEEEEE
Confidence            3455 4899999999999999999997

>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.7e-10  Score=74.77  Aligned_cols=27  Identities=26%  Similarity=0.622  Sum_probs=23.3

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+++|++|||.|+.
T Consensus       210 ~~g~-~ywIvkNSWG~~WGd~GYf~i~~  236 (254)
T d1gmya_         210 ENGT-PYWLVANSWNTDWGDNGFFKILR  236 (254)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCc-eEEEEEcCCCCCcCCCceEEEEc
Confidence            3455 48999999999999999999973

>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Chymopapain
species: Papaya (Carica papaya) [TaxId: 3649]

Probab=98.80  E-value=7.4e-10  Score=73.04  Aligned_cols=27  Identities=26%  Similarity=0.556  Sum_probs=23.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+.
T Consensus       169 ~~g~-~ywivkNSWG~~WGd~Gy~~I~~  195 (218)
T d1yala_         169 SDGK-NYIIIKNSWGPNWGEKGYMRLKR  195 (218)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCc-eEEEEECCCCCCcccCCEEEEEc
Confidence            3455 49999999999999999999974

>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=9.4e-10  Score=72.41  Aligned_cols=26  Identities=46%  Similarity=0.993  Sum_probs=22.8

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .++ .+|+|+||||+.+|++|||.|+.
T Consensus       173 ~~~-~ywivrNSWG~~WGe~Gy~~i~~  198 (215)
T d2r6na1         173 KGN-KHWIIKNSWGENWGNKGYILMAR  198 (215)
T ss_dssp             TTE-EEEEEECSBCTTSTBTTEEEEES
T ss_pred             CCC-cEEEEEcCCCCCcccCCeEEEEe
Confidence            344 48999999999999999999984

>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Caricain (protease omega)
species: Papaya (Carica papaya) [TaxId: 3649]

Probab=98.77  E-value=1.1e-09  Score=71.96  Aligned_cols=26  Identities=31%  Similarity=0.552  Sum_probs=22.9

Q ss_pred             CCccceEEEecccCCCCCCceEEEEeH
Q psy17192          5 TEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         5 ~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      +++ .+|+|+||||+.+|++|||.|+.
T Consensus       170 ~~~-~ywivrNSWG~~WGd~Gy~~i~~  195 (216)
T d1ppoa_         170 GGK-GYILIKNSWGTAWGEKGYIRIKR  195 (216)
T ss_dssp             TTE-EEEEEECSBCSSSTBTTEEEEEC
T ss_pred             CCC-ceEEEECCCCCCcccCCEEEEEc
Confidence            444 48999999999999999999974

>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Vignain (bean endopeptidase)
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=98.77  E-value=1.7e-09  Score=71.06  Aligned_cols=27  Identities=44%  Similarity=0.795  Sum_probs=23.5

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+ .+|+|+||||+++|++|||.|+.
T Consensus       173 ~~g~-~ywiikNSWG~~WG~~Gy~~i~~  199 (224)
T d1s4va_         173 IDGT-KYWTVKNSWGPEWGEKGYIRMER  199 (224)
T ss_dssp             TTSC-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cCCc-eEEEEEcCCCCccccCceEEEEC
Confidence            3555 49999999999999999999974

>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Ervatamin B
species: Adam's apple (Ervatamia coronaria) [TaxId: 52861]

Probab=98.76  E-value=1.2e-09  Score=71.76  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=23.1

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++|+ .+|+|+||||+.+|++|||.|+.
T Consensus       168 ~~~~-~ywiirNSWG~~WGd~Gy~~I~~  194 (215)
T d1iwda_         168 QSGK-NYWIVRNSWGQNWGNQGYIWMER  194 (215)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCc-eEEEEECCCCcccccCCEEEEEC
Confidence            3445 59999999999999999999973

>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Proline-specific cysteine protease
species: Ginger rhizome (Zingiber officinale) [TaxId: 94328]

Probab=98.72  E-value=1.9e-09  Score=70.45  Aligned_cols=27  Identities=37%  Similarity=0.783  Sum_probs=23.3

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      ++++ .+|+|+||||+++|++|||.++.
T Consensus       169 ~~~~-~~wiv~NSWG~~WGd~Gy~~i~~  195 (216)
T d1cqda_         169 ENDK-DFWIVKNSWGKNWGESGYIRAER  195 (216)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             ccCC-ceEEEECCCCCccccCCEEEEEc
Confidence            3455 49999999999999999999983

>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.8e-09  Score=73.63  Aligned_cols=28  Identities=29%  Similarity=0.704  Sum_probs=23.9

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeHH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTSP   32 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~~   32 (74)
                      ++|+ .+|+|+||||+++|++|||.|+..
T Consensus       223 ~~g~-~ywivrNSWG~~WGd~Gyf~I~~~  250 (275)
T d1deua_         223 SDGT-EYWIVRNSWGEPWGERGWLRIVTS  250 (275)
T ss_dssp             ETTE-EEEEEECSBCTTSTBTTEEEEECT
T ss_pred             cCCc-EEEEEECCCCCCcccCCEEEEECC
Confidence            3455 489999999999999999999754

>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.1e-09  Score=74.74  Aligned_cols=27  Identities=41%  Similarity=0.818  Sum_probs=23.6

Q ss_pred             CCCccceEEEecccCCCCCCceEEEEeH
Q psy17192          4 ETEEPTKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         4 ~~g~~~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+ .+|.|+||||+++|++|||.|+.
T Consensus       273 ~~g~-~YWIikNSWG~~WGe~GY~ri~r  299 (316)
T d1cs8a_         273 SDNN-KYWLVKNSWGEEWGMGGYVKMAK  299 (316)
T ss_dssp             SCCE-EEEEEECSBCTTSTBTTEEEEEC
T ss_pred             CCCC-eEEEEEeCCCCCcccCCEEEEee
Confidence            3566 49999999999999999999974

>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Papain
species: Papaya (Carica papaya) [TaxId: 3649]

Probab=98.71  E-value=2.8e-09  Score=69.11  Aligned_cols=23  Identities=30%  Similarity=0.611  Sum_probs=21.4

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+++|++|||.|+.
T Consensus       169 ~ywivrNSWG~~WGd~Gy~~i~~  191 (212)
T d1khqa_         169 NYILIKNSWGTGWGENGYIRIKR  191 (212)
T ss_dssp             TEEEEECSBCTTSTBTTEEEEEC
T ss_pred             cEEEEEcCCCCCcccCCEEEEEc
Confidence            48999999999999999999974

>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Ervatamin C
species: East indian rosebay (Ervatamia coronaria) [TaxId: 52861]

Probab=98.71  E-value=3e-09  Score=69.30  Aligned_cols=23  Identities=48%  Similarity=0.852  Sum_probs=21.4

Q ss_pred             ceEEEecccCCCCCCceEEEEeH
Q psy17192          9 TKWRVENSWGEEQNHKGYILMTS   31 (74)
Q Consensus         9 ~~wkVeNSWG~~~G~~Gy~~ms~   31 (74)
                      .+|+|+||||+.+|++|||.|+.
T Consensus       167 ~ywiirNSWG~~WGd~Gy~~I~~  189 (208)
T d1o0ea_         167 NYWIVRNSWGRYWGEKGYIRMLR  189 (208)
T ss_dssp             SEEEEECSBCTTSTBTTEEEEEC
T ss_pred             ceEEEECCCCCCcccCCeEEEEc
Confidence            38999999999999999999983